Clc10G00940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc10G00940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Homer protein
Location	ClcChr10: 877651 .. 880540 (-)
RNA-Seq Expression	Clc10G00940
Synteny	Clc10G00940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTTTTTTTACTCTTTGATGTGAGATTATCAAAAAGAAATTTTACCCATGTTGAATGGCCTTTCTCACTCTCTTTTCTCTCGTAGATCGCTCTCCTCTCTCTCTCACGGTTTCGCTATGCAATGCAAACTAAATAGAGGGGAGAAGAAGAAGACCGAAGTTATTCATATGGACTCGTCAAGTTGGTGTATGATTTCATCGAAAGTTGGTCACATCGAAGAAGAAAAGTAAAAAAGAAGGAGAAAAAGAAGAAATAAGGGTAATTTTCTAAAATTGCTTAATAATAAAAAGAATTTTTTTTTTTTAAAGTTCTAAAAAATGAAGCGAAAATTATTTTAGGCTTTCAGAATAGATCTTTTAATCGATTTTTAATCCATTTTCCCCAAGTTGAAGGGCACTTATTTTATAATTTAACAAAAAAAAAAAAAAAAAAAACTTATATATATTCGACAAAAGTTCAAAAATGTGTGGAGTTAAAAAAGGAAGTTATCGTCTTCATTGCACAGCCAAAAAAAAAAAAAAAAAGAAGAAAAATGTCTTCAACAATCAAACACTCATTTCTTTCTTCTTCAAATCCAATGTATCTCGCCGCAATCTCCACGAACTTCCTCAAATCCCTCCCTTCCTCCACCAACATCTCCCACAAACGTTCAAGTTTCTCAAAACCTCGTCTCAAAATCGTAAAATGTAGCTCCGAATCGAACGATCAAGCTCAAAACGATTTCAATTTGAAGAATGCTCTGTCCAGCATGGTCGGTGAGCAAGTTGAGGAGCTTTTGAACAGGGAAGAGAACAGGAGTTTGCTCGATGGATTGGAGAAGGCGTCAATGAGAGTTGAAATCGCGAAAAAACAGCTTGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATTATGTTAGCCAGCTCGAAAATAGAGCATCGGAGGTATGTTAATTAGTTTCTTGCATACTTTGTTGTCCGATATACCAAGAAATTGATTGATTGCGAAGTATTTCTTTCTTAATTATTTGAGCTTTGGCGTTTATTAGTCAATCTTTATTTCTTTCGTTATTTGTTTCAATCCAAAGCAAGAAATCCAGGATGCAAAAATTTAGGATTATATATAGCAACTCGAAAATAGAGCTTCAAAGTTAGTTAATCTTTTAGATACTCCTCATGTGCGACAAAACACTCCTTTCATATCTGTCTAATTGCAAACCAAGAACATGAGATGCTATAAGGTTCAAGGATAAAGGATTATATTAAATAGCTTGAAAACGTGGCTTCAGAGGTTTGTTAATCTTTTAGTTACTCCTGTTGTACAATCAAGTGTTCTTTCTTTCATTTTCAATCGTAATGCACACCAAAAAATCCTCTAGGATTCAAGGATTATATTAACCAGCTCACAGTTTGTTTAATTCATCTGTTACCTACTCTTGTTGTGTGATAAAGCACTCTTGTGTTTTGCCCGTGAGGATGCTCTAAGATTCAAGGATTATATTAGCTCCCCGAAAACCGAGCTTTAGAGGTTTGTTAATCACTTACATACTCTTGTTGAACCTGTTTGTATGCAAACCAAGAAATTGAGGATGCTCTAGAGTCTAAGGTGTGCATTTTGCAAATTTATTTTCTTCGTGGCTGTTTAGAATTGTATTTAGTGAAATAGGAATCCTTGCTTCTAATGAAAGATGGTCAATTTGAATTGACTTTCTAAGTGTTTGCGTTCTTACATGGCATGGAAAAAAGTCAATCCAAACAAGTTCAAAATATGTCTTTGTTAACAATTATTACAGCAAATTTCAGCTGAGAGGCCGTGAACTGGGGGTTGATTCAGGTGAGAAAAAAAATGTTCAACTTTACTTTATTTGATCCAGTGTAAAATTGAGCCACTTTTTAAAATTCCTTCATTTCGTGAAGGCGTAGCCTAGTAATCCTCCTGACCCAATCATTTTGAATTGTTGTATAACCAATGGGCTGGGTAGCAACTAAAATCCTTCGCTTATTGAAGTCGATTATACGTGTTGTTTCAAAACTTTTGATGTCAACTGAGAACAATAATAGCATGTGGGTCATCTTTCTCATTTAAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATTGAGGCGGCCGAGCGCTCTCTCGCACAAAGCGAGGGTGGAAATGCTATAAGAGATGGGGAAGATGGGGGACTTGACAGAGATGAAGAGAGATTGGAGTCCGTAAAAGCAGCGTCCATATCAGCCATTGTCGGTACACTTGCAGGGCTGCCAATCTTTCTTAATCAAGTGACCAGCCCTTCTCAGCTTCTACTCCCTACAGTAATCACATTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACGATAAGGAGAGACTTGGATAATATTCAGCTTAAGACTGGAACATCTGCCGCTTTTGGCTTCGTTAAAGGTACCGAAAATAGCTCATTGAATAAATAATTGAATTATCTAGTAGAATAATTCAGTGGTTAAAGACACTAATTACCATCTCAAAAGTCGATAGAGACTATTGAACTAAATAAAATACTTATTAAAAAGAATTGAATTATCTAAACACAGTGAGGATTGAGAAAGTTATGTTGTTGATAAATGCAGGTCTTGCAACCCTAGATGGTGGAGTCCCTCTGGAGTTGAATGCTGAGAGTTTCTCCTCGCACGTTGTTGATGCTGCTGTGTATGTATCTGAAAACCTTTATGTATTTATTTCTGCTGCTGTTGCACTGGATTACTGTTTCAAGATGAGGTTATTGAGCCCTTTTCCTATAAGAAAATCAATATCAAGGGTTAATTAGATATAAAGATATAAACTTCATTTCAAGAAGATTAAACTCGGTTCATGTTTTCCCTCAACCAATGGG

mRNA sequence

ATGAGAAAAATGTCTTCAACAATCAAACACTCATTTCTTTCTTCTTCAAATCCAATGTATCTCGCCGCAATCTCCACGAACTTCCTCAAATCCCTCCCTTCCTCCACCAACATCTCCCACAAACGTTCAAGTTTCTCAAAACCTCGTCTCAAAATCGTAAAATGTAGCTCCGAATCGAACGATCAAGCTCAAAACGATTTCAATTTGAAGAATGCTCTGTCCAGCATGGTCGGTGAGCAAGTTGAGGAGCTTTTGAACAGGGAAGAGAACAGGAGTTTGCTCGATGGATTGGAGAAGGCGTCAATGAGAGTTGAAATCGCGAAAAAACAGCTTGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATTATGTTAGCCAGCTCGAAAATAGAGCATCGGAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATTGAGGCGGCCGAGCGCTCTCTCGCACAAAGCGAGGGTGGAAATGCTATAAGAGATGGGGAAGATGGGGGACTTGACAGAGATGAAGAGAGATTGGAGTCCGTAAAAGCAGCGTCCATATCAGCCATTGTCGGTACACTTGCAGGGCTGCCAATCTTTCTTAATCAAGTGACCAGCCCTTCTCAGCTTCTACTCCCTACAGTAATCACATTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACGATAAGGAGAGACTTGGATAATATTCAGCTTAAGACTGGAACATCTGCCGCTTTTGGCTTCGTTAAAGGTCTTGCAACCCTAGATGGTGGAGTCCCTCTGGAGTTGAATGCTGAGAGTTTCTCCTCGCACGTTGTTGATGCTGCTGTGTATGTATCTGAAAACCTTTATGTATTTATTTCTGCTGCTGTTGCACTGGATTACTGTTTCAAGATGAGGTTATTGAGCCCTTTTCCTATAAGAAAATCAATATCAAGGGTTAATTAGATATAAAGATATAAACTTCATTTCAAGAAGATTAAACTCGGTTCATGTTTTCCCTCAACCAATGGG

Coding sequence (CDS)

ATGAGAAAAATGTCTTCAACAATCAAACACTCATTTCTTTCTTCTTCAAATCCAATGTATCTCGCCGCAATCTCCACGAACTTCCTCAAATCCCTCCCTTCCTCCACCAACATCTCCCACAAACGTTCAAGTTTCTCAAAACCTCGTCTCAAAATCGTAAAATGTAGCTCCGAATCGAACGATCAAGCTCAAAACGATTTCAATTTGAAGAATGCTCTGTCCAGCATGGTCGGTGAGCAAGTTGAGGAGCTTTTGAACAGGGAAGAGAACAGGAGTTTGCTCGATGGATTGGAGAAGGCGTCAATGAGAGTTGAAATCGCGAAAAAACAGCTTGCTGAGATCGAGAAACAGGAACTTGAGCTCAAACGATTCAAGGATTATGTTAGCCAGCTCGAAAATAGAGCATCGGAGATTGAAGAATGTCAAAAGGAGATATTGGAGGCAAGAGGGATGATTGAGGCGGCCGAGCGCTCTCTCGCACAAAGCGAGGGTGGAAATGCTATAAGAGATGGGGAAGATGGGGGACTTGACAGAGATGAAGAGAGATTGGAGTCCGTAAAAGCAGCGTCCATATCAGCCATTGTCGGTACACTTGCAGGGCTGCCAATCTTTCTTAATCAAGTGACCAGCCCTTCTCAGCTTCTACTCCCTACAGTAATCACATTTATTAGCTGTGCCTTGTTTGGAGTTACATTCCGATACACGATAAGGAGAGACTTGGATAATATTCAGCTTAAGACTGGAACATCTGCCGCTTTTGGCTTCGTTAAAGGTCTTGCAACCCTAGATGGTGGAGTCCCTCTGGAGTTGAATGCTGAGAGTTTCTCCTCGCACGTTGTTGATGCTGCTGTGTATGTATCTGAAAACCTTTATGTATTTATTTCTGCTGCTGTTGCACTGGATTACTGTTTCAAGATGAGGTTATTGAGCCCTTTTCCTATAAGAAAATCAATATCAAGGGTTAATTAG

Protein sequence

MRKMSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQAQNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKRFKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERLESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYCFKMRLLSPFPIRKSISRVN

Homology

[Close]

BLAST of Clc10G00940 vs. NCBI nr
Match: XP_008448570.1 (PREDICTED: uncharacterized protein LOC103490708 [Cucumis melo] >ADN33930.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0052973.1 uncharacterized protein E6C27_scaffold344G00830 [Cucumis melo var. makuwa] >TYK11429.1 uncharacterized protein E5676_scaffold139G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 294/319 (92.16%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           M++TIKHSFLSSSNP++L  ISTNFLKS PSST I HKR  FS PRLKI+KC+SESNDQA
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNAIRDGEDGGLDRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVK ASISAIVGTLAGLPIFLNQV S SQLLLPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLEL+AESFSSHV+DAAVYVSENLY+FI AAVALDYC
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKM LLSPFPIRKSISRVN
Sbjct: 301 FKMSLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. NCBI nr
Match: XP_038876566.1 (uncharacterized protein LOC120068995 [Benincasa hispida])

HSP 1 Score: 538.5 bits (1386), Expect = 3.9e-149
Identity = 292/319 (91.54%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           MS+TIKH FLS SNP++LA IST FLKS  SSTN+SHKR  FS PRLKIVKCSS+SND+A
Sbjct: 1   MSATIKHLFLSPSNPIHLATISTKFLKSHLSSTNVSHKRLGFSTPRLKIVKCSSDSNDEA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           +NDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIA+KQLAEIEKQELELKR
Sbjct: 61  RNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIARKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNA+RDGEDG LDRDEERL
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAVRDGEDGALDRDEERL 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQVTS S LLLPT ITFISCALFGVTFRYT+RRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVTSTSPLLLPTAITFISCALFGVTFRYTVRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGT+AAFGFVKGLATLDGGVPLELNAES SSHV DAAVYVSENLYVFISAAVALDYC
Sbjct: 241 QLKTGTAAAFGFVKGLATLDGGVPLELNAESLSSHVFDAAVYVSENLYVFISAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKMRLLSPFPIRKSISRVN
Sbjct: 301 FKMRLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. NCBI nr
Match: XP_004146131.1 (uncharacterized protein LOC101213449 [Cucumis sativus] >KAE8650008.1 hypothetical protein Csa_011300 [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 9.7e-148
Identity = 291/319 (91.22%), Postives = 301/319 (94.36%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           M++TIK S LSSSNP++L  ISTNFLKS PSST I HKR  FS PRLKI+KC+SESNDQA
Sbjct: 1   MAATIKLSILSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QNDF+LKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR
Sbjct: 61  QNDFSLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNAIRDGEDGGLDRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQV S SQLLLPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGT AAFGFVKGLATLDGGVPLEL+AESFSSHV+DAAVYVSENLY+FI AAVALDYC
Sbjct: 241 QLKTGTFAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKM LLSPFPIRKSISRVN
Sbjct: 301 FKMSLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. NCBI nr
Match: XP_022923575.1 (uncharacterized protein LOC111431219 [Cucurbita moschata])

HSP 1 Score: 515.8 bits (1327), Expect = 2.7e-142
Identity = 279/315 (88.57%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           MS+TIKHSFLS SNP++L+AISTNFLKS PSS  ISHK   FS PRLKIVKCSSESND+A
Sbjct: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHKPLGFSTPRLKIVKCSSESNDEA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDY++QLE+RASEIEECQKEILEARGMIE AERSL+QSEGGNA RD EDGG+DRDEERL
Sbjct: 121 FKDYINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDVEDGGIDRDEERL 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQVTS SQL LPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLE NAESFSSHV DAAVYVSENLY+FISAAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300

Query: 304 FKMRLLSPFPIRKSI 319
           FKMRLLSPFPIRKS+
Sbjct: 301 FKMRLLSPFPIRKSV 315

[Close]

BLAST of Clc10G00940 vs. NCBI nr
Match: KAG7015805.1 (hypothetical protein SDJN02_23443 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 514.2 bits (1323), Expect = 8.0e-142
Identity = 278/315 (88.25%), Postives = 296/315 (93.97%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           MS+TIKHSFLS SNP++L+AISTNFLKS PSS  ISHK   FS PRLKIVKCSSESND+A
Sbjct: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHKPLGFSTPRLKIVKCSSESNDEA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDY++QLE+RASEIEECQKEILEARGMIE AERSL+QSEGGNA RD EDGG+DRDEERL
Sbjct: 121 FKDYINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERL 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQVTS SQL LP  ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPAAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLE NAESFSSHV DAAVYVSENLY+FISAAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300

Query: 304 FKMRLLSPFPIRKSI 319
           FKMRLLSPFPIRKS+
Sbjct: 301 FKMRLLSPFPIRKSV 315

[Close]

BLAST of Clc10G00940 vs. ExPASy TrEMBL
Match: A0A5A7UAK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00840 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-151
Identity = 294/319 (92.16%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           M++TIKHSFLSSSNP++L  ISTNFLKS PSST I HKR  FS PRLKI+KC+SESNDQA
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNAIRDGEDGGLDRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVK ASISAIVGTLAGLPIFLNQV S SQLLLPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLEL+AESFSSHV+DAAVYVSENLY+FI AAVALDYC
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKM LLSPFPIRKSISRVN
Sbjct: 301 FKMSLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. ExPASy TrEMBL
Match: E5RDC3 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-151
Identity = 294/319 (92.16%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           M++TIKHSFLSSSNP++L  ISTNFLKS PSST I HKR  FS PRLKI+KC+SESNDQA
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNAIRDGEDGGLDRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVK ASISAIVGTLAGLPIFLNQV S SQLLLPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLEL+AESFSSHV+DAAVYVSENLY+FI AAVALDYC
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKM LLSPFPIRKSISRVN
Sbjct: 301 FKMSLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. ExPASy TrEMBL
Match: A0A1S3BK07 (uncharacterized protein LOC103490708 OS=Cucumis melo OX=3656 GN=LOC103490708 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-151
Identity = 294/319 (92.16%), Postives = 303/319 (94.98%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           M++TIKHSFLSSSNP++L  ISTNFLKS PSST I HKR  FS PRLKI+KC+SESNDQA
Sbjct: 1   MAATIKHSFLSSSNPIHLPPISTNFLKSHPSSTKICHKRLGFSTPRLKILKCTSESNDQA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR
Sbjct: 61  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDYVSQLENRASEIEECQKEILEARGMIE AERSLAQSEGGNAIRDGEDGGLDRDEER 
Sbjct: 121 FKDYVSQLENRASEIEECQKEILEARGMIEEAERSLAQSEGGNAIRDGEDGGLDRDEERF 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVK ASISAIVGTLAGLPIFLNQV S SQLLLPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKVASISAIVGTLAGLPIFLNQVNSTSQLLLPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLEL+AESFSSHV+DAAVYVSENLY+FI AAVALDYC
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLELSAESFSSHVIDAAVYVSENLYIFICAAVALDYC 300

Query: 304 FKMRLLSPFPIRKSISRVN 323
           FKM LLSPFPIRKSISRVN
Sbjct: 301 FKMSLLSPFPIRKSISRVN 319

[Close]

BLAST of Clc10G00940 vs. ExPASy TrEMBL
Match: A0A6J1EC82 (uncharacterized protein LOC111431219 OS=Cucurbita moschata OX=3662 GN=LOC111431219 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142
Identity = 279/315 (88.57%), Postives = 297/315 (94.29%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           MS+TIKHSFLS SNP++L+AISTNFLKS PSS  ISHK   FS PRLKIVKCSSESND+A
Sbjct: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHKPLGFSTPRLKIVKCSSESNDEA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKDY++QLE+RASEIEECQKEILEARGMIE AERSL+QSEGGNA RD EDGG+DRDEERL
Sbjct: 121 FKDYINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDVEDGGIDRDEERL 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQVTS SQL LPT ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPTAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLE NAESFSSHV DAAVYVSENLY+FISAAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300

Query: 304 FKMRLLSPFPIRKSI 319
           FKMRLLSPFPIRKS+
Sbjct: 301 FKMRLLSPFPIRKSV 315

[Close]

BLAST of Clc10G00940 vs. ExPASy TrEMBL
Match: A0A6J1HQG8 (uncharacterized protein LOC111465167 OS=Cucurbita maxima OX=3661 GN=LOC111465167 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 276/315 (87.62%), Postives = 296/315 (93.97%), Query Frame = 0


Query: 4   MSSTIKHSFLSSSNPMYLAAISTNFLKSLPSSTNISHKRSSFSKPRLKIVKCSSESNDQA 63
           MS+TIKHSFLS SNP++L+AISTNFLKS PSS  ISH   SFS PRLKIVKCSSESND+A
Sbjct: 1   MSATIKHSFLSPSNPIHLSAISTNFLKSHPSSMIISHIPLSFSTPRLKIVKCSSESNDEA 60

Query: 64  QNDFNLKNALSSMVGEQVEELLNREENRSLLDGLEKASMRVEIAKKQLAEIEKQELELKR 123
           QN+ NL NALSSMVGEQ+EELLN+EENRSLLDGLEKASMRVEIAK+QLAEIEKQELELKR
Sbjct: 61  QNNVNLNNALSSMVGEQIEELLNKEENRSLLDGLEKASMRVEIAKRQLAEIEKQELELKR 120

Query: 124 FKDYVSQLENRASEIEECQKEILEARGMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERL 183
           FKD+++QLE+RASEIEECQKEILEARGMIE AERSL+QSEGGNA RD EDGG+DRDEERL
Sbjct: 121 FKDHINQLESRASEIEECQKEILEARGMIEEAERSLSQSEGGNAKRDEEDGGIDRDEERL 180

Query: 184 ESVKAASISAIVGTLAGLPIFLNQVTSPSQLLLPTVITFISCALFGVTFRYTIRRDLDNI 243
           ESVKAASISAIVGTLAGLPIFLNQVTS SQL LP  ITFISCALFGVTFRYTIRRDLDNI
Sbjct: 181 ESVKAASISAIVGTLAGLPIFLNQVTSISQLALPLAITFISCALFGVTFRYTIRRDLDNI 240

Query: 244 QLKTGTSAAFGFVKGLATLDGGVPLELNAESFSSHVVDAAVYVSENLYVFISAAVALDYC 303
           QLKTGTSAAFGFVKGLATLDGGVPLE NAESFSSHV DAAVYVSENLY+FISAAVAL++C
Sbjct: 241 QLKTGTSAAFGFVKGLATLDGGVPLEFNAESFSSHVTDAAVYVSENLYIFISAAVALEFC 300

Query: 304 FKMRLLSPFPIRKSI 319
           FK+RLLSPFPIRKS+
Sbjct: 301 FKLRLLSPFPIRKSV 315

[Close]

BLAST of Clc10G00940 vs. TAIR 10
Match: AT4G24090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 271.6 bits (693), Expect = 8.4e-73
Identity = 154/284 (54.23%), Postives = 205/284 (72.18%), Query Frame = 0


Query: 31  SLPSSTNISHKRSSFSKPRLKIVKCSSESNDQAQND-FNLKNALSSMVGEQVEELLNREE 90
           +L +   ++   S + + R   ++ SSE N    +D  +LKN+LS +VG QVEELL+REE
Sbjct: 22  NLLNPKQLTASSSQYRRTRNWRIRSSSEDNVAISSDGGDLKNSLSGIVGNQVEELLSREE 81

Query: 91  NRSLLDGLEKASMRVEIAKKQLAEIEKQELELKRFKDYVSQLENRASEIEECQKEILEAR 150
           N+ LLDGLEKAS+RVEIAK++L +IE+QE+E K  +DY++QLE+RA+EI ECQ+EI  AR
Sbjct: 82  NKGLLDGLEKASLRVEIAKRELEDIERQEIEAKLLQDYINQLESRAAEIAECQQEIDAAR 141

Query: 151 GMIEAAERSLAQSEGGNAIRDGEDGGLDRDEERLESVKAASISAIVGTLAGLPIFLNQVT 210
            M+E AERSL+ ++        +   +D+D+ERLES KAA I+A VGT+A LP  L+QV 
Sbjct: 142 SMVEEAERSLSLADNSTIGSSEKGYSIDKDKERLESAKAAVIAAAVGTIAELPFALSQVA 201

Query: 211 SPSQLLLPTVITFISCALFGVTFRYTIRRDLDNIQLKTGTSAAFGFVKGLATLDGGVPLE 270
           S  QL+LP  I F SCALFGVTFRY +RRDLD+  LK+G  AAFGFVKGL  L  G PLE
Sbjct: 202 SMEQLVLPLGIAFASCALFGVTFRYAVRRDLDDNHLKSGAVAAFGFVKGLGMLSRGPPLE 261

Query: 271 LNAESFSSHVVDAAVYVSENLYVFISAAVALDYCFKMRLLSPFP 314
           L+ ES  SH +D AV VS+++ +F  A++ LD+CFKM+LL PFP
Sbjct: 262 LSWESLFSHGIDGAVLVSQSVLIFAFASIGLDFCFKMKLLRPFP 305

The following BLAST results are available for this feature:

BLAST of Clc10G00940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448570.1	1.6e-150	92.16	PREDICTED: uncharacterized protein LOC103490708 [Cucumis melo] >ADN33930.1 hypot...	[more]
XP_038876566.1	3.9e-149	91.54	uncharacterized protein LOC120068995 [Benincasa hispida]	[more]
XP_004146131.1	9.7e-148	91.22	uncharacterized protein LOC101213449 [Cucumis sativus] >KAE8650008.1 hypothetica...	[more]
XP_022923575.1	2.7e-142	88.57	uncharacterized protein LOC111431219 [Cucurbita moschata]	[more]
KAG7015805.1	8.0e-142	88.25	hypothetical protein SDJN02_23443 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc10G00940 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc10G00940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAK6	7.8e-151	92.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5RDC3	7.8e-151	92.16	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BK07	7.8e-151	92.16	uncharacterized protein LOC103490708 OS=Cucumis melo OX=3656 GN=LOC103490708 PE=...	[more]
A0A6J1EC82	1.3e-142	88.57	uncharacterized protein LOC111431219 OS=Cucurbita moschata OX=3662 GN=LOC1114312...	[more]
A0A6J1HQG8	1.2e-140	87.62	uncharacterized protein LOC111465167 OS=Cucurbita maxima OX=3661 GN=LOC111465167...	[more]

BLAST of Clc10G00940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24090.1	8.4e-73	54.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	COILS	Coil	Coil	coord: 97..134
None	No IPR available	PANTHER	PTHR36383:SF1	OS09G0529350 PROTEIN	coord: 35..317
None	No IPR available	PANTHER	PTHR36383	OS09G0529350 PROTEIN	coord: 35..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc10G00940.2	Clc10G00940.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane