Clc10G04730 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G04730
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Maturase
Location	ClcChr10: 5242223 .. 5242933 (+)
RNA-Seq Expression	Clc10G04730
Synteny	Clc10G04730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAGGCGATCAGAATGGTACTCAAATCCATTTACGATCCTGAGTTTCCAGACACATCGCACTTCCACTCGGGTCGAGGCCGCCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTCTTTTCCGTCGGACGACTTGTAGGAGGTGAGAAGGGCCCTTACTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGATTGTTCAGAGAATCAGATCGGTTCTATTAAGGACAGGTCGTATTGATGACCAAGAAAACTCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACTATAGAGCCCTCATTATGGGGAGGGTAAAGAGCTTCCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCTGGCTCAGGGGGACCAGAAAACGCCTTTCGTTTTCCCCCTTTCGTCGGCTCTTGCCGCCTTCCTTAACAAGCCCTCGAATCTCCTTTGCGCCGCCTTCCTCATATAAGCCACCAGGTTGA

mRNA sequence

ATGAAAGAGGCGATCAGAATGGTACTCAAATCCATTTACGATCCTGAGTTTCCAGACACATCGCACTTCCACTCGGGTCGAGGCCGCCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTCTTTTCCGTCGGACGACTTGTAGGAGGTGAGAAGGGCCCTTACTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGATTGTTCAGAGAATCAGATCGGTTCTATTAAGGACAGGTCGTATTGATGACCAAGAAAACTCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACTATAGAGCCCTCATTATGGGGAGGGTAAAGAGCTTCCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCTGGCTCAGGGGGACCAGAAAACGCCTTTCGTTTTCCCCCTTTCGTCGGCTCTTGCCGCCTTCCTTAACAAGCCCTCGAATCTCCTTTGCGCCGCCTTCCTCATATAAGCCACCAGGTTGA

Coding sequence (CDS)

ATGAAAGAGGCGATCAGAATGGTACTCAAATCCATTTACGATCCTGAGTTTCCAGACACATCGCACTTCCACTCGGGTCGAGGCCGCCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCACTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTCTTTTCCGTCGGACGACTTGTAGGAGGTGAGAAGGGCCCTTACTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGATTGTTCAGAGAATCAGATCGGTTCTATTAAGGACAGGTCGTATTGATGACCAAGAAAACTCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACTATAGAGCCCTCATTATGGGGAGGGTAAAGAGCTTCCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCACACAAGCACCACCTGGCTCAGGGGGACCAGAAAACGCCTTTCGTTTTCCCCCTTTCGTCGGCTCTTGCCGCCTTCCTTAACAAGCCCTCGAATCTCCTTTGCGCCGCCTTCCTCATATAAGCCACCAGGTTGA

Protein sequence

MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPSLTSPRISFAPPSSYKPPG

Homology

[Close]

BLAST of Clc10G04730 vs. NCBI nr
Match: YP_009913627.1 (maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula])

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDR
Sbjct: 22  MKEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDR 81

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGG KGPYYSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 82  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGAKGPYYSVPHSVLLSALPGNIYLHKLDQ 141

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA
Sbjct: 142 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 201

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           AFHSLVSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 202 AFHSLVSSWHTPHTSTTRLRGDQK----TPF--VFPPS 233

[Close]

BLAST of Clc10G04730 vs. NCBI nr
Match: YP_003587246.1 (maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus lanatus])

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDR
Sbjct: 21  MKEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDR 80

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 81  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 140

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIPIVQRIR VLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA
Sbjct: 141 EIGRIRQKYEIPIVQRIRLVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 200

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           AFHSLVSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 201 AFHSLVSSWHTPHTSTTRLRGDQK----TPF--VFPPS 232

[Close]

BLAST of Clc10G04730 vs. NCBI nr
Match: AAQ08729.1 (maturase, partial [Hemsleya lijiangensis])

HSP 1 Score: 401.0 bits (1029), Expect = 7.2e-108
Identity = 198/213 (92.96%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 6   RMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDRHRLIS 65
           RM L+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDRHRLIS
Sbjct: 1   RMALESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIS 60

Query: 66  IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI 125
           IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI
Sbjct: 61  IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI 120

Query: 126 RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL 185
           RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL
Sbjct: 121 RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL 180

Query: 186 VSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           VSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 181 VSSWHTPHTSTTRLRGDQK----TPF--VFPPS 207

[Close]

BLAST of Clc10G04730 vs. NCBI nr
Match: AAQ08728.1 (maturase, partial [Luffa aegyptiaca])

HSP 1 Score: 398.3 bits (1022), Expect = 4.7e-107
Identity = 197/212 (92.92%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 7   MVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDRHRLISI 66
           MVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDRHRLISI
Sbjct: 1   MVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLISI 60

Query: 67  FKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR 126
           FKEEIDDPKFFYSIQKVFSVGRLVGG KGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR
Sbjct: 61  FKEEIDDPKFFYSIQKVFSVGRLVGGAKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR 120

Query: 127 QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV 186
           QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV
Sbjct: 121 QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV 180

Query: 187 SSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           SSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 181 SSWHTPHTSTTRLRGDQK----TPF--VFPPS 206

[Close]

BLAST of Clc10G04730 vs. NCBI nr
Match: KAF1856624.1 (hypothetical protein Lal_00038492 [Lupinus albus])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 202/231 (87.45%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHF SGRGR+SALRRIKEEWGTS  FLEFDIRKCFHTIDR
Sbjct: 21  MKEAIRMVLESIYDPEFPDTSHFRSGRGRYSALRRIKEEWGTSRRFLEFDIRKCFHTIDR 80

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLI IFKEEIDDPKFFYSI +VFS GRLVGGEKGP YSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 81  HRLIPIFKEEIDDPKFFYSIHQVFSAGRLVGGEKGP-YSVPHSVLLSALPGNIYLHKLDQ 140

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIP   RIRSVLLRTGRIDDQENSGEEASFNAPQD RA+I+GRVKS QRKA
Sbjct: 141 EIGRIRQKYEIP---RIRSVLLRTGRIDDQENSGEEASFNAPQDNRAIIVGRVKSIQRKA 200

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPSLTSPRISFAPPSS 232
           AFHSL+SSWHTP  +     GTRKRLSFSP RR LPPSLTSPR SFAPPSS
Sbjct: 201 AFHSLLSSWHTPPQAPPGEGGTRKRLSFSPLRRPLPPSLTSPRASFAPPSS 247

[Close]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot
Match: P0A3U0 (Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris OX=1359 GN=ltrA PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++EA+R++L+SIY+P F D SH F   R  H+AL+ IK E+G + WF+E DI+ CF  ID
Sbjct: 110 IQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCFDNID 169

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYS-VPHSVLLSALPGNIYLHKL 120
              LI +   +I D K    I K    G L   +    YS  P   +LS L  NIYLH+L
Sbjct: 170 HVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQGGILSPLLANIYLHEL 229

Query: 121 DQEIGRIRQKYEIPIVQRI 138
           D+ + +++ K++    +RI
Sbjct: 230 DKFVLQLKMKFDRESPERI 248

[Close]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot
Match: P0A3U1 (Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=ltrA PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++EA+R++L+SIY+P F D SH F   R  H+AL+ IK E+G + WF+E DI+ CF  ID
Sbjct: 110 IQEAVRIILESIYEPVFEDVSHGFRPQRSCHTALKTIKREFGGARWFVEGDIKGCFDNID 169

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYS-VPHSVLLSALPGNIYLHKL 120
              LI +   +I D K    I K    G L   +    YS  P   +LS L  NIYLH+L
Sbjct: 170 HVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQGGILSPLLANIYLHEL 229

Query: 121 DQEIGRIRQKYEIPIVQRI 138
           D+ + +++ K++    +RI
Sbjct: 230 DKFVLQLKMKFDRESPERI 248

[Close]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot
Match: P05511 (Uncharacterized 91 kDa protein in cob intron OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPMIT.06 PE=4 SV=4)

HSP 1 Score: 89.4 bits (220), Expect = 6.1e-17
Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++E +R+VL++IY+P F   SH F  GR  HSALR I   +    W++E DI+ CF +I 
Sbjct: 320 VQEILRIVLEAIYEPLFNTASHGFRPGRSCHSALRSIFTNFKGCTWWIEGDIKACFDSIP 379

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGE-KGPYYSVPHSVLLSALPGNIYLHKL 120
             +LI++   +I D +F   I+K  + G L     K      P   ++S +  NIYLH+L
Sbjct: 380 HDKLIALLSSKIKDQRFIQLIRKALNAGYLTENRYKYDIVGTPQGSIVSPILANIYLHQL 439

Query: 121 DQEIGRIRQKYE 131
           D+ I  ++ +++
Sbjct: 440 DEFIENLKSEFD 451

[Close]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot
Match: P38456 (Uncharacterized mitochondrial protein ymf11 OS=Marchantia polymorpha OX=3197 GN=YMF11 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++E IR +L+++Y+P F   SH F  GR +H+ L++I+ ++  + WF+E +  + F+ ID
Sbjct: 247 VQEVIRSILETLYEPYFLSCSHGFRPGRSQHTCLKQIRRDFVGTVWFIEGETSQYFNKID 306

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLD 120
           +  LI + +  I D +F   +QK        G E            +  L  NI LH+LD
Sbjct: 307 KQVLIGLMRRRIRDNRFLNLVQKEIKTSLRAGAE---------GTGVGPLLCNIVLHELD 365

Query: 121 QEIGRIRQ 128
             + R+++
Sbjct: 367 LFVMRLKR 365

[Close]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot
Match: Q9CA78 (Nuclear intron maturase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT4 PE=3 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++EAIR+VL+ ++ P F   SH   SGRGR SAL+ I      S W     + K      
Sbjct: 183 VQEAIRIVLEVVFSPHFSKISHSCRSGRGRASALKYINNNISRSDWCFTLSLNKKLDVSV 242

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY---YSVPHSVLLSALPGNIYLH 120
              L+S+ +E+++D      ++ +F   R++  E G +   + +P   +LS +  NIYL 
Sbjct: 243 FENLLSVMEEKVEDSSLSILLRSMFE-ARVLNLEFGGFPKGHGLPQEGVLSRVLMNIYLD 302

Query: 121 KLDQEIGRIRQKYE 131
           + D E  RI  ++E
Sbjct: 303 RFDHEFYRISMRHE 315

[Close]

BLAST of Clc10G04730 vs. ExPASy TrEMBL
Match: A0A7D6C8J7 (Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.8e-111
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDR
Sbjct: 22  MKEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDR 81

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGG KGPYYSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 82  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGAKGPYYSVPHSVLLSALPGNIYLHKLDQ 141

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA
Sbjct: 142 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 201

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           AFHSLVSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 202 AFHSLVSSWHTPHTSTTRLRGDQK----TPF--VFPPS 233

[Close]

BLAST of Clc10G04730 vs. ExPASy TrEMBL
Match: D5I3B6 (Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.8e-111
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDR
Sbjct: 21  MKEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDR 80

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 81  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 140

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIPIVQRIR VLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA
Sbjct: 141 EIGRIRQKYEIPIVQRIRLVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 200

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           AFHSLVSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 201 AFHSLVSSWHTPHTSTTRLRGDQK----TPF--VFPPS 232

[Close]

BLAST of Clc10G04730 vs. ExPASy TrEMBL
Match: Q4W4G6 (Maturase (Fragment) OS=Hemsleya lijiangensis OX=210377 GN=matR PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.5e-108
Identity = 198/213 (92.96%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 6   RMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDRHRLIS 65
           RM L+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDRHRLIS
Sbjct: 1   RMALESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLIS 60

Query: 66  IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI 125
           IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI
Sbjct: 61  IFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRI 120

Query: 126 RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL 185
           RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL
Sbjct: 121 RQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSL 180

Query: 186 VSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           VSSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 181 VSSWHTPHTSTTRLRGDQK----TPF--VFPPS 207

[Close]

BLAST of Clc10G04730 vs. ExPASy TrEMBL
Match: Q4W4G7 (Maturase (Fragment) OS=Luffa aegyptiaca OX=3670 GN=matR PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.3e-107
Identity = 197/212 (92.92%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 7   MVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDRHRLISI 66
           MVL+SIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTS WFLEFDIRKCFHTIDRHRLISI
Sbjct: 1   MVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLISI 60

Query: 67  FKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR 126
           FKEEIDDPKFFYSIQKVFSVGRLVGG KGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR
Sbjct: 61  FKEEIDDPKFFYSIQKVFSVGRLVGGAKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIR 120

Query: 127 QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV 186
           QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV
Sbjct: 121 QKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKAAFHSLV 180

Query: 187 SSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           SSWHTPHTSTT LRG +K    +PF  + PPS
Sbjct: 181 SSWHTPHTSTTRLRGDQK----TPF--VFPPS 206

[Close]

BLAST of Clc10G04730 vs. ExPASy TrEMBL
Match: A0A6A5L207 (Reverse transcriptase domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00038492 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.6e-107
Identity = 202/231 (87.45%), Postives = 209/231 (90.48%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHF SGRGR+SALRRIKEEWGTS  FLEFDIRKCFHTIDR
Sbjct: 21  MKEAIRMVLESIYDPEFPDTSHFRSGRGRYSALRRIKEEWGTSRRFLEFDIRKCFHTIDR 80

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLI IFKEEIDDPKFFYSI +VFS GRLVGGEKGP YSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 81  HRLIPIFKEEIDDPKFFYSIHQVFSAGRLVGGEKGP-YSVPHSVLLSALPGNIYLHKLDQ 140

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTGRIDDQENSGEEASFNAPQDYRALIMGRVKSFQRKA 180
           EIGRIRQKYEIP   RIRSVLLRTGRIDDQENSGEEASFNAPQD RA+I+GRVKS QRKA
Sbjct: 141 EIGRIRQKYEIP---RIRSVLLRTGRIDDQENSGEEASFNAPQDNRAIIVGRVKSIQRKA 200

Query: 181 AFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPSLTSPRISFAPPSS 232
           AFHSL+SSWHTP  +     GTRKRLSFSP RR LPPSLTSPR SFAPPSS
Sbjct: 201 AFHSLLSSWHTPPQAPPGEGGTRKRLSFSPLRRPLPPSLTSPRASFAPPSS 247

[Close]

BLAST of Clc10G04730 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 360.9 bits (925), Expect = 7.7e-100
Identity = 185/219 (84.47%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTIDR 60
           MKEAIRMVL+SIYDPEFPDTSHF SG+G HS LRRIKEEWG S WFLEFDIRKCFHTIDR
Sbjct: 17  MKEAIRMVLESIYDPEFPDTSHFRSGQGCHSVLRRIKEEWGISRWFLEFDIRKCFHTIDR 76

Query: 61  HRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSALPGNIYLHKLDQ 120
           HRLI I KEEIDDPKFFYSIQKVFS GRLVG E+GP YSVPHSVLLSALPGNIYLHKLDQ
Sbjct: 77  HRLIQILKEEIDDPKFFYSIQKVFSAGRLVGVERGP-YSVPHSVLLSALPGNIYLHKLDQ 136

Query: 121 EIGRIRQKYEIPIVQRIRSVLLRTG-RIDDQENSGEEASFNAPQDYRALIMGRVKSFQRK 180
           EIGRIRQKYEIPIVQR+RSVLLRTG RIDDQEN GEEASFNAPQD RA+I+G VKS QRK
Sbjct: 137 EIGRIRQKYEIPIVQRVRSVLLRTGRRIDDQENPGEEASFNAPQDNRAIIVGSVKSMQRK 196

Query: 181 AAFHSLVSSWHTPHTSTTWLRGTRKRLSFSPFRRLLPPS 219
           AAFHSLVSSWHTP TST  LRG +KR    PF  + PPS
Sbjct: 197 AAFHSLVSSWHTPPTSTLRLRGDQKR----PF--VFPPS 228

[Close]

BLAST of Clc10G04730 vs. TAIR 10
Match: AT1G74350.1 (Intron maturase, type II family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 1   MKEAIRMVLKSIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSHWFLEFDIRKCFHTID 60
           ++EAIR+VL+ ++ P F   SH   SGRGR SAL+ I      S W     + K      
Sbjct: 138 VQEAIRIVLEVVFSPHFSKISHSCRSGRGRASALKYINNNISRSDWCFTLSLNKKLDVSV 197

Query: 61  RHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY---YSVPHSVLLSALPGNIYLH 120
              L+S+ +E+++D      ++ +F   R++  E G +   + +P   +LS +  NIYL 
Sbjct: 198 FENLLSVMEEKVEDSSLSILLRSMFE-ARVLNLEFGGFPKGHGLPQEGVLSRVLMNIYLD 257

Query: 121 KLDQEIGRIRQKYE 131
           + D E  RI  ++E
Sbjct: 258 RFDHEFYRISMRHE 270

The following BLAST results are available for this feature:

BLAST of Clc10G04730 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913627.1	2.0e-110	93.12	maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula]	[more]
YP_003587246.1	2.0e-110	93.12	maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus l...	[more]
AAQ08729.1	7.2e-108	92.96	maturase, partial [Hemsleya lijiangensis]	[more]
AAQ08728.1	4.7e-107	92.92	maturase, partial [Luffa aegyptiaca]	[more]
KAF1856624.1	1.8e-106	87.45	hypothetical protein Lal_00038492 [Lupinus albus]	[more]

BLAST of Clc10G04730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0A3U0	1.2e-20	39.57	Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris OX=13...	[more]
P0A3U1	1.2e-20	39.57	Group II intron-encoded protein LtrA OS=Lactococcus lactis subsp. cremoris (stra...	[more]
P05511	6.1e-17	34.85	Uncharacterized 91 kDa protein in cob intron OS=Schizosaccharomyces pombe (strai...	[more]
P38456	2.2e-11	29.69	Uncharacterized mitochondrial protein ymf11 OS=Marchantia polymorpha OX=3197 GN=...	[more]
Q9CA78	2.9e-11	31.34	Nuclear intron maturase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NMAT...	[more]

BLAST of Clc10G04730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6C8J7	9.8e-111	93.12	Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1	[more]
D5I3B6	9.8e-111	93.12	Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1	[more]
Q4W4G6	3.5e-108	92.96	Maturase (Fragment) OS=Hemsleya lijiangensis OX=210377 GN=matR PE=4 SV=1	[more]
Q4W4G7	2.3e-107	92.92	Maturase (Fragment) OS=Luffa aegyptiaca OX=3670 GN=matR PE=4 SV=1	[more]
A0A6A5L207	8.6e-107	87.45	Reverse transcriptase domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_...	[more]

BLAST of Clc10G04730 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00520.1	7.7e-100	84.47	Intron maturase, type II family protein	[more]
AT1G74350.1	2.1e-12	31.34	Intron maturase, type II family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33642	COX1/OXI3 INTRON 1 PROTEIN-RELATED	coord: 1..216
None	No IPR available	PANTHER	PTHR33642:SF6	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..216
None	No IPR available	CDD	cd01651	RT_G2_intron	coord: 3..143 e-value: 3.9238E-31 score: 112.294
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 18..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G04730.2	Clc10G04730.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0090615	mitochondrial mRNA processing
biological_process	GO:1900864	mitochondrial RNA modification
biological_process	GO:0007005	mitochondrion organization
biological_process	GO:0032885	regulation of polysaccharide biosynthetic process
biological_process	GO:0009845	seed germination
cellular_component	GO:0005739	mitochondrion