Clc08G17150 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G17150
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box protein
Location	ClcChr08: 27450113 .. 27452974 (-)
RNA-Seq Expression	Clc08G17150
Synteny	Clc08G17150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACTTTAAAAATATTTAAAAAAAAGTATAGGGTATAAAACTATAATTCGACTAATCAATTGGATTGACCATGAAAAATGCAGTTAATTGGATAAGTTTTGTTCTAAGAGATTGGGCCATTTCTTGGAACACTCTTAAATAAGTTTGTGTCGGCAGATTACCTCTGAGAATCTCTCAAGGCATCTTCGATTCGAGAGAATAATTCCTTACTCCGATAAAGAATCTTCCAATTTGCCACCATTTTTTCCAGATTTGCTCTTCCCTCCAGCACAGGAAACCCCATCTAGTAGTTTATTTGGTTAATTTCATTGGGAAAATCCGGGACCGATTTTTCAGAGAAAATCTATTCATAGAACTGCAAACATGGCGAACCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCGTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTCTCTCTCTGCAGGAATGACCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGAAAGGGAAAAATCACTTACAGGTTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACAATCAGCGTCATATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCAGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGACTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAGTTTGCGGATTTAGGAGAATCTGATTTCTCCGATTGCGATTTGATTCCGATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCTGACATTCGCTTATCCAAATTCCCCAGAACAAAGGAAGAAGGGATTCCGCCGAAGTTCAAGCTCAGCCAATTTACGGGCGGAGGACGGTGTAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTTCGGGAAGCTTACCGGACCGGTTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGCCCGGGAGGGGATAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAAGGAAAGGCTAGGAAAAAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGTGTTGTCTCCCTCCCTTACATCCTTGTGTTTATGTGCTCTTTTGGAACAGTTCTATTTGTTTTCTGGGGAACTTTTGAGGTTCCAAGAGCTAGCTACTTCTTTGAACTAGCTTGATATGATATACTCAATACAACAAAATATTAAAAACAATGCTACATAAAAATGAGAATATTAATGGCTGGGAAACATACAAACCATCTGATTTCAGAAAATGCAGGTGGGTCTATTGAGATTTCTATGTCTCTTTAGCTAATGTGATCTTTGTTTAGCTCTGGATATCTGTATCTTCTCAGTATTAGTATCAGAAGATTTACATTTTTGTTAACTTATTAGCTGAGCTGAATAAGGAAACATGCTCTGTTTTTTGTAAACCTGGAATAAGTTGTTAAAGAAACACTATGAACACTTCTTATCATGGGTTAGAAGTAGAACAGCTTCATTGCGTCTGTTGATTTTGATTTCCATTCTTGAGAGTGGTACAAAGGTGCTGGTTATGTGAGATGATGTAGCATGGATGATTGGATTCCTATTTGGTCCTGCAGGGATTCAGTGATGATTTGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGTCGGAGAGTTGGGGACTTGTCCGAACACCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCCAATACTACATTCTTGGAAGCTCCATTCTCCTTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTTCCTTCAATTGAAAATAAAAACATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGCACTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGTACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGACCTGAAGCACCTTGCTCGAAATGGTTCTATTCTAGATACTGTGGATTAATGTATTTGTTGATTCTTCTTTTAACTAACAATGTAGCCATTTGATGAATTCTTTGGCCAAGCATAATCTTTTGACAATGTACAGATTGATTATGATTCATTCATATGTCAAAAGTTCAAGAATACAATGTTCATTTTCTCTCTCTCTCTCTCTTTCATGTAAGCCTAAAGGGGCGTGGCTTAAAACATGTTATCTGCCTTGTTAGGATATGCAAGTTTGAGCCAACCTTCCAAAATAAGGACTTCAGAACGAAATAAAAGGGAAGGCTCAACGTATACTTTCTATTCTTTTTCTGCTTTGGGGGAATGCTATTGAGTTCTTGCGCTTTCATATTTACAGTTCAGTTTTGTCTTGTTATCATGGTATGAACCCAATTTAGAATATAAACCATAAAAGAAAATGCTGATTAATGTAATTATAATTATAAGCATCCATTCGAATTGACAGGAATACGATTCAAATCCACAAACATGCCACTCTTCTTCAACATGAAAGATGGTGAAATGAAACAGATCTTGGCATCTGTTTGAGCATGTTATTTGAACAATATTTAAG

mRNA sequence

AGAAACTTTAAAAATATTTAAAAAAAAGTATAGGGTATAAAACTATAATTCGACTAATCAATTGGATTGACCATGAAAAATGCAGTTAATTGGATAAGTTTTGTTCTAAGAGATTGGGCCATTTCTTGGAACACTCTTAAATAAGTTTGTGTCGGCAGATTACCTCTGAGAATCTCTCAAGGCATCTTCGATTCGAGAGAATAATTCCTTACTCCGATAAAGAATCTTCCAATTTGCCACCATTTTTTCCAGATTTGCTCTTCCCTCCAGCACAGGAAACCCCATCTAGTAGTTTATTTGGTTAATTTCATTGGGAAAATCCGGGACCGATTTTTCAGAGAAAATCTATTCATAGAACTGCAAACATGGCGAACCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCGTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTCTCTCTCTGCAGGAATGACCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGAAAGGGAAAAATCACTTACAGGTTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACAATCAGCGTCATATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCAGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGACTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAGTTTGCGGATTTAGGAGAATCTGATTTCTCCGATTGCGATTTGATTCCGATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCTGACATTCGCTTATCCAAATTCCCCAGAACAAAGGAAGAAGGGATTCCGCCGAAGTTCAAGCTCAGCCAATTTACGGGCGGAGGACGGTGTAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTTCGGGAAGCTTACCGGACCGGTTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGCCCGGGAGGGGATAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAAGGAAAGGCTAGGAAAAAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGGATTCAGTGATGATTTGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGTCGGAGAGTTGGGGACTTGTCCGAACACCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCCAATACTACATTCTTGGAAGCTCCATTCTCCTTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTTCCTTCAATTGAAAATAAAAACATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGCACTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGTACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGACCTGAAGCACCTTGCTCGAAATGGTTCTATTCTAGATACTGTGGATTAATGTATTTGTTGATTCTTCTTTTAACTAACAATGTAGCCATTTGATGAATTCTTTGGCCAAGCATAATCTTTTGACAATGTACAGATTGATTATGATTCATTCATATGTCAAAAGTTCAAGAATACAATGTTCATTTTCTCTCTCTCTCTCTCTTTCATGTAAGCCTAAAGGGGCGTGGCTTAAAACATGTTATCTGCCTTGTTAGGATATGCAAGTTTGAGCCAACCTTCCAAAATAAGGACTTCAGAACGAAATAAAAGGGAAGGCTCAACGTATACTTTCTATTCTTTTTCTGCTTTGGGGGAATGCTATTGAGTTCTTGCGCTTTCATATTTACAGTTCAGTTTTGTCTTGTTATCATGGTATGAACCCAATTTAGAATATAAACCATAAAAGAAAATGCTGATTAATGTAATTATAATTATAAGCATCCATTCGAATTGACAGGAATACGATTCAAATCCACAAACATGCCACTCTTCTTCAACATGAAAGATGGTGAAATGAAACAGATCTTGGCATCTGTTTGAGCATGTTATTTGAACAATATTTAAG

Coding sequence (CDS)

ATGGCGAACCTTAGCTCCGAATTTGACGAAATGGGTTCCTTCTCGTTCACTGACTTCCCTGAAGATGTTCAGTTATGCATCCTCTCCTTCCTCTCCCCCTCCGATATAGCGACTTTCTCTTGCACATCGAAGAGATTCGTCTCTCTCTGCAGGAATGACCGGAAACTGTGGTTTACTATGTGCGATCGGAAATGGGGATCCAAGACTCAGATCAAGAATTGGGGAAAGGGAAAAATCACTTACAGGTTACTCTATAAAACTCTTCATCAGTGGGAGAATCTGATCGGTTTTTGGCGCCGGAGTGGCTCGTCGACAATCAGCGTCATATCGCCGCCGTTGGTGTTCTTCGAATGGGGCCCAGATTTTCTTGCTGGGTCTAGGGTTTCTCCGTCGAAGAACGGTACTTACGACGTGTTTAAGTCTCCATTTCTATGGATGGGACTCTCTTCAGAAGGTCAGGCCATGAGTTTTATCGACCCCGATGGCCGTTCTGAGTTCGCCGGGAAGTTTGCGGATTTAGGAGAATCTGATTTCTCCGATTGCGATTTGATTCCGATCGATCTGAGCTTCATGGGGAAAAATCATTTTGTCATCGAGGAAAATCTGACATTCGCTTATCCAAATTCCCCAGAACAAAGGAAGAAGGGATTCCGCCGAAGTTCAAGCTCAGCCAATTTACGGGCGGAGGACGGTGTAGCCGCCGTAACCGATGTGAACGGAGTGGAAAGTGGCTCTTCGGGAAGCTTACCGGACCGGTTAATGTCAGAAATTTATCAGCATTTTGCGAATAGAACCAGCCCGGGAGGGGATAGAGCCTCAAGGAGGCAACGGAGGAGGGAGAAGGAAAGGCTAGGAAAAAGGAAGTGGGAACCAGAGCATTTCGTTAAAATTGTCAATTGCTCACCCACACCATTGCGGCCATTACAGGGCTTATGGAAGGGATTCAGTGATGATTTGAGCATGGATTTCTATCTTGTTGTATATGATGACATTGGTGGCATTGCCTGTCGGAGAGTTGGGGACTTGTCCGAACACCTCTCTAGTTATGCTCCCGTGTTTTGGACGTCCAATACTACATTCTTGGAAGCTCCATTCTCCTTGGAGGAAGAATATTTGCACGACTGCCGAATACATGTTCAGCCTCTAGCAGCCAATGACATTGATGAGCTAGTTCCTTCAATTGAAAATAAAAACATTTCTCGCATTCTTTGCGTCAACTCGAGTTATGATCTAGTCCTACCAGACCTGGCTGGAAGCACTCCAAATCCTCGGAATGTGGAGGGAAGAATTTGGCAGTACAGTAATGGTACTTTTGGGTTTGGTTTCCTTAGAGATAATTTTATTATAGACCTGAAGCACCTTGCTCGAAATGGTTCTATTCTAGATACTGTGGATTAA

Protein sequence

MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGPDFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNGVESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNCSPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTFLEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD

Homology

[Close]

BLAST of Clc08G17150 vs. NCBI nr
Match: XP_038886422.1 (F-box protein At3g12350 [Benincasa hispida])

HSP 1 Score: 928.3 bits (2398), Expect = 2.6e-266
Identity = 445/465 (95.70%), Postives = 453/465 (97.42%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSE+DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQI NWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTIS  SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQINNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISNTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+GLSSEGQAMSFIDPDGRSEFAGKFADLG+S FSD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWIGLSSEGQAMSFIDPDGRSEFAGKFADLGDSGFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENLTFAYP SPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPTSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKI+NC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIINC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG SDDLSMDFYLVVYDDIGGIACRRVGD SE LSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISDDLSMDFYLVVYDDIGGIACRRVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS EEEYLHDCR+HVQPLAANDI+ELVPSIEN +ISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LEAPFSAEEEYLHDCRVHVQPLAANDIEELVPSIENNSISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQY NGTFGFGFLRDNFIIDLKHLARNGSILDTV+
Sbjct: 421 PNPRNVEGRIWQYCNGTFGFGFLRDNFIIDLKHLARNGSILDTVE 465

[Close]

BLAST of Clc08G17150 vs. NCBI nr
Match: XP_004142896.1 (F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_018642 [Cucumis sativus])

HSP 1 Score: 909.8 bits (2350), Expect = 9.4e-261
Identity = 436/465 (93.76%), Postives = 449/465 (96.56%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWM LSSEGQAMSFI+ DGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AA+TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of Clc08G17150 vs. NCBI nr
Match: XP_008444539.1 (PREDICTED: F-box protein At3g12350 [Cucumis melo])

HSP 1 Score: 897.9 bits (2319), Expect = 3.7e-257
Identity = 433/465 (93.12%), Postives = 445/465 (95.70%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWM LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSI+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Clc08G17150 vs. NCBI nr
Match: KAA0060958.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 896.7 bits (2316), Expect = 8.2e-257
Identity = 432/465 (92.90%), Postives = 445/465 (95.70%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+ LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSI+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Clc08G17150 vs. NCBI nr
Match: XP_022131422.1 (F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g12350 [Momordica charantia])

HSP 1 Score: 889.0 bits (2296), Expect = 1.7e-254
Identity = 426/465 (91.61%), Postives = 439/465 (94.41%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           M NLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDR+WGSKTQIKNWGKG I YRLLYKTLHQWENLIGFWRRSG STI V SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTY V KSPFLWMGLS EGQ M+FIDPDGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDL+PID+SFMGKNHFVIEENLTFAYPNSPEQ KKGFRRSSSSANLRAED VAA TDVNG
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VE GS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTP RPLQGLWKG SDD+SMDFYLVVYDDIGGIACRRVGD SE +SSYAPVFWTSN TF
Sbjct: 301 SPTPSRPLQGLWKGISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LE+PFSL EEYLHDCRIHV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIW+YSNGTFGFGFLRDNFIIDLKH+A+NGSILDTV+
Sbjct: 421 PNPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of Clc08G17150 vs. ExPASy Swiss-Prot
Match: Q84WW1 (F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.3e-111
Identity = 219/453 (48.34%), Postives = 287/453 (63.36%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  +  SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNGVESGSSGSLPDRLMS 255
            ++EEN  F   N  E ++                        +G ES    S P+   S
Sbjct: 188 IMVEENRCFTNNNRREDQRS-----------------------SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKG 315
           E+Y   AN+TSPGGDR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWKG
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKG 307

Query: 316 FSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYA-PVFWTSNTTFLEAPFSLEEEYLH 375
           F +  S++ YLV YD++GGI CR+V DLS  LS Y  PVFWT   TF+ +PFS EEE L 
Sbjct: 308 FCEG-SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLL 367

Query: 376 DCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQY 435
           + RIH+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y
Sbjct: 368 NSRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLY 419

Query: 436 SNGTFGFGFLRDNFIIDLKHLA-RNGSILDTVD 466
            NGTFGFGFLRD FIIDLK +A  +G + D V+
Sbjct: 428 DNGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of Clc08G17150 vs. ExPASy TrEMBL
Match: A0A0A0LR36 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 4.6e-261
Identity = 436/465 (93.76%), Postives = 449/465 (96.56%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAG RVSPSKNGTYDVFKSPFLWM LSSEGQAMSFI+ DGRSEFAGKFADLGESDFSD
Sbjct: 121 DFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AA+TDV+ 
Sbjct: 181 CDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNTTF
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSA 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNG+I+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDTVE 465

[Close]

BLAST of Clc08G17150 vs. ExPASy TrEMBL
Match: A0A1S3BBA8 (F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.8e-257
Identity = 433/465 (93.12%), Postives = 445/465 (95.70%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWM LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSI+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Clc08G17150 vs. ExPASy TrEMBL
Match: A0A5A7V081 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 PE=4 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 4.0e-257
Identity = 432/465 (92.90%), Postives = 445/465 (95.70%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSS++DEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSDYDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSST SV SPPLVFFEWGP
Sbjct: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTTSVTSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLW+ LSS GQAMSFID DGRSE AGKFA+LGESD SD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWLTLSSAGQAMSFIDLDGRSELAGKFANLGESDLSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
            DLIPIDLSFMGKNHFVIEENL F YP SPE+ KKGFRRSSSSANL AEDG AAVTDV+ 
Sbjct: 181 SDLIPIDLSFMGKNHFVIEENLAFPYPTSPERSKKGFRRSSSSANLLAEDGAAAVTDVSR 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VESGS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRE+ERLGKRKWEPEHFVKIVNC
Sbjct: 241 VESGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRPLQGLWKG S+DLSMDFYLVVYDDIGGIACR+VGD SE LSSYAPVFWTSNT+F
Sbjct: 301 SPTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTSF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFS+EEE LHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LEAPFSVEEENLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSI+DTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSIMDTVE 465

[Close]

BLAST of Clc08G17150 vs. ExPASy TrEMBL
Match: A0A6J1BQZ2 (F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1)

HSP 1 Score: 889.0 bits (2296), Expect = 8.3e-255
Identity = 426/465 (91.61%), Postives = 439/465 (94.41%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           M NLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MVNLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDR+WGSKTQIKNWGKG I YRLLYKTLHQWENLIGFWRRSG STI V SPPLVFFEWGP
Sbjct: 61  CDRRWGSKTQIKNWGKGNIAYRLLYKTLHQWENLIGFWRRSGPSTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTY V KSPFLWMGLS EGQ M+FIDPDGRSEF+GKFAD GE   SD
Sbjct: 121 DFLAGSRVSPSKNGTYSVIKSPFLWMGLSPEGQVMNFIDPDGRSEFSGKFADWGE---SD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDL+PID+SFMGKNHFVIEENLTFAYPNSPEQ KKGFRRSSSSANLRAED VAA TDVNG
Sbjct: 181 CDLVPIDVSFMGKNHFVIEENLTFAYPNSPEQGKKGFRRSSSSANLRAEDAVAATTDVNG 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           VE GS GSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC
Sbjct: 241 VEIGSPGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTP RPLQGLWKG SDD+SMDFYLVVYDDIGGIACRRVGD SE +SSYAPVFWTSN TF
Sbjct: 301 SPTPSRPLQGLWKGISDDMSMDFYLVVYDDIGGIACRRVGDSSEQVSSYAPVFWTSNPTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LE+PFSL EEYLHDCRIHV+PLAANDIDELVPSIENK ISRILCVNSSYDLVLPDLAGST
Sbjct: 361 LESPFSLVEEYLHDCRIHVRPLAANDIDELVPSIENKTISRILCVNSSYDLVLPDLAGST 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIW+YSNGTFGFGFLRDNFIIDLKH+A+NGSILDTV+
Sbjct: 421 PNPRNVEGRIWEYSNGTFGFGFLRDNFIIDLKHIAQNGSILDTVE 462

[Close]

BLAST of Clc08G17150 vs. ExPASy TrEMBL
Match: A0A6J1KA40 (F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111492477 PE=4 SV=1)

HSP 1 Score: 840.1 bits (2169), Expect = 4.4e-240
Identity = 410/465 (88.17%), Postives = 422/465 (90.75%), Query Frame = 0


Query: 1   MANLSSEFDEMGSFSFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTM 60
           MANLSSE DE+GSFSFTDFPEDVQLCILSFLSPSDIA+FSCTSKRFVSLCRNDRKLWFTM
Sbjct: 1   MANLSSEIDEIGSFSFTDFPEDVQLCILSFLSPSDIASFSCTSKRFVSLCRNDRKLWFTM 60

Query: 61  CDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGP 120
           CDR+WGS TQI NWGKGKI YRLLYKTLHQWENLIGFWRRSGS TI V SPPLVFFEWGP
Sbjct: 61  CDRRWGSTTQINNWGKGKIAYRLLYKTLHQWENLIGFWRRSGSPTIGVSSPPLVFFEWGP 120

Query: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSD 180
           DFLAGSRVSPSKNGTYDVFKSPFLWMGLS E QAMSFIDPDGRS FAGKF DLGESDFSD
Sbjct: 121 DFLAGSRVSPSKNGTYDVFKSPFLWMGLSPEAQAMSFIDPDGRSGFAGKFGDLGESDFSD 180

Query: 181 CDLIPIDLSFMGKNHFVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNG 240
           CDLIPI+LSFMG NHF IEENLT AYPNSPE+R  G RRSS       ED +AAVTDVN 
Sbjct: 181 CDLIPIELSFMGTNHFSIEENLTLAYPNSPERRINGCRRSS------PEDSLAAVTDVNV 240

Query: 241 VESGSSGSLPDRLMSEIYQHFANRTSPGGDRASRRQRRREKERLGKRKWEPEHFVKIVNC 300
           V SGS GSL D LMSEIYQ FANRTSPGGDRASRRQRRREKERLGKRK E EHFVKIVNC
Sbjct: 241 VGSGSPGSLLDGLMSEIYQQFANRTSPGGDRASRRQRRREKERLGKRKLEAEHFVKIVNC 300

Query: 301 SPTPLRPLQGLWKGFSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYAPVFWTSNTTF 360
           SPTPLRP+QGLWKG SDD+ MDFYLVVYDDIGGIACRRVGD SE LSSY+PVFWTSNTTF
Sbjct: 301 SPTPLRPIQGLWKGISDDMRMDFYLVVYDDIGGIACRRVGDSSEGLSSYSPVFWTSNTTF 360

Query: 361 LEAPFSLEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGST 420
           LEAPFSLEEE+ HDCRIHV PL ANDIDELVPSIENK ISRIL VNSSYDLVLPDLAGS 
Sbjct: 361 LEAPFSLEEEHFHDCRIHVHPLPANDIDELVPSIENKRISRILRVNSSYDLVLPDLAGSV 420

Query: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGSILDTVD 466
           PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKH+ARNGSILDTV+
Sbjct: 421 PNPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHIARNGSILDTVE 459

[Close]

BLAST of Clc08G17150 vs. TAIR 10
Match: AT3G12350.1 (F-box family protein )

HSP 1 Score: 404.8 bits (1039), Expect = 9.2e-113
Identity = 219/453 (48.34%), Postives = 287/453 (63.36%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  +  SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNGVESGSSGSLPDRLMS 255
            ++EEN  F   N  E ++                        +G ES    S P+   S
Sbjct: 188 IMVEENRCFTNNNRREDQRS-----------------------SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWKG 315
           E+Y   AN+TSPGGDR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWKG
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWKG 307

Query: 316 FSDDLSMDFYLVVYDDIGGIACRRVGDLSEHLSSYA-PVFWTSNTTFLEAPFSLEEEYLH 375
           F +  S++ YLV YD++GGI CR+V DLS  LS Y  PVFWT   TF+ +PFS EEE L 
Sbjct: 308 FCEG-SIELYLVKYDEVGGIICRKVEDLS--LSRYTPPVFWTPKHTFIRSPFSAEEELLL 367

Query: 376 DCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSTPNPRNVEGRIWQY 435
           + RIH+ P A          +    +S +L + SS DLVLP   G+       EGR+W Y
Sbjct: 368 NSRIHISPFA---------EVHENVVSGMLYMKSSCDLVLPGEPGNGIGFLRGEGRVWLY 419

Query: 436 SNGTFGFGFLRDNFIIDLKHLA-RNGSILDTVD 466
            NGTFGFGFLRD FIIDLK +A  +G + D V+
Sbjct: 428 DNGTFGFGFLRDQFIIDLKRVALEDGCLADEVE 419

[Close]

BLAST of Clc08G17150 vs. TAIR 10
Match: AT3G12350.2 (F-box family protein )

HSP 1 Score: 274.2 bits (700), Expect = 1.9e-73
Identity = 144/299 (48.16%), Postives = 192/299 (64.21%), Query Frame = 0


Query: 16  FTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWG 75
           F + PED+QL ILS L+P++I++F+CTSKRF SLC+ D K+W  MCD++WG KT+I+ W 
Sbjct: 8   FCEIPEDLQLRILSLLTPAEISSFACTSKRFASLCQEDGKIWHVMCDQRWGKKTKIQKWA 67

Query: 76  KGKITYRLLYKTLHQWENLIGFWRRSGSSTISVISPPLVFFEWGPDFLAGSRVSPSKNGT 135
            G+I YR LYKTL   ENLIGFWR  G +  +  SPPLVFF+WG  F+ GSRV  + + T
Sbjct: 68  NGQIPYRHLYKTLKGLENLIGFWRLCGRANPAASSPPLVFFDWGSSFILGSRVLSTGDDT 127

Query: 136 YDVFKSPFLWMGLSSEGQAMSFIDPDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNH 195
           Y+V K+PFL MG+S EG++ +F+D  G         DL E + S+ +L+ +D++FMG  H
Sbjct: 128 YEVKKTPFLLMGISPEGRSENFLDLVG-GNLRSVDDDLKELEASN-NLVSVDVNFMGNGH 187

Query: 196 FVIEENLTFAYPNSPEQRKKGFRRSSSSANLRAEDGVAAVTDVNGVESGSSGSLPDRLMS 255
            ++EEN  F   N  E ++                        +G ES    S P+   S
Sbjct: 188 IMVEENRCFTNNNRREDQRS-----------------------SGDESDDLISSPN--FS 247

Query: 256 EIYQHFANRTSPGGDRASRRQRRREKERLGKR-KWEPEHFVKIVNCSPTPLRPLQGLWK 314
           E+Y   AN+TSPGGDR  RRQ+R+EKER   R KWEPEHF+K+ +CSPTP RPLQGLWK
Sbjct: 248 EMYTQLANKTSPGGDR--RRQKRKEKERQASRTKWEPEHFLKVADCSPTPTRPLQGLWK 277

The following BLAST results are available for this feature:

BLAST of Clc08G17150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886422.1	2.6e-266	95.70	F-box protein At3g12350 [Benincasa hispida]	[more]
XP_004142896.1	9.4e-261	93.76	F-box protein At3g12350 [Cucumis sativus] >KGN62441.1 hypothetical protein Csa_0...	[more]
XP_008444539.1	3.7e-257	93.12	PREDICTED: F-box protein At3g12350 [Cucumis melo]	[more]
KAA0060958.1	8.2e-257	92.90	F-box protein [Cucumis melo var. makuwa]	[more]
XP_022131422.1	1.7e-254	91.61	F-box protein At3g12350 [Momordica charantia] >XP_022131423.1 F-box protein At3g...	[more]

BLAST of Clc08G17150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW1	1.3e-111	48.34	F-box protein At3g12350 OS=Arabidopsis thaliana OX=3702 GN=At3g12350 PE=2 SV=1	[more]

BLAST of Clc08G17150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR36	4.6e-261	93.76	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354670 PE=4 ...	[more]
A0A1S3BBA8	1.8e-257	93.12	F-box protein At3g12350 OS=Cucumis melo OX=3656 GN=LOC103487829 PE=4 SV=1	[more]
A0A5A7V081	4.0e-257	92.90	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00920 ...	[more]
A0A6J1BQZ2	8.3e-255	91.61	F-box protein At3g12350 OS=Momordica charantia OX=3673 GN=LOC111004638 PE=4 SV=1	[more]
A0A6J1KA40	4.4e-240	88.17	F-box protein At3g12350-like OS=Cucurbita maxima OX=3661 GN=LOC111492477 PE=4 SV...	[more]

BLAST of Clc08G17150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12350.1	9.2e-113	48.34	F-box family protein	[more]
AT3G12350.2	1.9e-73	48.16	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 19..60 e-value: 1.5E-5 score: 34.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 14..55 e-value: 1.2E-7 score: 31.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 13..60 score: 11.48455
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..93 e-value: 3.0E-9 score: 38.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..285
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G17150.1	Clc08G17150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding