Clc08G07840 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGCAAATAGGCTTTCCACAATTGCTGCCGAAATAGGGCAACTATATAATGAAATTCAGGAGCACCGTGGGTTGTTAAAAACTTATTTGAGGAGTGGGAGAACAAGAGATCTTGTTCGAAAGAAGCGCGCATTCACGCTGTCAGACAACGGGTCGAGGATTTGGAGGGAAGGCAGCAAGCGCTTCAAGCAGAGCAGCAAACACTTATGGTCACCCACAATCTTGAGGAGACTGACAAGTAGAGTTCGTTGA ATGGATGATGCAAATAGGCTTTCCACAATTGCTGCCGAAATAGGGCAACTATATAATGAAATTCAGGAGCACCGTGGGTTGTTAAAAACTTATTTGAGGAGTGGGAGAACAAGAGATCTTGTTCGAAAGAAGCGCGCATTCACGCTGTCAGACAACGGGTCGAGGATTTGGAGGGAAGGCAGCAAGCGCTTCAAGCAGAGCAGCAAACACTTATGGTCACCCACAATCTTGAGGAGACTGACAAGTAGAGTTCGTTGA ATGGATGATGCAAATAGGCTTTCCACAATTGCTGCCGAAATAGGGCAACTATATAATGAAATTCAGGAGCACCGTGGGTTGTTAAAAACTTATTTGAGGAGTGGGAGAACAAGAGATCTTGTTCGAAAGAAGCGCGCATTCACGCTGTCAGACAACGGGTCGAGGATTTGGAGGGAAGGCAGCAAGCGCTTCAAGCAGAGCAGCAAACACTTATGGTCACCCACAATCTTGAGGAGACTGACAAGTAGAGTTCGTTGA MDDANRLSTIAAEIGQLYNEIQEHRGLLKTYLRSGRTRDLVRKKRAFTLSDNGSRIWREGSKRFKQSSKHLWSPTILRRLTSRVR Homology
BLAST of Clc08G07840 vs. NCBI nr
Match: KZM89910.1 (hypothetical protein DCAR_022727 [Daucus carota subsp. sativus]) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Clc08G07840 vs. NCBI nr
Match: KJB06797.1 (hypothetical protein B456_001G159900 [Gossypium raimondii] >PPD86383.1 hypothetical protein GOBAR_DD16675 [Gossypium barbadense]) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Clc08G07840 vs. NCBI nr
Match: TMW81608.1 (hypothetical protein EJD97_008706 [Solanum chilense]) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-04 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Clc08G07840 vs. NCBI nr
Match: KAB2012677.1 (hypothetical protein ES319_D09G107000v1 [Gossypium barbadense] >TYG53583.1 hypothetical protein ES288_D09G120900v1 [Gossypium darwinii] >TYH53683.1 hypothetical protein ES332_D09G116800v1 [Gossypium tomentosum]) HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of Clc08G07840 vs. NCBI nr
Match: TYI64786.1 (hypothetical protein E1A91_D09G112400v1 [Gossypium mustelinum]) HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of Clc08G07840 vs. ExPASy TrEMBL
Match: M1AVS3 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Clc08G07840 vs. ExPASy TrEMBL
Match: A0A161ZTF6 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_022727 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Clc08G07840 vs. ExPASy TrEMBL
Match: A0A0D2LRW8 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159900 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05 Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of Clc08G07840 vs. ExPASy TrEMBL
Match: A0A6N2AIP9 (Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_008706 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Clc08G07840 vs. ExPASy TrEMBL
Match: A0A5D2JI17 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G116800v1 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|