Clc08G03190 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTCCAACAACATTCACCTCTTGAACTTGAACCATGGAATGACTTGAATGGCAAAGTGGTGATGGTGACTGGAGCCTCTGCAGGGCTCGGCCGTGAGTTCTGTCTGGATCTTGCTAGAGCTGGATGCAAAATCATTGCTGCAGCACGCCGAGTTGATAGACTCCAATCTCTTTGCGACGAACTTAATCAACTCAATTATTCAGTCATGTCATCGACATTCGCCTCCCCAATCTCCCCAATGGCGGCGATACAGAGCCACCGAGCCGTGGCTGTGGAGCTTGATGTTTCTGCCAATGAAAAGAGTATTGAGGAGAAAGTAAGAAAAGCTTGGGATTCGTTTGGATTCATTGACACCTTGGTTAACAATGCTGGTTTAAGAGGTAAATCGATTATGATTTTATCATGTTGGATTTAAGAGCATTTATTTTGAAATGAAGAAGGGAACGTGAGATTTTATACATCTTAAAATGTTTATGGCTTAGTTTTGATGACAATTTAAAATTTGATCGAATTTATTTTTCAATTGAATTTAATTAGTAATGTTTTTTATATGAAGTCAAGTAATTAATTAAGTTGAGGGCAAATTACATTTTTGTCCCTCAAGTTTTGAGTTAGTGTTTATTTGGTCTATGAAGTTTGAAAAGCTATATTTTGGTTTGAGAGGTTTAGAAATTAGTTCTGCATGGTCCATAAGTTAATTTGACGGAAAGTTGACTAACGAAAATTTAACATGACAAGTTAAGGTGGCATATTGTAAGTGAGGTGGACAACTTTTCTAACTCCATATTACTTTTAAGATTACATTGTTATCCAACTCCTTCCTCCTCATCTTCTCCACTGGTTATGATCTCTCTCCTCTCCTTCCTTTTCACTTATTTCTCCCTTGACAAAAATACCTTTCGAAAACTCATCTTTCAAATTTTAAATTTGGAGATAACAATGCTACCTCAAATCAGCAAAAATAAGTTTATAGATTCTCAAAACTCTATTTTTACATGATTCAATATTTCTCTTCCGAATAATGAAATCCTTTAATTTCCATTTTTCTTATGATTCAAGTTACTAGATTTTAGTTTATTGGATTGAGTTATTCAAGTCTAAAAATTAACTCTAAAAGTCAAAATAAAATAACAATTACTTTATTGAATAAATAATTTGTTTACAAAACACAAACTATCAGTTTAGGGCAAAAATTCCAACATAATCTATCTGTAAGAGAAACCTTTTTGAAAATAGAATGAAATTAAGAATTTTGGGGTTTTGAAAATGAAATTTGGGCTTAACAATAACACAAAATGATTTGCAATTTTATTTATCTTATGAAATGCTGTGTATAATTTCTATGAAAATTAATATTGAAAAATTGGAAAAATAATATAGGAAAAAAAATACAAAAACAAAATTGAAAAAAAAAAAAAATCAAAAGATAGAAAAGATAAAACGAATAGTTAAAATTAAGTTACCTATTGTAAAAAAATTACCATTTTTTTCTTTTATGTTATTATGTTTGTCGGAGAAGTATAAAATTGAAAAAGAAAAAATAAATAGATCAATAAAAAAAATCAAATAGTGCAAATAGAATTGTTTTCATACTATTCTTTCGCTTTCTCATCTCTCCACAATTTCATGTTTTTCATCTCTCCTCCCTCTACTCATATCATGCCCCTTGGTAAGAGATAATTTGTTGAAACAAAATCTAAAAAAATGAAATGACAAAAATAACTAAACGAAAGTACTATTTTCAAATATAACTTTGAACTTCGTATTTGTATTAATTTCAGTGTTGTGAGTATAATCTCTAATATTTGATCCTTTGATTCTTTCTCTCAAAGAAAAGTAAACATGTGCAACTTGAATTCTTGAGATATTCTATGAAACTTTGCTCTCAAGGTCTTCAACTCTAGAGTCTTCAATTCTTCAAGTCTCTAGAACTTTAATATTTTTGGATCGAGACTTGAACTTTAGTAGTTTTGGATCCTCGATCTTTAGCTTCTTTGGAATTTCAGGGGCTTCAATCTTCAGAACTTGTGAGCTTGGGAGCTTCGGTCTTTAGATCTTGAGCTTCAGTCTTCAATTCTTCAGAATCCAGATTTCCAGAGCTTCAGCACTTTTCTTTACTCTTCAAAAAGAAACCCCCTCTTGCATGAAGAAGAAAACCCTCAATTTATAGGGGTTTTTTTTATTTGGGCTTGGGCCAATCTTGTTCTTGGGCCATGGGCTTAAGCCAATTTGCTTTTGGGCCATTGGGCTTGGGCCCGACTTTCTCTTTAGTTTGGACTAAAGTTGGATTTGGGCCCAATACTTTCTTTGGCCCAAAAAAAAATGTTCAAAATTTCTTCTCCAACAATAGCAATATATCATTGTCTATCAGTAATATACAATGATAGATATCTATCAAGGTCTATCATTCATACATATAGTGATGGATGATAATAGTCTATCATTATCTATTATTGATAGACATTTTGCTATATTTGAAAAATTTTGAAGCAATTTTGACATTTGAAACATTTATATTAAACGAAAAGGTCAATAGACATTGAAAAATAAAAATAAAAGGCAAAATGCATAAAAGATTCTCTCCCTAGCACATTTTAGATATAATATAAATTATTAGTATTTTGTTTTTTTTAATATTGTATCTTTTTTAAATTTATTACTGGGTTGTTTTAAAACTTATTATTGAAATATTGTCGTAGTATGCATTTTTGTCTCTGAAAAACACTCATTTTCATCTTTTAAGAGACAAGAATGATTTAAAAATAAAACAAAATTTAAAAAAAAAAAAAAAAAAAAGAAAAAAAGGAAGAAAAAAAAAAGAAGAAAGAGCCAGCCGGAGCATCACTTAGACTCTTACAGCAACTAAGATGCAAAATAATGTCAAATTTTGTACGCATGGCTAGTGTGGGCCAAAGGGAATAAATGGAGATAAGACCTTAATGTTCGAGGAAAATATAAAAAAGTTGCCGTGGTTGCATAAATGACAATTGCAAATATAGCACAAAAGATAGGCCTAAATATTAGATAATACTAAAAAGCCCATCGATTTTTGCGTGCTTTCTTCTTCCTATTTTTTTCAATTTGAAAGCTATCGCCAATAGATTCTATTAGCGGCTGTCAGTGATAGCTTCCATCAGTGGCTGTCCCATCACTGGTTTGGATATTGATACTAATTATCGATAATGATACTAATATGGATATGAGTATGAATCTTGAGAGAAAGGGTAACTGATGGAAAGTTACTAAAATAGATAGTGTGAATCTCATGTAATAATCAAAGGCTAATATTGAAGACCTATTTGGGGGATGAGATAATAAACCGATATTACGGATTTAGGAGTGGGGCCCACCATTCATTACGATTACAAGGTAATTGTAAACAAAAACAAATGTAATTAATTGAGTCCCACTTCTCTTATGATTAACATTGATTGATGACGTTTACATAGAAGTAAACATGACCTCAATAGTAAAAAAATGTGTGGCATTTTGAAAATTGAGGACCAAGTAAAAAATGTAAACTCAAAACTTAGGAATGGAAGTGTAACATTTTGAAACTTAGAGATCAAATAGAAACTAACTTCATAGCTAGAAACCAAACATGTATTAATTTTCTCAATATTTTTCATTACCATATTCTTTTTCATATGACATTGGTTAAAGGGAGTGTAAAGTCTCCACTTGAATTGAGTGAGAAAGAATGGGATCATACGATGGGAACAAATCTTAAAGGACCATGGTTGGTATCAAAGTATGTATGCATACTCATGCACAAAGCCAATCGAGGTGGATCTATTATCAATATTTCTTCCATTAGTGGTGTCAATAGAGCACTACAAACTGGAGCTCTTGCTTATATTACTTCAAAGGCTGCCTTAAACACTTTGACAAAGGTAAACTTTCTTGTTATGTACACAATTTTTTGGCTTGTAGCTTTAATTAATTATGCATGAGATCAATCCAAGCTTTGTACATATATGTGTATGTCTATTTTGCATATAAATCTCGTAAGTCAATAGTCACAAAATAATATCAGTCTATATATATAACATGTATTTAATTTATCATTTTTATTTTTTATTTGATAAAATTATTATTATTATTATTATTATTATTATTTTATCTTTAAAATTTGAGTTTAGTAGCATTTTATCGTTAAGAACCTGAGATAGGGAGAGGAGGAGGTTGGAGAAAGTTCTTTTTTTAAAAAAAGTGGCAACTAACGATGTGAGGTATGTGGCAGTAGAGAAGTTTGGAAGGAAAGAAGACGGATGTGAAGAAAGAAAAATAACAGAGAAAAGAAAAGTCACACTGTGAGGAGGAATTAAAATGCAATTTGAAATTTCAAAGACCAAAAGTGTAGATTTCTTTTTCTTGACAATATGTGAGATGATGGAATCGAAACTCTAAACTCTAAAAAAAATACATGTTTGCCTCTAATTTCTATTTGATTCTTAGCTTTCAAATCATTATACTTTTAGTCATACAGTTTTGAGTTTGATTTTAATCTAGTCCTTACGTTTTAAAATATTTGAAACTTGAGTTTTGTTTCAATTTGGTTCATAAATTTTAAGGTTTACACTTTTAACCTCGATTTTATTTATTGTAACAGGTTATGGCGATGGAATTAGGAGCACAAAATATTAGATTCAATTGTATATGTCCTGGACTATTCAAATCTGAGATTACAAAAGATCTGATGGAAAAAGATTGGATTGAAAATGTAGCAATGAGAATGATCCCTTTAAAAACATTCGGAACTTCAGATCCAGCGTTAACAACAACCGTTCGATACTTGGTGCATGACTCTTCTAAATATGTATCGGGTAACATTTTTATTGTTGATGCGGGCAACACTTTAACTGGTCTCCCAATCTTCTCATCTCTTTGA ATGGCAGTCCAACAACATTCACCTCTTGAACTTGAACCATGGAATGACTTGAATGGCAAAGTGGTGATGGTGACTGGAGCCTCTGCAGGGCTCGGCCGTGAGTTCTGTCTGGATCTTGCTAGAGCTGGATGCAAAATCATTGCTGCAGCACGCCGAGTTGATAGACTCCAATCTCTTTGCGACGAACTTAATCAACTCAATTATTCAGTCATGTCATCGACATTCGCCTCCCCAATCTCCCCAATGGCGGCGATACAGAGCCACCGAGCCGTGGCTGTGGAGCTTGATGTTTCTGCCAATGAAAAGAGTATTGAGGAGAAAGTAAGAAAAGCTTGGGATTCGTTTGGATTCATTGACACCTTGGTTAACAATGCTGGTTTAAGAGGGAGTGTAAAGTCTCCACTTGAATTGAGTGAGAAAGAATGGGATCATACGATGGGAACAAATCTTAAAGGACCATGGTTGGTATCAAAGTATGTATGCATACTCATGCACAAAGCCAATCGAGGTGGATCTATTATCAATATTTCTTCCATTAGTGGTGTCAATAGAGCACTACAAACTGGAGCTCTTGCTTATATTACTTCAAAGGCTGCCTTAAACACTTTGACAAAGGTTATGGCGATGGAATTAGGAGCACAAAATATTAGATTCAATTGTATATGTCCTGGACTATTCAAATCTGAGATTACAAAAGATCTGATGGAAAAAGATTGGATTGAAAATGTAGCAATGAGAATGATCCCTTTAAAAACATTCGGAACTTCAGATCCAGCGTTAACAACAACCGTTCGATACTTGGTGCATGACTCTTCTAAATATGTATCGGGTAACATTTTTATTGTTGATGCGGGCAACACTTTAACTGGTCTCCCAATCTTCTCATCTCTTTGA ATGGCAGTCCAACAACATTCACCTCTTGAACTTGAACCATGGAATGACTTGAATGGCAAAGTGGTGATGGTGACTGGAGCCTCTGCAGGGCTCGGCCGTGAGTTCTGTCTGGATCTTGCTAGAGCTGGATGCAAAATCATTGCTGCAGCACGCCGAGTTGATAGACTCCAATCTCTTTGCGACGAACTTAATCAACTCAATTATTCAGTCATGTCATCGACATTCGCCTCCCCAATCTCCCCAATGGCGGCGATACAGAGCCACCGAGCCGTGGCTGTGGAGCTTGATGTTTCTGCCAATGAAAAGAGTATTGAGGAGAAAGTAAGAAAAGCTTGGGATTCGTTTGGATTCATTGACACCTTGGTTAACAATGCTGGTTTAAGAGGGAGTGTAAAGTCTCCACTTGAATTGAGTGAGAAAGAATGGGATCATACGATGGGAACAAATCTTAAAGGACCATGGTTGGTATCAAAGTATGTATGCATACTCATGCACAAAGCCAATCGAGGTGGATCTATTATCAATATTTCTTCCATTAGTGGTGTCAATAGAGCACTACAAACTGGAGCTCTTGCTTATATTACTTCAAAGGCTGCCTTAAACACTTTGACAAAGGTTATGGCGATGGAATTAGGAGCACAAAATATTAGATTCAATTGTATATGTCCTGGACTATTCAAATCTGAGATTACAAAAGATCTGATGGAAAAAGATTGGATTGAAAATGTAGCAATGAGAATGATCCCTTTAAAAACATTCGGAACTTCAGATCCAGCGTTAACAACAACCGTTCGATACTTGGTGCATGACTCTTCTAAATATGTATCGGGTAACATTTTTATTGTTGATGCGGGCAACACTTTAACTGGTCTCCCAATCTTCTCATCTCTTTGA MAVQQHSPLELEPWNDLNGKVVMVTGASAGLGREFCLDLARAGCKIIAAARRVDRLQSLCDELNQLNYSVMSSTFASPISPMAAIQSHRAVAVELDVSANEKSIEEKVRKAWDSFGFIDTLVNNAGLRGSVKSPLELSEKEWDHTMGTNLKGPWLVSKYVCILMHKANRGGSIINISSISGVNRALQTGALAYITSKAALNTLTKVMAMELGAQNIRFNCICPGLFKSEITKDLMEKDWIENVAMRMIPLKTFGTSDPALTTTVRYLVHDSSKYVSGNIFIVDAGNTLTGLPIFSSL Homology
BLAST of Clc08G03190 vs. NCBI nr
Match: XP_011653852.2 (uncharacterized protein LOC101207345 [Cucumis sativus] >KAE8649670.1 hypothetical protein Csa_011948 [Cucumis sativus]) HSP 1 Score: 512.3 bits (1318), Expect = 2.8e-141 Identity = 255/297 (85.86%), Postives = 276/297 (92.93%), Query Frame = 0
BLAST of Clc08G03190 vs. NCBI nr
Match: XP_038883585.1 (3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Benincasa hispida]) HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-140 Identity = 252/297 (84.85%), Postives = 272/297 (91.58%), Query Frame = 0
BLAST of Clc08G03190 vs. NCBI nr
Match: XP_031740575.1 (uncharacterized protein LOC101207105 [Cucumis sativus] >KAE8649668.1 hypothetical protein Csa_012368 [Cucumis sativus]) HSP 1 Score: 497.7 bits (1280), Expect = 7.1e-137 Identity = 249/297 (83.84%), Postives = 269/297 (90.57%), Query Frame = 0
BLAST of Clc08G03190 vs. NCBI nr
Match: XP_016901826.1 (PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like isoform X2 [Cucumis melo]) HSP 1 Score: 465.3 bits (1196), Expect = 3.9e-127 Identity = 234/281 (83.27%), Postives = 253/281 (90.04%), Query Frame = 0
BLAST of Clc08G03190 vs. NCBI nr
Match: XP_008455802.2 (PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like isoform X1 [Cucumis melo]) HSP 1 Score: 464.2 bits (1193), Expect = 8.7e-127 Identity = 233/276 (84.42%), Postives = 251/276 (90.94%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy Swiss-Prot
Match: Q9X248 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=fabG PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27 Identity = 88/269 (32.71%), Postives = 133/269 (49.44%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy Swiss-Prot
Match: Q21929 (L-xylulose reductase OS=Caenorhabditis elegans OX=6239 GN=dhs-21 PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25 Identity = 84/270 (31.11%), Postives = 139/270 (51.48%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy Swiss-Prot
Match: Q5HPW0 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=fabG PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25 Identity = 81/267 (30.34%), Postives = 134/267 (50.19%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy Swiss-Prot
Match: Q8CPI3 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=fabG PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25 Identity = 81/267 (30.34%), Postives = 134/267 (50.19%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy Swiss-Prot
Match: P28643 (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata OX=3930 GN=CLKR27 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24 Identity = 81/268 (30.22%), Postives = 131/268 (48.88%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy TrEMBL
Match: A0A0A0L258 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427280 PE=3 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136 Identity = 248/297 (83.50%), Postives = 269/297 (90.57%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy TrEMBL
Match: A0A1S4E0S1 (3-oxoacyl-[acyl-carrier-protein] reductase FabG-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495898 PE=3 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127 Identity = 234/281 (83.27%), Postives = 253/281 (90.04%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy TrEMBL
Match: A0A1S3C2F6 (3-oxoacyl-[acyl-carrier-protein] reductase FabG-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495898 PE=3 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 4.2e-127 Identity = 233/276 (84.42%), Postives = 251/276 (90.94%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy TrEMBL
Match: A0A1S4E0Q8 (3-oxoacyl-[acyl-carrier-protein] reductase FabG-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495898 PE=3 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 4.2e-127 Identity = 233/276 (84.42%), Postives = 251/276 (90.94%), Query Frame = 0
BLAST of Clc08G03190 vs. ExPASy TrEMBL
Match: A0A6J1DNW4 (uncharacterized protein LOC111021766 OS=Momordica charantia OX=3673 GN=LOC111021766 PE=3 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112 Identity = 211/297 (71.04%), Postives = 249/297 (83.84%), Query Frame = 0
BLAST of Clc08G03190 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 337.8 bits (865), Expect = 8.8e-93 Identity = 170/287 (59.23%), Postives = 217/287 (75.61%), Query Frame = 0
BLAST of Clc08G03190 vs. TAIR 10
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 337.8 bits (865), Expect = 8.8e-93 Identity = 169/288 (58.68%), Postives = 218/288 (75.69%), Query Frame = 0
BLAST of Clc08G03190 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 337.8 bits (865), Expect = 8.8e-93 Identity = 170/287 (59.23%), Postives = 217/287 (75.61%), Query Frame = 0
BLAST of Clc08G03190 vs. TAIR 10
Match: AT1G63380.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 329.3 bits (843), Expect = 3.1e-90 Identity = 162/288 (56.25%), Postives = 213/288 (73.96%), Query Frame = 0
BLAST of Clc08G03190 vs. TAIR 10
Match: AT1G62610.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 326.6 bits (836), Expect = 2.0e-89 Identity = 161/288 (55.90%), Postives = 212/288 (73.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|