Clc10G03240 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G03240
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6
Location	ClcChr10: 3565798 .. 3568971 (-)
RNA-Seq Expression	Clc10G03240
Synteny	Clc10G03240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTTGGTTCTTTTCTGGTGTGTGAGGTAATGCGTTTTTTTCTTTTCTAAGTTCTGATCTTCGATTTTTCTTTTACCTTGGTGCTTGAGGTTTTTATTTGCTTTCTCTGGAATTTCTGTCTCGGGGTTAATTTAATCTGGGTTTTTAGTTTCTGAAAATGTTTTTTTTATTATTTTTTTATTTTTAATGCTTGAGATTCTAGTTGGGTTTCTCTGTAATCGTTAGTTCTGAGTTCTTCAATTTAATGCTTTCTCCTAGCCAGGAACCTGGCCAATGCGCCTCCCCTCGGAGCTCTTCGAGGGTTTTGTACGCCCATGGTCTTTGTGTGCCATATATATATCTCTCTCGAAAAAAAAATAAATAAATAATAAAAAATAAAAATCGTAGTTTTCTAGGGAGATCCTGTAGGGATCGTTTCAAATTTTATGGTATCTTCTATTTAGCCTCTTTATTTCGTAAATTGAATTGTGGGTAATGGCTGTAACTCGGAAAGATGGTGTATTGACGGAATCTATAGGACGCATGACAAGTGTTTGCTTTAAGTACTGAATGAAACAATCTTTCTTTCTGATGTGTAAATTTTAGATTTTGTTGTTTGATCTTCAGCTTGGGCTAGGAAGTGTGTAGATAAGATTCACATTCATTTGATTTTCTTTTTACTTGTTGGCATTTCTTGAATTCACAAAACTTCATTGCTGTATAGAACTTGTTAATTGATGCCGATGGTGGTGTTAACTTGTTTTGTTTTCCAGTTTGTGAATTGATAGTAGATCTTGAATACTTTAAATAACTAAGGGGTTGTTCTAGGGGGAAGATATTGGGTATTGCATTACCTTTAGGTGTTAGAGTGGTAAGAGTTTGAGATGGTTGGATATATTGTTTAATTTTGTTGGTACACTTTCTGAAGTGTAATTTTCCAGTATACAGTGAAATTAGGCGACTAGTGTTTCTCTCTTCTCTTTCTCTCACTTTTTAGATTTTGAGGTAGGTTAAAAGATCAATTAACAAACATAGCTAATGGTTGAGAACCCCTATTGAAACCCCCAACTGAGGTCTACCCCTTAACACCATCCAAATCACAATGTTTTCGTTACAGACTATCCTATTTCTCTCTAGACCTTTTACCTATAATCATCACAGTTATTGTTTGCTAATTTTTGAAACTCAAAGTAGTCACTTAAACATGGCTGAAAAGGTTGAAGCGATTTTTGTAAATTAAGCATAGTTTGTCTTCTCTCCGTTAGATATAACTCTTAGAGGTTACATTTCTACACTTATGGTTACATTCATAATTCATTAGCATTAGTTAATCACGAGACACTCATTATGTAGGTTTGGATTATGAGAATGTATAATTCATAGGGTAGTCAGGTGCATTACATTATCTTCTCAAAATCCATAGTTGTCTATAATGCATGGTTTTCTCCTACAACTTAGGCCTTATCAAATCATAGGCTTTTGAACCACGCTTTGTATCCTCAGGCTTTTTAAACCAACAGAACAAATGCCAGCTTACAGATCTATATTGTGGGGCTTGGAGGGAAAGGAACAATAGAATTTTTAGAGGGGTGTATAGGGGACCTTGGGATGTTATGTCTCTAGGTTCCATTTTTACCTTTGGGGGTTAGTGCCAATCTTTTTGTGATTATTCATTAGGTCTTTTGCTGTTCAATTGGAATTGCTTTCTTTAGCGGGACTTTCTTTTGTGGGCTTATTTTTTTGGATGCTCTTGTATTCTTTCACTTTCTCTCAGTGAAAGTCTGGTTCTTCATCATAAATAATCAGTTCTATCAAGCAAGTGAAGAAAATATAATTAGAAAGTACCTTTGGCTCTAAGGATGCATACGTTGTGTCCCAATTTCTGAGGTTAATCAATATTTCTATACTAGAATGAAGAATTTGTATTAGTAGTGGAGTCAAGCTGAGTATAGTAGAGATGCTTACAACATATATCTTTTCTTCACAAAGTGTAGTCTGAGAGTCATTTCATATTTGCTTATGGCTTGAAAAATAGAGTATTCGTTTAGCATGTTGTTGATTGGCACCTGATGGTTAAACGGGCAAGGTGGAACGCCTTAGCTTTTAGGTATCTTGAGTCCTGTGGAATGGGAGAGATTGGAAGCTCTCAATTTCTCCTTTTAACTTTGTACCTTTCTTTTTTGCGTAAACAGATGCAAAAATTCTATCAGTTGCAGATGGCATGTGGTATGATAATATTATGATTAATCATTTGCAGGTGGAATGACATTTGGGATGTGATGAATGGCACTTTCGCATCCAGTGCCTTACGCGCTGCTTTTTCGCACTGTGTACAGCAAGTGCGAAACTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTGCAATGCGAAAGGCTGCATTCACACTTAGAGCATTTAATGTTGAAACATCGAGAGCCATGGACGTTGCTACCGATCCCAGGATAGGTCTTATGCGACTTGTATGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTTAAAAGGTCTGTCGAAGCTCGAATTAACGATGCCAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAACTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAAGCTGGTGGTATTAGGTCCACAGCAGCTGATCATGCTGCATCTCACATCGGTAAGGCTGATGGACTGCTTTTGTTGCTCAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTCAAAGTGGCCGAAAATCACGGTTTGCTGGCGAAGCAAGGAGGGCGTATTGAGTTACACTTGGATTCGAGGGAGAGACTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGTGACTTGGCCGGGACAGTTCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCTGTGCCTGCTCAGGTTCTGTTGGATTCTTTAAGAAAGGTACAATTTGATGTTTTTGATTCAAGGTTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTGAGATTGAAGTGGTCCTCTTGGAGGGGAAAATACTAA

mRNA sequence

ATGAATTTTGGTTCTTTTCTGGTGTGTGAGCATGTTGTTGATTGGCACCTGATGGTTAAACGGGCAAGGTGGAACGCCTTAGCTTTTAGGTGGAATGACATTTGGGATGTGATGAATGGCACTTTCGCATCCAGTGCCTTACGCGCTGCTTTTTCGCACTGTGTACAGCAAGTGCGAAACTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTGCAATGCGAAAGGCTGCATTCACACTTAGAGCATTTAATGTTGAAACATCGAGAGCCATGGACGTTGCTACCGATCCCAGGATAGGTCTTATGCGACTTGTATGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTTAAAAGGTCTGTCGAAGCTCGAATTAACGATGCCAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAACTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAAGCTGGTGGTATTAGGTCCACAGCAGCTGATCATGCTGCATCTCACATCGGTAAGGCTGATGGACTGCTTTTGTTGCTCAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTCAAAGTGGCCGAAAATCACGGTTTGCTGGCGAAGCAAGGAGGGCGTATTGAGTTACACTTGGATTCGAGGGAGAGACTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGTGACTTGGCCGGGACAGTTCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCTGTGCCTGCTCAGGTTCTGTTGGATTCTTTAAGAAAGGTACAATTTGATGTTTTTGATTCAAGGTTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTGAGATTGAAGTGGTCCTCTTGGAGGGGAAAATACTAA

Coding sequence (CDS)

ATGAATTTTGGTTCTTTTCTGGTGTGTGAGCATGTTGTTGATTGGCACCTGATGGTTAAACGGGCAAGGTGGAACGCCTTAGCTTTTAGGTGGAATGACATTTGGGATGTGATGAATGGCACTTTCGCATCCAGTGCCTTACGCGCTGCTTTTTCGCACTGTGTACAGCAAGTGCGAAACTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTGCAATGCGAAAGGCTGCATTCACACTTAGAGCATTTAATGTTGAAACATCGAGAGCCATGGACGTTGCTACCGATCCCAGGATAGGTCTTATGCGACTTGTATGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTTAAAAGGTCTGTCGAAGCTCGAATTAACGATGCCAGAAGGGAGGACACCGACATTCCAGGAACCATTGATGAACTAGAGAAATATGCTGAAGATACTGCATCAACACTACTCTACATGACCCTTCAAGCTGGTGGTATTAGGTCCACAGCAGCTGATCATGCTGCATCTCACATCGGTAAGGCTGATGGACTGCTTTTGTTGCTCAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTCAAAGTGGCCGAAAATCACGGTTTGCTGGCGAAGCAAGGAGGGCGTATTGAGTTACACTTGGATTCGAGGGAGAGACTATGTGATGCAGTTTTTGAGATGGCTTCTGTAGCCAATGCTCATTTGCAAAAAGCTCGTGACTTGGCCGGGACAGTTCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCTGTGCCTGCTCAGGTTCTGTTGGATTCTTTAAGAAAGGTACAATTTGATGTTTTTGATTCAAGGTTACAACGTGGAGTTTTGGGTGTTCCTCCTTTGTGGTTTCAACTGAGATTGAAGTGGTCCTCTTGGAGGGGAAAATACTAA

Protein sequence

MNFGSFLVCEHVVDWHLMVKRARWNALAFRWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWRGKY

Homology

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BLAST of Clc10G03240 vs. NCBI nr
Match: XP_016900683.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo])

HSP 1 Score: 604.0 bits (1556), Expect = 8.1e-169
Identity = 302/326 (92.64%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 18  MVKRARWNALAF---RWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPP 77
           MV +ARWN LA    RW+DIW+VMNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP
Sbjct: 1   MVDKARWNVLALASVRWSDIWNVMNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP 60

Query: 78  AMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 137
           AMRKAAF LRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV
Sbjct: 61  AMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 120

Query: 138 ISENKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRST 197
           ISENKISKLWLKRSVEARINDARREDTDIP TIDELEKYAEDTASTLLYMTLQAGGIRST
Sbjct: 121 ISENKISKLWLKRSVEARINDARREDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRST 180

Query: 198 AADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSR 257
            ADHAASHIGKA GLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQG   E+ LDSR
Sbjct: 181 TADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSR 240

Query: 258 ERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSR 317
           E LCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD R
Sbjct: 241 ESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPR 300

Query: 318 LQRGVLGVPPLWFQLRLKWSSWRGKY 341
           LQRGVLGV PLWFQ+RLKWSSWRGKY
Sbjct: 301 LQRGVLGVSPLWFQMRLKWSSWRGKY 326

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BLAST of Clc10G03240 vs. NCBI nr
Match: XP_038876846.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 602.1 bits (1551), Expect = 3.1e-168
Identity = 300/311 (96.46%), Postives = 302/311 (97.11%), Query Frame = 0


Query: 30  RWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVE 89
           RWNDIWDVMNG FASS+LRAAFSHCVQQVRNYDYHHYLCLLELPP MRKAAF LRAFNVE
Sbjct: 9   RWNDIWDVMNGAFASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPEMRKAAFALRAFNVE 68

Query: 90  TSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSV 149
           TSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSV
Sbjct: 69  TSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSV 128

Query: 150 EARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGL 209
           EARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKA GL
Sbjct: 129 EARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKAGGL 188

Query: 210 LLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVAN 269
           LLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGG IE+ LDSRE LCDAVFEMASVAN
Sbjct: 189 LLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGHIEIRLDSRESLCDAVFEMASVAN 248

Query: 270 AHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQL 329
           AHLQKARDLA TVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVP LWFQL
Sbjct: 249 AHLQKARDLARTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPHLWFQL 308

Query: 330 RLKWSSWRGKY 341
           RLKWSSWRGKY
Sbjct: 309 RLKWSSWRGKY 319

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BLAST of Clc10G03240 vs. NCBI nr
Match: TYK19487.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 599.7 bits (1545), Expect = 1.5e-167
Identity = 301/326 (92.33%), Postives = 307/326 (94.17%), Query Frame = 0


Query: 18  MVKRARWNALAF---RWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPP 77
           MV +ARW  LA    RWNDIW+VMNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP
Sbjct: 329 MVDKARWIVLALASVRWNDIWNVMNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP 388

Query: 78  AMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 137
           AMRKAAF LRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV
Sbjct: 389 AMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 448

Query: 138 ISENKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRST 197
           ISENKISKLWLKRSVEARINDARREDTDIP TIDELEKYAE TASTLLYMTLQAGGIRST
Sbjct: 449 ISENKISKLWLKRSVEARINDARREDTDIPTTIDELEKYAEGTASTLLYMTLQAGGIRST 508

Query: 198 AADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSR 257
            ADHAASHIGKA GLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQG   E+ LDSR
Sbjct: 509 TADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSR 568

Query: 258 ERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSR 317
           E LCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD R
Sbjct: 569 ESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPR 628

Query: 318 LQRGVLGVPPLWFQLRLKWSSWRGKY 341
           LQRGVLGV PLWFQ+RLKWSSWRGKY
Sbjct: 629 LQRGVLGVSPLWFQMRLKWSSWRGKY 654

[Close]

BLAST of Clc10G03240 vs. NCBI nr
Match: XP_038876847.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Benincasa hispida])

HSP 1 Score: 581.6 bits (1498), Expect = 4.3e-162
Identity = 292/303 (96.37%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNG FASS+LRAAFSHCVQQVRNYDYHHYLCLLELPP MRKAAF LRAFNVETSRAMDVA
Sbjct: 1   MNGAFASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPEMRKAAFALRAFNVETSRAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
           REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKA GLLLLLKSLP
Sbjct: 121 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKAGGLLLLLKSLP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARD 277
           YHATRNRHFSYIPVKVAENHGLLAKQGG IE+ LDSRE LCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKQGGHIEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 278 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWR 337
           LA TVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVP LWFQLRLKWSSWR
Sbjct: 241 LARTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPHLWFQLRLKWSSWR 300

Query: 338 GKY 341
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of Clc10G03240 vs. NCBI nr
Match: XP_004147937.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis sativus] >KGN55903.1 hypothetical protein Csa_011166 [Cucumis sativus])

HSP 1 Score: 576.2 bits (1484), Expect = 1.8e-160
Identity = 288/303 (95.05%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP+MRKAAF LRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
           REDTDIP  IDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKA GLLLLLKSLP
Sbjct: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARD 277
           YHATRNRHFSYIPVKVAENHGLLAK+G R E+ LDSRE LCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 278 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWR 337
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGV PLWFQ+RLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 338 GKY 341
           GKY
Sbjct: 301 GKY 303

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BLAST of Clc10G03240 vs. ExPASy Swiss-Prot
Match: A7YVD7 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus OX=9913 GN=NDUFAF6 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-47
Identity = 107/288 (37.15%), Postives = 162/288 (56.25%), Query Frame = 0


Query: 53  HCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQE 112
           +C++ +R  DY  YLC L LP   R +AF LRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKK 119

Query: 113 AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGTIDELEK 172
            +D IY+      P+A  L   +  + ++K WL + ++ R    +  D      I ELE 
Sbjct: 120 TVDDIYSDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDER---EKNLDDKAYRNIQELEN 179

Query: 173 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVK 232
           YAE+T S+LLY+TL+  GI+   ADHAASHIGKA G++  L++ PYH +R R F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVF--LPMD 239

Query: 233 VAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 292
           +   HG+  +      L       + D V+++AS A+ HL+ AR    ++P +A P  LQ
Sbjct: 240 ICMLHGVSQED----FLRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKAFPAFLQ 299

Query: 293 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWRGKY 341
            V  +  L  +++V FD+F   LQR    +P     L L   SWR +Y
Sbjct: 300 TVALEDYLKKIQQVDFDLFHPSLQRKNTLLP-----LSLYIQSWRKRY 333

[Close]

BLAST of Clc10G03240 vs. ExPASy Swiss-Prot
Match: A2AIL4 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus OX=10090 GN=Ndufaf6 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46
Identity = 104/288 (36.11%), Postives = 166/288 (57.64%), Query Frame = 0


Query: 53  HCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQE 112
           +C++ +R  DY  YLC L  P   +++A  LRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 113 AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGTIDELEK 172
           A++ +Y       P+A  L   + ++ ++K WL R ++ R    +  D     ++ ELE 
Sbjct: 120 AVEDMYCDNPPHQPVAIELWKAVKKHNLTKRWLMRIIDER---EKNLDDKAYRSMQELEN 179

Query: 173 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVK 232
           YAE+T  +LLY+TL+  G++   ADHAASHIGKA G++  L++ PYH++R + F  +P+ 
Sbjct: 180 YAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRRQVF--LPMD 239

Query: 233 VAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 292
           V   HG+   Q   +  + D   R  D V+++AS A+ HL+ AR    +VP EA P  LQ
Sbjct: 240 VCVQHGV--SQEDFLRRNQDKNVR--DVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQ 299

Query: 293 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWRGKY 341
            V  +  L  +++V FD+F   LQ+  + +P     L L   SWR +Y
Sbjct: 300 TVSLEDYLKKIQRVDFDIFHPSLQQKNMLLP-----LSLYIQSWRKRY 333

[Close]

BLAST of Clc10G03240 vs. ExPASy Swiss-Prot
Match: D3ZN43 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus OX=10116 GN=Ndufaf6 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-46
Identity = 105/288 (36.46%), Postives = 164/288 (56.94%), Query Frame = 0


Query: 53  HCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQE 112
           +C++ +R  DY  YLC L  P   +++A  LRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRK 119

Query: 113 AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGTIDELEK 172
           A++ ++       P+A  L   +  + ++K WL R ++ R    +  D     +I ELE 
Sbjct: 120 AVEDMFCDNPPHQPVAMELWKAVKRHNLTKRWLLRIIDER---EKNLDDKAYRSIRELET 179

Query: 173 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVK 232
           YAE+T S+LLY+TL+  G++   ADHAASHIGKA G++  L++ PYH++R + F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEVLGVKDVHADHAASHIGKAQGIVTCLRATPYHSSRRQVF--LPMD 239

Query: 233 VAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 292
           V   HG+   Q   +  + D   R  D V+++AS A+ HL+ AR     VP EA P  LQ
Sbjct: 240 VCVQHGV--SQEDFLRRNQDKNVR--DVVYDIASQAHLHLKHARSFHSRVPAEAFPAFLQ 299

Query: 293 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWRGKY 341
            V  +  L  +++V FD+F   LQ+    +P     L L   SWR +Y
Sbjct: 300 TVSLEDYLKKIQRVDFDIFHPSLQQKNTLLP-----LSLYIQSWRKRY 333

[Close]

BLAST of Clc10G03240 vs. ExPASy Swiss-Prot
Match: Q330K2 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens OX=9606 GN=NDUFAF6 PE=1 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-46
Identity = 107/288 (37.15%), Postives = 161/288 (55.90%), Query Frame = 0


Query: 53  HCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQE 112
           +C++ +R  DY  YLC L LP   R + F LRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 113 AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGTIDELEK 172
            ++ IY       P+A  L   +  + ++K WL + V+ R    +  D      I ELE 
Sbjct: 120 TVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDER---EKNLDDKAYRNIKELEN 179

Query: 173 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVK 232
           YAE+T S+LLY+TL+  GI+   ADHAASHIGKA G++  L++ PYH +R + F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVF--LPMD 239

Query: 233 VAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 292
           +   HG+   Q   +  + D   R  D ++++AS A+ HL+ AR    TVP +A P  LQ
Sbjct: 240 ICMLHGV--SQEDFLRRNQDKNVR--DVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQ 299

Query: 293 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWRGKY 341
            V  +  L  +++V FD+F   LQ+    +P     L L   SWR  Y
Sbjct: 300 TVSLEDFLKKIQRVDFDIFHPSLQQKNTLLP-----LYLYIQSWRKTY 333

[Close]

BLAST of Clc10G03240 vs. ExPASy Swiss-Prot
Match: Q9VYS5 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster OX=7227 GN=sicily PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 102/262 (38.93%), Postives = 148/262 (56.49%), Query Frame = 0


Query: 53  HCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMD-VATDPRIGLMRLVWWQ 112
           HC+  V  YDY +YLC L LP  +R+AAF LRAFNVE SR++     +P+I  MRL +W 
Sbjct: 55  HCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKFWH 114

Query: 113 EAIDKIY-----ASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPGT 172
           ++IDK +      S   + P+ + L   +   K++K++L+R V AR     R  T    +
Sbjct: 115 DSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTAR----ERPPTHAFES 174

Query: 173 IDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLPYHATRNRHF 232
           I ELE+Y E T S+LL + L+ GG+R   ADHAASH+GKA G+  LL+S+P      +  
Sbjct: 175 IRELEEYTEQTFSSLLLLLLEVGGVRDLNADHAASHLGKAQGIATLLRSIP--LAGRQQA 234

Query: 233 SYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARDLAGTVPREA 292
             IP++V   HG+  +   RI       + + D +F++AS AN HL+ AR L   VP + 
Sbjct: 235 PCIPLEVLVLHGVSQE---RIIRSKSDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQV 294

Query: 293 LPVLLQAVPAQVLLDSLRKVQF 309
             + L AV     L+ LR+  F
Sbjct: 295 RKIFLSAVATDAYLERLRRANF 307

[Close]

BLAST of Clc10G03240 vs. ExPASy TrEMBL
Match: A0A1S4DXI0 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.9e-169
Identity = 302/326 (92.64%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 18  MVKRARWNALAF---RWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPP 77
           MV +ARWN LA    RW+DIW+VMNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP
Sbjct: 1   MVDKARWNVLALASVRWSDIWNVMNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP 60

Query: 78  AMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 137
           AMRKAAF LRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV
Sbjct: 61  AMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 120

Query: 138 ISENKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRST 197
           ISENKISKLWLKRSVEARINDARREDTDIP TIDELEKYAEDTASTLLYMTLQAGGIRST
Sbjct: 121 ISENKISKLWLKRSVEARINDARREDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRST 180

Query: 198 AADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSR 257
            ADHAASHIGKA GLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQG   E+ LDSR
Sbjct: 181 TADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSR 240

Query: 258 ERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSR 317
           E LCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD R
Sbjct: 241 ESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPR 300

Query: 318 LQRGVLGVPPLWFQLRLKWSSWRGKY 341
           LQRGVLGV PLWFQ+RLKWSSWRGKY
Sbjct: 301 LQRGVLGVSPLWFQMRLKWSSWRGKY 326

[Close]

BLAST of Clc10G03240 vs. ExPASy TrEMBL
Match: A0A5D3D7E5 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001420 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.4e-168
Identity = 301/326 (92.33%), Postives = 307/326 (94.17%), Query Frame = 0


Query: 18  MVKRARWNALAF---RWNDIWDVMNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPP 77
           MV +ARW  LA    RWNDIW+VMNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP
Sbjct: 329 MVDKARWIVLALASVRWNDIWNVMNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP 388

Query: 78  AMRKAAFTLRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 137
           AMRKAAF LRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV
Sbjct: 389 AMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSV 448

Query: 138 ISENKISKLWLKRSVEARINDARREDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRST 197
           ISENKISKLWLKRSVEARINDARREDTDIP TIDELEKYAE TASTLLYMTLQAGGIRST
Sbjct: 449 ISENKISKLWLKRSVEARINDARREDTDIPTTIDELEKYAEGTASTLLYMTLQAGGIRST 508

Query: 198 AADHAASHIGKADGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSR 257
            ADHAASHIGKA GLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQG   E+ LDSR
Sbjct: 509 TADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSR 568

Query: 258 ERLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSR 317
           E LCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD R
Sbjct: 569 ESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPR 628

Query: 318 LQRGVLGVPPLWFQLRLKWSSWRGKY 341
           LQRGVLGV PLWFQ+RLKWSSWRGKY
Sbjct: 629 LQRGVLGVSPLWFQMRLKWSSWRGKY 654

[Close]

BLAST of Clc10G03240 vs. ExPASy TrEMBL
Match: A0A0A0L2D9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035320 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.7e-161
Identity = 288/303 (95.05%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP+MRKAAF LRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
           REDTDIP  IDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKA GLLLLLKSLP
Sbjct: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARD 277
           YHATRNRHFSYIPVKVAENHGLLAK+G R E+ LDSRE LCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 278 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWR 337
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGV PLWFQ+RLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 338 GKY 341
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of Clc10G03240 vs. ExPASy TrEMBL
Match: A0A1S3BK62 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490921 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.9e-160
Identity = 288/303 (95.05%), Postives = 292/303 (96.37%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPPAMRKAAF LRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPAMRKAAFALRAFNVETSRAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
           REDTDIP TIDELEKYAEDTASTLLYMTLQAGGIRST ADHAASHIGKA GLLLLLKSLP
Sbjct: 121 REDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRSTTADHAASHIGKASGLLLLLKSLP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARD 277
           YHATRNRHFSYIPVKVAENHGLLAKQG   E+ LDSRE LCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 278 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWR 337
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD RLQRGVLGV PLWFQ+RLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 338 GKY 341
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of Clc10G03240 vs. ExPASy TrEMBL
Match: A0A6J1DFV8 (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Momordica charantia OX=3673 GN=LOC111020431 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.4e-158
Identity = 281/303 (92.74%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNGTFASS+LRAAFSHCVQQVR+YDYHHYLCLLELPP+MRKAAF LRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           +DPRIGLMRLVWWQEAIDKIYA KKIEHPIAQALSSV+SENKISKLW+KRSVEARINDAR
Sbjct: 61  SDPRIGLMRLVWWQEAIDKIYAGKKIEHPIAQALSSVVSENKISKLWMKRSVEARINDAR 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
            EDTDIPGTIDELEKYAEDTASTL+YMTLQAGGIRST ADHAASHIGKA GLLLLLK+LP
Sbjct: 121 WEDTDIPGTIDELEKYAEDTASTLIYMTLQAGGIRSTVADHAASHIGKAGGLLLLLKALP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHLDSRERLCDAVFEMASVANAHLQKARD 277
           YHATRNRH SYIPVKVAENHGLLAKQGGR E+ LDSRE LCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHSSYIPVKVAENHGLLAKQGGRFEIQLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 278 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSSWR 337
           L GTVP+EALPVLLQAVPAQVLLDSLRKV FDVFD RLQRGVLGVPPLWFQLRLKWSSWR
Sbjct: 241 LVGTVPKEALPVLLQAVPAQVLLDSLRKVHFDVFDPRLQRGVLGVPPLWFQLRLKWSSWR 300

Query: 338 GKY 341
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of Clc10G03240 vs. TAIR 10
Match: AT1G62730.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 3.7e-127
Identity = 231/305 (75.74%), Postives = 254/305 (83.28%), Query Frame = 0


Query: 38  MNGTFASSALRAAFSHCVQQVRNYDYHHYLCLLELPPAMRKAAFTLRAFNVETSRAMDVA 97
           MNG   SS+LR+A S+CVQQVRNYDYHHYLCLLELP  MRKAAF LRAFNVET+RAMDVA
Sbjct: 1   MNGG-GSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVA 60

Query: 98  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 157
           +DP+IGLMRL+WWQEAIDK+Y  K I HP AQALS  ISE+ ISK WLKRSV+ARI DA+
Sbjct: 61  SDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDAQ 120

Query: 158 REDTDIPGTIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKADGLLLLLKSLP 217
           RE  DIP +I ELEKYAEDT STLLY TLQAGGI ST ADHAASHIGKA GL+LLLKSLP
Sbjct: 121 REVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIGKASGLVLLLKSLP 180

Query: 218 YHATRNRHFSYIPVKVAENHGLLAKQGGRIELHL--DSRERLCDAVFEMASVANAHLQKA 277
           YH TRNRH SYIP  +AE HGLL KQGGR+E+ L  DSRE L + VFE+ASVANAHL KA
Sbjct: 181 YHCTRNRHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKA 240

Query: 278 RDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVPPLWFQLRLKWSS 337
           R+LAG VP EA PVLL +VP QVLLDSL KVQFDVFD R+QRGVLGVPPL FQ +LKW S
Sbjct: 241 RELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYS 300

Query: 338 WRGKY 341
           WR  +
Sbjct: 301 WRAMF 304

The following BLAST results are available for this feature:

BLAST of Clc10G03240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900683.1	8.1e-169	92.64	PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform ...	[more]
XP_038876846.1	3.1e-168	96.46	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Beninca...	[more]
TYK19487.1	1.5e-167	92.33	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cucumis...	[more]
XP_038876847.1	4.3e-162	96.37	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Beninca...	[more]
XP_004147937.1	1.8e-160	95.05	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis sativus] >...	[more]

BLAST of Clc10G03240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7YVD7	3.7e-47	37.15	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus OX=99...	[more]
A2AIL4	1.1e-46	36.11	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus OX=...	[more]
D3ZN43	1.4e-46	36.46	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicu...	[more]
Q330K2	2.4e-46	37.15	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens OX=...	[more]
Q9VYS5	2.3e-41	38.93	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophi...	[more]

BLAST of Clc10G03240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXI0	3.9e-169	92.64	NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucum...	[more]
A0A5D3D7E5	7.4e-168	92.33	NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X1 OS=Cucum...	[more]
A0A0A0L2D9	8.7e-161	95.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035320 PE=4 SV=1	[more]
A0A1S3BK62	1.9e-160	95.05	NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 OS=Cucum...	[more]
A0A6J1DFV8	1.4e-158	92.74	NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 OS=Momordica charan...	[more]

BLAST of Clc10G03240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62730.1	3.7e-127	75.74	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 58..316 e-value: 3.0E-52 score: 177.7
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 39..311 e-value: 7.1E-47 score: 162.0
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 50..333
None	No IPR available	PANTHER	PTHR21181	FAMILY NOT NAMED	coord: 43..340
None	No IPR available	PANTHER	PTHR21181:SF13	NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6	coord: 43..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G03240.2	Clc10G03240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016740	transferase activity