Clc08G00010 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G00010
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DNA glycosylase
Location	ClcChr08: 61045 .. 62751 (-)
RNA-Seq Expression	Clc08G00010
Synteny	Clc08G00010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCAATCACGCATGCAATTTCAAAATTACAGAGATATGAAGAAGAAGATGATGAAAAGACGATGAGGTACGTGGTTGGGTCATGGTGACCTTACATCCTCTTTCAAGCTTTCTACGCTTTCCTTTTAGAAGAATTATACATTACCATATAAAAGAAGGAAAATAAAGTAATTTTTTTTTTAAAAAAAATAAATAATAAATAAAATGTGAAAAAAAGAAAGAAAGATGAGGATATTAGGGGTGGAAAATAAATGTTTATGGGTTTTGATTAGGGTCCATTATATATAAAAATGAATTTGAATGGTAATAGCCGTTAGGTTTGAAAAAATTAATTAATATAAGTAGAGAGGAGAAGAAAGAAAGAAAAGGAGATAGGGATAGGGAATGAAGATGATTCATTTGAATTTGGGAGTGTGTAGTGATTTCGATCTTGAGAGAGCAGTTTGTAACCATGGGCAGTTTATGATGCCACCAAACCAATGGATTCCTTCTTCTAAAACTCTCCAACGTCCACTTCGACTCTCTAATTCAAACTCTTCTGTATTTGTCTCTATCAACCAAACTTCGTCTTTTCTTCTCACCATTCAAATCCACTCTTCTTCTGCTGCTCTCTCTCCCCAAGATCAACAAACTATATTGGTATGCTGAATTATTACATTATTTTATAATTTTTTAGATTCTAATTAATTAATGAACTCCTACGTATTTATGTAGGATCAAGTGGTTCGGATGCTTAGGCTTACGGAGAAAGATGAGGATGAGTTGAGGAAATTTCAAAGTTTGCATCCCAAAGCCAAACAGATGGGATTTGGTCGGCTTTTTCGGTCTCCCACTGTTTTTGAAGATGCACTCAAGTCCATCCTTCTATGCAATACCACGTAATTAATTAATTGATTAATGAATATATAATAGTATTAGCTACATGAAAATTATATTATTAATATATGCATATGCATGGGGTGAGTTGACAGGTGGAAAAGGACACTGGCAATGGCTGGACAGCTGTGTGAGCTCCAAGCCAGAATGAGCAGCCAAAATAGGAAGAGAAAAAGGAAATTAATTGGGAATTTTCCAAATGCAGAAGAAGTTTGTAGAATGGGCGTTGAATTGTTGAAGAAGCATAACCTTGGTTACAGAGCTGGTTTCATCATTAACTTTGCTCAACGCGTTCAAAATGCCACAATTGATCTCCAAAATCCTAATAATTTCCCTAAAATCAAAGGCTTCGGACCTTTTGCAACCGCTAATCTACTCATGTGCCTCGGATTTTACCGTCAACTTCCTATTGATACTGAAACTATAAGGCACATAAAACAGGTTTCATTTTTTTTACAAAAAATAATTATGTATATTCCTAAATTTAATTCCCTCTTTCATTATAACATTATTAATTATTTGAATTTACAAGGTACATGGAAGACAATTTTGCAACAATAAGACAGTACGGGAAGATGTCAAACAAATTTACGACAAGTATGCTCCATTCCAGTGCTTGGCCTATCGGTACGTCAATCAATTTTCTTTTTCCTTTTTTTTTTTTAAGCCTAAAATATTTGCTTTAAATGCTTTATTTTGGTTTTAAATATTTTTATTTTAATTTCAGGTTGGAGCTTGTGGAATATTACGAGAGCAAATTCGGGAAGCTAAGTGAACTGTGCTCCCTTGATTATCATAAGATCAGTGGCGCCACCCTCAACCTTTGA

mRNA sequence

ATGAAGGCAATCACGCATGCAATTTCAAAATTACAGAGATATGAAGAAGAAGATGATGAAAAGACGATGAGTGATTTCGATCTTGAGAGAGCAGTTTGTAACCATGGGCAGTTTATGATGCCACCAAACCAATGGATTCCTTCTTCTAAAACTCTCCAACGTCCACTTCGACTCTCTAATTCAAACTCTTCTGTATTTGTCTCTATCAACCAAACTTCGTCTTTTCTTCTCACCATTCAAATCCACTCTTCTTCTGCTGCTCTCTCTCCCCAAGATCAACAAACTATATTGGATCAAGTGGTTCGGATGCTTAGGCTTACGGAGAAAGATGAGGATGAGTTGAGGAAATTTCAAAGTTTGCATCCCAAAGCCAAACAGATGGGATTTGGTCGGCTTTTTCGGTCTCCCACTGTTTTTGAAGATGCACTCAAGTCCATCCTTCTATGCAATACCACGTGGAAAAGGACACTGGCAATGGCTGGACAGCTGTGTGAGCTCCAAGCCAGAATGAGCAGCCAAAATAGGAAGAGAAAAAGGAAATTAATTGGGAATTTTCCAAATGCAGAAGAAGTTTGTAGAATGGGCGTTGAATTGTTGAAGAAGCATAACCTTGGTTACAGAGCTGGTTTCATCATTAACTTTGCTCAACGCGTTCAAAATGCCACAATTGATCTCCAAAATCCTAATAATTTCCCTAAAATCAAAGGCTTCGGACCTTTTGCAACCGCTAATCTACTCATGTGCCTCGGATTTTACCGTCAACTTCCTATTGATACTGAAACTATAAGGCACATAAAACAGGTACATGGAAGACAATTTTGCAACAATAAGACAGTACGGGAAGATGTCAAACAAATTTACGACAAGTATGCTCCATTCCAGTGCTTGGCCTATCGGTTGGAGCTTGTGGAATATTACGAGAGCAAATTCGGGAAGCTAAGTGAACTGTGCTCCCTTGATTATCATAAGATCAGTGGCGCCACCCTCAACCTTTGA

Coding sequence (CDS)

ATGAAGGCAATCACGCATGCAATTTCAAAATTACAGAGATATGAAGAAGAAGATGATGAAAAGACGATGAGTGATTTCGATCTTGAGAGAGCAGTTTGTAACCATGGGCAGTTTATGATGCCACCAAACCAATGGATTCCTTCTTCTAAAACTCTCCAACGTCCACTTCGACTCTCTAATTCAAACTCTTCTGTATTTGTCTCTATCAACCAAACTTCGTCTTTTCTTCTCACCATTCAAATCCACTCTTCTTCTGCTGCTCTCTCTCCCCAAGATCAACAAACTATATTGGATCAAGTGGTTCGGATGCTTAGGCTTACGGAGAAAGATGAGGATGAGTTGAGGAAATTTCAAAGTTTGCATCCCAAAGCCAAACAGATGGGATTTGGTCGGCTTTTTCGGTCTCCCACTGTTTTTGAAGATGCACTCAAGTCCATCCTTCTATGCAATACCACGTGGAAAAGGACACTGGCAATGGCTGGACAGCTGTGTGAGCTCCAAGCCAGAATGAGCAGCCAAAATAGGAAGAGAAAAAGGAAATTAATTGGGAATTTTCCAAATGCAGAAGAAGTTTGTAGAATGGGCGTTGAATTGTTGAAGAAGCATAACCTTGGTTACAGAGCTGGTTTCATCATTAACTTTGCTCAACGCGTTCAAAATGCCACAATTGATCTCCAAAATCCTAATAATTTCCCTAAAATCAAAGGCTTCGGACCTTTTGCAACCGCTAATCTACTCATGTGCCTCGGATTTTACCGTCAACTTCCTATTGATACTGAAACTATAAGGCACATAAAACAGGTACATGGAAGACAATTTTGCAACAATAAGACAGTACGGGAAGATGTCAAACAAATTTACGACAAGTATGCTCCATTCCAGTGCTTGGCCTATCGGTTGGAGCTTGTGGAATATTACGAGAGCAAATTCGGGAAGCTAAGTGAACTGTGCTCCCTTGATTATCATAAGATCAGTGGCGCCACCCTCAACCTTTGA

Protein sequence

MKAITHAISKLQRYEEEDDEKTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQIHSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFEDALKSILLCNTTWKRTLAMAGQLCELQARMSSQNRKRKRKLIGNFPNAEEVCRMGVELLKKHNLGYRAGFIINFAQRVQNATIDLQNPNNFPKIKGFGPFATANLLMCLGFYRQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGKLSELCSLDYHKISGATLNL

Homology

[Close]

BLAST of Clc08G00010 vs. NCBI nr
Match: XP_038877617.1 (uncharacterized protein LOC120069874 [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 1.0e-136
Identity = 251/287 (87.46%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 22  TMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQI 81
           ++SDFDLE+AVCNHGQFMMPPNQWIPSSKTLQRPLRLS+S+SSVFVSINQ SS LLTIQI
Sbjct: 11  SVSDFDLEKAVCNHGQFMMPPNQWIPSSKTLQRPLRLSDSHSSVFVSINQPSSSLLTIQI 70

Query: 82  HSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFED 141
           HSSS  LSPQDQQ ILDQVVRMLRLTEKDEDELRKFQSLHP+AKQMGFGRLFRSPT+FED
Sbjct: 71  HSSSTPLSPQDQQAILDQVVRMLRLTEKDEDELRKFQSLHPRAKQMGFGRLFRSPTLFED 130

Query: 142 ALKSILLCNTTWKRTLAMAGQLCELQARMSSQ-NRKRKRKL------IGNFPNAEEVCRM 201
           ALKSILLCNTTWKRTLAMAGQLCELQA+M  Q  RKRKRKL      IGNFPNAEEVCRM
Sbjct: 131 ALKSILLCNTTWKRTLAMAGQLCELQAKMRRQITRKRKRKLGEKEGEIGNFPNAEEVCRM 190

Query: 202 GVELLKKHNLGYRAGFIINFAQRVQNATIDLQNPNNFPKIKGFGPFATANLLMCLGFYRQ 261
           GVELLKKH LGYRA +IINFA+ VQ+  IDLQNPN FPKIKGFGPFATAN+LMCLG YRQ
Sbjct: 191 GVELLKKHCLGYRAAYIINFAKCVQSGKIDLQNPNYFPKIKGFGPFATANVLMCLGLYRQ 250

Query: 262 LPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLE 302
           LPIDTETIRH+KQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAY LE
Sbjct: 251 LPIDTETIRHLKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYWLE 297

[Close]

BLAST of Clc08G00010 vs. NCBI nr
Match: KAG6585875.1 (hypothetical protein SDJN03_18608, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020778.1 hypothetical protein SDJN02_17466, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-124
Identity = 226/319 (70.85%), Postives = 270/319 (84.64%), Query Frame = 0


Query: 23  MSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQIH 82
           +SDF+LE+AVCNHG FMM PNQWIPSSKTLQRPLRLSNS++S+ VSINQ+SS LLT+QIH
Sbjct: 10  VSDFNLEKAVCNHGAFMMAPNQWIPSSKTLQRPLRLSNSDTSLLVSINQSSSSLLTLQIH 69

Query: 83  SSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFEDA 142
            S  +L P+D+  ILDQV RMLRLTEKDEDE+R+FQ+LHP AKQ+GFGR+FRSP++FED 
Sbjct: 70  -SPRSLPPKDEVAILDQVARMLRLTEKDEDEIRRFQNLHPTAKQIGFGRIFRSPSLFEDV 129

Query: 143 LKSILLCNTTWKRTLAMAGQLCELQARMSSQNRKRKRK---LIGNFPNAEEVCRMGVELL 202
           +KSIL+CNT+W+RTL MA +LCE+QA+M  +++KRKRK     GNFPNA EVCRMGVE L
Sbjct: 130 VKSILMCNTSWRRTLEMAEKLCEVQAKM-RESKKRKRKGNNERGNFPNAREVCRMGVEAL 189

Query: 203 KKHNLGYRAGFIINFAQRVQNATIDLQ-------NPNNFPKIKGFGPFATANLLMCLGFY 262
           K H LGYRA +++ FAQ V++  I+LQ       +P+ FPKIKGFGPFATAN+ MCLGFY
Sbjct: 190 KNHCLGYRANYVVKFAQSVESGRINLQSLEKPVSSPDAFPKIKGFGPFATANIFMCLGFY 249

Query: 263 RQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGK 322
            QLPIDTETIRH+KQVHG Q+C  KTV EDVKQIYD YAP+QCLAY LELV+YYE+KFGK
Sbjct: 250 HQLPIDTETIRHLKQVHGIQYCTKKTVGEDVKQIYDTYAPYQCLAYWLELVQYYETKFGK 309

Query: 323 LSELCSLDYHKISGATLNL 332
           LSEL S DYHKISG+TL+L
Sbjct: 310 LSELSSFDYHKISGSTLHL 326

[Close]

BLAST of Clc08G00010 vs. NCBI nr
Match: XP_022951918.1 (uncharacterized protein LOC111454659 [Cucurbita moschata])

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-124
Identity = 226/319 (70.85%), Postives = 270/319 (84.64%), Query Frame = 0


Query: 23  MSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQIH 82
           +SDF+LE+AVCNHG FMM PNQWIPSSKTLQRPLRLSNS++S+ VSINQ+SS LLT+QIH
Sbjct: 10  VSDFNLEKAVCNHGAFMMAPNQWIPSSKTLQRPLRLSNSDTSLLVSINQSSSSLLTLQIH 69

Query: 83  SSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFEDA 142
            S  +L P+D+  ILDQV RMLRLTEKDEDE+R+FQ+LHP AKQ+GFGR+FRSP++FED 
Sbjct: 70  -SPRSLPPKDEVAILDQVARMLRLTEKDEDEIRRFQNLHPTAKQIGFGRIFRSPSLFEDV 129

Query: 143 LKSILLCNTTWKRTLAMAGQLCELQARMSSQNRKRKRK---LIGNFPNAEEVCRMGVELL 202
           +KSIL+CNT+W+RTL MA +LCE+QA+M  +++KRKRK     GNFPNA EVCRMGVE L
Sbjct: 130 VKSILMCNTSWRRTLEMAEKLCEVQAKM-RESKKRKRKGNNERGNFPNAREVCRMGVEAL 189

Query: 203 KKHNLGYRAGFIINFAQRVQNATIDLQ-------NPNNFPKIKGFGPFATANLLMCLGFY 262
           K H LGYRA +++ FAQ V++  I+LQ       +P+ FPKIKGFGPFATAN+ MCLGFY
Sbjct: 190 KNHCLGYRANYVVKFAQSVESGRINLQSLEKPVSSPDAFPKIKGFGPFATANIFMCLGFY 249

Query: 263 RQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGK 322
            QLPIDTETIRH+KQVHG Q+C  KTV EDVKQIYD YAP+QCLAY LELV+YYE+KFGK
Sbjct: 250 HQLPIDTETIRHLKQVHGIQYCTKKTVGEDVKQIYDTYAPYQCLAYWLELVQYYETKFGK 309

Query: 323 LSELCSLDYHKISGATLNL 332
           LSEL S DYHKISG+TL+L
Sbjct: 310 LSELSSFDYHKISGSTLHL 326

[Close]

BLAST of Clc08G00010 vs. NCBI nr
Match: XP_022156993.1 (uncharacterized protein LOC111023822 [Momordica charantia])

HSP 1 Score: 432.2 bits (1110), Expect = 4.1e-117
Identity = 223/322 (69.25%), Postives = 257/322 (79.81%), Query Frame = 0


Query: 21  KTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQ 80
           +T S FDLERAVCNHG FMMPPN+WIPSSKTLQRPLRL++S +SV VSI+Q SS LL IQ
Sbjct: 14  ETTSGFDLERAVCNHGFFMMPPNKWIPSSKTLQRPLRLADSTTSVLVSISQPSSHLLNIQ 73

Query: 81  IHSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFE 140
           IH SS + SP D+Q ILDQV RMLR+TE+DE+ +R FQ+LH KAK++GFGRLFRSPT+FE
Sbjct: 74  IH-SSPSFSPLDRQAILDQVTRMLRITERDEENIRNFQNLHAKAKEIGFGRLFRSPTLFE 133

Query: 141 DALKSILLCNTTWKRTLAMAGQLCELQARMS----SQNRKRKRK-------LIGNFPNAE 200
           DA+KSILLCN TW+RTLAMAGQLCELQA++     +  +KRKRK         GNFP A 
Sbjct: 134 DAVKSILLCNATWRRTLAMAGQLCELQAKLGRGPITDGKKRKRKGKGECELEGGNFPTAA 193

Query: 201 EVCRMGVELLKKHNLGYRAGFIINFAQRVQNATIDLQNPN---NFPKIKGFGPFATANLL 260
           E+CRM V LL+KH +GYRA +II+ AQRVQN  IDLQ      +FPKIKGFGPF TAN+ 
Sbjct: 194 ELCRMSVLLLQKHFIGYRAVYIIDLAQRVQNGKIDLQKIERALSFPKIKGFGPFTTANVF 253

Query: 261 MCLGFYRQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYY 320
           MCLG Y +LPIDTETIRH+KQVHGRQ CN KT  E VK +YDKYAPFQCLAY +ELVEYY
Sbjct: 254 MCLGLYDRLPIDTETIRHLKQVHGRQDCNMKTAEEAVKDVYDKYAPFQCLAYWMELVEYY 313

Query: 321 ESKFGKLSELCSLDYHKISGAT 329
           ES+FGKLSEL   DY KISG T
Sbjct: 314 ESRFGKLSELGWHDYKKISGTT 334

[Close]

BLAST of Clc08G00010 vs. NCBI nr
Match: XP_021905122.1 (uncharacterized protein LOC110820055 isoform X2 [Carica papaya])

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-85
Identity = 172/323 (53.25%), Postives = 223/323 (69.04%), Query Frame = 0


Query: 26  FDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTS-SFLLTIQIHSS 85
           F+LE+AVCNHG FMMPPN W PS KTL+RPLRLSN +SSV+ SI+  S S  L IQ+H  
Sbjct: 14  FNLEKAVCNHGFFMMPPNLWSPSKKTLERPLRLSNVSSSVYASISHPSNSTFLVIQLHHI 73

Query: 86  SAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFEDALK 145
              +S  D+  IL+QV RMLR+++KDE+ +R+FQ +H  AK  GFGR+FRSP++FED +K
Sbjct: 74  H-NISSSDKHAILEQVGRMLRISKKDEEVVREFQKVHEAAKNKGFGRVFRSPSLFEDVVK 133

Query: 146 SILLCNTTWKRTLAMAGQLCELQ---ARMSSQNRKRKRKLI----------------GNF 205
           S+LLCN TW RTL MA  LCELQ    R  S  +++KRK                  GNF
Sbjct: 134 SLLLCNCTWGRTLKMAKSLCELQYEIVRGISVEKRKKRKRTTNRSINDTMNQEYFSKGNF 193

Query: 206 PNAEEVCRMGVELLKKH-NLGYRAGFIINFAQRVQNATIDLQNPNNFPKIKGFGPFATAN 265
           PNAEE+  +  +LL++   LGYRA ++IN AQ V++  +DL N  +  KIKGFG F  AN
Sbjct: 194 PNAEELAGLSPDLLEERCKLGYRANYVINLAQLVKSGRLDLTNIQDLVKIKGFGSFVCAN 253

Query: 266 LLMCLGFYRQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVE 325
           + MC+GFY+ +P DTET+RH+KQVHG + C+  T+ +DVK IYDKY+PFQ LAY  EL+ 
Sbjct: 254 VSMCIGFYQNIPADTETMRHLKQVHGLETCSRSTLVKDVKAIYDKYSPFQALAYWFELLN 313

Query: 326 YYESKFGKLSELCSLDYHKISGA 328
           YYESK GKLSEL    Y  ++G+
Sbjct: 314 YYESKCGKLSELPCSKYPSVTGS 335

[Close]

BLAST of Clc08G00010 vs. ExPASy TrEMBL
Match: A0A6J1GJ25 (uncharacterized protein LOC111454659 OS=Cucurbita moschata OX=3662 GN=LOC111454659 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.2e-124
Identity = 226/319 (70.85%), Postives = 270/319 (84.64%), Query Frame = 0


Query: 23  MSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQIH 82
           +SDF+LE+AVCNHG FMM PNQWIPSSKTLQRPLRLSNS++S+ VSINQ+SS LLT+QIH
Sbjct: 10  VSDFNLEKAVCNHGAFMMAPNQWIPSSKTLQRPLRLSNSDTSLLVSINQSSSSLLTLQIH 69

Query: 83  SSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFEDA 142
            S  +L P+D+  ILDQV RMLRLTEKDEDE+R+FQ+LHP AKQ+GFGR+FRSP++FED 
Sbjct: 70  -SPRSLPPKDEVAILDQVARMLRLTEKDEDEIRRFQNLHPTAKQIGFGRIFRSPSLFEDV 129

Query: 143 LKSILLCNTTWKRTLAMAGQLCELQARMSSQNRKRKRK---LIGNFPNAEEVCRMGVELL 202
           +KSIL+CNT+W+RTL MA +LCE+QA+M  +++KRKRK     GNFPNA EVCRMGVE L
Sbjct: 130 VKSILMCNTSWRRTLEMAEKLCEVQAKM-RESKKRKRKGNNERGNFPNAREVCRMGVEAL 189

Query: 203 KKHNLGYRAGFIINFAQRVQNATIDLQ-------NPNNFPKIKGFGPFATANLLMCLGFY 262
           K H LGYRA +++ FAQ V++  I+LQ       +P+ FPKIKGFGPFATAN+ MCLGFY
Sbjct: 190 KNHCLGYRANYVVKFAQSVESGRINLQSLEKPVSSPDAFPKIKGFGPFATANIFMCLGFY 249

Query: 263 RQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGK 322
            QLPIDTETIRH+KQVHG Q+C  KTV EDVKQIYD YAP+QCLAY LELV+YYE+KFGK
Sbjct: 250 HQLPIDTETIRHLKQVHGIQYCTKKTVGEDVKQIYDTYAPYQCLAYWLELVQYYETKFGK 309

Query: 323 LSELCSLDYHKISGATLNL 332
           LSEL S DYHKISG+TL+L
Sbjct: 310 LSELSSFDYHKISGSTLHL 326

[Close]

BLAST of Clc08G00010 vs. ExPASy TrEMBL
Match: A0A6J1DS88 (uncharacterized protein LOC111023822 OS=Momordica charantia OX=3673 GN=LOC111023822 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.0e-117
Identity = 223/322 (69.25%), Postives = 257/322 (79.81%), Query Frame = 0


Query: 21  KTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQTSSFLLTIQ 80
           +T S FDLERAVCNHG FMMPPN+WIPSSKTLQRPLRL++S +SV VSI+Q SS LL IQ
Sbjct: 14  ETTSGFDLERAVCNHGFFMMPPNKWIPSSKTLQRPLRLADSTTSVLVSISQPSSHLLNIQ 73

Query: 81  IHSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSPTVFE 140
           IH SS + SP D+Q ILDQV RMLR+TE+DE+ +R FQ+LH KAK++GFGRLFRSPT+FE
Sbjct: 74  IH-SSPSFSPLDRQAILDQVTRMLRITERDEENIRNFQNLHAKAKEIGFGRLFRSPTLFE 133

Query: 141 DALKSILLCNTTWKRTLAMAGQLCELQARMS----SQNRKRKRK-------LIGNFPNAE 200
           DA+KSILLCN TW+RTLAMAGQLCELQA++     +  +KRKRK         GNFP A 
Sbjct: 134 DAVKSILLCNATWRRTLAMAGQLCELQAKLGRGPITDGKKRKRKGKGECELEGGNFPTAA 193

Query: 201 EVCRMGVELLKKHNLGYRAGFIINFAQRVQNATIDLQNPN---NFPKIKGFGPFATANLL 260
           E+CRM V LL+KH +GYRA +II+ AQRVQN  IDLQ      +FPKIKGFGPF TAN+ 
Sbjct: 194 ELCRMSVLLLQKHFIGYRAVYIIDLAQRVQNGKIDLQKIERALSFPKIKGFGPFTTANVF 253

Query: 261 MCLGFYRQLPIDTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYY 320
           MCLG Y +LPIDTETIRH+KQVHGRQ CN KT  E VK +YDKYAPFQCLAY +ELVEYY
Sbjct: 254 MCLGLYDRLPIDTETIRHLKQVHGRQDCNMKTAEEAVKDVYDKYAPFQCLAYWMELVEYY 313

Query: 321 ESKFGKLSELCSLDYHKISGAT 329
           ES+FGKLSEL   DY KISG T
Sbjct: 314 ESRFGKLSELGWHDYKKISGTT 334

[Close]

BLAST of Clc08G00010 vs. ExPASy TrEMBL
Match: A0A6A1W9S6 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G027886 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 6.4e-84
Identity = 177/370 (47.84%), Postives = 242/370 (65.41%), Query Frame = 0


Query: 20  EKTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQ----TSSF 79
           E+ +  F++E+AVCNHG FMM PN WIPS+KTLQRPLRL+NS  SV VSI+     T+++
Sbjct: 11  EECVRTFNMEKAVCNHGFFMMAPNAWIPSTKTLQRPLRLANSAVSVLVSISHPASGTANY 70

Query: 80  LLTIQIHSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRS 139
           +L IQ+H +   +SPQD++ IL+QV RMLR++E+DE  LR+FQ+LHP+AK+ GFGR FRS
Sbjct: 71  IL-IQVHDTD-KVSPQDEKAILEQVARMLRISERDERNLREFQNLHPEAKEKGFGRCFRS 130

Query: 140 PTVFEDALKSILLCNTTWKRTLAMAGQLCELQ---------------ARMSSQNRKRKRK 199
           P++FEDA+KS+LLCN TW RTL MA  LCELQ               AR  S+ R  KRK
Sbjct: 131 PSLFEDAIKSLLLCNCTWTRTLDMAKALCELQWELANGLIPDKCENLARQYSRKRGLKRK 190

Query: 200 L------------------------------IGNFPNAEEVCRMGVELLKKH-NLGYRAG 259
                                          +GNFP+++EV  +    L+ H NLGYRA 
Sbjct: 191 QATRKQSKVKKCERNCSDNSQLPLKGKDCRPLGNFPSSKEVAMLNEYFLENHCNLGYRAR 250

Query: 260 FIINFAQRVQNATIDLQNPNN------------FPKIKGFGPFATANLLMCLGFYRQLPI 319
           +I+  A++V++  + L+  ++              KIKGFGPFA AN++MC+G+Y+ +P+
Sbjct: 251 YIVKLAKQVESGKLKLKEFDDDHSATCEELYEKLTKIKGFGPFACANVMMCMGYYQLVPV 310

Query: 320 DTETIRHIKQVHGRQFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGKLSELC 328
           DTET+RH++QVHGR+    +TV EDVK +YDK+APFQ LAY  EL+E+YE KFGKLSEL 
Sbjct: 311 DTETVRHLRQVHGRK---KETVHEDVKDVYDKHAPFQSLAYWFELLEHYERKFGKLSELP 370

[Close]

BLAST of Clc08G00010 vs. ExPASy TrEMBL
Match: A0A2P5ACW8 (DNA glycosylase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_344830 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 174/357 (48.74%), Postives = 236/357 (66.11%), Query Frame = 0


Query: 21  KTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQT--SSFLLT 80
           ++ S F++E+AVCNHG FMM PN+W PS+KTLQRPLRL++  SSV VSI+ +   S LL 
Sbjct: 13  ESKSSFNMEKAVCNHGFFMMAPNRWSPSAKTLQRPLRLADGASSVTVSISHSPLHSHLLY 72

Query: 81  IQI--HSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSP 140
           I++   S S ALS  D   IL+QV RMLR+T++DE ++R+FQ +HP+AK+ GFGR+FRSP
Sbjct: 73  IRVLLQSPSKALSLSDSNAILEQVGRMLRITKRDERDVREFQKVHPQAKERGFGRVFRSP 132

Query: 141 TVFEDALKSILLCNTTWKRTLAMAGQLCELQARM---------------SSQNRKRKR-- 200
           ++FEDA+KSILLCN +W RTL MA  LC+LQ  +               S++  KRKR  
Sbjct: 133 SLFEDAVKSILLCNCSWARTLKMAEALCKLQFEVTENHVHPIKKTTTSTSNKGLKRKRAK 192

Query: 201 ---------KLIGNFPNAEEVCRMGVE-LLKKHN--LGYRAGFIINFAQRVQNATID--- 260
                    +++GNFPNA E+  +     L+K+   LGYRA  I++ A+  ++  ++   
Sbjct: 193 TKATDDDDSQIMGNFPNAREIASLDKSYFLEKYTPILGYRAKHILSLAKDFESGKLNGLE 252

Query: 261 ---------LQNPNN---FPKIKGFGPFATANLLMCLGFYRQLPIDTETIRHIKQVHGRQ 320
                    L +        KI+GFGPF  AN+LMC+  Y  +P D+ETIRH++QVHGR+
Sbjct: 253 VAEKAEEEALHHEEMILIMKKIRGFGPFVCANVLMCIRIYENVPADSETIRHLQQVHGRK 312

Query: 321 FCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGKLSELCSLDYHKISGATL 330
            CN KT+ ++VK+IYDKYAPFQCLAY +EL+EYYE KFGKLSEL    Y  ISG+ L
Sbjct: 313 NCNKKTILKEVKEIYDKYAPFQCLAYWMELLEYYEDKFGKLSELPESSYKTISGSRL 369

[Close]

BLAST of Clc08G00010 vs. ExPASy TrEMBL
Match: A0A2P5FT40 (DNA glycosylase OS=Trema orientale OX=63057 GN=TorRG33x02_031220 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 172/358 (48.04%), Postives = 235/358 (65.64%), Query Frame = 0


Query: 21  KTMSDFDLERAVCNHGQFMMPPNQWIPSSKTLQRPLRLSNSNSSVFVSINQT--SSFLLT 80
           ++ S F++E+AVCNHG FMM PN+W PS+KTLQRPLRL++  SSV VSI+ +   S LL 
Sbjct: 13  ESKSSFNMEKAVCNHGFFMMAPNRWSPSAKTLQRPLRLADGASSVTVSISHSPLHSHLLY 72

Query: 81  IQI--HSSSAALSPQDQQTILDQVVRMLRLTEKDEDELRKFQSLHPKAKQMGFGRLFRSP 140
           I++   S S  LS  D   IL+QV RMLR+TE+DE ++R+FQ +HP+AK+ GFGR+FRSP
Sbjct: 73  IRVLLQSPSKGLSLSDSNAILEQVGRMLRITERDERDVREFQKVHPQAKERGFGRVFRSP 132

Query: 141 TVFEDALKSILLCNTTWKRTLAMAGQLCELQ---------------ARMSSQNRKRKR-- 200
           ++FEDA+KSILLCN +W RTL MA  LC+LQ               +  S+++ KRKR  
Sbjct: 133 SLFEDAVKSILLCNCSWARTLKMAEALCKLQFEVTENHVHTIRRTTSSTSNKDLKRKRAK 192

Query: 201 ----------KLIGNFPNAEEVCRM-GVELLKKHN--LGYRAGFIINFAQRVQNATID-L 260
                     +++GNFPNA E+  +     L+K+   LGYRA  I++ A+  ++  ++ L
Sbjct: 193 SKASTDDDDSQIVGNFPNAREIASLDNSYFLEKYTPILGYRAKHILSLAKDFESGKLNGL 252

Query: 261 QNPNN--------------FPKIKGFGPFATANLLMCLGFYRQLPIDTETIRHIKQVHGR 320
           +                     I+GFGPF  AN+LMC+  Y  +P D+ETIRH++QVH R
Sbjct: 253 EEAEKAAEEVLHHEEMIMIMKNIRGFGPFVCANVLMCIRIYENVPADSETIRHLQQVHAR 312

Query: 321 QFCNNKTVREDVKQIYDKYAPFQCLAYRLELVEYYESKFGKLSELCSLDYHKISGATL 330
           + CN KT++++VK+IYDKYAPFQCLAY +EL+EYYE KFGKLSEL    Y  ISG+ L
Sbjct: 313 KNCNKKTIQKEVKEIYDKYAPFQCLAYWMELLEYYEDKFGKLSELPESSYKTISGSRL 370

The following BLAST results are available for this feature:

BLAST of Clc08G00010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877617.1	1.0e-136	87.46	uncharacterized protein LOC120069874 [Benincasa hispida]	[more]
KAG6585875.1	4.5e-124	70.85	hypothetical protein SDJN03_18608, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951918.1	4.5e-124	70.85	uncharacterized protein LOC111454659 [Cucurbita moschata]	[more]
XP_022156993.1	4.1e-117	69.25	uncharacterized protein LOC111023822 [Momordica charantia]	[more]
XP_021905122.1	3.2e-85	53.25	uncharacterized protein LOC110820055 isoform X2 [Carica papaya]	[more]

BLAST of Clc08G00010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc08G00010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJ25	2.2e-124	70.85	uncharacterized protein LOC111454659 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1DS88	2.0e-117	69.25	uncharacterized protein LOC111023822 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6A1W9S6	6.4e-84	47.84	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G027886 PE=4 SV=1	[more]
A0A2P5ACW8	3.9e-81	48.74	DNA glycosylase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_344830 PE=4 SV=1	[more]
A0A2P5FT40	1.1e-80	48.04	DNA glycosylase OS=Trema orientale OX=63057 GN=TorRG33x02_031220 PE=4 SV=1	[more]

BLAST of Clc08G00010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 138..251 e-value: 5.6E-12 score: 47.9
None	No IPR available	PANTHER	PTHR10242	8-OXOGUANINE DNA GLYCOSYLASE	coord: 21..327
None	No IPR available	PANTHER	PTHR10242:SF7	BNAC06G12980D PROTEIN	coord: 21..327
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 131..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G00010.2	Clc08G00010.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003824	catalytic activity