Clc08G02330 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G02330
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr08: 4440718 .. 4441650 (+)
RNA-Seq Expression	Clc08G02330
Synteny	Clc08G02330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAAAGGTTGCTACGAACAGTACCCATCTGCCAAAAACATTCATGCAACAGCTCCCACTAATTTCACGAGAAAGGGAGAAAAACACAAAAATTATTCGTAATTCAAACAATTACTTGATTACAACTTCCTTCATTCGCCATTAGATCGGTGCAGGAAGGGGCAATCCGTAACCTCGTAGTGGTGGAATCCGATGGAGTTTCAAATCTGTAACAAGCGTTGGGAGAACAACTGTGATTAATCCAGCAGAAGGTAGGAGCGTACACGGCGATTCCAATGGTGCGGCCGATCGAATCCTGAACATCGACGGCGTTGGTCAAGACGAGACACAGGACAGCCTCTTCCAAGGCGTTTCCATGGGAAATATCGGCAGAGTTATTCCTTCTGCAAGCGGCTATGGCGGCGGCCCCTTCCCGAAGCTTGAGGAAGACCTCGGAATGGTCTTGGGGGATCATCAATTTGTGTCGATTGGTGAGAAGGCCAAAGATGCGTTCGGGAGGAGCGGAGTGGGAGGCGGAGGGATGGGAGAGGAGGAGGTGGAGGAGGCGGAGGGAGGCGCGGAGGTCGGAGGTGTCGGAGGAGGGGAAAGGAAGGGCGGAGAAGAAGGCGGTGGTGAGGGGATCAGAATGGGAAATGGAGCATTTGAGGGAGCAGTAGTGGAGGAGATTGGAGTGAGAAATTGGGGGGTTTGGGAGAGGGGAGAAGCAGGAGGAGCAGTGAGTGAGGAGGAAGGAATCATGGAGAGCGGCGGCGAGGGGAAACAATGGCGGAGTAATGTCTTCCGCCATTTCTATGTCTTCCATTGCTCTCATTTCCATCTCCATTTCTGTGTCTCTCCTGGGCTCCTCCAACGCCTAGTGGTAACTGGTAAGGTAACAATAACATGTGGGATGAAATAAAACCAAGTCTATCATATACCATTTAACCTTCTTCA

mRNA sequence

CCGAAAGGTTGCTACGAACAGTACCCATCTGCCAAAAACATTCATGCAACAGCTCCCACTAATTTCACGAGAAAGGGAGAAAAACACAAAAATTATTCGTAATTCAAACAATTACTTGATTACAACTTCCTTCATTCGCCATTAGATCGGTGCAGGAAGGGGCAATCCGTAACCTCGTAGTGGTGGAATCCGATGGAGTTTCAAATCTGTAACAAGCGTTGGGAGAACAACTGTGATTAATCCAGCAGAAGGTAGGAGCGTACACGGCGATTCCAATGGTGCGGCCGATCGAATCCTGAACATCGACGGCGTTGGTCAAGACGAGACACAGGACAGCCTCTTCCAAGGCGTTTCCATGGGAAATATCGGCAGAGTTATTCCTTCTGCAAGCGGCTATGGCGGCGGCCCCTTCCCGAAGCTTGAGGAAGACCTCGGAATGGTCTTGGGGGATCATCAATTTGTGTCGATTGGTGAGAAGGCCAAAGATGCGTTCGGGAGGAGCGGAGTGGGAGGCGGAGGGATGGGAGAGGAGGAGGTGGAGGAGGCGGAGGGAGGCGCGGAGGTCGGAGGTGTCGGAGGAGGGGAAAGGAAGGGCGGAGAAGAAGGCGGTGGTGAGGGGATCAGAATGGGAAATGGAGCATTTGAGGGAGCAGTAGTGGAGGAGATTGGAGTGAGAAATTGGGGGGTTTGGGAGAGGGGAGAAGCAGGAGGAGCAGTGAGTGAGGAGGAAGGAATCATGGAGAGCGGCGGCGAGGGGAAACAATGGCGGAGTAATGTCTTCCGCCATTTCTATGTCTTCCATTGCTCTCATTTCCATCTCCATTTCTGTGTCTCTCCTGGGCTCCTCCAACGCCTAGTGGTAACTGGTAAGGTAACAATAACATGTGGGATGAAATAAAACCAAGTCTATCATATACCATTTAACCTTCTTCA

Coding sequence (CDS)

ATGGGAAATATCGGCAGAGTTATTCCTTCTGCAAGCGGCTATGGCGGCGGCCCCTTCCCGAAGCTTGAGGAAGACCTCGGAATGGTCTTGGGGGATCATCAATTTGTGTCGATTGGTGAGAAGGCCAAAGATGCGTTCGGGAGGAGCGGAGTGGGAGGCGGAGGGATGGGAGAGGAGGAGGTGGAGGAGGCGGAGGGAGGCGCGGAGGTCGGAGGTGTCGGAGGAGGGGAAAGGAAGGGCGGAGAAGAAGGCGGTGGTGAGGGGATCAGAATGGGAAATGGAGCATTTGAGGGAGCAGTAGTGGAGGAGATTGGAGTGAGAAATTGGGGGGTTTGGGAGAGGGGAGAAGCAGGAGGAGCAGTGAGTGAGGAGGAAGGAATCATGGAGAGCGGCGGCGAGGGGAAACAATGGCGGAGTAATGTCTTCCGCCATTTCTATGTCTTCCATTGCTCTCATTTCCATCTCCATTTCTGTGTCTCTCCTGGGCTCCTCCAACGCCTAGTGGTAACTGGTAAGGTAACAATAACATGTGGGATGAAATAA

Protein sequence

MGNIGRVIPSASGYGGGPFPKLEEDLGMVLGDHQFVSIGEKAKDAFGRSGVGGGGMGEEEVEEAEGGAEVGGVGGGERKGGEEGGGEGIRMGNGAFEGAVVEEIGVRNWGVWERGEAGGAVSEEEGIMESGGEGKQWRSNVFRHFYVFHCSHFHLHFCVSPGLLQRLVVTGKVTITCGMK

Homology

The following BLAST results are available for this feature:

BLAST of Clc08G02330 vs.


Match Name	E-value	Identity	Description

BLAST of Clc08G02330 vs.


Match Name	E-value	Identity	Description

BLAST of Clc08G02330 vs.


Match Name	E-value	Identity	Description

BLAST of Clc08G02330 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G02330.1	Clc08G02330.1	mRNA