Clc09G11780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G11780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Hybrid signal transduction protein dokA isoform X2
Location	ClcChr09: 10485870 .. 10488197 (-)
RNA-Seq Expression	Clc09G11780
Synteny	Clc09G11780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTGAAATGACGGCGTCGTTTTAGTACGGCGGTTGTCTTCGAGTTCAATCTCCGAGTTGAAAGCTTCACCGACTCAGCGACTGTGGCGTACGGCGCTGAAGATCGTGGCCAAAAATTCTTTGAGGCTTCAACTTCAATGGAGGGAATCGGATCCAGGTTGGGCCGAGCCTCGTCCCGGTACGGTCCGGCGGCCACCGTCTTCAACGGACCCGTCCGGAAATGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTTACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCGATTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCACCGCGCCGCCCGACGAGCCCCCCAAACGGAAGTTCCGTTACACTCCTGTAAGTTCAAAGCTCTATCTGAATCCATTTTGCATGTCCAATTGATGCTCTATGTATGGTGAGTGAGCGATTGCGGTTGCGTTTGTTTCATGTGAATTGGGAGTGTTCCCGATTTCTTAAGTGAGGGGCTTGCGAAGTTCTCCGTCAATCTCGTCTGTCGTTGGGGGATGTAATTCTTGGTATTGATTTGTATTAGTGTTTTTTAGTATCTGCTTACTGATTTTAGCATGCTCTGCCTTTTGGGAACAATTTAAGAAAGGGTGTTGTTTCGCTTGGTTCGCGTCTTGATTATGAGTATAGGTCATCTTGTATTCTGTTCTTATTGTTGCCTGTTCCTCTTGATTAGTATTTAACTGCAACCAAGCAATTTGATTGCTTTGGTTGTGATGTGCAGATTGCTGTGCTGGAGAAGCACAAAAATGCAGAATTGATAAGTGTTAAAGATGAAGTTAGAGTAAAAGAAATGGACCAGTCGGCGGCAAAGACGGATACTGTGGGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGTGACTGACTGATTTCAACTTGGTTTGTTTAACTTGTGAAGTTTCTTTGTTACGCTAAATTGAGTATAGCTCAATAATTTAGGCATGTCCTCGGAACTGGTTCAAAACACCCATTCACATGTTGGTTGAACTAAAAAAAGGGGAAAAAATGATTTCTAATTGTCTTTGGCTGAATTGAATCATTCATATCAGATTTCAAAGTCTGCCTTATGATACATGTTAATTGAGATAGTTACATGCTTATGTTGTATATAATCATTAGCTAACAAATAAAATCTGAAACTGGTGTGGTTTTGGTCAACATGAGCATAATTCAAAGGTACTTAACATGTACTCCTTTTGGATTCAAGGTTGAAATCTCCATTCAAGGGCCAACTACTTGAAAGATTACAGGAGAGATGAACTTTTCATCATATAACAGGATTTCTCTGTACAGTTCTGGTTTTAGGGAACCCTGTGCAGTGAGCAGTGAGCATGTTAGGATACTTCTTAACTAGAATAAGATCTAAAATATATTTAGATGCAACGACGAAACTACAGGATTACCCAATTATAAAGACACTTGGAACCTCCAATCTTGAGTATGCTAACCCAAGCACTAGACCACTCAACAATTGCCCCCATTCCCTCAATCCCACTCCCTCTATTTATAACAAAATAGACTAAACTCTGATTACCTTAATATCATATCTCTAACTAAGTACCTTACAGAGCACTAAAGAAGACTTAAAGCTCTCTTTGCCAATTCACATACTCATGAACTGTGGCATAGGCATAGCTTACAAGGTTAACTTAATCACAGATAAATTAGCTAGATCAGTACAAAATGGTAGAATCTTCTCAAGAACTTGATGAAACTGAACCATTCTCTTTGCAGGAAACAAGCAAGATTCTGAACAGCCCACGCGGTGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAAATCCAAGATTCTGCTGGTAAGAGCTCTTAAAATTTGCAAACAGGACAGAGCTGAAGCCGGTTTAAACCCTATGGACAATGGTATAGCAGAAATTTAGTCTCTTATGTGAATTTGTATCTCATCCAATGGTAATTTGGAAGCATAATATAATATAGCGTCTGTTTGTATATGATCTTAGGGTTAGTGGGGGATGGATCAGTATATAATCTAGAAGAATCTTGTGGGAATTTGTTTGTTGTGGAAAATGTATTTATTCTTCCTGAATAATGTGCAATCAGAATGCTGTAGGAAAAACCAGCTCTTGTGAAGGAATTATGTTCATGAAAATGTTCATATAAATGTTGATAGTGATCAAAACTGAAGTGCTAGAGGCCTTTGTGGACTTTGATGACTAGGA

mRNA sequence

AAGTTGAAATGACGGCGTCGTTTTAGTACGGCGGTTGTCTTCGAGTTCAATCTCCGAGTTGAAAGCTTCACCGACTCAGCGACTGTGGCGTACGGCGCTGAAGATCGTGGCCAAAAATTCTTTGAGGCTTCAACTTCAATGGAGGGAATCGGATCCAGGTTGGGCCGAGCCTCGTCCCGGTACGGTCCGGCGGCCACCGTCTTCAACGGACCCGTCCGGAAATGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTTACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCGATTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCACCGCGCCGCCCGACGAGCCCCCCAAACGGAAGTTCCGTTACACTCCTTATTTAACTGCAACCAAGCAATTTGATTGCTTTGGTTGTGATGTGCAGATTGCTGTGCTGGAGAAGCACAAAAATGCAGAATTGATAAGTGTTAAAGATGAAGTTAGAGTAAAAGAAATGGACCAGTCGGCGGCAAAGACGGATACTGTGGGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGAAACAAGCAAGATTCTGAACAGCCCACGCGGTGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAAATCCAAGATTCTGCTGGTAAGAGCTCTTAAAATTTGCAAACAGGACAGAGCTGAAGCCGGTTTAAACCCTATGGACAATGGTATAGCAGAAATTTAGTCTCTTATGTGAATTTGTATCTCATCCAATGGTAATTTGGAAGCATAATATAATATAGCGTCTGTTTGTATATGATCTTAGGGTTAGTGGGGGATGGATCAGTATATAATCTAGAAGAATCTTGTGGGAATTTGTTTGTTGTGGAAAATGTATTTATTCTTCCTGAATAATGTGCAATCAGAATGCTGTAGGAAAAACCAGCTCTTGTGAAGGAATTATGTTCATGAAAATGTTCATATAAATGTTGATAGTGATCAAAACTGAAGTGCTAGAGGCCTTTGTGGACTTTGATGACTAGGA

Coding sequence (CDS)

ATGGAGGGAATCGGATCCAGGTTGGGCCGAGCCTCGTCCCGGTACGGTCCGGCGGCCACCGTCTTCAACGGACCCGTCCGGAAATGGAAGAAGAAGTGGGTGTTGGCCTCTTCCTCTTCCTCCGGCCTTACTTACCAGCCCTCTTCTCAGTCCCAATCCAACGCTCAGAAGCTTCTTCTCTGCCGCTGGACTCCGATTCATCCGCCTACTTCATCGGAAGCTGACGGAGCCACCGCGCCGCCCGACGAGCCCCCCAAACGGAAGTTCCGTTACACTCCTTATTTAACTGCAACCAAGCAATTTGATTGCTTTGGTTGTGATGTGCAGATTGCTGTGCTGGAGAAGCACAAAAATGCAGAATTGATAAGTGTTAAAGATGAAGTTAGAGTAAAAGAAATGGACCAGTCGGCGGCAAAGACGGATACTGTGGGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGGTTTTTAAGGAAGAAACTCAGGAAACAAGCAAGATTCTGAACAGCCCACGCGGTGGAAGCAGGAACAACTTAGATTTGGCTTTGTGCTTGAATGGTCAGAAACAAATCCAAGATTCTGCTGGTAAGAGCTCTTAA

Protein sequence

MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLLCRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAELISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLDLALCLNGQKQIQDSAGKSS

Homology

[Close]

BLAST of Clc09G11780 vs. NCBI nr
Match: XP_038898202.1 (uncharacterized protein LOC120085942 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.2e-85
Identity = 172/199 (86.43%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTY PSSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYHPSSQSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHPPTSSEADG TAPPDEPPKRKFRYTP                IAVLE+ KNAE
Sbjct: 61  CRWTPIHPPTSSEADGTTAPPDEPPKRKFRYTP----------------IAVLEEQKNAE 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L S+KDEVRVKEMDQ AAKT TVGNEAQGELNVNEVFKEETQETSKILNSP  GSRNNLD
Sbjct: 121 LRSIKDEVRVKEMDQLAAKTATVGNEAQGELNVNEVFKEETQETSKILNSPSDGSRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNG+KQIQDSAGKSS
Sbjct: 181 LALCLNGRKQIQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. NCBI nr
Match: XP_004151087.1 (uncharacterized protein LOC101212909 [Cucumis sativus] >KGN44051.1 hypothetical protein Csa_015436 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80
Identity = 164/198 (82.83%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHPPTSSEAD ATAPPDEPPKRKFRYTP                IAVLE+ K+AE
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVR+KEMDQ AAKT TVGNEA GELNVNE+FKEETQETSK LNSPR GSRNNLD
Sbjct: 121 LRSVKDEVRMKEMDQLAAKTATVGNEALGELNVNEIFKEETQETSKNLNSPRDGSRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKS 199
           LALCLNGQK++QDSAGKS
Sbjct: 181 LALCLNGQKKVQDSAGKS 182

[Close]

BLAST of Clc09G11780 vs. NCBI nr
Match: XP_022936275.1 (uncharacterized protein LOC111442943 [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 4.1e-80
Identity = 164/199 (82.41%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHP TSSEADGA APP+EPP+RKFRYTP                IAVLE+ KNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVRVKEMDQSA+KT TVGNEAQGELNVNEVFKEETQETSKILNSPR G+RNNLD
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNGQ   QDSAGKSS
Sbjct: 181 LALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. NCBI nr
Match: XP_023536003.1 (uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 5.9e-79
Identity = 161/199 (80.90%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHP TSSEADG  APP+EPP+RKFRYTP                IAVLE+ KNA 
Sbjct: 61  CRWTPIHPSTSSEADGTAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVRVKEMDQSA+KT TVGN+AQG+LNVNEVFKEETQETSKILNSPR G+RNNLD
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNDAQGDLNVNEVFKEETQETSKILNSPRDGNRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNGQ   QDSAGKSS
Sbjct: 181 LALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. NCBI nr
Match: KAG6592060.1 (hypothetical protein SDJN03_14406, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024937.1 hypothetical protein SDJN02_13757, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 7.7e-79
Identity = 162/199 (81.41%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSN+QKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNSQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHP TSSEADGA A P+EPP+RKFRYTP                IAVLE+ KNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAAPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVRVKEMDQSA+KT TVGNEAQGELNVNEVFKEETQETSKILNSPR G+RNNLD
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNGQ   QDSAGKSS
Sbjct: 181 LALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. ExPASy TrEMBL
Match: A0A0A0K8E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 164/198 (82.83%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHPPTSSEAD ATAPPDEPPKRKFRYTP                IAVLE+ K+AE
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVR+KEMDQ AAKT TVGNEA GELNVNE+FKEETQETSK LNSPR GSRNNLD
Sbjct: 121 LRSVKDEVRMKEMDQLAAKTATVGNEALGELNVNEIFKEETQETSKNLNSPRDGSRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKS 199
           LALCLNGQK++QDSAGKS
Sbjct: 181 LALCLNGQKKVQDSAGKS 182

[Close]

BLAST of Clc09G11780 vs. ExPASy TrEMBL
Match: A0A6J1FD66 (uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC111442943 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.0e-80
Identity = 164/199 (82.41%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNAQKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHP TSSEADGA APP+EPP+RKFRYTP                IAVLE+ KNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVRVKEMDQSA+KT TVGNEAQGELNVNEVFKEETQETSKILNSPR G+RNNLD
Sbjct: 121 LRSVKDEVRVKEMDQSASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNGQ   QDSAGKSS
Sbjct: 181 LALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. ExPASy TrEMBL
Match: A0A6J1ILX5 (uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 161/199 (80.90%), Postives = 167/199 (83.92%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG+ YQ SSQSQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHP TSSEADGA APP+EPP+RKFRYTP                IAVLE+ KNA 
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTP----------------IAVLEEQKNAG 120

Query: 121 LISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNLD 180
           L SVKDEVRVKE DQSA+K  TVGNEAQGELNVNEVFKEETQETSKILNSPR G RNNLD
Sbjct: 121 LRSVKDEVRVKETDQSASKMATVGNEAQGELNVNEVFKEETQETSKILNSPRDGDRNNLD 180

Query: 181 LALCLNGQKQIQDSAGKSS 200
           LALCLNGQ   QDSAGKSS
Sbjct: 181 LALCLNGQNPKQDSAGKSS 183

[Close]

BLAST of Clc09G11780 vs. ExPASy TrEMBL
Match: A0A5D3DHK3 (Hybrid signal transduction protein dokA isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00190 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77
Identity = 161/200 (80.50%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHPPTSSEAD  + PPDEPPKRKFRYTP                IAVLE+ K+AE
Sbjct: 61  CRWTPIHPPTSSEADETSPPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LISVKDEVRVKEMDQSAAKT-DTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNL 180
           + SVKDEVR+KEMDQ AAKT   VGNEA GELNVNEVFKEETQETSK LNSPR GSRNNL
Sbjct: 121 MRSVKDEVRMKEMDQLAAKTAAAVGNEALGELNVNEVFKEETQETSKNLNSPRDGSRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 200
           DLALCLNGQK++QDSAGKSS
Sbjct: 181 DLALCLNGQKKVQDSAGKSS 184

[Close]

BLAST of Clc09G11780 vs. ExPASy TrEMBL
Match: A0A1S3BHG2 (uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.5e-77
Identity = 161/200 (80.50%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL YQ SS SQSNAQKLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIHPPTSSEADGATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIAVLEKHKNAE 120
           CRWTPIHPPTSSEAD  + PPDEPPKRKFRYTP                IAVLE+ K+AE
Sbjct: 61  CRWTPIHPPTSSEADETSPPPDEPPKRKFRYTP----------------IAVLEEQKSAE 120

Query: 121 LISVKDEVRVKEMDQSAAKT-DTVGNEAQGELNVNEVFKEETQETSKILNSPRGGSRNNL 180
             SVKDEVR+KEMDQ AAKT   VGNEA GELNVNEVFKEETQETSK LNSPR GSRNNL
Sbjct: 121 TRSVKDEVRMKEMDQLAAKTAAAVGNEALGELNVNEVFKEETQETSKNLNSPRDGSRNNL 180

Query: 181 DLALCLNGQKQIQDSAGKSS 200
           DLALCLNGQK++QDSAGKSS
Sbjct: 181 DLALCLNGQKKVQDSAGKSS 184

[Close]

BLAST of Clc09G11780 vs. TAIR 10
Match: AT5G55210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 62/172 (36.05%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRY-GPAAT-VFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQSNAQK- 60
           MEG+GSRL R SSRY GPAAT VF+G VRKWKKKWV  S+SS G+     S  ++N+   
Sbjct: 1   MEGVGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNGRNNSNNS 60

Query: 61  -----LLLCRWTPIHPPTSSEAD-GATAPPDEPPKRKFRYTPYLTATKQFDCFGCDVQIA 120
                LLL +WTP+   T + +D   +   +E PKR+FRY P      +      D +I 
Sbjct: 61  NSPHHLLLHKWTPLTSATVTASDANGSGETEESPKRRFRYAPIAMLEHREKVISKDSEIE 120

Query: 121 VLEKHKNAELISVKDEVRVKEMDQSAAKTDTVGNEAQGELNVNEVFKEETQE 164
             E+      +      +  E+D +   +D       G LN+      E  E
Sbjct: 121 ETEEFDTESPLP-----KAVELDMNLTDSDQTKEAKTGNLNLGLCLNSEGTE 167

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BLAST of Clc09G11780 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 72/222 (32.43%), Postives = 105/222 (47.30%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS       SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAQKLLLCRWTPIHPPTSSEADG-----------ATAPPDEPPKRKFRYTPY 120
                  SN   LLL +W P+    +   DG                ++PP+R+F+Y P 
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 LTATKQ-FDCFGCDVQIAVLEKHKNAELISVKDEVRV---KEMDQSAAKTDTVGNEAQGE 180
               +Q  +    +    + E  K  E   V+ E +V   K +++S+ K   V  E + +
Sbjct: 121 AVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEV--EVEEK 180

Query: 181 LNVNEVFKEETQETSKILNSP------RGGSRNNLDLALCLN 187
            ++N+V  E+ Q   KI+         +  + + +DL L LN
Sbjct: 181 PDINDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLN 219

[Close]

BLAST of Clc09G11780 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16
Identity = 65/202 (32.18%), Postives = 93/202 (46.04%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYQPSSQSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS       SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAQKLLLCRWTPIHPPTSSEADG-----------ATAPPDEPPKRKFRYTPY 120
                  SN   LLL +W P+    +   DG                ++PP+R+F+Y P 
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVP- 120

Query: 121 LTATKQFDCFGCDVQIAVLEKHKNAELISVKDEVRVKE-----MDQSAAKTDTVGNEAQG 172
                          IAVLE+ K  E+  ++++ +++E      D    + D V  +   
Sbjct: 121 ---------------IAVLEEQKK-EITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTV 180

The following BLAST results are available for this feature:

BLAST of Clc09G11780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898202.1	3.2e-85	86.43	uncharacterized protein LOC120085942 [Benincasa hispida]	[more]
XP_004151087.1	2.4e-80	82.83	uncharacterized protein LOC101212909 [Cucumis sativus] >KGN44051.1 hypothetical ...	[more]
XP_022936275.1	4.1e-80	82.41	uncharacterized protein LOC111442943 [Cucurbita moschata]	[more]
XP_023536003.1	5.9e-79	80.90	uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo]	[more]
KAG6592060.1	7.7e-79	81.41	hypothetical protein SDJN03_14406, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc09G11780 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G11780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8E5	1.2e-80	82.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1	[more]
A0A6J1FD66	2.0e-80	82.41	uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC1114429...	[more]
A0A6J1ILX5	2.4e-78	80.90	uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793...	[more]
A0A5D3DHK3	1.6e-77	80.50	Hybrid signal transduction protein dokA isoform X2 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BHG2	3.5e-77	80.50	uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=...	[more]

BLAST of Clc09G11780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55210.1	1.8e-17	36.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.2	2.6e-16	32.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.1	7.6e-16	32.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..88
None	No IPR available	PANTHER	PTHR34572	GOLGIN FAMILY A PROTEIN	coord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G11780.2	Clc09G11780.2	mRNA