
Clc10G01830 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTTAGAATATGCTTTGTCGAGGCTTTGTCCAAACAGATCGATCATATTATGTAGGTTTCCTTTGAGACCAACTTCTTTTGTTGGGGGAGATGAATATGTGAGATCAAATTATGGATGCAATCATACCAGCACTAATGCAACGGATCTCATTAGAACTCTGCAGTTAAGCGCGCACCTTCAAGAAAATATGAGATCAAATTATATGTCTACCAGGTATTATGTCCAATCCAATCCTACAATTAATACTATATTCATTTCTCTAATTTTTACTTTACTTCATTTTTGCCTTTATATTTTCAAAATTTTTATTTTGATCTCTATACTTTCAATTTTAGTTCATTTGGATTCCTATAATTTCAAAATTTTTATTTTGGTCTCTATACTCTCAATTTTCTTGGTTTTGAGGACAACCAAGAATCAAACAAAACTGATTGATTTTATAAAGAAGTAAATCAAACCAATGTCAAATAAAGAACAAATCAAATAAATCATTTATTATTGGTTTAGTTGTCGATTTTTGCCTTTTTTTTTTCTTTTAACTTTTAACTTTTATTTCTTTTCTTTTATTTTTATTTTTTTGTTTGTTTGTTTTGAATGGGGTAGTTTTGCCTTTCTTCAAATTAAAATTTGGATTTTTTTTTCTTTTAATAAAAATTTTATAGATTGCACTTGGACATTTTATTATTTACCTTGTCCTTTTTCTAAAGAACAAATATACATATATTATAATAATTAAAATATCAAAGGGGGGCATAGACTTAAAATTTAATTTTTAAGGTATATATAAACCCTCGATTTGGTTCGATTTTAATTGGAGTTTTGAATCAAAAACTGGTTTGAACCAATAATTATTTTCTCTAAATTCAAACTATATGTCCAATTTTATACTAAAAAATAAAACCAAACCAGTCAATTGCCTTGGTTTGATTTTTTGGTTTTTTGTTTGTATTCCTAGTACGTTTTGGTCAATGATTCATACGATATATTCATATATATTTTTTTGACAATATATTATGTGCGGTGGAAAAGTTGAAACTACGACATCGAGATCGATAATAAAAATAAATTTTATATGTCATTTGAGCTAATGAAAAATAATAATAATAATAATAATGTAGGACTGAAAGTCAGGAAATTGGAAGTTACAGTTTATGAAGATGGAAAAGCGATTGGATGTTTTCCAAAAGAGTTGTTTTCAAATATAAGCAATGGGGCAAAACAAGTGTGTTGGGGAGGCATTGCAGAGGCAGCGAAAAATGGAATGAGCCCTCCATTGGGCAGTGGTAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATAATGAAAACTTGGGAATGCCTCCAAAACAATCTGAACTTCAACAATATAATGGGGACTCTAATTGTTATGGTTTGCAAGATGGTAGAACTTGTGGGGGTTTTGACCAAATGTATTATTGCTTCACATATGGTGGAACAGGTGGGAGATGTGGGGCTGTTCAAAATTAA ATGGTGTTAGAATATGCTTTGTCGAGGCTTTGTCCAAACAGATCGATCATATTATGTAGGTTTCCTTTGAGACCAACTTCTTTTGTTGGGGGAGATGAATATGTGAGATCAAATTATGGATGCAATCATACCAGCACTAATGCAACGGATCTCATTAGAACTCTGCAGTTAAGCGCGCACCTTCAAGAAAATATGAGATCAAATTATATGTCTACCAGGAAATTGGAAGTTACAGTTTATGAAGATGGAAAAGCGATTGGATGTTTTCCAAAAGAGTTGTTTTCAAATATAAGCAATGGGGCAAAACAAGTGTGTTGGGGAGGCATTGCAGAGGCAGCGAAAAATGGAATGAGCCCTCCATTGGGCAGTGGTAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATAATGAAAACTTGGGAATGCCTCCAAAACAATCTGAACTTCAACAATATAATGGGGACTCTAATTGTTATGGTTTGCAAGATGGTAGAACTTGTGGGGGTTTTGACCAAATGTATTATTGCTTCACATATGGTGGAACAGGTGGGAGATGTGGGGCTGTTCAAAATTAA ATGGTGTTAGAATATGCTTTGTCGAGGCTTTGTCCAAACAGATCGATCATATTATGTAGGTTTCCTTTGAGACCAACTTCTTTTGTTGGGGGAGATGAATATGTGAGATCAAATTATGGATGCAATCATACCAGCACTAATGCAACGGATCTCATTAGAACTCTGCAGTTAAGCGCGCACCTTCAAGAAAATATGAGATCAAATTATATGTCTACCAGGAAATTGGAAGTTACAGTTTATGAAGATGGAAAAGCGATTGGATGTTTTCCAAAAGAGTTGTTTTCAAATATAAGCAATGGGGCAAAACAAGTGTGTTGGGGAGGCATTGCAGAGGCAGCGAAAAATGGAATGAGCCCTCCATTGGGCAGTGGTAATTTACCTAATGGAAACTTTAGGGTTGCATGTTACATTAGAGGAATTAGATATGTGAATAATGAAAACTTGGGAATGCCTCCAAAACAATCTGAACTTCAACAATATAATGGGGACTCTAATTGTTATGGTTTGCAAGATGGTAGAACTTGTGGGGGTTTTGACCAAATGTATTATTGCTTCACATATGGTGGAACAGGTGGGAGATGTGGGGCTGTTCAAAATTAA MVLEYALSRLCPNRSIILCRFPLRPTSFVGGDEYVRSNYGCNHTSTNATDLIRTLQLSAHLQENMRSNYMSTRKLEVTVYEDGKAIGCFPKELFSNISNGAKQVCWGGIAEAAKNGMSPPLGSGNLPNGNFRVACYIRGIRYVNNENLGMPPKQSELQQYNGDSNCYGLQDGRTCGGFDQMYYCFTYGGTGGRCGAVQN Homology
BLAST of Clc10G01830 vs. NCBI nr
Match: XP_022145286.1 (uncharacterized protein LOC111014774 [Momordica charantia]) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-23 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Clc10G01830 vs. NCBI nr
Match: ESR41651.1 (hypothetical protein CICLE_v10012304mg [Citrus clementina] >GAY65763.1 hypothetical protein CUMW_243520 [Citrus unshiu]) HSP 1 Score: 119.4 bits (298), Expect = 3.5e-23 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Clc10G01830 vs. NCBI nr
Match: XP_024038072.1 (uncharacterized protein LOC18039972 [Citrus clementina] >XP_024948531.1 uncharacterized protein LOC112495883 [Citrus sinensis]) HSP 1 Score: 119.4 bits (298), Expect = 3.5e-23 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Clc10G01830 vs. NCBI nr
Match: KDO46423.1 (hypothetical protein CISIN_1g045979mg [Citrus sinensis]) HSP 1 Score: 118.2 bits (295), Expect = 7.9e-23 Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc10G01830 vs. NCBI nr
Match: OMP03993.1 (hypothetical protein COLO4_10040 [Corchorus olitorius]) HSP 1 Score: 115.5 bits (288), Expect = 5.1e-22 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Clc10G01830 vs. ExPASy TrEMBL
Match: A0A6J1CVW9 (uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014774 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Clc10G01830 vs. ExPASy TrEMBL
Match: V4SWW2 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012304mg PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Clc10G01830 vs. ExPASy TrEMBL
Match: A0A2H5QMC5 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_243520 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of Clc10G01830 vs. ExPASy TrEMBL
Match: A0A067DUA4 (Neprosin domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045979mg PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.8e-23 Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Clc10G01830 vs. ExPASy TrEMBL
Match: A0A1R3KA97 (Neprosin domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_10040 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Clc10G01830 vs. TAIR 10
Match: AT5G11660.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13 Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 0
BLAST of Clc10G01830 vs. TAIR 10
Match: AT2G35250.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10 Identity = 35/113 (30.97%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of Clc10G01830 vs. TAIR 10
Match: AT4G23390.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10 Identity = 40/133 (30.08%), Postives = 65/133 (48.87%), Query Frame = 0
BLAST of Clc10G01830 vs. TAIR 10
Match: AT5G25415.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Clc10G01830 vs. TAIR 10
Match: AT5G25410.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10 Identity = 42/142 (29.58%), Postives = 65/142 (45.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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