Clc10G03480 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G03480
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	disease resistance protein (TIR-NBS-LRR class), putative
Location	ClcChr10: 3800850 .. 3803288 (+)
RNA-Seq Expression	Clc10G03480
Synteny	Clc10G03480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAAATTGGAGTATTTGCCTGAGTTTTTGCTACATGTGACAACTCTGCAATATCTTAGTCTACAGTTCTGCCGAAATTTAAAGTGCCTGCCACAATGGATTGGCAACCTCACCTCACTCACAAAGTTTGAGATTGCTTTTTGTGAAAAGCTAACTTTGCTACCAAAAGAGATTTGCCACATCCATGGTTTAGTATCATTAGTGATTCGGGGCTGTCCCGAACTGGGAAAATGTGCAAGAAGGGTACTGGAGAAGATTGGCCCAAGATCGCCCATATCCCCGTAATATGCATTGATCAACGAATCTCTAAACTTTAATAATCAGGTATGCAAACCAATTTTCTCTCTCTCATCATTTCTATATACAGTCTTTGAAACGATTTCAAAAAATTTGACCACACAAAAGGGGTAATGCTAATGATGAACTAAATGGTTTCTCTTATTGTTCTTCATGCAGTCTAAGAAGTTGTGATAATTGTAGCATTGTTTTGATTGTATAATTGTAGATCAATATTGCTTTAGTGCTGTTCTAAACAATCTTACCAATAATGCCTTGCATTTGTGGCTGAATTATCGAGGAGAAGACCTTCTGCTGAGCAACACAATTGGGTAAAGAGTTCTGATAAACAAGACATGTTTAATGTAATTTTTTGCCTTGTCTCTTGCCTCTGACTCCATACGTCTGTTTTGTCTAGAAGATTTTAGTTCAGCCATTAATATACTAGGGGGCAAGCAGGAGAAAACTGAAGTCAATCTTTTGGTATAAAGCTTACTCAAATTCAAATGGAGTGCTTTATGTTGAGAAGCAACTGCTACATAAATACATTATCTCTGTTTCTTTGTTTCCAAACATTCATGTCAGCAATGATTCATGGTGCCATAACTAATACATCTTTTTATCAAAATCATATCAGTAATTTGGCTGCAGTTTTTAATGTCAAGCAGGAGAATTGTTACTCAGCAAGATTTGAAGAGTTGTCTCATTCTCATTGCAGTCCTAGTTCTTCCATTTTATCCCTTAGTTGTTGGCAATAGACCACGTAAGTTGTATTCTTTTTATATAGGGAAAAATACTTTATAATACTGAAACTTTATTGATTATAATTCTTTGGTCCCTAAGTTTCAAAATGTTAAATATTTAGTTCTTAAGTTTTGAGTTTGATTTCAATTTAGTCCTTTGGTTTTAAATGTTACAATTTTACTATTGGGATTTCAATTTTGTTTCAATTTTGGTCTCTAAGTTTCAAATTTTATACTTTCAACCTCGATTTTTCACTAAATACTCCCTTTTCATCTTTAATATTAATGCCTATTGAAGCCTTTAAAGTAATTATAAAGTGAAAATTTAAATTTAATTTTAATAGTGAAACTTAATTGATTATAATTTTAAAATAATTAATAGACATTAACACTAAAGACAGAAAGTGAGTATTTAGTGAAAAATTGAGGCTAAAAGTGTAAATCTTGAATCATAGGGACCAAATTGAAATAGAACTCAAATCTTAAGGTAACATTGTAACATTTTGAAACCTAGGAACTAAATGGAAGTCAAACTCAAAACTTAAGAACTTAAAGTGTAACAACCTAGGGACCAAATGAAAAGTAAACTCAAAACTTAGGGGCCAAAAATGTAATTTTCTCTTTTTTATATATAAATGGTGAACTGAAACTGAAATTCCCAGTCATTTTTTGCTCTCCCTCTCCTCCTTGTTCCTTTCACTTCCCCTCGTTTGTGCAATAGCTTTAGCATATTGCCTTTTTCTTCAGAGTGGATTTGCTTGTTTCTTTCTTTAGCCTTAATTGTTATGTAATTTCTTACAGGACAAGGGCGAGGTTTATGTCTGCTAAGCTTCAAAACAATTTATTTTGAGGTTGAAAACTTGGAAGCAGATTCAAAAGGCACAAAATGGGTAATGATAAAATTGCTTTCTCCTGCTCATCTACCTTTTTCTTTAGACCAAGAACCTAATAATTTCAGATGCAATTATTTTGTCTTTGATGTTCATGATACACTTGGAGTTTAGGGCATGTTTGAGTTTGAGAGAGATTTTAAATAGTTAAAATTGCTTTTGTCATTTTCAATATAACTATAAAAGATGCTTTTAATGATTCAAAATCAATTTTCATAATATGAAAAATGCATGTAAAACTGAATAGTAAATTAATTTTTAAAAATTAAAAGTGCGTTTCAAAGTAATTTTAACAATTCCAAAAGCACTTCCAAACTAGTTAACCTTTGAAACTGAAGGATAATTGAGTTGGTCTTTTTGCAAACGTAGCTTCTTAATGGAGAGAAGATGATCAGCTATACAACAGATGCAGGTGAAGGAAGGAAAGAGATTATCCAAAACAAAATGATCGATGCCACTTTAAAGAGTCTTTTTCATTTCATTTCCTTTCAGGTAATATTGTTAAGCTGCCTAAATATTTATCTTGA

mRNA sequence

ATGTGTAAATTGGAGTATTTGCCTGAGTTTTTGCTACATGTGACAACTCTGCAATATCTTAGTCTACAGTTCTGCCGAAATTTAAAGTGCCTGCCACAATGGATTGGCAACCTCACCTCACTCACAAAGTTTGAGATTGCTTTTTGTGAAAAGCTAACTTTGCTACCAAAAGAGATTTGCCACATCCATGGTTTAGTATCATTAGTGATTCGGGGCTGTCCCGAACTGGGAAAATGTGCAAGAAGGTTTTTAATGTCAAGCAGGAGAATTGTTACTCAGCAAGATTTGAAGAGTTGTCTCATTCTCATTGCAGTCCTAGTTCTTCCATTTTATCCCTTAGTTGTTGGCAATAGACCACGACAAGGGCGAGGTTTATGTCTGCTAAGCTTCAAAACAATTTATTTTGAGGTTGAAAACTTGGAAGCAGATTCAAAAGGCACAAAATGGCTTCTTAATGGAGAGAAGATGATCAGCTATACAACAGATGCAGGTAATATTGTTAAGCTGCCTAAATATTTATCTTGA

Coding sequence (CDS)

ATGTGTAAATTGGAGTATTTGCCTGAGTTTTTGCTACATGTGACAACTCTGCAATATCTTAGTCTACAGTTCTGCCGAAATTTAAAGTGCCTGCCACAATGGATTGGCAACCTCACCTCACTCACAAAGTTTGAGATTGCTTTTTGTGAAAAGCTAACTTTGCTACCAAAAGAGATTTGCCACATCCATGGTTTAGTATCATTAGTGATTCGGGGCTGTCCCGAACTGGGAAAATGTGCAAGAAGGTTTTTAATGTCAAGCAGGAGAATTGTTACTCAGCAAGATTTGAAGAGTTGTCTCATTCTCATTGCAGTCCTAGTTCTTCCATTTTATCCCTTAGTTGTTGGCAATAGACCACGACAAGGGCGAGGTTTATGTCTGCTAAGCTTCAAAACAATTTATTTTGAGGTTGAAAACTTGGAAGCAGATTCAAAAGGCACAAAATGGCTTCTTAATGGAGAGAAGATGATCAGCTATACAACAGATGCAGGTAATATTGTTAAGCTGCCTAAATATTTATCTTGA

Protein sequence

MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIHGLVSLVIRGCPELGKCARRFLMSSRRIVTQQDLKSCLILIAVLVLPFYPLVVGNRPRQGRGLCLLSFKTIYFEVENLEADSKGTKWLLNGEKMISYTTDAGNIVKLPKYLS

Homology

[Close]

BLAST of Clc10G03480 vs. NCBI nr
Match: XP_022944072.1 (putative disease resistance protein RGA1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 3   KLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHI 62
           KLEYLP  + HVTTLQ + +++C NLK LP+W+G+LTSL++  I  C  LT LP+ I H+
Sbjct: 259 KLEYLPNGIQHVTTLQTIRIEWCLNLKTLPEWMGSLTSLSELSIILCPMLTSLPEGIHHL 318

Query: 63  HGLVSLVIRGCPELGK 79
             L SL I  C +LGK
Sbjct: 319 PSLKSLKIWNCSKLGK 334

[Close]

