Clc09G19250 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G19250
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Phytocyanin domain-containing protein
Location	ClcChr09: 32537075 .. 32539115 (-)
RNA-Seq Expression	Clc09G19250
Synteny	Clc09G19250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTCTTCAATTTGAATTTTTGCTCATTGCTCATAATATAAAAACCCCATCAACTCAAACATTTCCAACATCAAGAATTCACTCTCACAAAACTTAATAAGCTTTGTGTTTCTTTATGAATTGAAAAGTTTCATAATATCCAACCATGGCCTTCATATGTTCAAAACTAATCATTCTCTTCATTTGGACATGCATCTCAACTCTAACCTCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCGCCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACCCCACCATTACCACGGTTTCCACCGGCACCATCACAACATCCTCGAACACCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCACCGTCACCACCACCATCAAGACATCCTCGAACACCACCATCACCACGGTTTTCGCCACCGCTACCACTACCACCACGACATCCTCGAACACCACCATCACCACGTTTTTCGCCACCACCACCACGACGTCCTCGAACACCACCATCACAACGACTGTCGCCACCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTTGCCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCATCGCCATCGTTGCCGTCACCGTCACCATCACCATCATTGCCACCATCACCACTGCCGACTCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCTAACCAATGGCAGCTTGGCTTCAATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATGTAAACGATATTCTAGGTAATCCTCTTTAAGCTCATTTCCATGGTTAGTATGAGAAAATTTCAATCCCAAACTTATTTTGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGTGTTCAAATATGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTACCAAACATGAGAAGTTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATGAAGTTCACCCTCTCACCAATAGTTCGGAGTTAATTATTTTACGATATTTTCTTGAAAAAACAATATTTAGATACATCTCATGATACATCCATCTTTATGCATTTCACTCTAATCATACACGAAAAAATAATAAAAAAATATATTAAGAAAAAGTAAAAAAAATTTATCACGTGGAAAACTATATAATTACCCATTGAGTGAGATGCACAAAGAGAATGTTGCCTAGAATGCACCTAAATATTTTTCTTCTTGAAATGCACTCCTTAGAATACATTTTTATTCAAGCCTTTACAACAATATAGTGTTTATGAACTAATAATTAGTTAATACGTTTAAATAAGATATCCCAATGGGAGAAAATGATGACCAAGCCAGTTATATTTTTGTTTGATGTGATTTAGTCTTTTTGGTTCAACTTTTGAAGTAGAAGTAGGGAAACAAGCCTATGTAGTTTTAGTTGAGAGCATATGCCTAAACTAGTGGAACAATATCATTTAGCTCTATTGTTACTTCTAATAAATTTATTTTGTGTAATATTTTTCTTATCTTTTTTTAGTATATACACTATGCAACTATATATCTTAATAAATATCAAAATGAATAAGAGTGTCATACGTCATTGAAAGAGAAAAAAGAAAAGAAAAAGAAACTATTATATCAAGAAAGAGTAAGTCACATGTTAATTAATGACAACTTTGATCCAATTATATTAAATAATCTAAATCAACAATCGATGATATGACTGAATCAATAAAAGAAATAAATGTT

mRNA sequence

CAACTCTTCAATTTGAATTTTTGCTCATTGCTCATAATATAAAAACCCCATCAACTCAAACATTTCCAACATCAAGAATTCACTCTCACAAAACTTAATAAGCTTTGTGTTTCTTTATGAATTGAAAAGTTTCATAATATCCAACCATGGCCTTCATATGTTCAAAACTAATCATTCTCTTCATTTGGACATGCATCTCAACTCTAACCTCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCGCCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACCCCACCATTACCACGGTTTCCACCGGCACCATCACAACATCCTCGAACACCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCACCGTCACCACCACCATCAAGACATCCTCGAACACCACCATCACCACGGTTTTCGCCACCGCTACCACTACCACCACGACATCCTCGAACACCACCATCACCACGTTTTTCGCCACCACCACCACGACGTCCTCGAACACCACCATCACAACGACTGTCGCCACCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTTGCCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCATCGCCATCGTTGCCGTCACCGTCACCATCACCATCATTGCCACCATCACCACTGCCGACTCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCTAACCAATGGCAGCTTGGCTTCAATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATGTAAACGATATTCTAGTGTTCAAATATGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTACCAAACATGAGAAGTTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATGAAGTTCACCCTCTCACCAATAGTTCGGAGTTAATTATTTTACGATATTTTCTTGAAAAAACAATATTTAGATACATCTCATGATACATCCATCTTTATGCATTTCACTCTAATCATACACGAAAAAATAATAAAAAAATATATTAAGAAAAAGTAAAAAAAATTTATCACGTGGAAAACTATATAATTACCCATTGAGTGAGATGCACAAAGAGAATGTTGCCTAGAATGCACCTAAATATTTTTCTTCTTGAAATGCACTCCTTAGAATACATTTTTATTCAAGCCTTTACAACAATATAGTGTTTATGAACTAATAATTAGTTAATACGTTTAAATAAGATATCCCAATGGGAGAAAATGATGACCAAGCCAGTTATATTTTTGTTTGATGTGATTTAGTCTTTTTGGTTCAACTTTTGAAGTAGAAGTAGGGAAACAAGCCTATGTAGTTTTAGTTGAGAGCATATGCCTAAACTAGTGGAACAATATCATTTAGCTCTATTGTTACTTCTAATAAATTTATTTTGTGTAATATTTTTCTTATCTTTTTTTAGTATATACACTATGCAACTATATATCTTAATAAATATCAAAATGAATAAGAGTGTCATACGTCATTGAAAGAGAAAAAAGAAAAGAAAAAGAAACTATTATATCAAGAAAGAGTAAGTCACATGTTAATTAATGACAACTTTGATCCAATTATATTAAATAATCTAAATCAACAATCGATGATATGACTGAATCAATAAAAGAAATAAATGTT

Coding sequence (CDS)

ATGGCCTTCATATGTTCAAAACTAATCATTCTCTTCATTTGGACATGCATCTCAACTCTAACCTCCGCTAATGAGGGTTGGTTTTGGGGACATAATTGTACTTTGCCTTTCAAACCTAGGCACAAGTCTCCTCCACCGCCATCACGGCGGCTCCCACCCTCACCACCACCATTACGACGTCCTCGAACCCCACCATTACCACGGTTTCCACCGGCACCATCACAACATCCTCGAACACCACCATCACGACATCCTCGAACTCCACCATCACGACGGTTTCCACCGTCACCACCACCATCAAGACATCCTCGAACACCACCATCACCACGGTTTTCGCCACCGCTACCACTACCACCACGACATCCTCGAACACCACCATCACCACGTTTTTCGCCACCACCACCACGACGTCCTCGAACACCACCATCACAACGACTGTCGCCACCGCCACCACCACCACTAGTGCTATCATCGCCTCCACCACCATCAAGAAGGCCTCGAACACCACCACCACAAAAGTTGCCACCACTTCCACCACCATCACCGATGGTGTCACCACCACCACCACGATCACGACGGCCACGAACACCACCATCTCAACAAATACCACCACCACCACCATCGCCATCGTTGCCGTCACCGTCACCATCACCATCATTGCCACCATCACCACTGCCGACTCCACAAAGTCCAAGAAAGATCATAGTGGGTGGTTCTAACCAATGGCAGCTTGGCTTCAATTATAATGATTGGGCACTCAAAAATGGTCCCTTTTATGTAAACGATATTCTAGTGTTCAAATATGATCCTCCAAACACTTCAACTCCTCCTCATAGTGTTTATCAGCTACCAAACATGAGAAGTTTTGCCAATTGTGATTTGGGAAAGGGCAAAATGGTAGCAAATTTAACACAAGGAAGTGGAGATGGTTTTGAGTTTGTGCTCAAAGACCAAAATCCTTACTACTTTGCTTGTGGAGAAGGCAATGGCTTCCATTGCAAAATTGGATCCATGAAGTTCACCCTCTCACCAATAGTTCGGAGTTAA

Protein sequence

MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKSPPPPSRRLPPSPPPLRRPRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRHPRTPPSPRFSPPLPLPPRHPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPPPPSPSLPSPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVRS

Homology

[Close]

BLAST of Clc09G19250 vs. NCBI nr
Match: XP_038902031.1 (extensin-3-like [Benincasa hispida])

HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-115
Identity = 265/356 (74.44%), Postives = 280/356 (78.65%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKSPPPPSRRLPPSPPPLRR 60
           MAFI SK+IILFIW C STL+SAN G F G+N TL     ++SPPPP RR PPSPPP RR
Sbjct: 1   MAFIYSKVIILFIWACFSTLSSANVGRFRGYNSTL-----NRSPPPPLRRFPPSPPPSRR 60

Query: 61  PRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRHPRTPPSPRFSPPLPLPPR 120
           P TPP  RFPP        PPS HPRTPPSR+FPP PPPSR PRTPPS      LP PPR
Sbjct: 61  PPTPPSRRFPP--------PPSHHPRTPPSRQFPP-PPPSRRPRTPPSQW----LPPPPR 120

Query: 121 HPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPPLP-- 180
           HPRTPPS       PR PRT           PPLVLSSPPPPSRR RTPP Q  PP P  
Sbjct: 121 HPRTPPS-------PRHPRT-----------PPLVLSSPPPPSRRCRTPPQQSPPPSPPS 180

Query: 181 -----PPSPMVSPPPPRSRRPRTPPSQQIPPPPPSPSLPSPSPSPSLP--PSPLPTPQSP 240
                PPSPM+S PPP+SRRPRTPPSQ+IPPPP  PS+PSPSP PSLP  PSPLP PQSP
Sbjct: 181 QQPQTPPSPMMS-PPPQSRRPRTPPSQKIPPPP--PSVPSPSPLPSLPPSPSPLPIPQSP 240

Query: 241 RKIIVGGSNQWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFAN 300
           RKIIVGGS QWQLGF+YNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFAN
Sbjct: 241 RKIIVGGSKQWQLGFDYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFAN 300

Query: 301 CDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVR 348
           CDLGKGKMVAN+TQGS DGFEFVLKDQNPYYFACGEGNGFHCK+GSMKFTL+PIV+
Sbjct: 301 CDLGKGKMVANITQGSRDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLTPIVK 317

[Close]

BLAST of Clc09G19250 vs. NCBI nr
Match: XP_011649199.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypothetical protein Csa_006192 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 1.1e-96
Identity = 235/356 (66.01%), Postives = 250/356 (70.22%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANE-GWFWGH-NCTLPFKPRHKSPPPPSRRLPPSPPPL 60
           MAFI SKLIILFIW CISTL SAN  GWFWG  NCT+   P HK         P  PPPL
Sbjct: 1   MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHK---------PSLPPPL 60

Query: 61  RRPRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRHPRTPPSPR--FSPPLP 120
           R                  R PPSR+PRTPPSRRFP  PPPSR  RTPPS R    PP P
Sbjct: 61  R------------------RLPPSRYPRTPPSRRFP--PPPSRRLRTPPSQRCPLLPPPP 120

Query: 121 LPPRHPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPP 180
            PPRHPRT       PPP RRPRT        PPPPP +LSSP                 
Sbjct: 121 PPPRHPRT-------PPPSRRPRT--------PPPPPPMLSSP----------------- 180

Query: 181 LPPPSPMVSPPPPRSR---RPRTPPSQQIPPPPPS-PSLPSPSPSPSLPPSPLPTPQSPR 240
            PPPSP+VSPPPP+ R   RPR PP Q IPP PPS PS   PSPSPSLPPSP PTPQSPR
Sbjct: 181 -PPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSPPSLPSPSPPSPSPSLPPSPQPTPQSPR 240

Query: 241 KIIVGGSNQWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFANC 300
           KIIVGGSNQWQLGF+Y DWALKNGPFYVNDILVFKYDPPN STPPH+VY LPNMRS ANC
Sbjct: 241 KIIVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYLLPNMRSLANC 294

Query: 301 DLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVRS 349
           D GK K++AN+TQGSGDGFEFVLKDQNPYYFACGEGNGFHCK+GSMKFTL+PI+++
Sbjct: 301 DFGKAKVLANITQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLTPILKA 294

[Close]

BLAST of Clc09G19250 vs. NCBI nr
Match: XP_022944052.1 (alpha carbonic anhydrase 8-like [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-71
Identity = 184/348 (52.87%), Postives = 207/348 (59.48%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKSPPPPSRRLPPSPPPLRR 60
           M  I SKL+ILFIW C+STL+SAN+ WFW HNC+ PF P H           PSPPP   
Sbjct: 1   MPSISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPTHH----------PSPPP--- 60

Query: 61  PRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRHPRTPPSPRFSPPLPLPPR 120
                           P +P S   RTPPS+  PPSPP SR PRTPPS +    +P PP 
Sbjct: 61  ----------------PTSPTS---RTPPSQSLPPSPPRSRRPRTPPSQQ----MPSPP- 120

Query: 121 HPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPPLPPP 180
               PPSP+  PPP                        PPP S+RPRT            
Sbjct: 121 ----PPSPQLPPPP------------------------PPPRSQRPRT------------ 180

Query: 181 SPMVSPPPPRSRRPRTPPSQQIPPPPPSPSLPSPSPSPSLPPSPLPTPQSPRKIIVGGSN 240
                  PPRSR PRTPPSQQ  PPPP P+ PS                  RKIIVGGS 
Sbjct: 181 -------PPRSRGPRTPPSQQSSPPPPPPTPPS------------------RKIIVGGSE 240

Query: 241 QWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKGKMV 300
            W LGF+YNDWALKNGPF++NDILVFKYDPPN++TP HSVYQLPNMRSF NCDLGK KM+
Sbjct: 241 HWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDLGKAKML 246

Query: 301 ANLTQGSGD-GFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVR 348
           AN TQGS + GFEF LK QNPYYFACGE NGFHC+ GSMKFTL+PI++
Sbjct: 301 ANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPILQ 246

[Close]

BLAST of Clc09G19250 vs. NCBI nr
Match: XP_008459215.1 (PREDICTED: extensin, partial [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-70
Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 195 RTPPSQQIPPPPPS-PSLPSPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFNYNDWAL 254
           RTPP Q+IPPPPPS PS   PSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGF+Y DWAL
Sbjct: 1   RTPPPQRIPPPPPSLPSPLPPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFDYTDWAL 60

Query: 255 KNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKGKMVANLTQGSGDGFEF 314
           KNGPFYVNDILVFKYDPPN STPPHSVY LPNMRSFANCDLGK KM+AN+ QGSGDGFEF
Sbjct: 61  KNGPFYVNDILVFKYDPPNMSTPPHSVYLLPNMRSFANCDLGKAKMLANIKQGSGDGFEF 120

Query: 315 VLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVR 348
           VLKDQNPYYFACGEGNGFHCK+GSMKFT++PI++
Sbjct: 121 VLKDQNPYYFACGEGNGFHCKLGSMKFTITPILK 154

[Close]

BLAST of Clc09G19250 vs. NCBI nr
Match: XP_023533130.1 (extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.9 bits (707), Expect = 2.3e-70
Identity = 197/326 (60.43%), Postives = 222/326 (68.10%), Query Frame = 0


Query: 46  PPSRRLPPSPPPLRRPRTPPLPRFPPAPSQHPRTPPSRH-------PRTPPSRRFPP--S 105
           P SRRLP  PPP  RPR PP PR  P PS+ PR PP RH       PR PP R  PP   
Sbjct: 234 PQSRRLPSPPPPSTRPRIPP-PRQVPPPSKRPRIPPPRHVPPPSKRPRIPPPRHVPPPSP 293

Query: 106 PPPSRHPRTPPSPRFSPPLPLPP-RHPRTPP----SPRFSPPPPRRPRTPPSQRLSPPPP 165
           PPPS+ PR PP  +  PP P PP + PR PP     P   PPP +RPR PP +++ PP  
Sbjct: 294 PPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRQVPPP-- 353

Query: 166 PPLVLSSPPPPSRRPRTPPPQKLPPLPPPSPMVSP--PPPRSRRPRTPP----SQQIPPP 225
                 SPPPPS+RPR PPP+++PP  PP P   P  PPPR   P +PP      +IPPP
Sbjct: 354 ------SPPPPSKRPRIPPPRQVPPPSPPPPSKQPRIPPPRQVPPPSPPPPSKQPRIPPP 413

Query: 226 ---PPSPSLPSPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFNYNDWALKNGPFYVND 285
              PPSPS PSPSPSPS  PSP P PQ PRKIIVGGS +W+LGF+YNDWALKNGPFY+ND
Sbjct: 414 RQMPPSPSPPSPSPSPS--PSPSPNPQIPRKIIVGGSERWRLGFDYNDWALKNGPFYLND 473

Query: 286 ILVFKYDPPNTSTPPHSVYQLPNMRSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYY 345
           ILVFKYD        HSVY LPNM+S  +CD G  KMVANLTQGSGDGFEFVL  QNPYY
Sbjct: 474 ILVFKYD------RTHSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNHQNPYY 533

Query: 346 FACGEGNGFHCKIGSMKFTLSPIVRS 349
           FACGEGNGFHCK+GSMKF+L+PI ++
Sbjct: 534 FACGEGNGFHCKLGSMKFSLTPIAQA 542

[Close]

BLAST of Clc09G19250 vs. ExPASy TrEMBL
Match: A0A0A0LIT9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 5.3e-97
Identity = 235/356 (66.01%), Postives = 250/356 (70.22%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANE-GWFWGH-NCTLPFKPRHKSPPPPSRRLPPSPPPL 60
           MAFI SKLIILFIW CISTL SAN  GWFWG  NCT+   P HK         P  PPPL
Sbjct: 1   MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHK---------PSLPPPL 60

Query: 61  RRPRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRHPRTPPSPR--FSPPLP 120
           R                  R PPSR+PRTPPSRRFP  PPPSR  RTPPS R    PP P
Sbjct: 61  R------------------RLPPSRYPRTPPSRRFP--PPPSRRLRTPPSQRCPLLPPPP 120

Query: 121 LPPRHPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPP 180
            PPRHPRT       PPP RRPRT        PPPPP +LSSP                 
Sbjct: 121 PPPRHPRT-------PPPSRRPRT--------PPPPPPMLSSP----------------- 180

Query: 181 LPPPSPMVSPPPPRSR---RPRTPPSQQIPPPPPS-PSLPSPSPSPSLPPSPLPTPQSPR 240
            PPPSP+VSPPPP+ R   RPR PP Q IPP PPS PS   PSPSPSLPPSP PTPQSPR
Sbjct: 181 -PPPSPIVSPPPPQRRPRPRPRPPPFQPIPPSPPSLPSPSPPSPSPSLPPSPQPTPQSPR 240

Query: 241 KIIVGGSNQWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNMRSFANC 300
           KIIVGGSNQWQLGF+Y DWALKNGPFYVNDILVFKYDPPN STPPH+VY LPNMRS ANC
Sbjct: 241 KIIVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYLLPNMRSLANC 294

Query: 301 DLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIVRS 349
           D GK K++AN+TQGSGDGFEFVLKDQNPYYFACGEGNGFHCK+GSMKFTL+PI+++
Sbjct: 301 DFGKAKVLANITQGSGDGFEFVLKDQNPYYFACGEGNGFHCKLGSMKFTLTPILKA 294

[Close]

BLAST of Clc09G19250 vs. ExPASy TrEMBL
Match: A0A6J1G5W9 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 223/489 (45.60%), Postives = 257/489 (52.56%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKS---PPPPS--------R 60
           MA I S +I+LF+  C+STL+SA+  WF   N T  F  RHK    PPPPS        R
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  RLPPSPPPL--RRPRTPP-----LPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRH 120
            LPPSPPP   R+PRTPP      PR PP+  + PRTPP R PRTPP R FPP PP  R 
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPPRRPRTPPPRWFPPLPPRPRT 120

Query: 121 PRTPPSP----------------------------------------RFSPP-------- 180
           P + P P                                        ++ PP        
Sbjct: 121 PPSSPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPPHN 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VYLLPNMQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMK 240

Query: 241 ---------LPLPP---RHPRTPPSPRFSPPPPRRPRTPPSQRLSPPPPPPLVLSSPPPP 300
                    LP PP   R PR PP PR  PPP +RPR PP +++ PP  P     SPPPP
Sbjct: 241 FSITPQSRCLPSPPPPSRPPRIPP-PRHVPPPSKRPRIPPPRQVPPPLSP-----SPPPP 300

Query: 301 SRRPRTPPPQKLPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPP--PPSPSL-PSPSPSPS 349
           S+RPR PPP+++PP        S PPP S+RPR PP + +PP   PP PSL PSPSPSPS
Sbjct: 301 SKRPRIPPPRQVPP--------SSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPSPS 360

[Close]

BLAST of Clc09G19250 vs. ExPASy TrEMBL
Match: A0A6J1L0M6 (extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 7.5e-67
Identity = 221/473 (46.72%), Postives = 254/473 (53.70%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKSPP-----------PPSR 60
           MA I S +I+L++  C+STL+SA+ GWF   N T  F  RHK PP           PP R
Sbjct: 1   MASIFSNVIVLYVLACMSTLSSADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWR 60

Query: 61  RLPPSPPPLRRPRTPPLPRFPPAPSQHPRTPPS--RHPRTPPSRRFPPSPPPSRHPRTPP 120
           RLPPSPPP +    P  PR PP+  + PRTPPS  R PRTPP RR PPSPPPSR PRTPP
Sbjct: 61  RLPPSPPPSQ----PRKPRTPPSRPRQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPP 120

Query: 121 SP----------------------------------------RFSPPLPLPPRH------ 180
            P                                        ++  P    P H      
Sbjct: 121 LPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLP 180

Query: 181 --------------------------------------------------------PRTP 240
                                                                     TP
Sbjct: 181 NMQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITP 240

Query: 241 PSPRF-SP-PPPRRPRTPPSQRLSPPPPPPLVLSSPPPPSRRPRTPPPQKLPP------L 300
            S R  SP PP R PR PP     P   PPL    PPPPS+RPR PPP+++PP      +
Sbjct: 241 QSRRLPSPLPPSRPPRIPP-----PRHVPPLF---PPPPSKRPRIPPPRQVPPPSKRPRI 300

Query: 301 PPPSPMVSP-PPPRSRRPRTPPSQQIPPPPPSPSL-PSPSPSPSLPPSPLPTPQSPRKII 349
           PPP  +  P PPP S+RPR PP + +PPP   PSL PSPSPSPS  P P PTPQ PRKII
Sbjct: 301 PPPRQVPPPSPPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSPSPSPPPSPTPQIPRKII 360

[Close]

BLAST of Clc09G19250 vs. ExPASy TrEMBL
Match: A0A6J1KYU0 (extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.9e-66
Identity = 215/453 (47.46%), Postives = 250/453 (55.19%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKSPP-----------PPSR 60
           MA I S +I+L++  C+STL+SA+ GWF   N T  F  RHK PP           PP R
Sbjct: 1   MASIFSNVIVLYVLACMSTLSSADPGWFRARNTTFLFSSRHKRPPFPPPSSRCLPQPPWR 60

Query: 61  RLPPSPPPLRRPRTPPLPRFPPAPSQHPRTPPS--RHPRTPPSRRFPPSPPPSRHPRTPP 120
           RLPPSPPP +    P  PR PP+  + PRTPPS  R PRTPP RR PPSPPPSR PRTPP
Sbjct: 61  RLPPSPPPSQ----PRKPRTPPSRPRQPRTPPSRPRQPRTPPPRRLPPSPPPSRRPRTPP 120

Query: 121 SP----------------------------------------RFSPPLPLPPRHP--RTP 180
            P                                        ++  P    P H     P
Sbjct: 121 LPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYLNDILVFKYDRPNSSTPPHNVYLLP 180

Query: 181 PSPRFSPPPPRRPR--------------------------------------------TP 240
               F+    RR +                                            TP
Sbjct: 181 NMQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITP 240

Query: 241 PSQRLSPPPPP--PLVLSSP---PPPSRRPRTPPPQKLPPLPPPSPMVSPPPPRSRRPRT 300
            S+RL  P PP  P  +  P   PPPS+RPR PPP++   +PPPS     PPP S+RPR 
Sbjct: 241 QSRRLPSPLPPSRPPRIPPPRHVPPPSKRPRIPPPRQ---VPPPS-----PPPPSKRPRI 300

Query: 301 PPSQQIPPPPPSPSL-PSPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFNYNDWALKN 349
           PP + +PPP   PSL PSPSPSPS  P P PTPQ PRKIIVGGS +W+LG +YNDWALKN
Sbjct: 301 PPPRPMPPPLSPPSLPPSPSPSPSPSPPPSPTPQIPRKIIVGGSERWRLGSDYNDWALKN 360

[Close]

BLAST of Clc09G19250 vs. ExPASy TrEMBL
Match: A0A6J1G5Q0 (extensin-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 216/453 (47.68%), Postives = 244/453 (53.86%), Query Frame = 0


Query: 1   MAFICSKLIILFIWTCISTLTSANEGWFWGHNCTLPFKPRHKS---PPPPS--------R 60
           MA I S +I+LF+  C+STL+SA+  WF   N T  F  RHK    PPPPS        R
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  RLPPSPPPL--RRPRTPP-----LPRFPPAPSQHPRTPPSRHPRTPPSRRFPPSPPPSRH 120
            LPPSPPP   R+PRTPP      PR PP+  + PRTPP R PRTPP R FPP PP    
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPPRRPRTPPPRWFPPLPP---R 120

Query: 121 PRTPPSPRFSPPLPLPPRHPR----------------------------------TPPSP 180
           PRTPP    S PLP  P++PR                                      P
Sbjct: 121 PRTPP----SSPLP-TPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPP 180

Query: 181 RFSPPPPRRPRTPPSQRLS----------------------------------------- 240
             S PP      P  Q L+                                         
Sbjct: 181 NSSTPPHNVYLLPNMQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGF 240

Query: 241 ---------PPPPPPLVLSSPPPPSRRPRTPPPQKLPPLPPPSPMVSPPPPRSRRPRTPP 300
                       P    L SPPPPSR PR PPP+ +PP        S PPP S+RPR PP
Sbjct: 241 HCNLGSMKFSITPQSRCLPSPPPPSRPPRIPPPRHVPP--------SSPPPPSKRPRIPP 300

Query: 301 SQQIPPP--PPSPSL-PSPSPSPSLPPSPLPTPQSPRKIIVGGSNQWQLGFNYNDWALKN 349
            + +PP   PP PSL PSPSPSPS  P P PTPQ PRKIIVGGS QW+LGF+YNDWALKN
Sbjct: 301 PRPMPPQPMPPPPSLPPSPSPSPSPSPPPSPTPQIPRKIIVGGSEQWRLGFDYNDWALKN 360

[Close]

BLAST of Clc09G19250 vs. TAIR 10
Match: AT2G15780.1 (Cupredoxin superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 71/120 (59.17%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 227 TPQSPRKIIVGGSNQWQLGFNYNDWALKNGPFYVNDILVFKYDPPNTSTPPHSVYQLPNM 286
           T   PRKIIVGG  +W  GFNY DWA K  PF++NDILVFKY+PP   T  HSVY LPN 
Sbjct: 137 TYNGPRKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPPAPFT--HSVYLLPNP 196

Query: 287 RSFANCDLGKGKMVANLTQGSGDGFEFVLKDQNPYYFACGEGNGFHCKIGSMKFTLSPIV 346
            S+  CD+ KGKM+A+  QG+G GFEFVLK   PYY +CGE +G HC  G+MKFT+ P++
Sbjct: 197 SSYEKCDVKKGKMIASPKQGAGKGFEFVLKQMKPYYISCGEHDGAHCSNGTMKFTVMPML 254

[Close]

BLAST of Clc09G19250 vs. TAIR 10
Match: AT4G22505.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.6e-06
Identity = 108/227 (47.58%), Postives = 125/227 (55.07%), Query Frame = 0


Query: 36  PFKPRHKSPPPPSRRLPPSPPPLRRPRTPPLP------RFPPAPSQHPRTPPSRHPRTPP 95
           P  PR  SPPPP     P PPP R PRTPP P        PP P + PRTPP+  PRTPP
Sbjct: 38  PRTPRTPSPPPPRTPKTPPPPPPRTPRTPPPPPPRTPRTPPPPPPRTPRTPPTAPPRTPP 97

Query: 96  -SRR----FPPSPPPSRHPRTPP-----SPRFSPPLPLPPRHPRTPPSPRFSPPPPRRPR 155
            S R     PP  PP+  P+TPP     SP  SPP   P   PRTPP+     PP   PR
Sbjct: 98  VSPRIPPILPPKTPPTAPPQTPPVSPPKSPPNSPPRAPPLSPPRTPPTSPPRVPPLSPPR 157

Query: 156 TPPSQ--RLSPPPPPPLVLSSPP--PPSRRPRTPP--PQKLPPLPPP-SPMVSPP--PPR 215
           TPP+   R  P PPP    +SPP  PP   PRTPP  P + PP+PPP +P  SPP  PP 
Sbjct: 158 TPPTSPPRAPPIPPPRTPSTSPPRAPPLSPPRTPPTSPPRAPPVPPPNTPPTSPPRAPPL 217

Query: 216 SRRPRTPPSQ--QIPP--PPPSPSLPSPSPSPSLPP--SPLPTPQSP 232
           S  PRTPP+   + PP  PP +P +P P  SP+ PP   PL  P++P
Sbjct: 218 S-PPRTPPNSPPRTPPTSPPRAPPVPPPRISPTAPPRAPPLSPPRTP 263

[Close]

BLAST of Clc09G19250 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 90/200 (45.00%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 36  PFKPRHKSPPPPSRRLPPSPPPLRRPRTPPLPRFPPAPSQHPRTPPSRHPRTPPSRRFPP 95
           P  P +  PPPP    PP PPP+  P  PP P  PP P   P  PPS  P  PP    PP
Sbjct: 444 PPPPVYSPPPPPP---PPPPPPVYSPPPPPPPPPPPPPVYSP-PPPSPPPPPPPVYSPPP 503

Query: 96  SPPPSRHPRTPPSPRFSPPLPLPPRHPRTPPSPRFSP-----PPPRRPRTPPSQRLSPPP 155
            PPP      PP P +SPP P     P  PPSP  +P     PPP  P +PP  + SPPP
Sbjct: 504 PPPP-----PPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP 563

Query: 156 PPPLVLSSPPPP--SRRPRTPPPQKLPPLPPPSPMVSPPPPRSRRPRTPPSQQIPPPPPS 215
           P P   SSPPPP  S  P +PPP   PP PP  P +SPPPP +     PP+    PPPP 
Sbjct: 564 PEPYYYSSPPPPHSSPPPHSPPPPHSPP-PPIYPYLSPPPPPTPVSSPPPTPVYSPPPPP 623

Query: 216 PSLPSPSPSPSLPPSPLPTP 229
           P +  P P P +  SP P P
Sbjct: 624 PCIEPPPPPPCIEYSPPPPP 633

The following BLAST results are available for this feature:

BLAST of Clc09G19250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902031.1	2.4e-115	74.44	extensin-3-like [Benincasa hispida]	[more]
XP_011649199.1	1.1e-96	66.01	leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypoth...	[more]
XP_022944052.1	1.2e-71	52.87	alpha carbonic anhydrase 8-like [Cucurbita moschata]	[more]
XP_008459215.1	1.4e-70	87.66	PREDICTED: extensin, partial [Cucumis melo]	[more]
XP_023533130.1	2.3e-70	60.43	extensin-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc09G19250 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G19250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIT9	5.3e-97	66.01	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585...	[more]
A0A6J1G5W9	1.0e-68	45.60	extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]
A0A6J1L0M6	7.5e-67	46.72	extensin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1	[more]
A0A6J1KYU0	2.9e-66	47.46	extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1	[more]
A0A6J1G5Q0	1.3e-63	47.68	extensin-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]

BLAST of Clc09G19250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15780.1	1.5e-38	59.17	Cupredoxin superfamily protein	[more]
AT4G22505.1	9.6e-06	47.58	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G13340.1	1.1e-04	45.00	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 243..336 e-value: 1.1E-5 score: 25.4
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 232..346 score: 21.778307
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 231..344 e-value: 2.4E-21 score: 78.0
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 233..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..234
None	No IPR available	PANTHER	PTHR34052:SF1	GLYCINE-RICH PROTEIN-LIKE	coord: 2..347
None	No IPR available	PANTHER	PTHR34052	GLYCINE-RICH PROTEIN-LIKE	coord: 2..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G19250.1	Clc09G19250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0009055	electron transfer activity