Clc09G10530 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G10530
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Anaphase-promoting complex subunit 11
Location	ClcChr09: 9281652 .. 9283743 (+)
RNA-Seq Expression	Clc09G10530
Synteny	Clc09G10530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGTTTACAAAACAAGATCCTCAGGTTTGTTCAACCAAATGGTTGCAATCATGTTGTGATTGGTCGTATTAATGTTACCATTAATCATTTCTATGTTGTTGATGACGTCGTAATTTTTGGTGTCCTAGCAACGATAAACTTTACATGATCTCTGGCATTGCTAAAAAAAGTTAATCTCTAGTGTCACTGAAAAAAGGAAATCTTGGCATAATTCAATTATTTGAAAAGGATGTTTGTTGATATGATATCTAGTTTAAGCAAAACTACTCTATCTGGCATCAAATATCAACCACAATGAAATTGTTCACTAAGCCGGATTCCTTGTTTATTTGGTTGATAGCCTCCCCCTTGATTATCTTGGAATGCCCCTTGGAGATAATCTCAGTTCCTTCTCTTTTTGGAATACAATGATTGAAATAGTCTTTTGAAGATTGAATAGATTATAAAAAAAAAGAAATTGCTGTTTATTTCTAAGAGGGAATATTCAATCTGTCTTGTCTAGTCTCACCACTTAATTCATTTCCATCTTTCAGGATGACAGTGATCTTAAGAACAGATTTTCTAGTGACAAAAAATGGTGGTTGGCTTGCTCTTGCCAACCTCAAAGTTTGGCATATAGTTCTGATCACCAAATGGGTCCGGATTACCCCATGAAAGAGTCTATATAGCCCATCATTACCAGTAAATCTGTACGTGATTTTCATCCATGGCTCACAAATTGCCATGGAAAACTTCAAAGAAATAGCCCTTGAAAATTTGGTGTAAATGCAGGTCTCTCTTACATTTTTCTTTGGTTTCAAGATTGGCAGTAGCCATAATATTAGCTTCTAGGGAATGACGCTCTTTCCTTCTGTTTCCCTGCTTTAAGGTAAGAATTCAGAGGTTTGCAATCATCTCTTTCGACCCTGTCAAACTACTCCGTCTTTTGCTTTCCTCTTTCCACAATTCAACTTGAATTGGTATCATCCATTTTCCACAACTCATGCCACTGAGCAGGTCCTTTTGGGACACCTCTTCTGAAGCAAGGCAAAGGTTCTTGGAAGTGTCTAGTCTCTAGGTGTTTCGAGGGAAACTTAGCTTGGAAAAGGCCACAAAATCTTTCAAGGAAAAATTTGCAACTTTATGAAATTTGGTAGGTTAGTCACTTCACATTTTTTACTTGGTGTGCTTTCTGTTACTCTCTTTTGTAATTTAGATGTCTTTTTATTATTGCCACTGAGAGGAATTTTCTGTATTCTCTTCGACTTATTTGGGTCGACTTCTTGTCATATGCTTTTGTATCTCTTTTCTCTTGTCATTCTCGACCAAATATAATACGACCATTCCAATTATATTCCTGTCAGTATGATAGTTCTGTTGGTTGTTGCACAATATTCATCTGCATCAATACATTAGAAATGGTATCTTTCTATCAACTGCATCTGCAATTAGATTTTCCTTGACTCGGATTCCCTCCGTAAACTATGTTCGGGGTTCAAAAAGAGTAAGTTCCCACATTTCTTTTCTTATAGTTCCTACCTGGAGTATAATTAACTGCTTTGTTATCCTAAGATATTTTCATCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGCCCATTGAGTGAGTGATGAGTCAACTAGGCCTTGCCTTCGCATCCTCAAACCTTTTCTCCTGATATCAATCTTTGCAACTCACAGTTGATTCGCTATGTTTAAGATTATATACACATGCACATATATATTATAAGTGAGCTCGAAAAACCATCTAATTGGTAGGGGTACACTAATTAACAACGAATTGAAGGTTACAACGTGTTTTAGGAAATCCTTTAGATGTTTATTTTTCTTTGAACAAGATGGCAATGACCCCTTATTTTGTCTCTCTAAATGCAGTTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGATGA

mRNA sequence

ATGGAAGGGTTTACAAAACAAGATCCTCAGGATGACAGTGATCTTAAGAACAGATTTTCTAGTGACAAAAAATGGTGGTTGGCTTGCTCTTGCCAACCTCAAAGTTTGGCATATAGTTCTGATCACCAAATGGGTCCGGATTACCCCATGAAAGAATGTCTTTTTATTATTGCCACTGAGAGGAATTTTCTGTATTCTCTTCGACTTATTTGGGTCGACTTCTTGTCATATGCTTTTGTATCTCTTTTCTCTTGTCATTCTCGACCAAATATAATACGACCATTCCAATTATATTCCTGTCAGTATGATAGTTCTATTTTCCTTGACTCGGATTCCCTCCGTAAACTATGTTCGGGGTTCAAAAAGAATATTTTCATCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGATGA

Coding sequence (CDS)

ATGGAAGGGTTTACAAAACAAGATCCTCAGGATGACAGTGATCTTAAGAACAGATTTTCTAGTGACAAAAAATGGTGGTTGGCTTGCTCTTGCCAACCTCAAAGTTTGGCATATAGTTCTGATCACCAAATGGGTCCGGATTACCCCATGAAAGAATGTCTTTTTATTATTGCCACTGAGAGGAATTTTCTGTATTCTCTTCGACTTATTTGGGTCGACTTCTTGTCATATGCTTTTGTATCTCTTTTCTCTTGTCATTCTCGACCAAATATAATACGACCATTCCAATTATATTCCTGTCAGTATGATAGTTCTATTTTCCTTGACTCGGATTCCCTCCGTAAACTATGTTCGGGGTTCAAAAAGAATATTTTCATCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGATGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCCATCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGATGA

Protein sequence

MEGFTKQDPQDDSDLKNRFSSDKKWWLACSCQPQSLAYSSDHQMGPDYPMKECLFIIATERNFLYSLRLIWVDFLSYAFVSLFSCHSRPNIIRPFQLYSCQYDSSIFLDSDSLRKLCSGFKKNIFIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

Homology

[Close]

BLAST of Clc09G10530 vs. NCBI nr
Match: KGN44481.1 (hypothetical protein Csa_016037 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 105/176 (59.66%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 43  QMGPDYPMKECLFI--IATERNFLYSLRLIWVDFL-------SYAFVSLFSCHSRPNIIR 102
           QMGPDYPMKE   +       + +++L    V+ L        ++ +SL  C+  P    
Sbjct: 40  QMGPDYPMKESTHVPDFHPWNSEVFNLLFYPVELLELLLSSSQFSQLSLNWCYPCPT--- 99

Query: 103 PFQLYSCQYDSSIFLDSDSLRKLCSGFKKNIFIPSVKYRWHAVASWTWNAQDETCGICRM 162
                  Q    IFLD D+LRK   G  K          WHAVASWTWNAQDETCGICRM
Sbjct: 100 -------QAIDEIFLDLDALRKRMFGVWK---------EWHAVASWTWNAQDETCGICRM 159

Query: 163 AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 210
           AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 160 AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 196

[Close]

BLAST of Clc09G10530 vs. NCBI nr
Match: KYP42684.1 (Anaphase-promoting complex subunit 11, partial [Cajanus cajan])

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-46
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 125 FIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC 184
           F   VKYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC
Sbjct: 7   FFLYVKYRWHAVSSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC 66

Query: 185 ILKWVNSQTSQAHCPMCRREWQFKG 210
           ILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 67  ILKWVNSQTSQAHCPMCRREWQFKG 91

[Close]

BLAST of Clc09G10530 vs. NCBI nr
Match: KAB2630342.1 (ring finger [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 196.4 bits (498), Expect = 2.4e-46
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 128 SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 187
           SV Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK
Sbjct: 6   SVSYKWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 65

Query: 188 WVNSQTSQAHCPMCRREWQFKG 210
           WVNSQTSQAHCPMCRREWQFKG
Sbjct: 66  WVNSQTSQAHCPMCRREWQFKG 87

[Close]

BLAST of Clc09G10530 vs. NCBI nr
Match: GAV69476.1 (zf-Apc11 domain-containing protein, partial [Cephalotus follicularis])

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-46
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 128 SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 187
           SVK RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK
Sbjct: 11  SVKARWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70

Query: 188 WVNSQTSQAHCPMCRREWQFKG 210
           WVNSQTSQAHCPMCRREWQFKG
Sbjct: 71  WVNSQTSQAHCPMCRREWQFKG 92

[Close]

BLAST of Clc09G10530 vs. NCBI nr
Match: XP_022143644.1 (uncharacterized protein LOC111013505 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 9.1e-46
Identity = 84/100 (84.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 115 KLCSGF-----KKNIFIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC 174
           K C GF      KNI   + +  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC
Sbjct: 69  KHCLGFLGGDESKNI---TAQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC 128