BLAST of Clc10G03480 vs. NCBI nr
Match: XP_017970273.1 (PREDICTED: putative disease resistance protein RGA1 [Theobroma cacao])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-11
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1    MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEIC 60
            M KL  LP+ L HVTTL+YL +  C NLK LP+WI NLT L +FEI  C +L  LP+ +C
Sbjct: 1082 MPKLNSLPDGLQHVTTLKYLQISSCSNLKSLPEWICNLTVLQRFEIFDCPQLVSLPQALC 1141

Query: 61   HIHGLVSLVIRGCPEL 77
             ++ L  L I GCP L
Sbjct: 1142 SLNALQYLEISGCPLL 1157

[Close]

BLAST of Clc10G03480 vs. NCBI nr
Match: XP_021293332.1 (putative disease resistance protein RGA1 [Herrania umbratica])

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-11
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1    MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEIC 60
            M KL  LP+ L HVTTL+YL +  C NLK LP+WI NLT L +FEI  C +L  LP+ +C
Sbjct: 1082 MPKLSSLPDGLQHVTTLKYLQISSCSNLKRLPEWICNLTVLQRFEIFDCPQLVSLPQTLC 1141

Query: 61   HIHGLVSLVIRGCPEL 77
             ++ L  L I GCP L
Sbjct: 1142 SLNALQYLEISGCPLL 1157

[Close]

BLAST of Clc10G03480 vs. NCBI nr
Match: XP_023873549.1 (putative disease resistance protein RGA3 [Quercus suber])

HSP 1 Score: 78.6 bits (192), Expect = 6.0e-11
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 3    KLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHI 62
            KL  LP+ L HV T+Q L +  C +L  +P+WIGNLTSL + EI+ C  LT LP+EICH+
Sbjct: 1011 KLVSLPDGLQHVNTIQKLEIHNCTDLMAIPEWIGNLTSLHQLEISGCFNLTSLPQEICHL 1070

Query: 63   HGLVSLVIRGCPEL 77
              L  L I+ CP L
Sbjct: 1071 TTLQILKIKNCPNL 1084

[Close]

BLAST of Clc10G03480 vs. NCBI nr
Match: EOY01217.1 (LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao])

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-10
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1    MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEIC 60
            M KL  LP+ L HVTTL+YL +  C NLK LP+WI NLT L +FEI  C +L  L + +C
Sbjct: 1089 MPKLNSLPDGLQHVTTLKYLQISSCSNLKSLPEWICNLTVLQRFEIFDCPQLVSLQQALC 1148

Query: 61   HIHGLVSLVIRGCPEL 77
             ++ L  L I GCP L
Sbjct: 1149 SLNALQYLEISGCPLL 1164

[Close]

BLAST of Clc10G03480 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 4   LEYLPEFLLHVTTLQYLSLQFCRNLKCLP-QWIGNLTSLTKFEIAFCEKLTLLPKEICHI 63
           L+ LP  L  +  L+ L +++C  L+ LP + +  L+SLT+  +  C  L  LP+ + H+
Sbjct: 894 LKELPTSLASLNNLKCLDIRYCYALESLPEEGLEGLSSLTELFVEHCNMLKCLPEGLQHL 953

Query: 64  HGLVSLVIRGCPELGK 79
             L SL IRGCP+L K
Sbjct: 954 TTLTSLKIRGCPQLIK 969

[Close]

BLAST of Clc10G03480 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.1e-06
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 4   LEYLPEFLLHVTTLQYLSLQFCRNLKCLP-QWIGNLTSLTKFEIAFCEKLTLLPKEICHI 63
           L+ LP  L  +  L+ L ++ C +L+  P Q +  LTSLT+  + +C+ L  LP+ + H+
Sbjct: 891 LKDLPTSLTSLNALKRLQIESCDSLESFPEQGLEGLTSLTQLFVKYCKMLKCLPEGLQHL 950

Query: 64  HGLVSLVIRGCPELGK 79
             L +L + GCPE+ K
Sbjct: 951 TALTNLGVSGCPEVEK 966

[Close]

BLAST of Clc10G03480 vs. ExPASy Swiss-Prot
Match: Q9LVT1 (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana OX=3702 GN=At5g47280 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04
Identity = 29/96 (30.21%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 4   LEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIH 63
           L  LP  +  +T+L  +S+  C N+K LP+ I  L +L    +  C +L  LP EIC + 
Sbjct: 476 LAELPSTICGITSLNSISITNCPNIKELPKNISKLQALQLLRLYACPELKSLPVEICELP 535

Query: 64  GLVSLVIRGCPELGKCARRFLMSSRRIVTQQDLKSC 100
            LV + I  C  L     +  + + R + + D++ C
Sbjct: 536 RLVYVDISHCLSLSSLPEK--IGNVRTLEKIDMREC 569

[Close]

BLAST of Clc10G03480 vs. ExPASy TrEMBL
Match: A0A6J1FUS3 (putative disease resistance protein RGA1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448619 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 9.1e-13
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 3   KLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHI 62
           KLEYLP  + HVTTLQ + +++C NLK LP+W+G+LTSL++  I  C  LT LP+ I H+
Sbjct: 259 KLEYLPNGIQHVTTLQTIRIEWCLNLKTLPEWMGSLTSLSELSIILCPMLTSLPEGIHHL 318

Query: 63  HGLVSLVIRGCPELGK 79
             L SL I  C +LGK
Sbjct: 319 PSLKSLKIWNCSKLGK 334

[Close]

BLAST of Clc10G03480 vs. ExPASy TrEMBL
Match: A0A6J1B1X2 (putative disease resistance protein RGA1 OS=Herrania umbratica OX=108875 GN=LOC110423442 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-11
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1    MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEIC 60
            M KL  LP+ L HVTTL+YL +  C NLK LP+WI NLT L +FEI  C +L  LP+ +C
Sbjct: 1082 MPKLSSLPDGLQHVTTLKYLQISSCSNLKRLPEWICNLTVLQRFEIFDCPQLVSLPQTLC 1141

Query: 61   HIHGLVSLVIRGCPEL 77
             ++ L  L I GCP L
Sbjct: 1142 SLNALQYLEISGCPLL 1157

[Close]

BLAST of Clc10G03480 vs. ExPASy TrEMBL
Match: A0A061EA34 (LRR and NB-ARC domains-containing disease resistance protein, putative OS=Theobroma cacao OX=3641 GN=TCM_011164 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.5e-11
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 1    MCKLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEIC 60
            M KL  LP+ L HVTTL+YL +  C NLK LP+WI NLT L +FEI  C +L  L + +C
Sbjct: 1089 MPKLNSLPDGLQHVTTLKYLQISSCSNLKSLPEWICNLTVLQRFEIFDCPQLVSLQQALC 1148

Query: 61   HIHGLVSLVIRGCPEL 77
             ++ L  L I GCP L
Sbjct: 1149 SLNALQYLEISGCPLL 1164

[Close]

BLAST of Clc10G03480 vs. ExPASy TrEMBL
Match: A0A6J1FNX2 (putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111445964 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.5e-11
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 3    KLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHI 62
            KLEYLP  + HVTTL+ +S+  C NL  LP+WIG+ TSL    I  C KLT LP+ I H+
Sbjct: 1199 KLEYLPNGMQHVTTLERISIISCPNLITLPEWIGDFTSLLDLMIMECPKLTSLPERIHHL 1258

Query: 63   HGLVSLVIRGCPEL 77
              L  L IR CP+L
Sbjct: 1259 PSLQDLHIRDCPKL 1272

[Close]

BLAST of Clc10G03480 vs. ExPASy TrEMBL
Match: A0A0A0LMP4 (Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074130 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 1   MCKLEYLPEFLLH-VTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEI 60
           + ++EYLPE   H +T+LQ L L  C NLK LP WIGNLTSLT  +I+ C+KLT+LP+EI
Sbjct: 782 LSRVEYLPECWQHYMTSLQLLYLSKCENLKSLPGWIGNLTSLTGLKISTCDKLTMLPEEI 841

Query: 61  CHIHGLVSLVIRGCPEL 77
            ++  L +L I  C  L
Sbjct: 842 DNLTSLTNLDISYCKNL 858

[Close]

BLAST of Clc10G03480 vs. TAIR 10
Match: AT5G47280.1 (ADR1-like 3 )

HSP 1 Score: 48.1 bits (113), Expect = 8.1e-06
Identity = 29/96 (30.21%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 4   LEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIH 63
           L  LP  +  +T+L  +S+  C N+K LP+ I  L +L    +  C +L  LP EIC + 
Sbjct: 476 LAELPSTICGITSLNSISITNCPNIKELPKNISKLQALQLLRLYACPELKSLPVEICELP 535

Query: 64  GLVSLVIRGCPELGKCARRFLMSSRRIVTQQDLKSC 100
            LV + I  C  L     +  + + R + + D++ C
Sbjct: 536 RLVYVDISHCLSLSSLPEK--IGNVRTLEKIDMREC 569

[Close]

BLAST of Clc10G03480 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 23/79 (29.11%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 3   KLEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHI 62
           K+E LP  +  ++ L  L +  C+ L+ LP ++G+L SL    +  C +L  LP  + ++
Sbjct: 727 KIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNL 786

Query: 63  HGLVSLVIRGCPELGKCAR 82
             L +L + GC  + +  R
Sbjct: 787 TSLETLEVSGCLNVNEFPR 805

[Close]

BLAST of Clc10G03480 vs. TAIR 10
Match: AT5G66910.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 43.5 bits (101), Expect = 2.0e-04
Identity = 27/75 (36.00%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 4   LEYLPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIH 63
           L+ LP ++  V +L+ LS+  C  L  LP+ IGNL+ L    +  C  L+ LP+    + 
Sbjct: 668 LDELPYWIPEVVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRMCSCMNLSELPEATERLS 727

Query: 64  GLVSLVIRGCPELGK 79
            L SL I  C  L K
Sbjct: 728 NLRSLDISHCLGLRK 742

[Close]

BLAST of Clc10G03480 vs. TAIR 10
Match: AT5G45230.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 43.5 bits (101), Expect = 2.0e-04
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 7   LPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIHGLV 66
           LP  + ++  L +L+L+ C+NL  LP  +G L SL + +++ C KL + P     +  L+
Sbjct: 763 LPPAIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCSKLKIFPDVTAKMESLL 822

Query: 67  SLVIRG--CPELGKCARRFLMSSRRI 91
            L++ G    EL  C+   L S RR+
Sbjct: 823 VLLLDGTSIAEL-PCSIFHLSSLRRL 847

[Close]

BLAST of Clc10G03480 vs. TAIR 10
Match: AT5G44510.1 (target of AVRB operation1 )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 24/70 (34.29%), Postives = 32/70 (45.71%), Query Frame = 0


Query: 7   LPEFLLHVTTLQYLSLQFCRNLKCLPQWIGNLTSLTKFEIAFCEKLTLLPKEICHIHGLV 66
           LP  + ++T LQ L L  C +LK LP  + N  +L    +  C  L  LP  I  I  L 
Sbjct: 887 LPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLS 946

Query: 67  SLVIRGCPEL 77
            L +  C  L
Sbjct: 947 YLDVSNCSSL 956

The following BLAST results are available for this feature:

BLAST of Clc10G03480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944072.1	1.9e-12	52.63	putative disease resistance protein RGA1 isoform X1 [Cucurbita moschata]	[more]
XP_017970273.1	1.6e-11	52.63	PREDICTED: putative disease resistance protein RGA1 [Theobroma cacao]	[more]
XP_021293332.1	2.7e-11	52.63	putative disease resistance protein RGA1 [Herrania umbratica]	[more]
XP_023873549.1	6.0e-11	51.35	putative disease resistance protein RGA3 [Quercus suber]	[more]
EOY01217.1	1.3e-10	51.32	LRR and NB-ARC domains-containing disease resistance protein, putative [Theobrom...	[more]

BLAST of Clc10G03480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA40	4.7e-06	38.16	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA39	6.1e-06	35.53	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q9LVT1	1.1e-04	30.21	Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Clc10G03480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUS3	9.1e-13	52.63	putative disease resistance protein RGA1 isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1B1X2	1.3e-11	52.63	putative disease resistance protein RGA1 OS=Herrania umbratica OX=108875 GN=LOC1...	[more]
A0A061EA34	6.5e-11	51.32	LRR and NB-ARC domains-containing disease resistance protein, putative OS=Theobr...	[more]
A0A6J1FNX2	8.5e-11	52.70	putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LMP4	1.1e-10	51.95	Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G074130 PE=4 S...	[more]

BLAST of Clc10G03480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47280.1	8.1e-06	30.21	ADR1-like 3	[more]
AT5G17680.1	1.4e-05	29.11	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT5G66910.1	2.0e-04	36.00	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT5G45230.1	2.0e-04	32.56	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G44510.1	3.4e-04	34.29	target of AVRB operation1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..94 e-value: 3.2E-18 score: 67.3
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 3..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G03480.1	Clc10G03480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding