Clc09G01920 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGCGACACGTCAGCTTTCAAAATCTTCACTGTATGCAACGACGTCGCATTGTTCACTTCCTTAGCCGTTGTGATCGTTTTGATCAGCGTGATTCCGTTCCGACGGAAGCCGCAGATTGTGGTGGTGGCGGTGGCGCAGAAGGTGATTTGGGTGGCGGCGTCGTTTATGGCGACGGGGTACGTGGCGGCGATATGGGTAGTGGTCCCACACGATGAAGAAGGGAAGGGGAAATGGGTGACGGTGGTGATTGTGGCGGTGAGTGGGGGCATTCTGGGAATTGTGTTTATTGGGTTGACTGTGATGTTAATTGAGCACCATGTTCATAAATCGAAGAGGAGGAGAAGGATGAGAATTAGCGAAAGTAAAGAGGATTCCATGGAAATGGAAGAAGTAGAGAGTTTGAATTCCGATATTGAAAATTGTTATCGAAGAGGATATCGCTCTTTCTAA ATGGTGGGCGACACGTCAGCTTTCAAAATCTTCACTGTATGCAACGACGTCGCATTGTTCACTTCCTTAGCCGTTGTGATCGTTTTGATCAGCGTGATTCCGTTCCGACGGAAGCCGCAGATTGTGGTGGTGGCGGTGGCGCAGAAGGTGATTTGGGTGGCGGCGTCGTTTATGGCGACGGGGTACGTGGCGGCGATATGGGTAGTGGTCCCACACGATGAAGAAGGGAAGGGGAAATGGGTGACGGTGGTGATTGTGGCGGTGAGTGGGGGCATTCTGGGAATTGTGTTTATTGGGTTGACTGTGATGTTAATTGAGCACCATGTTCATAAATCGAAGAGGAGGAGAAGGATGAGAATTAGCGAAAGTAAAGAGGATTCCATGGAAATGGAAGAAGTAGAGAGTTTGAATTCCGATATTGAAAATTGTTATCGAAGAGGATATCGCTCTTTCTAA ATGGTGGGCGACACGTCAGCTTTCAAAATCTTCACTGTATGCAACGACGTCGCATTGTTCACTTCCTTAGCCGTTGTGATCGTTTTGATCAGCGTGATTCCGTTCCGACGGAAGCCGCAGATTGTGGTGGTGGCGGTGGCGCAGAAGGTGATTTGGGTGGCGGCGTCGTTTATGGCGACGGGGTACGTGGCGGCGATATGGGTAGTGGTCCCACACGATGAAGAAGGGAAGGGGAAATGGGTGACGGTGGTGATTGTGGCGGTGAGTGGGGGCATTCTGGGAATTGTGTTTATTGGGTTGACTGTGATGTTAATTGAGCACCATGTTCATAAATCGAAGAGGAGGAGAAGGATGAGAATTAGCGAAAGTAAAGAGGATTCCATGGAAATGGAAGAAGTAGAGAGTTTGAATTCCGATATTGAAAATTGTTATCGAAGAGGATATCGCTCTTTCTAA MVGDTSAFKIFTVCNDVALFTSLAVVIVLISVIPFRRKPQIVVVAVAQKVIWVAASFMATGYVAAIWVVVPHDEEGKGKWVTVVIVAVSGGILGIVFIGLTVMLIEHHVHKSKRRRRMRISESKEDSMEMEEVESLNSDIENCYRRGYRSF Homology
BLAST of Clc09G01920 vs. NCBI nr
Match: XP_038899257.1 (ankyrin repeat-containing protein At5g02620-like [Benincasa hispida]) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64 Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0
BLAST of Clc09G01920 vs. NCBI nr
Match: KAA0059325.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK04002.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Clc09G01920 vs. NCBI nr
Match: XP_008462185.2 (PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Clc09G01920 vs. NCBI nr
Match: XP_004141835.1 (ankyrin repeat-containing protein NPR4 [Cucumis sativus] >KGN45401.1 hypothetical protein Csa_016899 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 8.5e-54 Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Clc09G01920 vs. NCBI nr
Match: KAG6593480.1 (Ankyrin repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198.4 bits (503), Expect = 4.5e-47 Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy Swiss-Prot
Match: A2CIR5 (Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR4 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04 Identity = 45/143 (31.47%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy TrEMBL
Match: A0A5D3BYQ1 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002000 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy TrEMBL
Match: A0A1S3CHW2 (LOW QUALITY PROTEIN: ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC103500607 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.2e-58 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy TrEMBL
Match: A0A0A0KC83 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447160 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy TrEMBL
Match: A0A6J1KKJ7 (ankyrin repeat-containing protein At5g02620-like OS=Cucurbita maxima OX=3661 GN=LOC111494887 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.4e-47 Identity = 113/150 (75.33%), Postives = 128/150 (85.33%), Query Frame = 0
BLAST of Clc09G01920 vs. ExPASy TrEMBL
Match: A0A6J1HJK8 (ankyrin repeat-containing protein NPR4-like OS=Cucurbita moschata OX=3662 GN=LOC111464154 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.1e-46 Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Clc09G01920 vs. TAIR 10
Match: AT1G10340.1 (Ankyrin repeat family protein ) HSP 1 Score: 97.8 bits (242), Expect = 7.8e-21 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of Clc09G01920 vs. TAIR 10
Match: AT1G10340.2 (Ankyrin repeat family protein ) HSP 1 Score: 97.8 bits (242), Expect = 7.8e-21 Identity = 52/114 (45.61%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of Clc09G01920 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein ) HSP 1 Score: 91.3 bits (225), Expect = 7.3e-19 Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of Clc09G01920 vs. TAIR 10
Match: AT2G24600.4 (Ankyrin repeat family protein ) HSP 1 Score: 91.3 bits (225), Expect = 7.3e-19 Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of Clc09G01920 vs. TAIR 10
Match: AT5G54710.1 (Ankyrin repeat family protein ) HSP 1 Score: 90.9 bits (224), Expect = 9.5e-19 Identity = 50/129 (38.76%), Postives = 84/129 (65.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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