Clc10G04770 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G04770
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NADH-ubiquinone oxidoreductase chain 4
Location	ClcChr10: 5254134 .. 5254885 (-)
RNA-Seq Expression	Clc10G04770
Synteny	Clc10G04770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCCCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCAACACTTTGTGCCACACCTTTCATTTATACTCTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATGTTTAGTCGGGCGGCGGCCGTTAGGTCACCTATTTTGAGTTATGGACACACAAGGCCAAAACATGTGTGCCGGGCGTGCGACCCATCAACCTACTAGCAATGGGGGAGAAAACATAGCATGTCGCAACAAAAGCTTGATTCGAGGTGTCAGCAAAACACTGTCGTCTCTTCCAAAAACAAAAGCCCCTTAGCGCCCCGGGACGGGAGTGGGGGACGGCCTTACGCGCAGGCAACAGCAGCACCAGCTCTACGAAGTCAGAATCGAATCTTTCTGTTGGCTTTCCCAATTCATTCGTGAATCAGAATGAAAGGGCTAGAAGCGAGCGCTTCTAG

mRNA sequence

ATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCCCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCAACACTTTGTGCCACACCTTTCATTTATACTCTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGCAAAACACTGTCGTCTCTTCCAAAAACAAAAGCCCCTTAGCGCCCCGGGACGGGAGTGGGGGACGGCCTTACGCGCAGGCAACAGCAGCACCAGCTCTACGAAGTCAGAATCGAATCTTTCTGTTGGCTTTCCCAATTCATTCGTGAATCAGAATGAAAGGGCTAGAAGCGAGCGCTTCTAG

Coding sequence (CDS)

ATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATATCATTAACCACAGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCCCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCAATACCCATGTTTCCCGAAGCAACACTTTGTGCCACACCTTTCATTTATACTCTAAGCGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGCAAAACACTGTCGTCTCTTCCAAAAACAAAAGCCCCTTAGCGCCCCGGGACGGGAGTGGGGGACGGCCTTACGCGCAGGCAACAGCAGCACCAGCTCTACGAAGTCAGAATCGAATCTTTCTGTTGGCTTTCCCAATTCATTCGTGAATCAGAATGAAAGGGCTAGAAGCGAGCGCTTCTAG

Protein sequence

MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPGREWGTALRAGNSSTSSTKSESNLSVGFPNSFVNQNERARSERF

Homology

[Close]

BLAST of Clc10G04770 vs. NCBI nr
Match: KAA0033212.1 (NADH dehydrogenase subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.7e-65
Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 231 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 290

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 291 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 350

Query: 121 LKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG 156
           LKKIIAYSSVAHMNLVTI    R    + P+ + G
Sbjct: 351 LKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYG 385

[Close]

BLAST of Clc10G04770 vs. NCBI nr
Match: QVG61400.1 (NADH dehydrogenase subunit 4 [Fagus sylvatica])

HSP 1 Score: 258.8 bits (660), Expect = 3.7e-65
Identity = 140/162 (86.42%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 185 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 244

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 245 APTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAIIYTSLTTSRQID 304

Query: 121 LKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPGREWGTAL 163
           LKKIIAYSSVAHMNLVTI    R    + P+ + G+  G ++
Sbjct: 305 LKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYGQGIGGSI 346

[Close]

BLAST of Clc10G04770 vs. NCBI nr
Match: YP_009913636.1 (NADH dehydrogenase subunit 4 [Luffa acutangula] >QLJ93014.1 NADH dehydrogenase subunit 4 [Luffa acutangula])

HSP 1 Score: 258.5 bits (659), Expect = 4.8e-65
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. NCBI nr
Match: AZP40305.1 (NADH dehydrogenase subunit 4 [Cucumis melo var. momordica])

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-64
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 183 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 242

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 243 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 302

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 303 LKKIIAYSSVAHMNLVTI 320

[Close]

BLAST of Clc10G04770 vs. NCBI nr
Match: YP_004849354.1 (NADH dehydrogenase subunit 4 [Cucumis sativus] >ADZ10782.1 NADH dehydrogenase subunit 4 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-64
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot
Match: Q04050 (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris OX=3711 GN=ND4 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.8e-66
Identity = 134/138 (97.10%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILFQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGIPLKFGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot
Match: P27572 (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum OX=4565 GN=ND4 PE=2 SV=2)

HSP 1 Score: 244.6 bits (623), Expect = 9.5e-64
Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQI LTTEFSERRQI LWIA FASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQILLTTEFSERRQILLWIAFFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGT+GFLRFSIPMFPEATLC TPFIYTLSAIAIIYTSLTT RQID
Sbjct: 244 APTAGSVILAGILLKLGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot
Match: P93313 (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana OX=3702 GN=ND4 PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-63
Identity = 131/138 (94.93%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLIL QTGTTDLQI LTTEFSERRQIFLWIA FASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLK GT+GFLRFSIPMFPEATLC TPFIYTLSAIAIIYTSLTT RQID
Sbjct: 244 APTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot
Match: P26848 (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha OX=3197 GN=ND4 PE=3 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 8.3e-60
Identity = 125/138 (90.58%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAIL I  QTGTTDLQI LTTEFSERRQI LWIA FASF+VKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILFIFFQTGTTDLQILLTTEFSERRQILLWIAFFASFSVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGT+GFLRFSIPMFPEATL  TPFIYTLS IAIIYTSLTT RQID
Sbjct: 244 APTAGSVILAGILLKLGTYGFLRFSIPMFPEATLYFTPFIYTLSVIAIIYTSLTTIRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMN VTI
Sbjct: 304 LKKIIAYSSVAHMNFVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot
Match: Q37617 (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii OX=3111 GN=ND4 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51
Identity = 108/138 (78.26%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLI  QTGT D+++   ++FSE RQ  LW+A FASFAVKVPMVPVHIWLPEAHVE
Sbjct: 215 MLLAILLIYFQTGTLDIEMLYLSDFSETRQCILWLAFFASFAVKVPMVPVHIWLPEAHVE 274

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGT+GFLRFSIP+FP A +  TP IYT+S IAI+YTS TT RQID
Sbjct: 275 APTAGSVILAGILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVIAIVYTSCTTIRQID 334

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMN VTI
Sbjct: 335 LKKIIAYSSVAHMNFVTI 352

[Close]

BLAST of Clc10G04770 vs. ExPASy TrEMBL
Match: A0A5A7SPU7 (NADH dehydrogenase subunit 4 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46212G00030 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 8.1e-66
Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 231 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 290

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 291 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 350

Query: 121 LKKIIAYSSVAHMNLVTIAKHCRLFQKQKPLSAPG 156
           LKKIIAYSSVAHMNLVTI    R    + P+ + G
Sbjct: 351 LKKIIAYSSVAHMNLVTIGMFSRAAAVRSPILSYG 385

[Close]

BLAST of Clc10G04770 vs. ExPASy TrEMBL
Match: A0A7D5Y3R4 (NADH-ubiquinone oxidoreductase chain 4 OS=Luffa acutangula OX=56866 GN=nad4 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy TrEMBL
Match: G3EU35 (NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo subsp. melo OX=412675 GN=nad4 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.8e-65
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy TrEMBL
Match: G3EJ06 (NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis sativus OX=3659 GN=nad4 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.8e-65
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. ExPASy TrEMBL
Match: A0A3S9JII3 (NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo var. momordica OX=2034244 GN=nad4 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.8e-65
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 183 MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 242

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 243 APTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 302

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 303 LKKIIAYSSVAHMNLVTI 320

[Close]

BLAST of Clc10G04770 vs. TAIR 10
Match: ATMG00580.1 (NADH dehydrogenase subunit 4 )

HSP 1 Score: 251.5 bits (641), Expect = 5.5e-67
Identity = 134/138 (97.10%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 60
           MLLAILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE
Sbjct: 184 MLLAILLILFQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 243

Query: 61  APTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQID 120
           APTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFIYTLSAIAIIYTSLTTSRQID
Sbjct: 244 APTAGSVILAGIPLKFGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAIIYTSLTTSRQID 303

Query: 121 LKKIIAYSSVAHMNLVTI 139
           LKKIIAYSSVAHMNLVTI
Sbjct: 304 LKKIIAYSSVAHMNLVTI 321

[Close]

BLAST of Clc10G04770 vs. TAIR 10
Match: ATCG01050.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 51/137 (37.23%), Postives = 81/137 (59.12%), Query Frame = 0


Query: 2   LLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEA 61
           +L I L      T +L++     +    +I  +I    +FAVK P++P+H WLP+ H EA
Sbjct: 188 VLGISLYGSNEPTLNLELLANKSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEA 247

Query: 62  PTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDL 121
             +  ++LAGILLK+G +G +R ++ + P A    +P++  +  I IIY + T+  Q +L
Sbjct: 248 HYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIYAASTSPGQRNL 307

Query: 122 KKIIAYSSVAHMNLVTI 139
           KK IAYSSV+HM  + I
Sbjct: 308 KKRIAYSSVSHMGFIII 324

The following BLAST results are available for this feature:

BLAST of Clc10G04770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033212.1	1.7e-65	90.32	NADH dehydrogenase subunit 4 [Cucumis melo var. makuwa]	[more]
QVG61400.1	3.7e-65	86.42	NADH dehydrogenase subunit 4 [Fagus sylvatica]	[more]
YP_009913636.1	4.8e-65	100.00	NADH dehydrogenase subunit 4 [Luffa acutangula] >QLJ93014.1 NADH dehydrogenase s...	[more]
AZP40305.1	1.4e-64	99.28	NADH dehydrogenase subunit 4 [Cucumis melo var. momordica]	[more]
YP_004849354.1	1.4e-64	99.28	NADH dehydrogenase subunit 4 [Cucumis sativus] >ADZ10782.1 NADH dehydrogenase su...	[more]

BLAST of Clc10G04770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04050	7.8e-66	97.10	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris OX=3711 GN=ND4 PE=...	[more]
P27572	9.5e-64	95.65	NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum OX=4565 GN=ND4 PE=2 ...	[more]
P93313	1.6e-63	94.93	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana OX=3702 GN=ND4 PE...	[more]
P26848	8.3e-60	90.58	NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha OX=3197 GN=ND4 P...	[more]
Q37617	1.4e-51	78.26	NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii OX=3111 GN=ND4 ...	[more]

BLAST of Clc10G04770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPU7	8.1e-66	90.32	NADH dehydrogenase subunit 4 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A7D5Y3R4	2.3e-65	100.00	NADH-ubiquinone oxidoreductase chain 4 OS=Luffa acutangula OX=56866 GN=nad4 PE=3...	[more]
G3EU35	6.8e-65	99.28	NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo subsp. melo OX=412675 GN=...	[more]
G3EJ06	6.8e-65	99.28	NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis sativus OX=3659 GN=nad4 PE=3 S...	[more]
A0A3S9JII3	6.8e-65	99.28	NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo var. momordica OX=2034244...	[more]

BLAST of Clc10G04770 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00580.1	5.5e-67	97.10	NADH dehydrogenase subunit 4	[more]
ATCG01050.1	1.6e-18	37.23	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 1..141 e-value: 9.2E-37 score: 126.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..191
None	No IPR available	PANTHER	PTHR43507:SF13	NADH-QUINONE OXIDOREDUCTASE PROTEIN	coord: 1..142
IPR003918	NADH:ubiquinone oxidoreductase	PANTHER	PTHR43507	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G04770.1	Clc10G04770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0070469	respirasome
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity