Clc08G03150 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G03150
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein LURP-one-related 7
LocationClcChr08: 7327778 .. 7337940 (-)
RNA-Seq ExpressionClc08G03150
SyntenyClc08G03150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATTCTTCAGCTCTTCCGATTCCCGTTGATCTTTTCCTATCCAAAGAACATCCCGACTACCTCCCTAATTCCTCCGGTGATATCATCTACAGACTCACTCGTCATTCTTTGAAATCGTCGTCAGTTGACAAGATTGTATTGCTTGACGCCGCCGCCGCCGATCCTCTCATTTCCATTTATCGCGTTAACGTGAGTATCTATGTTCGTTTCAACTTTCACTGCCATACCTTTGTTCAGTATTCTGCTTCTAAGTTCCTAAATCATGTGGGGAACAAGTCGGGGGCCTCCAATTCTTGAAACCCGACTGTTATTTGATTAATATTGCTTCGATCGCATCAACAAATAGTGAAAATATGTGCATTTTTCTTTTTCTACTGCGCTAAGCCTTCAGGAGTTAGATATTTTAAATTAATATGAAGTAATTGGATAATTCCAGTTCGTATGACCTAATAACTTTGGTGTTTAGGTCATGCAATTTGTTTACCGACCTCTTCTTCCACAGCTTTTGTCCCTTATGTGCTTTCTAGTTGTTTGTGATTTTAGGATTGTTATTGTTGAGGCTTGTTAAGTGGTGTTATGAAAGAAAAGAAATCGACAAGCAAAAAACATGAACATTAAAGAACAGTATAGAGATTTACGTAGTTCACCAATGGAGTGTTACGTACGTCCACAGACAAAGGGAGAGCTATACCCACGGACAGAGGGAGAGAGTACTTTTATTATTAGAGGGAAAAATCAGATAATATGGAGGTGCCAATGGAATTAGAGGGCTTATATAACATCTCTGTAAATCCTGACCAGATAGTAAGACCTGGAGTTGGTCGTCCAAAGCGCAAGATAATAGATTTGAGGCATTCCAACATTAAGATTACTTTGCACTAGGTCATTAGCCTTACAAATTAACTCTCTCTAAACTTTTAAGGCTTCTAGAACAAACAAATGAGTAAACAATATTCTTGAAATCGTTGCAAATTAGTTTTATGATAGAATTGTTAAGAAGCAGGGTAGCTTATAAATTATGAGATGTACTTCTCAGAAATCTAAAGTGATTCTTGTGTTAGACTTCCTTTTTGTTGTTTTCCTGAAATAATGTGAACAGATTTCATTGGTCTCAGAAAGAAACTTGGCAAGGATTCAAAGGGGATGTTAGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAAATTAGAAGAACTGAGTTCAAAGTGTTCCTTGCCGGTGAAAGTTTAGACGACTCAAATGCGAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGGTACAGTATAACAATAACATATGGAAGAATGTTTTTATGAGGCTGTTCATTTCAACCCTTAAGCATGCTGTTTGTTCTAACTTCCAAAGAGTTATAATTGAGTAGAGGAGAAGGGCCTAGCTCATACATCATTTTAATTTTGATTTCATATCCAACTTAGTGTTTACTTATTCACCATTGCCATCAAATTAGCTGTGGCAATTCAACAAAGCTTCCAACCCCTTCATGTGTCTTAAAAAAATATGTGCAACTTATGCAAAATGAAAGTCTTATGAATGATGAAATCTGTATATAAACCATCAATATCCTTCCTGAGTCTATGTTAGTGTAACGCCCTAGGCTTGGCACTTGATGGCTCCAATATTTCTTTGCATCCCTTGCGACTTAGCACTTGTTCTTGCTCGTCTCTCGAAGAGTTTTTGAGGGTGAGCCCCACAAACCAAGACGGGTCTTTTCAGCATGATTTGTCCTCACTCACATGCTTCCTGGGAAAATTCCCAAGAGATCAACCAACATAGGATTATTCAAAGCTAAACATGCTTAACTTTGGAGTTGCTATGAAGGAGCAAGCTTAAAGGAAGGATGCACCTTGTTGGTATAGGTAGTAGCTACAAATTCTTTTAAGCCTTTCTTAACCATACTTTCATATCTTTAGGATCCTTCTCATTCCGATGTGATCTCGATTCATTCATGTACCCCTCTTAAACTTGGGCATTATAGTTAGTGTCTTTGCATTTTCATTTGTACAATGCATTATTTATTCCATTTTAAGAGTTGCAATGATTACTGCCTTTTTTTTTTAATTTTTTTTTAAATTTTTTTATTTTTATGCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTAGTTCTGTCGATCCAGCATTGATTGTAGCTTTGGTTGTAATATTCTTTGATGGACGAATGTAACAAAACTAGGCAAAATATTACAAAGTTGTTAATCTGCATGTTGTTTGATGGATCTGATCCAACTGAATAATGAAAAAGGAGAATGAATGCAAGAAGAAAGGGTAATTAGAATCACCGTCTACACTTTTCATTTGGTAGTTGATAAAGAATGGCTTTTAATAATAATAATAATAATAATAATAAAATCTCTATTAGCGTTAGCAAAGTTGTAACTATACGGTGTCATGTGTCAAGCTTTAATATAGTGAATTGAGTTTTGGGTATCGTCTTCAAGATTGAGTTTTTAGTTTGAATAAGTACCATTTTTACTAATACCTTATTTTATGTAGATAACCTAACAAATATGTTGGTTCTAACTTAACTCCTCATACTTCTAACTAAATGGAGACAACAGTTATACAAGATGCCTTAGGAAAGCGATTTTTGGGCATTAAACAATAAACTTTGTCAATTCAATAGACTACTTTTATCATGCCATAAACATAAGTCAAGAAAATACTATTTTTTATTGACTTCCTCTCCCAAGCTTAGCTAAATCTTTTTTTAGTTTGTAAAATCAATCTCCAGTCTATTTTCTACAAACAAGCATGACATGAATGGACCTTTTGTTAACTACAAAAAAATATGCTTTATCTTTTTCGCCTATTACTAACGAGTAAACTGTTATTGTTTGTCACTACATGAACTCACTTTAGTTGCAGGGAAATCCATCCCTATGCAAGATTTTACTAACAATCATACTGTTGTTGTTTTAGTCTAAATTATACTCTCTCAAGCTAAAACTTAAATCAAGTAAACAAATATTTAATTAAGAGACCAAGATCATTAAGCATACAAATAGATGAATGAATTGTTGTGATATAGAAGCCTCTTCATTGAATCAAGGACAAGAAAAACATCCAAGCATTACAATGAAATTCTAAGATAACCAAGTTCGGATTAAGTATCGTTTTAGAAAATGCTTGTAAAAGTAGAGCTATTTCTTGTCTTATTCAATTCGGTCTATCCAAGAGACTGAATACTTAGTTTATTATTATTATTATTATTATTATTTTAAATTATTTATTATTTCATTCGTTTTTTCAACCATACACCTTTTTCTACAACTAATTAACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCTTTCCATCTTTGCTATTTTAATTTTCTTTTTCACATTTGATAAATTTTTTATTTTAGAATTTTTTCATCTTTTATACATCTTTTGCTTTATATATTTTTAATTCTTTTAACCAAATTATACATATATATATATAAGTTTCAAAACTTATAAAGAAAATAGTGTTGTTTAAAGTAACGGTTAGTTATTAAATCAACAAATTCTTTCTTTGAAAAAATACATAATATTTTCCAAAAACCAAATTATAGAATTTGTTTATTCAAAAAAAAAAAAAAACTCAATAAATATATAAAAGAATAGGAAGTAACGGTTATTTTACCACTCATTTTACTACAGTAAAATTTACAACCAATTGATTAAAACTTAAAAACAAAATTTCTCCTTCCCTCCAATATTTCAAGGCCCTATTTTTTAAAAATAGTTTGCAAATCACCTTATTTTTACAAATATTTTCTAAAAATACCCTGAGATGCAACTTAACCCAATTTTATGTGTGAGCTTTTTATTTCCTTTCATTTATTTCTTTCCTTTTTAATACCTAATATTTTTCAAAGTATTACAACAACACCTATATATTGTTCTTTTTCTTTTGGTTTAAATAATCGTAACCAATTGTTAAAATATGATTTAATTACGAATTTGGTCCAATGATTTTGGACAAGTTAGAAATTAGTCTTTATAATTTTAAAAGTTAGAATTTTAATGTTTATAGTTTGATAAAACTTCATAAATATTTCTTATGGTTTGATAAAATTAAAGTATAAATTTTAACTTTTATGAGGATTTTATTAAACCATATGAACTAAATTTTAATTGTAAATTGCAAGAACTAAATTAAATTTTAACTTTCACCAAACTATAGGGATGAAATTTGCAATTCAATCTTAAAATATCTGTTGACATGTGGATATATCTATAAATTGAAAGGACTATTTATGAGGATTTCAATAAATCATAGGGACTAGATTTTAATTATACATCATAGAGTTTAATAAAATCCTCATAAAAGTTAAAAATTTATAATTATAATTTTATCAAATCATAAATAAAATTTATGAGGTTTTATCAAACCATAAGGATTAAAGCTCTAACTTTTTCATGGGATCAAATTTTTAATTAAAACATATTTTAATAATTAGTTACAATCAATTAAACTCAAAGAAAAAGAAAAATAGGCATTGCTATAGTAGTTTGAAAAATGTTAATTAGTAAAAAGAAAAGCAATAAGTAATTTGAAAAAAAAAAGACATAAAATTTTTGGATGGTAAGTGAAGTTCAGTCTTTTATAAAGACTGAATTCGAAAAAATAAAGAAAAAAAAATCACAAACAATTTGATTTGGGCAGTAAAAAAGTAGAGTTCAGTCTTTCCGAAAGAGTGAAACTAATAAAGTCAAGGAATCAACACTAAGGACTCTATTTTTATACTTAATCCAACCAAGTTCTGTCACTCAATATCACCATACAAAACAATAACTCATCTAAAAGGAATCCAACAAAACACTACTATACTAAAAAGGGAAAAAAAAAAAAAAAAAAAGACTCTAAACAACATGTGCCACACTCGTTTCCAACAAGAAGTCAAGATCTCGAGCCTTGAATTCCTTTCTTCCGTCTCCGAAAATGCTCCTTGTGCCTCAAAATTGAGTAGAAATTGAATTTGGACTTCTTCCTCTCCAATTTGCCTCCTCAAATTCGACTAAAAAAGAAGCTTATATACAAAAACACTGTAACTACCATCTGGACACTCTTGTCTACAAAATTACAAAAATGCCATCTTCAATTTCCATTTATCTCCATAGCGTCGACACACCTATGGCAGCATCTTGACACTGCTGTCTCAAGTAATATGAATTTTTTAGCGTATAGACGCCATAAGTGACTGAAAAACACTAAAAAAAAGGCTTTCTTAAGCTTAGAATTTAGTTAGTTTTATTAGTTAAATGATGGTTTTATTTGTCAAGAATTTGGACAAGAATGATCTAATTGAGAAGAAATGACGTGGGAAAGAGCCTTAGGGAGGTCGTAGTTGATCTAAGGCATGTTAAGAAAGAAAAAGATGAAAAAAAAGGTGCCCAAGAAGCGTTGCAACACTCTAGACCCAATAGCACAAAACATGGCAGCATTGCAATGCTATACCCTAGTGTTGTGATATTACGACAATCAATGCTGAGGGCCATGCTAGGTAGTGTCTTAAGGCTACTTACCAACATTGTGACGCTATTGACGAACCAACTATTTAATTCCCACTTTGTTTAGAGTTTTGGGGGTTGTTTAACTTGAATTTTTGGAAGCTGAGAGAGAGGAGAACTCATATTTTTGGAGAGATGGAGGGGTGAGATTGTGATGGAGGATTCTCGAGAGCTTAAATGCAAGGATCAAGAGCTTGGGACATGATTTTGTTTCGGTGACATAATTAGATCATCGACCAATCTTTTGAGCTTTTCTTTAGTTCTTTAAAATTGTGGAATTTTATGAATTCTATGTTGATTTTGTATTTTGAGATCTGAGTTGCTAAATGCTTTAGTTCTAGAGTTTGATTGAGCTTTTAGATTGATGTTGTAGAACTATTGTGATTATGAATTGGTTATTTATTGATTATCTTTTAGCAACGCATGTTTTTAAAGCTTTCAATAGTTGATTAGTATTGTTTGATGTATGATCTATTGTCTTGCTCTAGTGAGAATAGTTTAGATTAGATCTTGCTTGCTAAATTGTCGTTTGAACATACTAGTGTAATAGGAGAACGATAGAGATTAATGATCAAGGATTGTAGTGCCATGTTCGTTTAACGAGTTCCAAGAGATTTAGGAGCCAGTAGTTAAGTAGGAGAAAAGGTTAACCTCAAGAGGGGCATATCGGTAATTGATAATAATTGATAAAAGACTTCGAGATAGAGATAATTGATAATAATTAATTTAGAACTTGATAGGTAAAGTTGAACAGTCCTTTAGCGAAATCAGTACTCTAGGATACCTTTTTGCTTACTTTCTTCCATAACTATTTGTTCTTTTTTTTTTCTTCTTGTTTTAGTTTAAGTTCAAAACCTTCATGGTTGGGTCCCTAGATAAAACTAAAAATATATATATATTTTTTATAATAGTTCGATGATTCAAATACTTGATTCCTTGAGGATGATACTTGGTCTAGAGTCGTTTTATACTTTGTTACATCTTGACGCGTGTGCATTTGCACTTATCATGTTTTTTCGGCATTGTTGCTAGAGATTCGATGCCTTTAAATTCTTCTAATATTGAGAATTTTCTATGATTTTAATATAGTGTGTATTGTTTTTGTTTTTGTTTAGTACATGCAATAGATTCATTGGTTTGGCCGTCTTTCTTTTGTTCAAGAGATTGATCGTACGTTCATAAGAAATCTTAGGGGAAGCTTAAGGGTCGGGTTCAATACCATGGGTCAACCACCTATGGAACCAAGGATGATCAAAGACTATTTCTAGCCAACTATTTAGTTTGCTTAGTTTGGGATCACACATGTACCCATTGATTAATGTTAATAATTTTGTGTTCAAGCATGGTCTCATCTAGATGGCGAGAAGCTGTGCATTTAGAGGGAGTCTAGCTGAGGATCCTTACAGGACACATTCATTGAATTTTTGAGATTAGTGGCATGGTAAAAAATGTGTCTGTTGATGCTATTCACTTATGTATGTTTCCTTTTTCTATACAGAAGAAGGCCAAGTATTGGATTGAGTTGATCTTGCTAGCCAACATCACCACCTGGGATGGGCTAGCTTAGATGTTCGGGAACAAAATTTTCCCACCAACTAGGATGACGAAGCTAAAAATGGAGAGTGACACCTTTAAGTAAAATGAAGGTGAGCAACTGTTCAAAGCATAGTTAGAGTGTAAGAAACTCTTGCGAAGTATCCACAACATGGATACTCGAACTAGTTACAAATCCAATGTTTTACAATGGATTGTCCAACACAACAAAGTCCATCTTGGATGCAACTACAAGAGGATTCATTTTCTCCAAGATAGCTAAGGTAGCCACAACATTGCTAGAGGACATGGGCACTACAAGTTACAATTGGCATTTAGATAGAGCTACTACCAAAGCAATGGGTTTATATGAATTGGATGATGTAAATGCATTAAAGGCTGAAATGGCTACGTTGACCGAGAATAAACTTATGGTGTTAGGTAAGCCCTAATCGATTGCATCGATGTCGACATGTAGTTTGTACACGATAGTAGAGGTTTCTTATGTGCAGTTGGCTAACAATGTCAATATGCACCAAGGCAGCTATCATGGGAACCCAGCTTAGTTCTAGTTCTCTTAGTTCCTTGCGCCTCATACTCAACTACCTACACATTATCACCCATGTTTTAATTTTCATGAAAATTTCTCTTATGCTAACATCGAGAATGTTTTATAGGCTCCTCCAATCTTTGCATCAACATCCCTACCTCCGACAGAGAAGAAGGCTTTGATTTTACGAGTTAAGAGTGATTTCATAAAGAAGTTCAGGAGGAAAAAAATACAATTGGAAAGCACAGTGGCCAGTAATGGAAATTCTATTCAAAATATCGAGGAGATGAACCAGATTACCATTGTGGTCAATAGCAAGTAGAAGGGAAGTGTTCAAGCTGCTATGATGGGAGATCCTAGGAGCAATGTAAGGTAGTGACTCTTGGGAGTGATAGACCATTAGTAGAGCCTATGGTGAATGTGGAGCTTGTGCAGGATGAGTTGGATCTTGGAAGTGGGAGAAACATAAAGGAGAAGAGAAGAATGAAGACGAAGAAAAAGAAAAAGAGAATGATGAGAAGGAGATAGTTAATGAAAGAAAGAGGCATGCACCTGCATTGTCATCTTAAAGGAAGTTGTAAAACCCAAAAACCTAAACTAACCTCCTCATAAAAGGTGAAAAGAGATGTGTGGATTTTGGGAGGAATGGAAGAAACTTCTATATGAAAAATTAACACAAGCCTGTGGAGTTAGGAAAAATTTGAGAAGAGTAAGACTTCTAGGCTTGTAGAGTTTGGGAATTTTTGGAGGTTTAAAGCACACTATACGTTAACCTCACTTTGGGGGGGGGGGGGGGGGGGGGAGGGGATAAATGTTTGTCCAAAATTGAGTTTTGAAGAGAGAATTGGTCATAGAAGTGTTTGGGAGAAAACTATGCTATGAGATTTTTCTTAAAGCTTTTGGACTACGCGTTGAGAATGGGAAGCAAGTATGCTTTGAAAGGAGAAACTTTGAGGTGAACTTCGAGTTGAACTCATAAGATTAAAGATTGAGAAATTTGACCAAGTGTTGGAAGAAAAGTTGGAAACGTAGGACCAAGTTCAACTTATCTACCTTTGAGCCAAGGTTGAAACGCATGTCCTGGGAAGATGATAAGTGTTGGATGCATGGTGAGATGCATGGTCCATGTCTCGGAAAGCTTTTGGCTAAGTGTTGGGCAACTTATGATAGTTGAAAAGTGTCACTTAGGCCAAAGGGTGAAGGTTGGGCACAAAGCTTGTAAGTTAGTTGGATTTTAACTAAGTGTTGGGCAATTCATGATAGTTGGAAGGTAACACTAAAGCCAAAGCAAGGAAGTTGGACACATGGCTTGGCTAGAGACAAGATTTTGGTTAAGTGTTAAGCAACCTATCTTTGTTAAAGGAAAAAAACTTAGGATAAAGATCAAATATAAAAAGTTGGACGCATGATGTGACTAACAAGGTAAAAATATGGCTAATTACAAGAGGTCTTAAACACATGGTAGTGAGGAACTAGGGGAGTTGGATGCATACTTTAAATTGAGGGGAAATTTGGTTAAGTGTTGAATGGTTCTTATTGGTTAAAAGGCAGCAAAAGGAAACATACCTGAATTAAGCACAAGTTGGCCGCATAGCTAGGGTAGTTGGATGCATGGTTGAGATAACCGAGCCTAATTGAACGCATGGTAGGCGTTCAAGAACGGGGAAAATAAGTAGGAGGTGACTAGCTCTGAGTTTGAACACATCAAGAGGTGAAGTGTCAACATGCATGAATAGGTTATGCATGATGAAGCCACATAAGAAGTTAAGTGTCAAGCTTAGGAGAATTCTTGGATGACAAGGACAATCTTTTCAAGCCTATAGATAGAACTTGAAACATTGGGAATTCATACAATTCACTTTCAAACGAAAGTTCATCAAGAGAGAAAGAACTTGAGGGAAGAAAAACTTTGCTCGAGGAAGGAAAAAGGGGAACTAGGCGTCCAACACATAAAGTAGACGTCTAAGAGAGTTGTCAGGCGTCCAACTCAAGCAGTCTAGGCGTCCAAGAAGGTAGTCTAGGCGTCCAACATAGTCTCCCAAGCATTCCAAGTGTTGCCAGGTGTCCAAACTATGTACAAGGCATCCCGAAGAGCAATTCCAGGCATTTAAAGGAGGTTTTGGGCGTCCAACTTGCTGTTTTAAGGTTTGTTGTGTGTCTTTTGGATCATAAACTTAGTCGTGTTCTCAAGGGTGAAGGATAAGCTAAGTTTTTGGAAGGACAAAGAGTTCGGAACAAGGTTAAGAGGATTTTAAGGCCAAAACCCTAATCTACGGTGAGTGGTTTCTCTTCTAAGAGTTAATTTTATTTTTCCTTACATTGTATGTTGTTATGTTGTAAGACAAGGGAAGCCCCACAGAATGGAAGAAGGATCTAAAGATCTAGAATCCGAGCTTGTGGCGAAATTTCATGGGATGGTCAGAGGGTTACCGTAA

mRNA sequence

ATGGCAAATTCTTCAGCTCTTCCGATTCCCGTTGATCTTTTCCTATCCAAAGAACATCCCGACTACCTCCCTAATTCCTCCGGTGATATCATCTACAGACTCACTCGTCATTCTTTGAAATCGTCGTCAGTTGACAAGATTGTATTGCTTGACGCCGCCGCCGCCGATCCTCTCATTTCCATTTATCGCGTTAACAAAGAAACTTGGCAAGGATTCAAAGGGGATGTTAGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAAATTAGAAGAACTGAGTTCAAAGTGTTCCTTGCCGGTGAAAGTTTAGACGACTCAAATGCGAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTAGTTCTGTCGATCCAGCATTGATTGTAGCTTTGGTTGTAATATTCTTTGATGGACGAATTCTAGGCGTCCAAGAAGGTAGTCTAGGCGTCCAACATAGTCTCCCAAGCATTCCAAGTGTTGCCAGGTGTCCAAACTATGTACAAGGCATCCCGAAGAGCAATTCCAGGCATTTAAAGGAGGTTTTGGGCGTCCAACTTGCTGTTTTAAGACAAGGGAAGCCCCACAGAATGGAAGAAGGATCTAAAGATCTAGAATCCGAGCTTGTGGCGAAATTTCATGGGATGGTCAGAGGGTTACCGTAA

Coding sequence (CDS)

ATGGCAAATTCTTCAGCTCTTCCGATTCCCGTTGATCTTTTCCTATCCAAAGAACATCCCGACTACCTCCCTAATTCCTCCGGTGATATCATCTACAGACTCACTCGTCATTCTTTGAAATCGTCGTCAGTTGACAAGATTGTATTGCTTGACGCCGCCGCCGCCGATCCTCTCATTTCCATTTATCGCGTTAACAAAGAAACTTGGCAAGGATTCAAAGGGGATGTTAGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAAATTAGAAGAACTGAGTTCAAAGTGTTCCTTGCCGGTGAAAGTTTAGACGACTCAAATGCGAGCTTGGAGATGAAAGGCTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACAAGCCTGATGCACAAGCTTCATCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATTTTTCCTAGTTCTGTCGATCCAGCATTGATTGTAGCTTTGGTTGTAATATTCTTTGATGGACGAATTCTAGGCGTCCAAGAAGGTAGTCTAGGCGTCCAACATAGTCTCCCAAGCATTCCAAGTGTTGCCAGGTGTCCAAACTATGTACAAGGCATCCCGAAGAGCAATTCCAGGCATTTAAAGGAGGTTTTGGGCGTCCAACTTGCTGTTTTAAGACAAGGGAAGCCCCACAGAATGGAAGAAGGATCTAAAGATCTAGAATCCGAGCTTGTGGCGAAATTTCATGGGATGGTCAGAGGGTTACCGTAA

Protein sequence

MANSSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYRVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRILGVQEGSLGVQHSLPSIPSVARCPNYVQGIPKSNSRHLKEVLGVQLAVLRQGKPHRMEEGSKDLESELVAKFHGMVRGLP
Homology
BLAST of Clc08G03150 vs. NCBI nr
Match: XP_038884438.1 (protein LURP-one-related 7 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-85
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYR 63
           S+ALPI VDLFLSKEHPDYL NSSGDIIYR+ R SLKSSSVDKIVLLDAAAADPLISI+R
Sbjct: 11  SAALPIAVDLFLSKEHPDYLTNSSGDIIYRINRPSLKSSSVDKIVLLDAAAADPLISIFR 70

Query: 64  VNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 123
           VNKE+WQGFKGDV EEDLLFKVQRTLNK++RTEFKVFL GESLDDSNASLEMKGWPFQRS
Sbjct: 71  VNKESWQGFKGDVGEEDLLFKVQRTLNKLKRTEFKVFLVGESLDDSNASLEMKGWPFQRS 130

Query: 124 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPS VDPALIVALVVIFFDGR+
Sbjct: 131 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSPVDPALIVALVVIFFDGRM 185

BLAST of Clc08G03150 vs. NCBI nr
Match: XP_004139831.1 (protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical protein Csa_016427 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-80
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYR 63
           S ALPIP+DLFLSK+HPDYL NSSGDIIYR+ RH+LKSSSVDKI+L  A AADPLISI+R
Sbjct: 11  SPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHADAADPLISIFR 70

Query: 64  VNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 123
           VNKE+W+GFKGDV EE+LLFKVQRTLNK+RRTEFKVFL G +LDDSNAS EMKGWPFQRS
Sbjct: 71  VNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQRS 130

Query: 124 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           CT+Y GNTIVAQTSLMHKL QIWVRRGRFRLTIFPSSVDPALIVAL+VIFFDGR+
Sbjct: 131 CTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Clc08G03150 vs. NCBI nr
Match: XP_008463053.1 (PREDICTED: protein LURP-one-related 7 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 1.7e-78
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYR 63
           S+ALPIP+DLFLSKEHP YL NSSGDIIY++ RH+ KSSSVDKI+L  A AADPLISI+R
Sbjct: 11  SAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHADAADPLISIFR 70

Query: 64  VNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 123
           VNKE+W+GFKGDV EE+LLFKVQRTLNK RRTEF VFL G +LDD N S EMKGWPFQRS
Sbjct: 71  VNKESWEGFKGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDPNTSFEMKGWPFQRS 130

Query: 124 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           CT+Y GNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVAL+VIFFDGR+
Sbjct: 131 CTVYSGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Clc08G03150 vs. NCBI nr
Match: XP_022154859.1 (protein LURP-one-related 7 [Momordica charantia])

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-76
Identity = 146/176 (82.95%), Postives = 163/176 (92.61%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLD-AAAADPLISIY 63
           S+ALPIPVDLFLS +HPDYL NSSGDII+RL+R S KS S+DKI+LLD AAAADPLISI+
Sbjct: 12  SAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAADPLISIH 71

Query: 64  RVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQR 123
           R +KE+W GFKGDV EE+LLFKV R++NK+ RTEFKVFL GE+LDDSNASLEMKGWPFQR
Sbjct: 72  RHSKESWHGFKGDVGEENLLFKVHRSINKLTRTEFKVFLHGENLDDSNASLEMKGWPFQR 131

Query: 124 SCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           SCTIYKGNTIVAQTSLMHKL+Q+WVRRGRFRLTIFP SVDPALIVALVVIFFDGR+
Sbjct: 132 SCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 187

BLAST of Clc08G03150 vs. NCBI nr
Match: XP_022948358.1 (protein LURP-one-related 7 [Cucurbita moschata])

HSP 1 Score: 295.0 bits (754), Expect = 6.1e-76
Identity = 149/186 (80.11%), Postives = 167/186 (89.78%), Query Frame = 0

Query: 1   MANSS-------ALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLD-A 60
           MANSS       +LPIPVDLFLSK+HPD++  SSGD I+RL+R SLKSSS+DKIVL D A
Sbjct: 1   MANSSDPAICAASLPIPVDLFLSKKHPDHVTTSSGDFIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 61  AAADPLISIYRVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNAS 120
           AAA PLISI+RVNKE+WQGFKGD+ E+DLLFKV+RTLNK+RRTEFKVFL GE+ DDSNAS
Sbjct: 61  AAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNAS 120

Query: 121 LEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVI 179
           LEMKG+PFQRSCTIYKGNTIVAQTSLMHKLHQI VRRGRFRLTIFP +VDP+LIVAL+VI
Sbjct: 121 LEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVI 180

BLAST of Clc08G03150 vs. ExPASy Swiss-Prot
Match: Q8GWL2 (Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 82/173 (47.40%), Postives = 112/173 (64.74%), Query Frame = 0

Query: 9   IPVDLFLSKEHPDYLPNSSGDIIYRLTRHS----LKSSSVDKIVLLDAAAADPLISIYRV 68
           IPVDLF SK+ P     SSGD+ +  +       L+ SS     LLD++   PL SI R+
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV-PLFSISRL 77

Query: 69  NKETWQGFKGDVSE-EDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 128
           +   W+  KGDV + +DL+  V+RT  +  +TE +V  AGE    S+ +L +KG PFQ+S
Sbjct: 78  HNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGE----SSENLVIKGVPFQKS 137

Query: 129 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDG 177
           CTIY  ++IVAQTSLM+KL QI+V R +FRLTIFP S+D +L+VA+V IF  G
Sbjct: 138 CTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

BLAST of Clc08G03150 vs. ExPASy TrEMBL
Match: A0A0A0K429 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 8.9e-81
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYR 63
           S ALPIP+DLFLSK+HPDYL NSSGDIIYR+ RH+LKSSSVDKI+L  A AADPLISI+R
Sbjct: 11  SPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHADAADPLISIFR 70

Query: 64  VNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 123
           VNKE+W+GFKGDV EE+LLFKVQRTLNK+RRTEFKVFL G +LDDSNAS EMKGWPFQRS
Sbjct: 71  VNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQRS 130

Query: 124 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           CT+Y GNTIVAQTSLMHKL QIWVRRGRFRLTIFPSSVDPALIVAL+VIFFDGR+
Sbjct: 131 CTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Clc08G03150 vs. ExPASy TrEMBL
Match: A0A1S3CIB3 (protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.3e-79
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLDAAAADPLISIYR 63
           S+ALPIP+DLFLSKEHP YL NSSGDIIY++ RH+ KSSSVDKI+L  A AADPLISI+R
Sbjct: 11  SAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHADAADPLISIFR 70

Query: 64  VNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 123
           VNKE+W+GFKGDV EE+LLFKVQRTLNK RRTEF VFL G +LDD N S EMKGWPFQRS
Sbjct: 71  VNKESWEGFKGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDPNTSFEMKGWPFQRS 130

Query: 124 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           CT+Y GNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVAL+VIFFDGR+
Sbjct: 131 CTVYSGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM 185

BLAST of Clc08G03150 vs. ExPASy TrEMBL
Match: A0A6J1DNI1 (protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 5.9e-77
Identity = 146/176 (82.95%), Postives = 163/176 (92.61%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLD-AAAADPLISIY 63
           S+ALPIPVDLFLS +HPDYL NSSGDII+RL+R S KS S+DKI+LLD AAAADPLISI+
Sbjct: 12  SAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAADPLISIH 71

Query: 64  RVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQR 123
           R +KE+W GFKGDV EE+LLFKV R++NK+ RTEFKVFL GE+LDDSNASLEMKGWPFQR
Sbjct: 72  RHSKESWHGFKGDVGEENLLFKVHRSINKLTRTEFKVFLHGENLDDSNASLEMKGWPFQR 131

Query: 124 SCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           SCTIYKGNTIVAQTSLMHKL+Q+WVRRGRFRLTIFP SVDPALIVALVVIFFDGR+
Sbjct: 132 SCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM 187

BLAST of Clc08G03150 vs. ExPASy TrEMBL
Match: A0A6J1G943 (protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.9e-76
Identity = 149/186 (80.11%), Postives = 167/186 (89.78%), Query Frame = 0

Query: 1   MANSS-------ALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLD-A 60
           MANSS       +LPIPVDLFLSK+HPD++  SSGD I+RL+R SLKSSS+DKIVL D A
Sbjct: 1   MANSSDPAICAASLPIPVDLFLSKKHPDHVTTSSGDFIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 61  AAADPLISIYRVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNAS 120
           AAA PLISI+RVNKE+WQGFKGD+ E+DLLFKV+RTLNK+RRTEFKVFL GE+ DDSNAS
Sbjct: 61  AAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNAS 120

Query: 121 LEMKGWPFQRSCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVI 179
           LEMKG+PFQRSCTIYKGNTIVAQTSLMHKLHQI VRRGRFRLTIFP +VDP+LIVAL+VI
Sbjct: 121 LEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVI 180

BLAST of Clc08G03150 vs. ExPASy TrEMBL
Match: A0A6J1KES0 (protein LURP-one-related 7 OS=Cucurbita maxima OX=3661 GN=LOC111493191 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.6e-74
Identity = 143/177 (80.79%), Postives = 163/177 (92.09%), Query Frame = 0

Query: 4   SSALPIPVDLFLSKEHPDYLPNSSGDIIYRLTRHSLKSSSVDKIVLLD--AAAADPLISI 63
           ++ LPIPVDLFLSK+HPD++ +SSGDII+RL+R  LKSSS+DKIVL D  AAAA PLISI
Sbjct: 11  AAPLPIPVDLFLSKKHPDHVTSSSGDIIFRLSRQYLKSSSIDKIVLHDAAAAAAGPLISI 70

Query: 64  YRVNKETWQGFKGDVSEEDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQ 123
           +RVNKE+WQGFKGD+ E+D LFKVQRTLNK+RRTEFKVFL GE+ D+SNASLEMKG+PFQ
Sbjct: 71  HRVNKESWQGFKGDIGEQDSLFKVQRTLNKLRRTEFKVFLVGENSDESNASLEMKGFPFQ 130

Query: 124 RSCTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDGRI 179
           RSCTIYKGNTIVAQTSLMHKLHQI VRRGRFRLTIFP +VDP+LIVAL+VIFFDGRI
Sbjct: 131 RSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI 187

BLAST of Clc08G03150 vs. TAIR 10
Match: AT2G30270.1 (Protein of unknown function (DUF567) )

HSP 1 Score: 135.2 bits (339), Expect = 7.5e-32
Identity = 82/173 (47.40%), Postives = 112/173 (64.74%), Query Frame = 0

Query: 9   IPVDLFLSKEHPDYLPNSSGDIIYRLTRHS----LKSSSVDKIVLLDAAAADPLISIYRV 68
           IPVDLF SK+ P     SSGD+ +  +       L+ SS     LLD++   PL SI R+
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV-PLFSISRL 77

Query: 69  NKETWQGFKGDVSE-EDLLFKVQRTLNKIRRTEFKVFLAGESLDDSNASLEMKGWPFQRS 128
           +   W+  KGDV + +DL+  V+RT  +  +TE +V  AGE    S+ +L +KG PFQ+S
Sbjct: 78  HNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGE----SSENLVIKGVPFQKS 137

Query: 129 CTIYKGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALVVIFFDG 177
           CTIY  ++IVAQTSLM+KL QI+V R +FRLTIFP S+D +L+VA+V IF  G
Sbjct: 138 CTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884438.11.9e-8592.00protein LURP-one-related 7 [Benincasa hispida][more]
XP_004139831.11.8e-8085.14protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical protein Cs... [more]
XP_008463053.11.7e-7882.86PREDICTED: protein LURP-one-related 7 [Cucumis melo][more]
XP_022154859.11.2e-7682.95protein LURP-one-related 7 [Momordica charantia][more]
XP_022948358.16.1e-7680.11protein LURP-one-related 7 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q8GWL21.1e-3047.40Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0K4298.9e-8185.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=3 SV=1[more]
A0A1S3CIB38.3e-7982.86protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=3 SV=1[more]
A0A6J1DNI15.9e-7782.95protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 S... [more]
A0A6J1G9432.9e-7680.11protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV... [more]
A0A6J1KES01.6e-7480.79protein LURP-one-related 7 OS=Cucurbita maxima OX=3661 GN=LOC111493191 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G30270.17.5e-3247.40Protein of unknown function (DUF567) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007612LURP-one-relatedPFAMPF04525LORcoord: 25..172
e-value: 3.2E-19
score: 69.3
IPR007612LURP-one-relatedPANTHERPTHR31087FAMILY NOT NAMEDcoord: 3..175
IPR038595LURP-one-related superfamilyGENE3D2.40.160.200coord: 7..177
e-value: 5.3E-31
score: 109.6
NoneNo IPR availablePANTHERPTHR31087:SF85PROTEIN LURP-ONE-RELATED 7coord: 3..175
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 24..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G03150.2Clc08G03150.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane