Clc08G16380 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACAAGAAGATAAGTAAATTCACATATTTTATAAATATTATAAGGTATTTTCATCTTTAGAACGTGGGATCTTTCAAGTGCTTGTAAAATGGTGCTCTCTTTATATTCATTTTATAAAATTTATGAAGTTTAATATCTTTGATCTTTTTTGACGTAGATCCCCAACACCTAGGTATACTATAAATACCGAAAACCACAACCAACAAAATCACAAAACAAAACTCATTCCCAGAAAGCAAATTAGAGAGCCTCCTTACCAGAGAAAAAATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGGGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGATCAATATAACATAAAATAGGTGTGGCAATAACGTCGATCCCTCCTTGTAATCTTCTTCTTCTACTCGATTATCCTTCTAAGCTTTGTATTATCTTAATAAAAATAAAAATGAATGGACTGGCTTGCTAGTCCTTTTTCTTTCTTTA TGACAAGAAGATAAGTAAATTCACATATTTTATAAATATTATAAGGTATTTTCATCTTTAGAACGTGGGATCTTTCAAGTGCTTGTAAAATGGTGCTCTCTTTATATTCATTTTATAAAATTTATGAAGTTTAATATCTTTGATCTTTTTTGACGTAGATCCCCAACACCTAGGTATACTATAAATACCGAAAACCACAACCAACAAAATCACAAAACAAAACTCATTCCCAGAAAGCAAATTAGAGAGCCTCCTTACCAGAGAAAAAATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGGGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGATCAATATAACATAAAATAGGTGTGGCAATAACGTCGATCCCTCCTTGTAATCTTCTTCTTCTACTCGATTATCCTTCTAAGCTTTGTATTATCTTAATAAAAATAAAAATGAATGGACTGGCTTGCTAGTCCTTTTTCTTTCTTTA ATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGGGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAANGNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGRDSGHYGHGNANHNGHYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY Homology
BLAST of Clc08G16380 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_022281 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 9.8e-40 Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Clc08G16380 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata]) HSP 1 Score: 136.0 bits (341), Expect = 3.0e-28 Identity = 86/168 (51.19%), Postives = 109/168 (64.88%), Query Frame = 0
BLAST of Clc08G16380 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27 Identity = 84/173 (48.55%), Postives = 105/173 (60.69%), Query Frame = 0
BLAST of Clc08G16380 vs. NCBI nr
Match: KAG6598377.1 (hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 7.3e-27 Identity = 85/168 (50.60%), Postives = 108/168 (64.29%), Query Frame = 0
BLAST of Clc08G16380 vs. NCBI nr
Match: KAG6598378.1 (hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13 Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = 0
BLAST of Clc08G16380 vs. ExPASy TrEMBL
Match: A0A0A0LKW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.8e-40 Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 0
BLAST of Clc08G16380 vs. ExPASy TrEMBL
Match: A0A6J1HD14 (zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28 Identity = 86/168 (51.19%), Postives = 109/168 (64.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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