Clc09G23075 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G23075
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr09: 36426586 .. 36429449 (-)
RNA-Seq ExpressionClc09G23075
SyntenyClc09G23075
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACATTAAGCCCTGGTTGCTGCACATTGTTGTTAAGCAAGATCATTAAGAAGTGAAATGACAGTGATTTTTCAGTCTCAATACTGATAATATTATCCTGAACATACCCAATTTGTTGTTGCTTGAATGATCCCAATGGGTAAGGTGAAGAACAGCGCAATCCCACAAGCTAGTAAAATTCCCCACCAGGGGAGTTGGAGTTGTTTTTCGAAACCTTCACAAGCATACAAGGCCAGAGCCACCATTATTATCAATACGGCGTAAAACCACCACTGAGGAACTGCCTTGTAATTCTTCTTCATCAGTCTAGTGTGCACATCTCCCAGCTGATCCCCAACTGAACTTGCTGTCCTTCTCCACATCTGCCAGATTGTTCTGGTAACAATTTCCAAAGCAGAAGACAGAAAAAAAGGTTGAAAAGATTGAAATGAGAAGGAATGACTTTGTTAAAATAGAGTTCTAGAATTGGTTTCAAAAGGTTAGTGTTTGTGGAGCTTACTTTCCATGGAAAACAGCAACATGTGAGACAGTTGCTGTCAATGTAGCAAAACTCAACCCGTAATTAAAAGCAAAGAAGGCGCTGAGGTAGAGTTTGCTATAACCATCATAGTTTGCTTGATCTATGTCAAATGTCGTGGCATTAAGAATTCGAGAAATATTGTATGTTTTACCAGTGAAGTCAAAAGTGTGAGCTGAAATCATGGGAAATCGCTTAGCTTCATAAAGATTTGACCAGTAGACAATGGGGTTTATTACATAGACGACCACGAAAAACCCAATTAAGGTATTGACGATTGCAAAGCCAGGTGAGGCCAGAGGGCTTCCCAGGAAGCCAGCAACAGTAGACCAATCAATCCCGAATGAGCCAATGCCGAGGCCGCGAAGACCGGAACCAATTTGTTGGGCAGTAATGGAGTTTCTCCATATCAAACAAACAAATGAGATGCAAGATATTGAGGGGAAGAGGTAGCTTGGGACGAGGTAGTAAGCGAAACTCGATATAAAAACCATGAAGAAGAATTGTAGCCTTTTATGGCCTCCTCTTGGTCTCTTGTCTTTCTCATGCAATGCCCTGAACAACTCCCAGATATTTGAGATGAGGTAAGGTTCATTTTATTGACAATGTTTTCTTTCATAACTAAAACACTCGATTCAGATTTGCCAATCAAAGATGTTTAAGTTTCAGTTCTTGAAGAAAGTACCTGAATAGAGAGACCTGAACTAGATTTGCAGGCCACCACATATATGGGGAGTCGACTAGGTATCTTCTGAACAACCCAGCCCATCCGTATCCTAGCATCTGCTCATTTCCAATCACTCAGAAAAATATAGTAGAATTGCACCAACCAAAAAAATGAAAATGGGTATAATGGGAGAATATATTTTTAGTTTTGATATGTAAAAGCATCGGACAAACACAATCTGGCTGAAGCAATCTAAAGATAGAGAAGCTTATTGAGCCTAATGAAGTAAATTAGAAGAGACCTGAGTGGTTTGGGACAACAACATGGCTGCTAGAGGATGGAGATTTCTGTGGTAAAATGCCTTAACAATCGTGACTATATTCAAAGCGTAGACACTATTCGATCCAGAATTGGCGAAAATGGTGATCAGGACATGTTCTTTGAGAGTAAACGGCCCTGGATTCAACGAAAACGACCATTTGGTAAGTGGAATTTGAACTGAGGTAGATGGAATTGTTGCAGCCATCAATTTTCCCAGAGGAAGAACAAGAATCTGCGCAGAGACTGAAGAAACATAAAGCGGATTCTGGCGAAAACCAAAGAATTGGTTTACAAAAGCCAAAAGACAGCAAGATGTAAGCCCAAGAACCCATGTTCTGAATGTTAACGCTGGCTCTGAAGGGTCATCAGTTGGCGGAACTGTCAGCCTTACTTCCTCAATTGGACTGTCATTCTCCTCCTCCTCCCCTGCATTACCAAATTTCACAAATCTTATTCTGAACAGACATCATCCTTCATGGGAAAAGGATATGAACCCATATATATATATATGTATGTATTTTCCTCTTCAAAAGGTTGAAAATGCTGATAAAGTTCCATGGAAGAAGAAGAAGAAAACAGAAATTTTCTCACGAGTTTTTTCGAAGTTGGATTCAAGATTTTCCTCTGGTAGGTTGAATTGAGGGATCCCATCCCCATCTTTACCTTTTGTCATCTTCTCCTTCTCCTTCTCCTTCCTGCAGTTACACTATTATTTTATAAGAAAGAACCAGGAAGTCTATAGAAAAATGTACTTTATTTTCTGATTCTCTAGAATCTCTACTAATAATAATGCTTGTTTTCTCTCTTTTAAAAAAAGACATTCTAGGACTCACAGAAATACGATGAAAAGAGCAAAAGATGCTGTTCACTCTTTTGCAGAAGTGGGTTTTTAATGCACCTCCCAAAGCAAGCGGTTCAGAATATCAAGGAGGCCACAAAATCTTCCAAGTAAAAGGTATTCTCAGACCTATATTTTCCGATTTCATTTATCCAAAAACCCAATTATTAGGTGAGACATTAAATGAGTTTTTAGACGTAGCTTTTTTATTCTATAATCTTGAATTTAGACGGATTTATTAAGCACATGGGGGGATTGCTTTATACAGGCCCCAACTGCAAAATCTTCTGGTTTTTATATAGTCACATTTGAAAGCTCCTTAAAAAGAGGGCCTTTTTGGCTTAAACTTGAGGATAAGGACAACTATTTTGAACTCGAGAAGATGATGATGGGGCATGGTCGTGTAGACTTTTTAATGCTTCATATCACTACAGATTCTCACCGTTTTGGCTTCCAACCAAGGTGAAGTTGTGGTCCAATTCCTTTTTTCTTTCTTTTTTTATTTTATAGATCCATTTGA

mRNA sequence

ATCACATTAAGCCCTGGTTGCTGCACATTGTTGTTAAGCAAGATCATTAAGAAGTGAAATGACAGTGATTTTTCAGTCTCAATACTGATAATATTATCCTGAACATACCCAATTTGTTGTTGCTTGAATGATCCCAATGGGTAAGGTGAAGAACAGCGCAATCCCACAAGCTAGTAAAATTCCCCACCAGGGGAGTTGGAGTTGTTTTTCGAAACCTTCACAAGCATACAAGGCCAGAGCCACCATTATTATCAATACGGCGTAAAACCACCACTGAGGAACTGCCTTGTAATTCTTCTTCATCAGTCTAGTGTGCACATCTCCCAGCTGATCCCCAACTGAACTTGCTGTCCTTCTCCACATCTGCCAGATTGTTCTGTCCATGGAAAACAGCAACATGTGAGACAGTTGCTGTCAATGTAGCAAAACTCAACCCGTAATTAAAAGCAAAGAAGGCGCTGAGGTAGAGTTTGCTATAACCATCATAGTTTGCTTGATCTATGTCAAATGTCGTGGCATTAAGAATTCGAGAAATATTGTATGTTTTACCAGTGAAGTCAAAAGTGTGAGCTGAAATCATGGGAAATCGCTTAGCTTCATAAAGATTTGACCAGTAGACAATGGGGTTTATTACATAGACGACCACGAAAAACCCAATTAAGGTATTGACGATTGCAAAGCCAGGTGAGGCCAGAGGGCTTCCCAGGAAGCCAGCAACAGTAGACCAATCAATCCCGAATGAGCCAATGCCGAGGCCGCGAAGACCGGAACCAATTTGTTGGGCAGTAATGGAGTTTCTCCATATCAAACAAACAAATGAGATGCAAGATATTGAGGGGAAGAGGTAGCTTGGGACGAGGTAGTAAGCGAAACTCGATATAAAAACCATGAAGAAGAATTGTAGCCTTTTATGGCCTCCTCTTGGTCTCTTGTCTTTCTCATGCAATGCCCTGAACAACTCCCAGATATTTGAGATGAGCGTAGACACTATTCGATCCAGAATTGGCGAAAATGGTGATCAGGACATGTTCTTTGAGAGTAAACGGCCCTGGATTCAACGAAAACGACCATTTGAGGAAGAACAAGAATCTGCGCAGAGACTGAAGAAACATAAAGCGGATTCTGGCGAAAACCAAAGAATTGGTTTACAAAAGCCAAAAGACAGCAAGATGTTGAAAATGCTGATAAAGTTCCATGGAAGAAGAAGAAGAAAACAGAAATTTTCTCACGAGTTTTTTCGAAGTTGGATTCAAGATTTTCCTCTGAAGTGGGTTTTTAATGCACCTCCCAAAGCAAGCGGTTCAGAATATCAAGGAGGCCACAAAATCTTCCAAGCCCCAACTGCAAAATCTTCTGGTTTTTATATAGTCACATTTGAAAGCTCCTTAAAAAGAGGGCCTTTTTGGCTTAAACTTGAGGATAAGGACAACTATTTTGAACTCGAGAAGATGATGATGGGGCATGGTCGTGTAGACTTTTTAATGCTTCATATCACTACAGATTCTCACCGTTTTGGCTTCCAACCAAGATCCATTTGA

Coding sequence (CDS)

ATGAAGAAGAATTGTAGCCTTTTATGGCCTCCTCTTGGTCTCTTGTCTTTCTCATGCAATGCCCTGAACAACTCCCAGATATTTGAGATGAGCGTAGACACTATTCGATCCAGAATTGGCGAAAATGGTGATCAGGACATGTTCTTTGAGAGTAAACGGCCCTGGATTCAACGAAAACGACCATTTGAGGAAGAACAAGAATCTGCGCAGAGACTGAAGAAACATAAAGCGGATTCTGGCGAAAACCAAAGAATTGGTTTACAAAAGCCAAAAGACAGCAAGATGTTGAAAATGCTGATAAAGTTCCATGGAAGAAGAAGAAGAAAACAGAAATTTTCTCACGAGTTTTTTCGAAGTTGGATTCAAGATTTTCCTCTGAAGTGGGTTTTTAATGCACCTCCCAAAGCAAGCGGTTCAGAATATCAAGGAGGCCACAAAATCTTCCAAGCCCCAACTGCAAAATCTTCTGGTTTTTATATAGTCACATTTGAAAGCTCCTTAAAAAGAGGGCCTTTTTGGCTTAAACTTGAGGATAAGGACAACTATTTTGAACTCGAGAAGATGATGATGGGGCATGGTCGTGTAGACTTTTTAATGCTTCATATCACTACAGATTCTCACCGTTTTGGCTTCCAACCAAGATCCATTTGA

Protein sequence

MKKNCSLLWPPLGLLSFSCNALNNSQIFEMSVDTIRSRIGENGDQDMFFESKRPWIQRKRPFEEEQESAQRLKKHKADSGENQRIGLQKPKDSKMLKMLIKFHGRRRRKQKFSHEFFRSWIQDFPLKWVFNAPPKASGSEYQGGHKIFQAPTAKSSGFYIVTFESSLKRGPFWLKLEDKDNYFELEKMMMGHGRVDFLMLHITTDSHRFGFQPRSI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G23075.1Clc09G23075.1mRNA