Homology
BLAST of Clc08G04870 vs. NCBI nr
Match:
XP_022139698.1 (pentatricopeptide repeat-containing protein At3g29230-like [Momordica charantia])
HSP 1 Score: 1139.0 bits (2945), Expect = 0.0e+00
Identity = 545/603 (90.38%), Postives = 571/603 (94.69%), Query Frame = 0
Query: 11 IAKLLLDSVQKHPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSW 70
IAKLLLDSVQK PHR+LE+HFISLL+SCKTVALL+KVQAQIITHGFQHNEYVAPNVVS+W
Sbjct: 31 IAKLLLDSVQKQPHRVLEDHFISLLRSCKTVALLEKVQAQIITHGFQHNEYVAPNVVSAW 90
Query: 71 AGLKRMAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFP 130
A LKRMAYARHLFDHFPDPKVALWN+ RGY HN FYREV+ LFGKMKS DVRPNCFTFP
Sbjct: 91 ANLKRMAYARHLFDHFPDPKVALWNSILRGYAHNEFYREVVLLFGKMKSTDVRPNCFTFP 150
Query: 131 LVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLER 190
LVLKSCAK AF+EGEEIHCEVIKGGF GNQFVATTLIDVYSG RAIGSAYKVFV MLER
Sbjct: 151 LVLKSCAKINAFVEGEEIHCEVIKGGFRGNQFVATTLIDVYSGGRAIGSAYKVFVGMLER 210
Query: 191 NIVAWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMP 250
NIVAWTSMISGYILCNDV ARRLFDLAPERDVVLW+IMVSGYIEIG +EAARKLFD MP
Sbjct: 211 NIVAWTSMISGYILCNDVTFARRLFDLAPERDVVLWSIMVSGYIEIGHMEAARKLFDAMP 270
Query: 251 YRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKR 310
YRD MSWNTML+GYANNGD+EACE LFEEMPERNVFSWNGLIGGYAHNG FF+VL CFKR
Sbjct: 271 YRDVMSWNTMLSGYANNGDVEACEHLFEEMPERNVFSWNGLIGGYAHNGRFFDVLSCFKR 330
Query: 311 MLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCG 370
ML+DG VVPNDATLV VLSACARLGALDLGKWVHVYAATIGFK N+YVGNALIDMY+KCG
Sbjct: 331 MLLDGQVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKRNIYVGNALIDMYAKCG 390
Query: 371 VIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLC 430
VIENAMEVFGSMD KDLI+WNSVICGLATHG GADAL LFH+MK +G+KPDGITFIGVLC
Sbjct: 391 VIENAMEVFGSMDSKDLISWNSVICGLATHGCGADALNLFHRMKNSGKKPDGITFIGVLC 450
Query: 431 SCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADA 490
SCTHLGLVEEGISYFNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEFV+RMP++ADA
Sbjct: 451 SCTHLGLVEEGISYFNSMVHDYSIDPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPIKADA 510
Query: 491 VIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILM 550
VIWAA+LGACR YKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDL RWKDVARLKILM
Sbjct: 511 VIWAALLGACRTYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLSRWKDVARLKILM 570
Query: 551 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQ 610
RDTG KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS+GYEPNI+ELQ
Sbjct: 571 RDTGFKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSYGYEPNIMELQ 630
Query: 611 QGS 614
QGS
Sbjct: 631 QGS 633
BLAST of Clc08G04870 vs. NCBI nr
Match:
KAG6579204.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 550/606 (90.76%), Postives = 573/606 (94.55%), Query Frame = 0
Query: 8 MRDIAKLLLDSVQK-HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNV 67
+R AKLLLDSVQK HP+R+LEEHFISLL+SCKT LLQKVQAQIITHGFQHNEYVAPN+
Sbjct: 34 LRCEAKLLLDSVQKHHPYRVLEEHFISLLRSCKTAELLQKVQAQIITHGFQHNEYVAPNL 93
Query: 68 VSSWAGLKRMAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNC 127
VS+WAGLKRM YARHLFDHFPDPK+ALWNATFRGY N FYREVIFL GKMK MDVRPNC
Sbjct: 94 VSAWAGLKRMDYARHLFDHFPDPKLALWNATFRGYVRNEFYREVIFLSGKMKRMDVRPNC 153
Query: 128 FTFPLVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVE 187
FTFPLVLKSCAK AF+EGE+IHCEVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV
Sbjct: 154 FTFPLVLKSCAKISAFVEGEQIHCEVIKGGFEGNQFVATTLIDVYSVGRAIGSAYKVFVG 213
Query: 188 MLERNIVAWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLF 247
MLERN+VAWTSMISGYILCNDV ARRLFDLAPERDVVLWNIMVSGYIEIGD+ AARKLF
Sbjct: 214 MLERNVVAWTSMISGYILCNDVVFARRLFDLAPERDVVLWNIMVSGYIEIGDMAAARKLF 273
Query: 248 DTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLR 307
D MPYRD MSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIG YAH G FFEVL
Sbjct: 274 DAMPYRDVMSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGAYAHKGCFFEVLG 333
Query: 308 CFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMY 367
CFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMY
Sbjct: 334 CFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMY 393
Query: 368 SKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFI 427
SKCGVIENAMEVFGSMD KD+ITWNSVICGLATHG GADAL LFHQMKITG KPDGITFI
Sbjct: 394 SKCGVIENAMEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKITGVKPDGITFI 453
Query: 428 GVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPM 487
GVLCSCTHLGLV+EGIS+FNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEFV+RMPM
Sbjct: 454 GVLCSCTHLGLVKEGISHFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPM 513
Query: 488 EADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARL 547
EADAVIWAA+LGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRWKDVARL
Sbjct: 514 EADAVIWAALLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRWKDVARL 573
Query: 548 KILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNI 607
KILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHS+S+EIYGVLKGLMKLLRSFGYEPNI
Sbjct: 574 KILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSESEEIYGVLKGLMKLLRSFGYEPNI 633
Query: 608 VELQQG 613
+EL QG
Sbjct: 634 MELLQG 639
BLAST of Clc08G04870 vs. NCBI nr
Match:
XP_016901901.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo] >KAA0061615.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 541/592 (91.39%), Postives = 566/592 (95.61%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
HP +LEEHFISLL+SCKTVALLQKVQAQIITHGFQHN YVA NVV+SW GLK+MA+ARH
Sbjct: 2 HPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQHNGYVATNVVTSWVGLKQMAHARH 61
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGA 141
LFDHF DPKV LWNA FRGYFH AFY+EV+FLFGKMKSM VRPNCFTFPLVLKSCAK GA
Sbjct: 62 LFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKSCAKIGA 121
Query: 142 FLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISG 201
F+EGEEIH EVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV MLERNIVAWTSMISG
Sbjct: 122 FVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAWTSMISG 181
Query: 202 YILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTML 261
YILCN VA ARRLFDLAPERDVVLWNIMVSGYI+IGD++AARKLFDTMPYRDTMSWNTML
Sbjct: 182 YILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTMSWNTML 241
Query: 262 NGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPND 321
NGYANNGD+EACEQ+FEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDGLVVPND
Sbjct: 242 NGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDGLVVPND 301
Query: 322 ATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGS 381
ATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVF S
Sbjct: 302 ATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFES 361
Query: 382 MDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEG 441
MDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHLGLVEEG
Sbjct: 362 MDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG 421
Query: 442 ISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACR 501
SYFNSMV++YSITPQIEHYGCMVDLFGRAGLLDRAI+FV+RMPMEADAVIWAA+LGACR
Sbjct: 422 TSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAALLGACR 481
Query: 502 IYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGC 561
IYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG KKLPGC
Sbjct: 482 IYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGCKKLPGC 541
Query: 562 SLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQGS 614
SLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSFGYEPNI+ELQQ S
Sbjct: 542 SLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Clc08G04870 vs. NCBI nr
Match:
TYJ97821.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 538/590 (91.19%), Postives = 564/590 (95.59%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
HP +LEEHFISLL+SCKTVA+LQKVQAQIITHGFQHN YVA NVV++W GLK+MA+ARH
Sbjct: 2 HPRWVLEEHFISLLRSCKTVAVLQKVQAQIITHGFQHNGYVATNVVTTWVGLKQMAHARH 61
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGA 141
LFDHF DPKV LWNA FRGYFH AFYREV+FLFGKMKSM VRPNCFTFPLVLKSCAK GA
Sbjct: 62 LFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKSCAKIGA 121
Query: 142 FLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISG 201
F+EGEEIHCEVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV MLERNIVAWTSMISG
Sbjct: 122 FVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAWTSMISG 181
Query: 202 YILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTML 261
YILCN VA ARRLFDLAPERDVVLWNIMVSGYI+IGD++AARKLFDTMPYRDTMSWNTML
Sbjct: 182 YILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTMSWNTML 241
Query: 262 NGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPND 321
NGYANNGD+EACEQLFEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDGLVVPND
Sbjct: 242 NGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDGLVVPND 301
Query: 322 ATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGS 381
ATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVF S
Sbjct: 302 ATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFES 361
Query: 382 MDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEG 441
MDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHLGLVEEG
Sbjct: 362 MDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG 421
Query: 442 ISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACR 501
SYFNSMV++YSI PQIEHYGCMVDLFGRAGLLDRAI+FV+RMPMEADAVIWAA+LGACR
Sbjct: 422 TSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAALLGACR 481
Query: 502 IYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGC 561
IYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGSKKLPGC
Sbjct: 482 IYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGSKKLPGC 541
Query: 562 SLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQ 612
SLIEVNDSVVEFYSLDERHSQS+EIYGVL GLMKLLRSFGYEPNI+ELQQ
Sbjct: 542 SLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591
BLAST of Clc08G04870 vs. NCBI nr
Match:
KAG7016718.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 523/570 (91.75%), Postives = 542/570 (95.09%), Query Frame = 0
Query: 43 LLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARHLFDHFPDPKVALWNATFRGYF 102
LLQKVQAQIITHGFQHNEYVAPN+VS+WAGLKRM YARHLFDHFPDPK+ALWNATFRGY
Sbjct: 40 LLQKVQAQIITHGFQHNEYVAPNLVSAWAGLKRMDYARHLFDHFPDPKLALWNATFRGYV 99
Query: 103 HNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQF 162
N FYREVIFL GKMK MDVRPNCFTFPLVLKSCAK AF+EGE+IHCEVIKGGFEGNQF
Sbjct: 100 RNEFYREVIFLSGKMKRMDVRPNCFTFPLVLKSCAKISAFVEGEQIHCEVIKGGFEGNQF 159
Query: 163 VATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISGYILCNDVAHARRLFDLAPERD 222
VATTLIDVYS RAIGSAYKVFV MLERN+VAWTSMISGYILCNDV ARRLFDLAPERD
Sbjct: 160 VATTLIDVYSVGRAIGSAYKVFVGMLERNVVAWTSMISGYILCNDVVFARRLFDLAPERD 219
Query: 223 VVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPE 282
VVLWNIMVSGYIEIGD+ AARKLFD MPYRD MSWNTMLNGYANNGDIEACEQLFEEMPE
Sbjct: 220 VVLWNIMVSGYIEIGDMAAARKLFDAMPYRDVMSWNTMLNGYANNGDIEACEQLFEEMPE 279
Query: 283 RNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKW 342
RNVFSWNGLIG YAH G FFEVL CFKRMLIDGLVVPNDATLV VLSACARLGALDLGKW
Sbjct: 280 RNVFSWNGLIGAYAHKGCFFEVLGCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKW 339
Query: 343 VHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGS 402
VHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVFGSMD KD+ITWNSVICGLATHG
Sbjct: 340 VHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFGSMDSKDVITWNSVICGLATHGC 399
Query: 403 GADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYG 462
GADAL LFHQMKITG KPDGITFIGVLCSCTHLGLV+EGIS+FNSMVHDYSI PQIEHYG
Sbjct: 400 GADALNLFHQMKITGVKPDGITFIGVLCSCTHLGLVKEGISHFNSMVHDYSIVPQIEHYG 459
Query: 463 CMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPK 522
CMVDLFGRAGLLDRAIEFV+RMPMEADAVIWAA+LGACRI+KNIDL ELALQKLIQLEPK
Sbjct: 460 CMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIHKNIDLGELALQKLIQLEPK 519
Query: 523 NPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQ 582
NPANYVMLSNIYGD+GRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHS+
Sbjct: 520 NPANYVMLSNIYGDVGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSE 579
Query: 583 SKEIYGVLKGLMKLLRSFGYEPNIVELQQG 613
S+EIYGVLKGLMKLLRSFGYEPNI+EL QG
Sbjct: 580 SEEIYGVLKGLMKLLRSFGYEPNIMELLQG 609
BLAST of Clc08G04870 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 469.9 bits (1208), Expect = 4.3e-131
Identity = 245/639 (38.34%), Postives = 372/639 (58.22%), Query Frame = 0
Query: 17 DSVQKHPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSW---AGL 76
DS++ HP +SLL +CKT+ L+ + AQ+I G + Y ++
Sbjct: 29 DSIRNHPS-------LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF 88
Query: 77 KRMAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVL 136
+ + YA +F +P + +WN FRG+ ++ + L+ M S+ + PN +TFP VL
Sbjct: 89 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 148
Query: 137 KSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIV 196
KSCAK+ AF EG++IH V+K G + + +V T+LI +Y + A+KVF + R++V
Sbjct: 149 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 208
Query: 197 AWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTM---- 256
++T++I GY + +A++LFD P +DVV WN M+SGY E G+ + A +LF M
Sbjct: 209 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 268
Query: 257 --PYRDTM--------------------SW-------------NTMLNGYANNGDIEACE 316
P TM W N +++ Y+ G++E
Sbjct: 269 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 328
Query: 317 QLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARL 376
LFE +P ++V SWN LIGGY H + E L F+ ML G PND T++++L ACA L
Sbjct: 329 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHL 388
Query: 377 GALDLGKWVHVY--AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNS 436
GA+D+G+W+HVY G + +LIDMY+KCG IE A +VF S+ K L +WN+
Sbjct: 389 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 448
Query: 437 VICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDY 496
+I G A HG + LF +M+ G +PD ITF+G+L +C+H G+++ G F +M DY
Sbjct: 449 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 508
Query: 497 SITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELA 556
+TP++EHYGCM+DL G +GL A E + M ME D VIW ++L AC+++ N++L E
Sbjct: 509 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 568
Query: 557 LQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVE 612
+ LI++EP+NP +YV+LSNIY GRW +VA+ + L+ D G KK+PGCS IE++ V E
Sbjct: 569 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 628
BLAST of Clc08G04870 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 2.1e-125
Identity = 231/625 (36.96%), Postives = 356/625 (56.96%), Query Frame = 0
Query: 32 ISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNV-----VSSWAGLKRMAYARHLFDHF 91
ISL++ C ++ L++ +I G + Y A + +SS+A L+ YAR +FD
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLE---YARKVFDEI 93
Query: 92 PDPKVALWNATFRGYFHNAFYREVIFLFGKMKS-MDVRPNCFTFPLVLKSCAKNGAFLEG 151
P P WN R Y I+ F M S PN +TFP ++K+ A+ + G
Sbjct: 94 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 153
Query: 152 EEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISGYILC 211
+ +H +K + FVA +LI Y + SA KVF + E+++V+W SMI+G++
Sbjct: 154 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 213
Query: 212 NDVAHARRLFDLAPERDV---------------------------------------VLW 271
A LF DV L
Sbjct: 214 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 273
Query: 272 NIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVF 331
N M+ Y + G +E A++LFD M +D ++W TML+GYA + D EA ++ MP++++
Sbjct: 274 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 333
Query: 332 SWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVY 391
+WN LI Y NG E L F + + + N TLV+ LSACA++GAL+LG+W+H Y
Sbjct: 334 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 393
Query: 392 AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADA 451
G + N +V +ALI MYSKCG +E + EVF S++ +D+ W+++I GLA HG G +A
Sbjct: 394 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 453
Query: 452 LTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVD 511
+ +F++M+ KP+G+TF V C+C+H GLV+E S F+ M +Y I P+ +HY C+VD
Sbjct: 454 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 513
Query: 512 LFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPAN 571
+ GR+G L++A++F+ MP+ +W A+LGAC+I+ N++LAE+A +L++LEP+N
Sbjct: 514 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 573
Query: 572 YVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEI 612
+V+LSNIY LG+W++V+ L+ MR TG KK PGCS IE++ + EF S D H S+++
Sbjct: 574 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 633
BLAST of Clc08G04870 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 449.5 bits (1155), Expect = 6.0e-125
Identity = 220/575 (38.26%), Postives = 344/575 (59.83%), Query Frame = 0
Query: 25 RLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARHLFD 84
R+ EE L K C + ++++ AQII + ++AP ++S+ + ++ A +F+
Sbjct: 17 RIFEERLQDLPK-CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFN 76
Query: 85 HFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGAFLE 144
+P V L N+ R + N+ + F+F +M+ + + FT+P +LK+C+
Sbjct: 77 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 136
Query: 145 GEEIHCEVIKGGFEGNQFVATTLIDVYS--GARAIGSAYKVFVEMLERNIVAWTSMISGY 204
+ +H + K G + +V LID YS G + A K+F +M ER+ V+W SM+ G
Sbjct: 137 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 196
Query: 205 ILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLN 264
+ ++ ARRLFD P+RD++ WN M+ GY ++ A +LF+ MP R+T+SW+TM+
Sbjct: 197 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 256
Query: 265 GYANNGDIEACEQLFEEM--PERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPN 324
GY+ GD+E +F++M P +NV +W +I GYA G E R +M+ GL +
Sbjct: 257 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-D 316
Query: 325 DATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFG 384
A ++++L+AC G L LG +H N YV NAL+DMY+KCG ++ A +VF
Sbjct: 317 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 376
Query: 385 SMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEE 444
+ KDL++WN+++ GL HG G +A+ LF +M+ G +PD +TFI VLCSC H GL++E
Sbjct: 377 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 436
Query: 445 GISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGAC 504
GI YF SM Y + PQ+EHYGC+VDL GR G L AI+ V+ MPME + VIW A+LGAC
Sbjct: 437 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 496
Query: 505 RIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPG 564
R++ +D+A+ L L++L+P +P NY +LSNIY W+ VA ++ M+ G +K G
Sbjct: 497 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 556
Query: 565 CSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMK 596
S +E+ D + EF D+ H +S +IY +L L++
Sbjct: 557 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
BLAST of Clc08G04870 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-114
Identity = 213/572 (37.24%), Postives = 333/572 (58.22%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
H R +E +FI L+ K+ +K+ A II HG + ++ +V ++ M YA
Sbjct: 4 HGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKM--KSMDVRPNCFTFPLVLKSCAKN 141
LF+ +P V L+N+ R Y HN+ Y +VI ++ ++ KS ++ P+ FTFP + KSCA
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASL 123
Query: 142 GAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMI 201
G+ G+++H + K G
Sbjct: 124 GSCYLGKQVHGHLCKFG------------------------------------------- 183
Query: 202 SGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNT 261
P VV N ++ Y++ D+ A K+FD M RD +SWN+
Sbjct: 184 -------------------PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 243
Query: 262 MLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVP 321
+L+GYA G ++ + LF M ++ + SW +I GY G + E + F+ M + G + P
Sbjct: 244 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEP 303
Query: 322 NDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVF 381
++ +L++VL +CA+LG+L+LGKW+H+YA GF V NALI+MYSKCGVI A+++F
Sbjct: 304 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 363
Query: 382 GSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVE 441
G M+ KD+I+W+++I G A HG+ A+ F++M+ KP+GITF+G+L +C+H+G+ +
Sbjct: 364 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 423
Query: 442 EGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGA 501
EG+ YF+ M DY I P+IEHYGC++D+ RAG L+RA+E + MPM+ D+ IW ++L +
Sbjct: 424 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 483
Query: 502 CRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLP 561
CR N+D+A +A+ L++LEP++ NYV+L+NIY DLG+W+DV+RL+ ++R+ KK P
Sbjct: 484 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 511
Query: 562 GCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 592
G SLIEVN+ V EF S D EI VL+
Sbjct: 544 GGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
BLAST of Clc08G04870 vs. ExPASy Swiss-Prot
Match:
Q1PEU4 (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E9 PE=2 SV=2)
HSP 1 Score: 414.1 bits (1063), Expect = 2.8e-114
Identity = 216/547 (39.49%), Postives = 322/547 (58.87%), Query Frame = 0
Query: 51 IITHGFQHNEYVAPNVVSSWAGLKRMAYARHLFDHFPDPKVA-LWNATFRGYFHNAFYRE 110
++ H + N + + A + YAR LFD P + L N+ + Y Y +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 111 VIFLFGKM-KSMDVRPNCFTFPLVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLI 170
L+ + K P+ FTF + KSC+ + +G ++H ++ + GF + +V+T ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 171 DVYSGARAIGSAYKVFVEMLERNIVAWTSMISGYILCNDVAHARRLFDLAPE-RDVVLWN 230
D+Y+ +G A F EM R+ V+WT++ISGYI C ++ A +LFD P +DVV++N
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 231 IMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVFS 290
M+ G+++ GD+ +AR+LFD M ++ ++W TM++GY N DI+A +LF+ MPERN+ S
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 291 WNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYA 350
WN +IGGY N E +R F+ M + P+D T+++VL A + GAL LG+W H +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 351 ATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADAL 410
V V A++DMYSKCG IE A +F M K + +WN++I G A +G+ AL
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 411 TLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDL 470
LF M I EKPD IT + V+ +C H GLVEEG +F+ M + + +IEHYGCMVDL
Sbjct: 361 DLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDL 420
Query: 471 FGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANY 530
GRAG L A + + MP E + +I ++ L AC YK+I+ AE L+K ++LEP+N NY
Sbjct: 421 LGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 480
Query: 531 VMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIY 590
V+L N+Y RW D +K +MR +KK GCSLIE+N V EF S D H + I+
Sbjct: 481 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 540
Query: 591 GVLKGLM 595
VL L+
Sbjct: 541 LVLGDLL 545
BLAST of Clc08G04870 vs. ExPASy TrEMBL
Match:
A0A6J1CGA7 (pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charantia OX=3673 GN=LOC111010545 PE=4 SV=1)
HSP 1 Score: 1139.0 bits (2945), Expect = 0.0e+00
Identity = 545/603 (90.38%), Postives = 571/603 (94.69%), Query Frame = 0
Query: 11 IAKLLLDSVQKHPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSW 70
IAKLLLDSVQK PHR+LE+HFISLL+SCKTVALL+KVQAQIITHGFQHNEYVAPNVVS+W
Sbjct: 31 IAKLLLDSVQKQPHRVLEDHFISLLRSCKTVALLEKVQAQIITHGFQHNEYVAPNVVSAW 90
Query: 71 AGLKRMAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFP 130
A LKRMAYARHLFDHFPDPKVALWN+ RGY HN FYREV+ LFGKMKS DVRPNCFTFP
Sbjct: 91 ANLKRMAYARHLFDHFPDPKVALWNSILRGYAHNEFYREVVLLFGKMKSTDVRPNCFTFP 150
Query: 131 LVLKSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLER 190
LVLKSCAK AF+EGEEIHCEVIKGGF GNQFVATTLIDVYSG RAIGSAYKVFV MLER
Sbjct: 151 LVLKSCAKINAFVEGEEIHCEVIKGGFRGNQFVATTLIDVYSGGRAIGSAYKVFVGMLER 210
Query: 191 NIVAWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMP 250
NIVAWTSMISGYILCNDV ARRLFDLAPERDVVLW+IMVSGYIEIG +EAARKLFD MP
Sbjct: 211 NIVAWTSMISGYILCNDVTFARRLFDLAPERDVVLWSIMVSGYIEIGHMEAARKLFDAMP 270
Query: 251 YRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKR 310
YRD MSWNTML+GYANNGD+EACE LFEEMPERNVFSWNGLIGGYAHNG FF+VL CFKR
Sbjct: 271 YRDVMSWNTMLSGYANNGDVEACEHLFEEMPERNVFSWNGLIGGYAHNGRFFDVLSCFKR 330
Query: 311 MLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCG 370
ML+DG VVPNDATLV VLSACARLGALDLGKWVHVYAATIGFK N+YVGNALIDMY+KCG
Sbjct: 331 MLLDGQVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKRNIYVGNALIDMYAKCG 390
Query: 371 VIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLC 430
VIENAMEVFGSMD KDLI+WNSVICGLATHG GADAL LFH+MK +G+KPDGITFIGVLC
Sbjct: 391 VIENAMEVFGSMDSKDLISWNSVICGLATHGCGADALNLFHRMKNSGKKPDGITFIGVLC 450
Query: 431 SCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADA 490
SCTHLGLVEEGISYFNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEFV+RMP++ADA
Sbjct: 451 SCTHLGLVEEGISYFNSMVHDYSIDPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPIKADA 510
Query: 491 VIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILM 550
VIWAA+LGACR YKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDL RWKDVARLKILM
Sbjct: 511 VIWAALLGACRTYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLSRWKDVARLKILM 570
Query: 551 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQ 610
RDTG KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS+GYEPNI+ELQ
Sbjct: 571 RDTGFKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSYGYEPNIMELQ 630
Query: 611 QGS 614
QGS
Sbjct: 631 QGS 633
BLAST of Clc08G04870 vs. ExPASy TrEMBL
Match:
A0A5A7V6Y9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001800 PE=4 SV=1)
HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 541/592 (91.39%), Postives = 566/592 (95.61%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
HP +LEEHFISLL+SCKTVALLQKVQAQIITHGFQHN YVA NVV+SW GLK+MA+ARH
Sbjct: 2 HPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQHNGYVATNVVTSWVGLKQMAHARH 61
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGA 141
LFDHF DPKV LWNA FRGYFH AFY+EV+FLFGKMKSM VRPNCFTFPLVLKSCAK GA
Sbjct: 62 LFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKSCAKIGA 121
Query: 142 FLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISG 201
F+EGEEIH EVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV MLERNIVAWTSMISG
Sbjct: 122 FVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAWTSMISG 181
Query: 202 YILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTML 261
YILCN VA ARRLFDLAPERDVVLWNIMVSGYI+IGD++AARKLFDTMPYRDTMSWNTML
Sbjct: 182 YILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTMSWNTML 241
Query: 262 NGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPND 321
NGYANNGD+EACEQ+FEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDGLVVPND
Sbjct: 242 NGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDGLVVPND 301
Query: 322 ATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGS 381
ATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVF S
Sbjct: 302 ATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFES 361
Query: 382 MDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEG 441
MDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHLGLVEEG
Sbjct: 362 MDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG 421
Query: 442 ISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACR 501
SYFNSMV++YSITPQIEHYGCMVDLFGRAGLLDRAI+FV+RMPMEADAVIWAA+LGACR
Sbjct: 422 TSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAALLGACR 481
Query: 502 IYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGC 561
IYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG KKLPGC
Sbjct: 482 IYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGCKKLPGC 541
Query: 562 SLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQGS 614
SLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSFGYEPNI+ELQQ S
Sbjct: 542 SLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Clc08G04870 vs. ExPASy TrEMBL
Match:
A0A1S4E0Z4 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497177 PE=4 SV=1)
HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 541/592 (91.39%), Postives = 566/592 (95.61%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
HP +LEEHFISLL+SCKTVALLQKVQAQIITHGFQHN YVA NVV+SW GLK+MA+ARH
Sbjct: 2 HPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQHNGYVATNVVTSWVGLKQMAHARH 61
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGA 141
LFDHF DPKV LWNA FRGYFH AFY+EV+FLFGKMKSM VRPNCFTFPLVLKSCAK GA
Sbjct: 62 LFDHFLDPKVELWNAIFRGYFHKAFYKEVVFLFGKMKSMGVRPNCFTFPLVLKSCAKIGA 121
Query: 142 FLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISG 201
F+EGEEIH EVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV MLERNIVAWTSMISG
Sbjct: 122 FVEGEEIHSEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVVMLERNIVAWTSMISG 181
Query: 202 YILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTML 261
YILCN VA ARRLFDLAPERDVVLWNIMVSGYI+IGD++AARKLFDTMPYRDTMSWNTML
Sbjct: 182 YILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTMSWNTML 241
Query: 262 NGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPND 321
NGYANNGD+EACEQ+FEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDGLVVPND
Sbjct: 242 NGYANNGDVEACEQMFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDGLVVPND 301
Query: 322 ATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGS 381
ATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVF S
Sbjct: 302 ATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFES 361
Query: 382 MDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEG 441
MDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHLGLVEEG
Sbjct: 362 MDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG 421
Query: 442 ISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACR 501
SYFNSMV++YSITPQIEHYGCMVDLFGRAGLLDRAI+FV+RMPMEADAVIWAA+LGACR
Sbjct: 422 TSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAALLGACR 481
Query: 502 IYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGC 561
IYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTG KKLPGC
Sbjct: 482 IYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGCKKLPGC 541
Query: 562 SLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQGS 614
SLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSFGYEPNI+ELQQ S
Sbjct: 542 SLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYEPNIMELQQAS 593
BLAST of Clc08G04870 vs. ExPASy TrEMBL
Match:
A0A5D3BGP3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00310 PE=4 SV=1)
HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 538/590 (91.19%), Postives = 564/590 (95.59%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
HP +LEEHFISLL+SCKTVA+LQKVQAQIITHGFQHN YVA NVV++W GLK+MA+ARH
Sbjct: 2 HPRWVLEEHFISLLRSCKTVAVLQKVQAQIITHGFQHNGYVATNVVTTWVGLKQMAHARH 61
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGA 141
LFDHF DPKV LWNA FRGYFH AFYREV+FLFGKMKSM VRPNCFTFPLVLKSCAK GA
Sbjct: 62 LFDHFVDPKVELWNAIFRGYFHKAFYREVVFLFGKMKSMGVRPNCFTFPLVLKSCAKIGA 121
Query: 142 FLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISG 201
F+EGEEIHCEVIKGGFEGNQFVATTLIDVYS RAIGSAYKVFV MLERNIVAWTSMISG
Sbjct: 122 FVEGEEIHCEVIKGGFEGNQFVATTLIDVYSAGRAIGSAYKVFVGMLERNIVAWTSMISG 181
Query: 202 YILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTML 261
YILCN VA ARRLFDLAPERDVVLWNIMVSGYI+IGD++AARKLFDTMPYRDTMSWNTML
Sbjct: 182 YILCNGVALARRLFDLAPERDVVLWNIMVSGYIQIGDMKAARKLFDTMPYRDTMSWNTML 241
Query: 262 NGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPND 321
NGYANNGD+EACEQLFEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDGLVVPND
Sbjct: 242 NGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGRFFEVLRCFKRMLIDGLVVPND 301
Query: 322 ATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGS 381
ATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCGVIENAMEVF S
Sbjct: 302 ATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGVIENAMEVFES 361
Query: 382 MDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEG 441
MDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHLGLVEEG
Sbjct: 362 MDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEG 421
Query: 442 ISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACR 501
SYFNSMV++YSI PQIEHYGCMVDLFGRAGLLDRAI+FV+RMPMEADAVIWAA+LGACR
Sbjct: 422 TSYFNSMVNEYSIKPQIEHYGCMVDLFGRAGLLDRAIDFVKRMPMEADAVIWAALLGACR 481
Query: 502 IYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGC 561
IYKN+DLAELALQKLI LEPKN ANYV+LSNIYGDLGRWKDVARLKIL+RDTGSKKLPGC
Sbjct: 482 IYKNLDLAELALQKLILLEPKNTANYVLLSNIYGDLGRWKDVARLKILIRDTGSKKLPGC 541
Query: 562 SLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQ 612
SLIEVNDSVVEFYSLDERHSQS+EIYGVL GLMKLLRSFGYEPNI+ELQQ
Sbjct: 542 SLIEVNDSVVEFYSLDERHSQSQEIYGVLNGLMKLLRSFGYEPNIMELQQ 591
BLAST of Clc08G04870 vs. ExPASy TrEMBL
Match:
A0A0A0KBY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1)
HSP 1 Score: 1047.7 bits (2708), Expect = 1.8e-302
Identity = 502/538 (93.31%), Postives = 520/538 (96.65%), Query Frame = 0
Query: 76 MAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKS 135
MA+ARHLFDHFPDPKV LWNA RGYFHNAFYREV+FLFGKMKSMDVRPNCFTFPLVLKS
Sbjct: 1 MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKS 60
Query: 136 CAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAW 195
CAK GAF+EGEEIHCEVIKGG EGNQFVATTLIDVYSG RAIGSAYK+FV MLERNIVAW
Sbjct: 61 CAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAW 120
Query: 196 TSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTM 255
TSMISGYILCN VA ARRLFDLAPERDVVLWNIMVSGYIEIGD++AARKLFDTMPYRDTM
Sbjct: 121 TSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTM 180
Query: 256 SWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDG 315
SWNTMLNGYANNGD+EACEQLFEEMPERNVFSWNGLIGGYAHNG FFEVLRCFKRMLIDG
Sbjct: 181 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 240
Query: 316 LVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENA 375
LVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALIDMYSKCG+IENA
Sbjct: 241 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 300
Query: 376 MEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHL 435
MEVF SMDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGITFIGVLCSCTHL
Sbjct: 301 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 360
Query: 436 GLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAA 495
GLVEEG SYFNSMV++YSI PQIEHYGCMVDLFGRAGLLDRAIEFV+RMPMEADAVIWAA
Sbjct: 361 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 420
Query: 496 VLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGS 555
+LGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDVARLKILMRDTGS
Sbjct: 421 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 480
Query: 556 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQGS 614
KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPN++EL QGS
Sbjct: 481 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNMMELLQGS 538
BLAST of Clc08G04870 vs. TAIR 10
Match:
AT1G13410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 565.8 bits (1457), Expect = 4.1e-161
Identity = 261/418 (62.44%), Postives = 333/418 (79.67%), Query Frame = 0
Query: 177 IGSAYKVFVEMLERNIVAWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEI 236
I SA KVF EM+E+N+V WTSMI+GY+L D+ ARR FDL+PERD+VLWN M+SGYIE+
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 237 GDVEAARKLFDTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYA 296
G++ AR LFD MP RD MSWNT+L GYAN GD+EACE++F++MPERNVFSWNGLI GYA
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 297 HNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGF-KGN 356
NG EVL FKRM+ +G VVPNDAT+ VLSACA+LGA D GKWVH Y T+G+ K +
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 357 VYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKI 416
V V NALIDMY KCG IE AMEVF + +DLI+WN++I GLA HG G +AL LFH+MK
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Query: 417 TGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLD 476
+G PD +TF+GVLC+C H+GLVE+G++YFNSM D+SI P+IEH GC+VDL RAG L
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 477 RAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYG 536
+A+EF+ +MP++ADAVIWA +LGA ++YK +D+ E+AL++LI+LEP+NPAN+VMLSNIYG
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
Query: 537 DLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 594
D GR+ D ARLK+ MRDTG KK G S IE +D +V+FYS E+H +++E+ +L+ L
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
BLAST of Clc08G04870 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 469.9 bits (1208), Expect = 3.1e-132
Identity = 245/639 (38.34%), Postives = 372/639 (58.22%), Query Frame = 0
Query: 17 DSVQKHPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSW---AGL 76
DS++ HP +SLL +CKT+ L+ + AQ+I G + Y ++
Sbjct: 29 DSIRNHPS-------LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHF 88
Query: 77 KRMAYARHLFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVL 136
+ + YA +F +P + +WN FRG+ ++ + L+ M S+ + PN +TFP VL
Sbjct: 89 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 148
Query: 137 KSCAKNGAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIV 196
KSCAK+ AF EG++IH V+K G + + +V T+LI +Y + A+KVF + R++V
Sbjct: 149 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 208
Query: 197 AWTSMISGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTM---- 256
++T++I GY + +A++LFD P +DVV WN M+SGY E G+ + A +LF M
Sbjct: 209 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 268
Query: 257 --PYRDTM--------------------SW-------------NTMLNGYANNGDIEACE 316
P TM W N +++ Y+ G++E
Sbjct: 269 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 328
Query: 317 QLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARL 376
LFE +P ++V SWN LIGGY H + E L F+ ML G PND T++++L ACA L
Sbjct: 329 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHL 388
Query: 377 GALDLGKWVHVY--AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNS 436
GA+D+G+W+HVY G + +LIDMY+KCG IE A +VF S+ K L +WN+
Sbjct: 389 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 448
Query: 437 VICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDY 496
+I G A HG + LF +M+ G +PD ITF+G+L +C+H G+++ G F +M DY
Sbjct: 449 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 508
Query: 497 SITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELA 556
+TP++EHYGCM+DL G +GL A E + M ME D VIW ++L AC+++ N++L E
Sbjct: 509 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 568
Query: 557 LQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVE 612
+ LI++EP+NP +YV+LSNIY GRW +VA+ + L+ D G KK+PGCS IE++ V E
Sbjct: 569 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 628
BLAST of Clc08G04870 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 451.1 bits (1159), Expect = 1.5e-126
Identity = 231/625 (36.96%), Postives = 356/625 (56.96%), Query Frame = 0
Query: 32 ISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNV-----VSSWAGLKRMAYARHLFDHF 91
ISL++ C ++ L++ +I G + Y A + +SS+A L+ YAR +FD
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLE---YARKVFDEI 93
Query: 92 PDPKVALWNATFRGYFHNAFYREVIFLFGKMKS-MDVRPNCFTFPLVLKSCAKNGAFLEG 151
P P WN R Y I+ F M S PN +TFP ++K+ A+ + G
Sbjct: 94 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 153
Query: 152 EEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMISGYILC 211
+ +H +K + FVA +LI Y + SA KVF + E+++V+W SMI+G++
Sbjct: 154 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 213
Query: 212 NDVAHARRLFDLAPERDV---------------------------------------VLW 271
A LF DV L
Sbjct: 214 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 273
Query: 272 NIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLNGYANNGDIEACEQLFEEMPERNVF 331
N M+ Y + G +E A++LFD M +D ++W TML+GYA + D EA ++ MP++++
Sbjct: 274 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 333
Query: 332 SWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVY 391
+WN LI Y NG E L F + + + N TLV+ LSACA++GAL+LG+W+H Y
Sbjct: 334 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 393
Query: 392 AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADA 451
G + N +V +ALI MYSKCG +E + EVF S++ +D+ W+++I GLA HG G +A
Sbjct: 394 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 453
Query: 452 LTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVD 511
+ +F++M+ KP+G+TF V C+C+H GLV+E S F+ M +Y I P+ +HY C+VD
Sbjct: 454 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 513
Query: 512 LFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPAN 571
+ GR+G L++A++F+ MP+ +W A+LGAC+I+ N++LAE+A +L++LEP+N
Sbjct: 514 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 573
Query: 572 YVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEI 612
+V+LSNIY LG+W++V+ L+ MR TG KK PGCS IE++ + EF S D H S+++
Sbjct: 574 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 633
BLAST of Clc08G04870 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 449.5 bits (1155), Expect = 4.3e-126
Identity = 220/575 (38.26%), Postives = 344/575 (59.83%), Query Frame = 0
Query: 25 RLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARHLFD 84
R+ EE L K C + ++++ AQII + ++AP ++S+ + ++ A +F+
Sbjct: 17 RIFEERLQDLPK-CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFN 76
Query: 85 HFPDPKVALWNATFRGYFHNAFYREVIFLFGKMKSMDVRPNCFTFPLVLKSCAKNGAFLE 144
+P V L N+ R + N+ + F+F +M+ + + FT+P +LK+C+
Sbjct: 77 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 136
Query: 145 GEEIHCEVIKGGFEGNQFVATTLIDVYS--GARAIGSAYKVFVEMLERNIVAWTSMISGY 204
+ +H + K G + +V LID YS G + A K+F +M ER+ V+W SM+ G
Sbjct: 137 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 196
Query: 205 ILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNTMLN 264
+ ++ ARRLFD P+RD++ WN M+ GY ++ A +LF+ MP R+T+SW+TM+
Sbjct: 197 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVM 256
Query: 265 GYANNGDIEACEQLFEEM--PERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPN 324
GY+ GD+E +F++M P +NV +W +I GYA G E R +M+ GL +
Sbjct: 257 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-D 316
Query: 325 DATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFG 384
A ++++L+AC G L LG +H N YV NAL+DMY+KCG ++ A +VF
Sbjct: 317 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 376
Query: 385 SMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEE 444
+ KDL++WN+++ GL HG G +A+ LF +M+ G +PD +TFI VLCSC H GL++E
Sbjct: 377 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 436
Query: 445 GISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGAC 504
GI YF SM Y + PQ+EHYGC+VDL GR G L AI+ V+ MPME + VIW A+LGAC
Sbjct: 437 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 496
Query: 505 RIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPG 564
R++ +D+A+ L L++L+P +P NY +LSNIY W+ VA ++ M+ G +K G
Sbjct: 497 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 556
Query: 565 CSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMK 596
S +E+ D + EF D+ H +S +IY +L L++
Sbjct: 557 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
BLAST of Clc08G04870 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 415.2 bits (1066), Expect = 8.9e-116
Identity = 213/572 (37.24%), Postives = 333/572 (58.22%), Query Frame = 0
Query: 22 HPHRLLEEHFISLLKSCKTVALLQKVQAQIITHGFQHNEYVAPNVVSSWAGLKRMAYARH 81
H R +E +FI L+ K+ +K+ A II HG + ++ +V ++ M YA
Sbjct: 4 HGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 82 LFDHFPDPKVALWNATFRGYFHNAFYREVIFLFGKM--KSMDVRPNCFTFPLVLKSCAKN 141
LF+ +P V L+N+ R Y HN+ Y +VI ++ ++ KS ++ P+ FTFP + KSCA
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASL 123
Query: 142 GAFLEGEEIHCEVIKGGFEGNQFVATTLIDVYSGARAIGSAYKVFVEMLERNIVAWTSMI 201
G+ G+++H + K G
Sbjct: 124 GSCYLGKQVHGHLCKFG------------------------------------------- 183
Query: 202 SGYILCNDVAHARRLFDLAPERDVVLWNIMVSGYIEIGDVEAARKLFDTMPYRDTMSWNT 261
P VV N ++ Y++ D+ A K+FD M RD +SWN+
Sbjct: 184 -------------------PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 243
Query: 262 MLNGYANNGDIEACEQLFEEMPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVP 321
+L+GYA G ++ + LF M ++ + SW +I GY G + E + F+ M + G + P
Sbjct: 244 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEP 303
Query: 322 NDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVF 381
++ +L++VL +CA+LG+L+LGKW+H+YA GF V NALI+MYSKCGVI A+++F
Sbjct: 304 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 363
Query: 382 GSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVE 441
G M+ KD+I+W+++I G A HG+ A+ F++M+ KP+GITF+G+L +C+H+G+ +
Sbjct: 364 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 423
Query: 442 EGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGA 501
EG+ YF+ M DY I P+IEHYGC++D+ RAG L+RA+E + MPM+ D+ IW ++L +
Sbjct: 424 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 483
Query: 502 CRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLP 561
CR N+D+A +A+ L++LEP++ NYV+L+NIY DLG+W+DV+RL+ ++R+ KK P
Sbjct: 484 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 511
Query: 562 GCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 592
G SLIEVN+ V EF S D EI VL+
Sbjct: 544 GGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022139698.1 | 0.0e+00 | 90.38 | pentatricopeptide repeat-containing protein At3g29230-like [Momordica charantia] | [more] |
KAG6579204.1 | 0.0e+00 | 90.76 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_016901901.1 | 0.0e+00 | 91.39 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
TYJ97821.1 | 0.0e+00 | 91.19 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
KAG7016718.1 | 0.0e+00 | 91.75 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 4.3e-131 | 38.34 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 2.1e-125 | 36.96 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LS72 | 6.0e-125 | 38.26 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 1.3e-114 | 37.24 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q1PEU4 | 2.8e-114 | 39.49 | Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CGA7 | 0.0e+00 | 90.38 | pentatricopeptide repeat-containing protein At3g29230-like OS=Momordica charanti... | [more] |
A0A5A7V6Y9 | 0.0e+00 | 91.39 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E0Z4 | 0.0e+00 | 91.39 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A5D3BGP3 | 0.0e+00 | 91.19 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0KBY4 | 1.8e-302 | 93.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G13410.1 | 4.1e-161 | 62.44 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 3.1e-132 | 38.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.5e-126 | 36.96 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 4.3e-126 | 38.26 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 8.9e-116 | 37.24 | mitochondrial editing factor 21 | [more] |