Query: 175 PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 210
           PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 129 PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 165

[Close]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot
Match: Q9M9L0 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-46
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 132 RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS 191
           +WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS
Sbjct: 7   QWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNS 66

Query: 192 QTSQAHCPMCRREWQFK 209
           QTSQAHCPMCRREWQFK
Sbjct: 67  QTSQAHCPMCRREWQFK 83

[Close]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot
Match: Q3ZCF6 (Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q
Sbjct: 8   WNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLNAQ 67

Query: 193 TSQAHCPMCRREWQFK 209
             Q HCPMCR+EW+FK
Sbjct: 68  QVQQHCPMCRQEWKFK 83

[Close]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot
Match: Q9CPX9 (Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36
Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q
Sbjct: 8   WNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLNAQ 67

Query: 193 TSQAHCPMCRREWQFK 209
             Q HCPMCR+EW+FK
Sbjct: 68  QVQQHCPMCRQEWKFK 83

[Close]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot
Match: Q9NYG5 (Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 54/76 (71.05%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q
Sbjct: 8   WNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLHAQ 67

Query: 193 TSQAHCPMCRREWQFK 209
             Q HCPMCR+EW+FK
Sbjct: 68  QVQQHCPMCRQEWKFK 83

[Close]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot
Match: Q5R8A2 (Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 54/76 (71.05%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q
Sbjct: 8   WNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILKWLHAQ 67

Query: 193 TSQAHCPMCRREWQFK 209
             Q HCPMCR+EW+FK
Sbjct: 68  QVQQHCPMCRQEWKFK 83

[Close]

BLAST of Clc09G10530 vs. ExPASy TrEMBL
Match: A0A0A0K9J6 (Anaphase-promoting complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_7G306890 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.9e-51
Identity = 105/176 (59.66%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 43  QMGPDYPMKECLFI--IATERNFLYSLRLIWVDFL-------SYAFVSLFSCHSRPNIIR 102
           QMGPDYPMKE   +       + +++L    V+ L        ++ +SL  C+  P    
Sbjct: 40  QMGPDYPMKESTHVPDFHPWNSEVFNLLFYPVELLELLLSSSQFSQLSLNWCYPCPT--- 99

Query: 103 PFQLYSCQYDSSIFLDSDSLRKLCSGFKKNIFIPSVKYRWHAVASWTWNAQDETCGICRM 162
                  Q    IFLD D+LRK   G  K          WHAVASWTWNAQDETCGICRM
Sbjct: 100 -------QAIDEIFLDLDALRKRMFGVWK---------EWHAVASWTWNAQDETCGICRM 159

Query: 163 AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 210
           AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 160 AFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 196

[Close]

BLAST of Clc09G10530 vs. ExPASy TrEMBL
Match: A0A151RJC8 (Anaphase-promoting complex subunit 11 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_035901 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.2e-47
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 125 FIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC 184
           F   VKYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC
Sbjct: 7   FFLYVKYRWHAVSSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHC 66

Query: 185 ILKWVNSQTSQAHCPMCRREWQFKG 210
           ILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 67  ILKWVNSQTSQAHCPMCRREWQFKG 91

[Close]

BLAST of Clc09G10530 vs. ExPASy TrEMBL
Match: A0A5N5HW07 (Anaphase-promoting complex subunit 11 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_007861 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 128 SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 187
           SV Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK
Sbjct: 6   SVSYKWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 65

Query: 188 WVNSQTSQAHCPMCRREWQFKG 210
           WVNSQTSQAHCPMCRREWQFKG
Sbjct: 66  WVNSQTSQAHCPMCRREWQFKG 87

[Close]

BLAST of Clc09G10530 vs. ExPASy TrEMBL
Match: A0A1Q3BN88 (Anaphase-promoting complex subunit 11 (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12977 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 128 SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 187
           SVK RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK
Sbjct: 11  SVKARWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70

Query: 188 WVNSQTSQAHCPMCRREWQFKG 210
           WVNSQTSQAHCPMCRREWQFKG
Sbjct: 71  WVNSQTSQAHCPMCRREWQFKG 92

[Close]

BLAST of Clc09G10530 vs. ExPASy TrEMBL
Match: A0A6J1CPX8 (Anaphase-promoting complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC111013505 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 4.4e-46
Identity = 84/100 (84.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 115 KLCSGF-----KKNIFIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC 174
           K C GF      KNI   + +  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC
Sbjct: 69  KHCLGFLGGDESKNI---TAQKEWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDC 128

Query: 175 PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 210
           PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 129 PLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 165

[Close]

BLAST of Clc09G10530 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 11  WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 70

Query: 193 TSQAHCPMCRREWQFK 209
           TSQAHCPMCRREWQFK
Sbjct: 71  TSQAHCPMCRREWQFK 86

[Close]

BLAST of Clc09G10530 vs. TAIR 10
Match: AT3G05870.2 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 133 WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 192
           WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 11  WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 70

Query: 193 TSQAHCPMCRREWQFK 209
           TSQAHCPMCRREWQFK
Sbjct: 71  TSQAHCPMCRREWQFK 86

[Close]

BLAST of Clc09G10530 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 132 RWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCIL 191
           +W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI 
Sbjct: 36  KWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 95

Query: 192 KWVNSQTSQAHCPMCRREWQFK 209
           +W+  +T Q  CP+   EW+F+
Sbjct: 96  RWL--KTRQV-CPLDNSEWEFQ 114

[Close]

BLAST of Clc09G10530 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14
Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 103 DSSIFLDSDSLRKLCSGFKKNIFIPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDC 162
           +S + +   S   + S   KN     +K +W AVA W W+   + C ICR      C +C
Sbjct: 5   NSDVIMGESSSISVPSSSSKNSKRFELK-KWSAVALWAWDIVVDNCAICRNHIMDLCIEC 64

Query: 163 -----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 209
                    ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Sbjct: 65  LANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDVCEWEFQ 111

[Close]

BLAST of Clc09G10530 vs. TAIR 10
Match: AT5G26640.1 (BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 7.0e-12
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 140 TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL 172
           TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Sbjct: 5   TWDAQDETCGLCRMPFDASCPDCKLPEDDCPL 36

The following BLAST results are available for this feature:

BLAST of Clc09G10530 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44481.1	1.2e-50	59.66	hypothetical protein Csa_016037 [Cucumis sativus]	[more]
KYP42684.1	1.1e-46	94.12	Anaphase-promoting complex subunit 11, partial [Cajanus cajan]	[more]
KAB2630342.1	2.4e-46	96.34	ring finger [Pyrus ussuriensis x Pyrus communis]	[more]
GAV69476.1	3.1e-46	97.56	zf-Apc11 domain-containing protein, partial [Cephalotus follicularis]	[more]
XP_022143644.1	9.1e-46	84.00	uncharacterized protein LOC111013505 [Momordica charantia]	[more]

BLAST of Clc09G10530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9L0	1.5e-46	97.40	Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 P...	[more]
Q3ZCF6	5.2e-36	72.37	Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1	[more]
Q9CPX9	5.2e-36	72.37	Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 S...	[more]
Q9NYG5	2.0e-35	71.05	Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV...	[more]
Q5R8A2	2.0e-35	71.05	Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV...	[more]

BLAST of Clc09G10530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9J6	5.9e-51	59.66	Anaphase-promoting complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_7G306890...	[more]
A0A151RJC8	5.2e-47	94.12	Anaphase-promoting complex subunit 11 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1...	[more]
A0A5N5HW07	1.2e-46	96.34	Anaphase-promoting complex subunit 11 OS=Pyrus ussuriensis x Pyrus communis OX=2...	[more]
A0A1Q3BN88	1.5e-46	97.56	Anaphase-promoting complex subunit 11 (Fragment) OS=Cephalotus follicularis OX=3...	[more]
A0A6J1CPX8	4.4e-46	84.00	Anaphase-promoting complex subunit 11 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Clc09G10530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05870.1	1.4e-47	98.68	anaphase-promoting complex/cyclosome 11	[more]
AT3G05870.2	1.4e-47	98.68	anaphase-promoting complex/cyclosome 11	[more]
AT5G20570.1	1.2e-14	39.02	RING-box 1	[more]
AT3G42830.1	2.6e-14	34.23	RING/U-box superfamily protein	[more]
AT5G26640.1	7.0e-12	81.25	BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 125..209 e-value: 6.3E-26 score: 92.4
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	PFAM	PF12861	zf-ANAPC11	coord: 132..208 e-value: 1.3E-37 score: 127.7
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	CDD	cd16456	RING-H2_APC11	coord: 145..207 e-value: 4.35765E-41 score: 132.011
None	No IPR available	PANTHER	PTHR11210:SF1	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11	coord: 130..208
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 130..208
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 132..208
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 159..202 score: 10.984472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G10530.2	Clc09G10530.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0045842	positive regulation of mitotic metaphase/anaphase transition
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005680	anaphase-promoting complex
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding