Clc09G02710 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGTATTACTTCCCAGTCCCCATTGGTTTAGGAATTTAAACTTGTTTATAAATTATAATTACTCTTTGCTCATAAAATCTCTATCAAAAGTTTTTGATTTTCACTCCATTTGTAGAATTTCTTAGCAAGATTCAGAGCATTTTCGATACTCCGCTTTAATTCTTCTCTTCAGGTATCGATCGCTTTCTCTACCTCTAAATTTCTCGTTTCGTTACTTCAATTCCGCATTTGACTTCTTTTGATACCGTCGCTTTTCTACGTTGTTTTCCTTTGTTTGGTTTTGAGTTTCGTTCTTTTCAATTTTGTAAACTGTAGTTATATCGTGTTTTTCATATGTTGATTTCTACTCTTTTATCTTGTTCCGTTTGTACTTTTTGTATTGTTGAATGAGTAGAAACGTTTTCTTTTTTTTTTTTTTAACTTTTTTTTTTTATTTTTTATATATATATATTTTTGATATTTACAGGGTTAGAATTAGGATCATTGGAAGTATGAGACTAAGGAAGGGGGATCAAGTTGAGGTGTTGAGCAAGAAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTATTTCTGGGAATGGTCGTTCGTATAGCGTAAGATTTTTCTCTTCGGAGGAAGCAATGGAGAAGGTACCGAGGAGAGTGATAAGGCCTTGTCCTCCCCCCGTCGAAGGTTCAAATGTTTGGGATGCTGGTGATCTTGCTGAAGTCTTCCACAATTCCTCGTGGAAACAAGCAAAAATAATGAAGATCGTTGGGGTTAATTGCTACATGGTAAGAATACTTGGATCACCATTAGACGTCATGGTTAGGAAATCTAATTTGAGAAGGCGACAGGCTTGGCATGATGGCCGATGGTTTCTCCTAGGGAAGGTACATCTCCTAACAACTTCATACACAAAGTTCCATAATCCCTCTTTCGTATTCTCCTTTGTTTACAAATTCATTGTTTTTGTTTATGTAATATGGATTCTGAAGTCATCTGTTTGCTTGCTAAATTTATTCTGTTTTATTGGATTACTGTGATTTGTCTTCATGCGTTGTATTACAAATTACCTATTATTTTGTACTTAAAGCAATTATTGAACCATCATCCAATACGTTATTTCTTTGGCAGGCCATGGAAGATTCAGGTTCATTGTCTAGGAATAGGCAGATAGATCAAAACACGGTGAGAAGCAAGGATCAACAGCTTGTGGTGACGCTTTCTACTGGACCTCGAAAGAGGCCATTGCCTAATCAATTCATAAATCACAAAGTATCTGTCCAGAAAAGGAAAGTCACTGAAAAAGATGTTAGGTGTTTGCAGTCATTAGCGATAACTACCAATATGTACTCAACCCAAGAGTTGAACACAATTAGATTGAGCTCAAACGTTCCAACTGAAAATACCGAAGTCACTACAGGTGATGGTGGTTTGAGAGAGGGCAACCTTATTCAAGGAACTTCAACCCACATTTACACGGATAGTTGTACATCTTCTGTCGGCAGTAATAGTTCCACTGATGATTTTTTCAATGTGCCATTTGTTTCTGTAGCTCATTGTAGTAAAAAAGTTGAGGATATGGATTGTTACAGTGACGCTGAGTCATCTACAGGAAGAGGACACGAGGAAGAAGATCCATGCTCCTATGAGGAAGAATTAGCTAGATCCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGCATTATATGCTTCTGGACCTTTAAGTTGGGAAGACGAAGGGCAGGTTTCAAACATTCGTGCTTCACTTCACATATCTAATGATGAATATTTGATGGAGCTGAGAAATCTAATGTCTGCTAATAAACGGACATCCGTATGATTTTGAACAGTTATTCTTTGTTCCTAAATTTACTGTATCCCTTGATATCATTCTGTGGGGTATGTTTTTACTGTGCATCATTTGTTTGGAAACTTGGAAAGCACCCAATTGATTTGTAAATACTATTGGGAAATGAGTATGGCTCGGTGTTATTAATATACTTCTTTTCTGTTCTTTTTTTCTATTTTCTTTTTTTTGCAATGTCAATTCTTTCTTTTGTGTCACTCATACAGTCTGTTTGATAGCACTAGGATATTGAAGAGTATTTTCCATAGATGAATTTAAGGGTCCTTACATTTCCTCTTATCTGCTCAGGGTATACAGTGTACTTATTGTGTTGTATATTATCTAATCTTATAATGTCCTCGGCAGCCTATGGCACACTTCATTTGAGGAAATACTTGGCTCCTTTTCTGGGTAGATCATCATGGGATATGACGTCCAAATTTCTTGCGTATATGCTTACGGCAAGCCATTGGTTGAGTAATCTCTTGCTTTTTTATGCTTTTCTGGAATCTAATTTAGTTATGTTTGATAGTAGTAGAGATGCAAGTTGATAACTGATAGATTAAATTTAGAAAAGAAAAAAAAAAAGATAACAATCCCGAGTATTTAAATATTGTGTCCATCGTGTTTGGTCAATTTCAATTAAATACTGGACCTGGTCTTATAGACTCTGATCAACCCTACCCCCCAGGGCTTCTATTCATTTGGGTTATTCTGAAAACCACATAAAAGTAAATTTTCTGTAGGTTGCAGTTGCTACCAATTGTTATCTGACCTTCTCATATGATCTCAACCGTTACATTCATCCTTTTTGTTATACACTTCGTTTTCTTATTCTCCATGGAGTCTGGACAATGTAGATTAGACACAGACTACACAGTACAGGCCTGCAGTTGGGGAACGACAGTGCTAATTTTTTATGGTAACAAAAAACAAAAAAAGTTTGTGTAGAAATTTCTATTGTGAATGAAAAATTGTGGCCAAGATTGTTTCAGGGGACGGGGGCAATGGTTGTGGTGGTCCTTGCTTGTCCTCATCAAACTGCAATACTTAGGACTTGTAAGTGTTTAAAAAGTTTTTTTGTCGCACTTAGAAGCACATAGAAGTTAATTTAAACGTTTTATCTGCAATCTATCAAATACCTGATAATTTGCTAGTGAACAGAAATAGTTTTGATCTTTCACACTCCTCTTCTGATCAGTTGGCGAAGCAACTGGGTAAGGAGAAGAATAGCAGTTCAAAGTAGCTATCTTCAACAAAATTGTCTTAGCTATTCGCTGATGGTGAATGAGAGAAATTTATGATATTCTAGCTCTTATAACTGCGTTGGAAATTGTTCGGAAATAACGCTTTGGTGGATTTAAAAGTTAACTTCTTTGAAGTTTTTGAACCTATTATCAGTTAATGAAGCAGCTGAGCAACTTAAAATGAAGATTGAGCCTCAAAGTTTAAGGGGAATGCTCAGCTTCTCATTGTTGCAGGAAAGCTTCATGCCGGAGTCAGCGGCTGATGCTGGTAAAGAGAGGATTTTGCCCTCGTGCTTTTTACACAGGCAATGTGCTTCCTTCTCCACCACTGCTTATAAATTTCTTAGTTATAGAATCTTTTGTAGTTATAAATGACTCAATCAATCTTTAA CGTATTACTTCCCAGTCCCCATTGGTTTAGGAATTTAAACTTGTTTATAAATTATAATTACTCTTTGCTCATAAAATCTCTATCAAAAGTTTTTGATTTTCACTCCATTTGTAGAATTTCTTAGCAAGATTCAGAGCATTTTCGATACTCCGCTTTAATTCTTCTCTTCAGGGTTAGAATTAGGATCATTGGAAGTATGAGACTAAGGAAGGGGGATCAAGTTGAGGTGTTGAGCAAGAAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTATTTCTGGGAATGGTCGTTCGTATAGCGTAAGATTTTTCTCTTCGGAGGAAGCAATGGAGAAGGTACCGAGGAGAGTGATAAGGCCTTGTCCTCCCCCCGTCGAAGGTTCAAATGTTTGGGATGCTGGTGATCTTGCTGAAGTCTTCCACAATTCCTCGTGGAAACAAGCAAAAATAATGAAGATCGTTGGGGTTAATTGCTACATGGTAAGAATACTTGGATCACCATTAGACGTCATGGTTAGGAAATCTAATTTGAGAAGGCGACAGGCTTGGCATGATGGCCGATGGTTTCTCCTAGGGAAGGCCATGGAAGATTCAGGTTCATTGTCTAGGAATAGGCAGATAGATCAAAACACGGTGAGAAGCAAGGATCAACAGCTTGTGGTGACGCTTTCTACTGGACCTCGAAAGAGGCCATTGCCTAATCAATTCATAAATCACAAAGTATCTGTCCAGAAAAGGAAAGTCACTGAAAAAGATGTTAGGTGTTTGCAGTCATTAGCGATAACTACCAATATGTACTCAACCCAAGAGTTGAACACAATTAGATTGAGCTCAAACGTTCCAACTGAAAATACCGAAGTCACTACAGGTGATGGTGGTTTGAGAGAGGGCAACCTTATTCAAGGAACTTCAACCCACATTTACACGGATAGTTGTACATCTTCTGTCGGCAGTAATAGTTCCACTGATGATTTTTTCAATGTGCCATTTGTTTCTGTAGCTCATTGTAGTAAAAAAGTTGAGGATATGGATTGTTACAGTGACGCTGAGTCATCTACAGGAAGAGGACACGAGGAAGAAGATCCATGCTCCTATGAGGAAGAATTAGCTAGATCCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGCATTATATGCTTCTGGACCTTTAAGTTGGGAAGACGAAGGGCAGGTTTCAAACATTCGTGCTTCACTTCACATATCTAATGATGAATATTTGATGGAGCTGAGAAATCTAATGTCTGCTAATAAACGGACATCCGGGACGGGGGCAATGGTTGTGGTGGTCCTTGCTTGTCCTCATCAAACTGCAATACTTAGGACTTTGAACAGAAATAGTTTTGATCTTTCACACTCCTCTTCTGATCAGTTGGCGAAGCAACTGGGTAAGGAGAAGAATAGCAGTTCAAAGAAAGCTTCATGCCGGAGTCAGCGGCTGATGCTGGTAAAGAGAGGATTTTGCCCTCGTGCTTTTTACACAGGCAATGTGCTTCCTTCTCCACCACTGCTTATAAATTTCTTAGTTATAGAATCTTTTGTAGTTATAAATGACTCAATCAATCTTTAA ATGAGACTAAGGAAGGGGGATCAAGTTGAGGTGTTGAGCAAGAAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTATTTCTGGGAATGGTCGTTCGTATAGCGTAAGATTTTTCTCTTCGGAGGAAGCAATGGAGAAGGTACCGAGGAGAGTGATAAGGCCTTGTCCTCCCCCCGTCGAAGGTTCAAATGTTTGGGATGCTGGTGATCTTGCTGAAGTCTTCCACAATTCCTCGTGGAAACAAGCAAAAATAATGAAGATCGTTGGGGTTAATTGCTACATGGTAAGAATACTTGGATCACCATTAGACGTCATGGTTAGGAAATCTAATTTGAGAAGGCGACAGGCTTGGCATGATGGCCGATGGTTTCTCCTAGGGAAGGCCATGGAAGATTCAGGTTCATTGTCTAGGAATAGGCAGATAGATCAAAACACGGTGAGAAGCAAGGATCAACAGCTTGTGGTGACGCTTTCTACTGGACCTCGAAAGAGGCCATTGCCTAATCAATTCATAAATCACAAAGTATCTGTCCAGAAAAGGAAAGTCACTGAAAAAGATGTTAGGTGTTTGCAGTCATTAGCGATAACTACCAATATGTACTCAACCCAAGAGTTGAACACAATTAGATTGAGCTCAAACGTTCCAACTGAAAATACCGAAGTCACTACAGGTGATGGTGGTTTGAGAGAGGGCAACCTTATTCAAGGAACTTCAACCCACATTTACACGGATAGTTGTACATCTTCTGTCGGCAGTAATAGTTCCACTGATGATTTTTTCAATGTGCCATTTGTTTCTGTAGCTCATTGTAGTAAAAAAGTTGAGGATATGGATTGTTACAGTGACGCTGAGTCATCTACAGGAAGAGGACACGAGGAAGAAGATCCATGCTCCTATGAGGAAGAATTAGCTAGATCCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGCATTATATGCTTCTGGACCTTTAAGTTGGGAAGACGAAGGGCAGGTTTCAAACATTCGTGCTTCACTTCACATATCTAATGATGAATATTTGATGGAGCTGAGAAATCTAATGTCTGCTAATAAACGGACATCCGGGACGGGGGCAATGGTTGTGGTGGTCCTTGCTTGTCCTCATCAAACTGCAATACTTAGGACTTTGAACAGAAATAGTTTTGATCTTTCACACTCCTCTTCTGATCAGTTGGCGAAGCAACTGGGTAAGGAGAAGAATAGCAGTTCAAAGAAAGCTTCATGCCGGAGTCAGCGGCTGATGCTGGTAAAGAGAGGATTTTGCCCTCGTGCTTTTTACACAGGCAATGTGCTTCCTTCTCCACCACTGCTTATAAATTTCTTAGTTATAGAATCTTTTGTAGTTATAAATGACTCAATCAATCTTTAA MRLRKGDQVEVLSKKEVSSGSWSCAEIISGNGRSYSVRFFSSEEAMEKVPRRVIRPCPPPVEGSNVWDAGDLAEVFHNSSWKQAKIMKIVGVNCYMVRILGSPLDVMVRKSNLRRRQAWHDGRWFLLGKAMEDSGSLSRNRQIDQNTVRSKDQQLVVTLSTGPRKRPLPNQFINHKVSVQKRKVTEKDVRCLQSLAITTNMYSTQELNTIRLSSNVPTENTEVTTGDGGLREGNLIQGTSTHIYTDSCTSSVGSNSSTDDFFNVPFVSVAHCSKKVEDMDCYSDAESSTGRGHEEEDPCSYEEELARSHRSELSVFRSFIRALYASGPLSWEDEGQVSNIRASLHISNDEYLMELRNLMSANKRTSGTGAMVVVVLACPHQTAILRTLNRNSFDLSHSSSDQLAKQLGKEKNSSSKKASCRSQRLMLVKRGFCPRAFYTGNVLPSPPLLINFLVIESFVVINDSINL Homology
BLAST of Clc09G02710 vs. NCBI nr
Match: XP_038899468.1 (uncharacterized protein LOC120086754 isoform X1 [Benincasa hispida]) HSP 1 Score: 628.6 bits (1620), Expect = 4.2e-176 Identity = 321/368 (87.23%), Postives = 341/368 (92.66%), Query Frame = 0
BLAST of Clc09G02710 vs. NCBI nr
Match: XP_008461067.1 (PREDICTED: uncharacterized protein LOC103499769 isoform X1 [Cucumis melo]) HSP 1 Score: 604.4 bits (1557), Expect = 8.5e-169 Identity = 309/366 (84.43%), Postives = 327/366 (89.34%), Query Frame = 0
BLAST of Clc09G02710 vs. NCBI nr
Match: XP_011659547.1 (uncharacterized protein LOC101203701 isoform X3 [Cucumis sativus]) HSP 1 Score: 577.8 bits (1488), Expect = 8.5e-161 Identity = 295/366 (80.60%), Postives = 321/366 (87.70%), Query Frame = 0
BLAST of Clc09G02710 vs. NCBI nr
Match: XP_011659542.1 (uncharacterized protein LOC101203701 isoform X1 [Cucumis sativus]) HSP 1 Score: 577.8 bits (1488), Expect = 8.5e-161 Identity = 295/366 (80.60%), Postives = 321/366 (87.70%), Query Frame = 0
BLAST of Clc09G02710 vs. NCBI nr
Match: KAA0058782.1 (JHL25H03.10 [Cucumis melo var. makuwa] >TYK10576.1 JHL25H03.10 [Cucumis melo var. makuwa]) HSP 1 Score: 559.7 bits (1441), Expect = 2.4e-155 Identity = 305/420 (72.62%), Postives = 331/420 (78.81%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy Swiss-Prot
Match: O22897 (DUF724 domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=DUF6 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 6.6e-07 Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy TrEMBL
Match: A0A1S3CDW0 (uncharacterized protein LOC103499769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499769 PE=4 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 4.1e-169 Identity = 309/366 (84.43%), Postives = 327/366 (89.34%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy TrEMBL
Match: A0A0A0KBX9 (ENT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433350 PE=4 SV=1) HSP 1 Score: 577.8 bits (1488), Expect = 4.1e-161 Identity = 295/366 (80.60%), Postives = 321/366 (87.70%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy TrEMBL
Match: A0A5A7USE1 (JHL25H03.10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002300 PE=4 SV=1) HSP 1 Score: 559.7 bits (1441), Expect = 1.2e-155 Identity = 305/420 (72.62%), Postives = 331/420 (78.81%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy TrEMBL
Match: A0A6J1JXT9 (uncharacterized protein LOC111488477 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488477 PE=4 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 4.9e-154 Identity = 288/366 (78.69%), Postives = 310/366 (84.70%), Query Frame = 0
BLAST of Clc09G02710 vs. ExPASy TrEMBL
Match: A0A6J1GP59 (uncharacterized protein LOC111455870 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455870 PE=4 SV=1) HSP 1 Score: 542.7 bits (1397), Expect = 1.5e-150 Identity = 285/366 (77.87%), Postives = 307/366 (83.88%), Query Frame = 0
BLAST of Clc09G02710 vs. TAIR 10
Match: AT4G32440.1 (Plant Tudor-like RNA-binding protein ) HSP 1 Score: 198.0 bits (502), Expect = 1.7e-50 Identity = 145/387 (37.47%), Postives = 213/387 (55.04%), Query Frame = 0
BLAST of Clc09G02710 vs. TAIR 10
Match: AT4G32440.2 (Plant Tudor-like RNA-binding protein ) HSP 1 Score: 188.0 bits (476), Expect = 1.8e-47 Identity = 140/376 (37.23%), Postives = 205/376 (54.52%), Query Frame = 0
BLAST of Clc09G02710 vs. TAIR 10
Match: AT5G20030.1 (Plant Tudor-like RNA-binding protein ) HSP 1 Score: 169.9 bits (429), Expect = 5.0e-42 Identity = 132/369 (35.77%), Postives = 184/369 (49.86%), Query Frame = 0
BLAST of Clc09G02710 vs. TAIR 10
Match: AT4G32440.3 (Plant Tudor-like RNA-binding protein ) HSP 1 Score: 146.4 bits (368), Expect = 5.9e-35 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 0
BLAST of Clc09G02710 vs. TAIR 10
Match: AT2G25590.1 (Plant Tudor-like protein ) HSP 1 Score: 132.9 bits (333), Expect = 6.8e-31 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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