Clc07G17200 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G17200
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Tubulin-folding cofactor C
Location	ClcChr07: 31654927 .. 31657308 (-)
RNA-Seq Expression	Clc07G17200
Synteny	Clc07G17200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTGGGTGGTGAAGAAGAGAGGCTTTGTAATTTTAAGACACGAATTTTAGTTTTAACTATTGATGTAATTTAAGTTTAAGTTATCATTTTATAAAAAAATGGCCATCAACTAACTATAAGGTCGGTTTCAAAATTTCAATTGTAGGTTGTAACCCAACTCATTTCCCATCATCGTTAAATTTGTGCAGATTGGGGGTATAGTCACCTGCAGCTGCCGCTGTAGCTGTAGCGCTCATTAATGGCGGACGATGACAGAGCTTCGTCCACCCCTAATTCCATCGCTTCAGATCCTTCAGACGCGAATCTTCAGAAGAAGCACGCTTCGGTCATCGAACGCCTCGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACCCGCAGATCGGAGTCCGATTCCTCTTCCTCTTCCACTTCGTCGTTTCTAGTCCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCTGAACTCGCCCAATGCCGCCTCACGCTGCCGGAGCCCACTCAGCTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAAACCTCTTACTTCTTGCCCTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAATTGAAACAAAGCCTGGATAATTTAAATTCCGAATTGCTACCTAAAAAGAAATTCTCGTTCAAGAACAAAGGCACGAAGAAAGACCCAAAATCGGAGTCGAAAGATCCAGGGCTTGGAAATTCCGATTCTATGTTAACGAGCAAGCAAGAGCAAGCAAGTTATAACGCCCGGGATTCACCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGCAAAGAATTTCAAGGGATCGGATATTGGGGAGTTCACTATCTCGGGTCTTAGTTCGTGCGAGGTCAAATTGATCGGTAGCGTTAGGGCATTATTTATTCATAAACTAAGAAACTGTAAAGTTTATACAGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACCTTTGCAATGGCCTCCCATCAAATTCGGATTCACAATGCGAAGAACAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTCGGAGTGTGCGATTCGCACCGTATTGTGTGAGCTACGAAGGAATTGAAGAAGATCTCAGAGATGCGAGCCTTGGTGAGGAGACAGGAAATTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTTTGGCAGAGGATGAGCGGATTGACACCGTCAAAATCTGATTCACAGAAGGTCGAGCCTTTGAGAGTTAAGTTTTTCATCTCTACTTCTGATAAATCCCAAGTTTTCTTTGATGGTTTTTTGTTGGGTTAATAGAGCAGGATGCATCATAGAGAAATTTAAATGGTTGATTTTGCTGTGTTGTGTTAGTCTTGTTTACAAAACTGGGAATCCTAGCACATTCTTTCCCTTTCAATTGGTTGATTTTTCAACAAATATTTCTTGGCTTGGCTGTTTTTTCTTGCTGCCTTGTGAGTACTGAGTGAGTTGCTATTAGCCACCACTTCACATCTTTGACTGCAGGAATATTATTGTCACTCTTGTATCAATGAAACATTATTTCATAACTATACATTAGTTCTGGAATACGTTTTGTAGGCTTCCGGCTTCCTGCTTTATATATAACTTTGGCTAATGTCATCACGACGTGAATTTATCACCTTAACCCTCGTCCTTCTTTTTTCTGCTCTTCGACTTCTCCTTCCTTCTTTCCGACTTATTTTCCGGCCATTTCCCTTTTTTCTTTTCCTGAGAGTTATGTTTATGTAGTCTATTTTTTTTTAGAGGCCCATTTTTCCAACGAGATTTTTCTAATCAAAATGAAACAAGAGTAAATTTTCTGAAAGAACGACGATGCTAAGAAGAAGAAGCGAAGCTCCGATGCGAAAAGTCGAAGCTCTGACGTGACCAACTCCAATCAACGAGAACAAGAGCGAGAGAGAGAGAGAGCAACGTTTGGAAAAACGTCTGAGTTTCATTTTTAAACAATAGATCTCGCTCTCTCGCTCTTGTTCTCGCCGAACTTACCAGGAATTACGAGTTTCTGTCACTTTTTCTGTAAAGTTCTGATCAGCTGATTACAAATCACAAATAAGTTACTCCCTCTCGCTTCTATATCTTGCTCTTAATAGTTCATTCTAATTATTGTTCTTGCCATTTCTTCCGCTCTATGCATTGTCTCACTACTCTCGGCCAAAATTCTATCAATCGTGTAACATATGAGACACTTGTAGGTATTCATTACAACTGGTAAAAAGTAATAAAAACATTGAAGACCTAGCATATACTTACGTAGGTTGGTGTA

mRNA sequence

TTTTTTTTTGGGTGGTGAAGAAGAGAGGCTTTGTAATTTTAAGACACGAATTTTAGTTTTAACTATTGATGTAATTTAAGTTTAAGTTATCATTTTATAAAAAAATGGCCATCAACTAACTATAAGGTCGGTTTCAAAATTTCAATTGTAGGTTGTAACCCAACTCATTTCCCATCATCGTTAAATTTGTGCAGATTGGGGGTATAGTCACCTGCAGCTGCCGCTGTAGCTGTAGCGCTCATTAATGGCGGACGATGACAGAGCTTCGTCCACCCCTAATTCCATCGCTTCAGATCCTTCAGACGCGAATCTTCAGAAGAAGCACGCTTCGGTCATCGAACGCCTCGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACCCGCAGATCGGAGTCCGATTCCTCTTCCTCTTCCACTTCGTCGTTTCTAGTCCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCTGAACTCGCCCAATGCCGCCTCACGCTGCCGGAGCCCACTCAGCTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAAACCTCTTACTTCTTGCCCTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAATTGAAACAAAGCCTGGATAATTTAAATTCCGAATTGCTACCTAAAAAGAAATTCTCGTTCAAGAACAAAGGCACGAAGAAAGACCCAAAATCGGAGTCGAAAGATCCAGGGCTTGGAAATTCCGATTCTATGTTAACGAGCAAGCAAGAGCAAGCAAGTTATAACGCCCGGGATTCACCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGCAAAGAATTTCAAGGGATCGGATATTGGGGAGTTCACTATCTCGGGTCTTAGTTCGTGCGAGGTCAAATTGATCGGTAGCGTTAGGGCATTATTTATTCATAAACTAAGAAACTGTAAAGTTTATACAGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACCTTTGCAATGGCCTCCCATCAAATTCGGATTCACAATGCGAAGAACAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTCGGAGTGTGCGATTCGCACCGTATTGTGTGAGCTACGAAGGAATTGAAGAAGATCTCAGAGATGCGAGCCTTGGTGAGGAGACAGGAAATTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTTTGGCAGAGGATGAGCGGATTGACACCGTCAAAATCTGATTCACAGAAGGTCGAGCCTTTGAGAGTTAAGTTTTTCATCTCTACTTCTGATAAATCCCAAGTTTTCTTTGATGGTTTTTTGTTGGGTTAATAGAGCAGGATGCATCATAGAGAAATTTAAATGGTTGATTTTGCTGTGTTGTGTTAGTCTTGTTTACAAAACTGGGAATCCTAGCACATTCTTTCCCTTTCAATTGGTTGATTTTTCAACAAATATTTCTTGGCTTGGCTGTTTTTTCTTGCTGCCTTGTGAGTACTGAGTGAGTTGCTATTAGCCACCACTTCACATCTTTGACTGCAGGAATATTATTGTCACTCTTGTATCAATGAAACATTATTTCATAACTATACATTAGTTCTGGAATACGTTTTGTAGGCTTCCGGCTTCCTGCTTTATATATAACTTTGGCTAATGTCATCACGACGTGAATTTATCACCTTAACCCTCGTCCTTCTTTTTTCTGCTCTTCGACTTCTCCTTCCTTCTTTCCGACTTATTTTCCGGCCATTTCCCTTTTTTCTTTTCCTGAGAGTTATGTTTATGTAGTCTATTTTTTTTTAGAGGCCCATTTTTCCAACGAGATTTTTCTAATCAAAATGAAACAAGAGTAAATTTTCTGAAAGAACGACGATGCTAAGAAGAAGAAGCGAAGCTCCGATGCGAAAAGTCGAAGCTCTGACGTGACCAACTCCAATCAACGAGAACAAGAGCGAGAGAGAGAGAGAGCAACGTTTGGAAAAACGTCTGAGTTTCATTTTTAAACAATAGATCTCGCTCTCTCGCTCTTGTTCTCGCCGAACTTACCAGGAATTACGAGTTTCTGTCACTTTTTCTGTAAAGTTCTGATCAGCTGATTACAAATCACAAATAAGTTACTCCCTCTCGCTTCTATATCTTGCTCTTAATAGTTCATTCTAATTATTGTTCTTGCCATTTCTTCCGCTCTATGCATTGTCTCACTACTCTCGGCCAAAATTCTATCAATCGTGTAACATATGAGACACTTGTAGGTATTCATTACAACTGGTAAAAAGTAATAAAAACATTGAAGACCTAGCATATACTTACGTAGGTTGGTGTA

Coding sequence (CDS)

ATGGCGGACGATGACAGAGCTTCGTCCACCCCTAATTCCATCGCTTCAGATCCTTCAGACGCGAATCTTCAGAAGAAGCACGCTTCGGTCATCGAACGCCTCGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACCCGCAGATCGGAGTCCGATTCCTCTTCCTCTTCCACTTCGTCGTTTCTAGTCCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCTGAACTCGCCCAATGCCGCCTCACGCTGCCGGAGCCCACTCAGCTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAAACCTCTTACTTCTTGCCCTCGTATGAGGTACGAGCTTCACTCAAATCGATTTCGGAATTGAAACAAAGCCTGGATAATTTAAATTCCGAATTGCTACCTAAAAAGAAATTCTCGTTCAAGAACAAAGGCACGAAGAAAGACCCAAAATCGGAGTCGAAAGATCCAGGGCTTGGAAATTCCGATTCTATGTTAACGAGCAAGCAAGAGCAAGCAAGTTATAACGCCCGGGATTCACCAGGAATCAGAGACAAGGATGGCGAGGTTCTGGCAAAGAATTTCAAGGGATCGGATATTGGGGAGTTCACTATCTCGGGTCTTAGTTCGTGCGAGGTCAAATTGATCGGTAGCGTTAGGGCATTATTTATTCATAAACTAAGAAACTGTAAAGTTTATACAGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACCTTTGCAATGGCCTCCCATCAAATTCGGATTCACAATGCGAAGAACAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTCGGAGTGTGCGATTCGCACCGTATTGTGTGAGCTACGAAGGAATTGAAGAAGATCTCAGAGATGCGAGCCTTGGTGAGGAGACAGGAAATTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTTTGGCAGAGGATGAGCGGATTGACACCGTCAAAATCTGA

Protein sequence

MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEVRASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI

Homology

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BLAST of Clc07G17200 vs. NCBI nr
Match: XP_038874871.1 (tubulin-folding cofactor C [Benincasa hispida])

HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174
Identity = 330/353 (93.48%), Postives = 337/353 (95.47%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESD--SSSSS 60
           MADDD ASS PNSI SDPSDANLQKK A VIERLANRNQTRLENSITRRSESD  SSSSS
Sbjct: 1   MADDDGASSIPNSIPSDPSDANLQKKQALVIERLANRNQTRLENSITRRSESDSSSSSSS 60

Query: 61  TSSFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSY 120
           TSSFLVRFSDSKRAIESELAQCRLT PEPTQLRSHLDGISTSISDLEKLVAETSYFLPSY
Sbjct: 61  TSSFLVRFSDSKRAIESELAQCRLTPPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSY 120

Query: 121 EVRASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQ 180
           EVRASLKSISELKQSL+NLNSELLPKKKFSFKNKGTKKDPKSESKD GLGN+DSMLT KQ
Sbjct: 121 EVRASLKSISELKQSLENLNSELLPKKKFSFKNKGTKKDPKSESKDTGLGNADSMLTRKQ 180

Query: 181 EQASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNC 240
           +QASYNARDSPGIRDKDGE+L KNFKGSDIGEF+ISGLS+CEVKLIGSVRALFIHKLRNC
Sbjct: 181 QQASYNARDSPGIRDKDGEILVKNFKGSDIGEFSISGLSTCEVKLIGSVRALFIHKLRNC 240

Query: 241 KVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYC 300
           KVYTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYC
Sbjct: 241 KVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYC 300

Query: 301 VSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           V YEGIEEDLR ASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERID +KI
Sbjct: 301 VCYEGIEEDLRVASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDPIKI 353

[Close]

BLAST of Clc07G17200 vs. NCBI nr
Match: XP_022984301.1 (tubulin-folding cofactor C [Cucurbita maxima])

HSP 1 Score: 615.1 bits (1585), Expect = 3.6e-172
Identity = 321/351 (91.45%), Postives = 337/351 (96.01%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++LQKKHASVIERLANRNQTRLENSITRRSES SSSSST+
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESGSSSSSTT 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSYFLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYFLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGEVL KNFKGSD+GEF++SGLSSCEVKLIGS+RALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFSLSGLSSCEVKLIGSIRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. NCBI nr
Match: XP_023553493.1 (tubulin-folding cofactor C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 614.4 bits (1583), Expect = 6.2e-172
Identity = 323/351 (92.02%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++LQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGEVL KNFKGSD+GEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAV SPNWSILA DERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVHSPNWSILAADERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. NCBI nr
Match: KAG6577293.1 (Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 614.0 bits (1582), Expect = 8.1e-172
Identity = 323/351 (92.02%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++LQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SY ARDSPGIRDKDGEVL KNFKGSD+GEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAVQSPNWSILAE ERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. NCBI nr
Match: XP_022929266.1 (tubulin-folding cofactor C [Cucurbita moschata])

HSP 1 Score: 614.0 bits (1582), Expect = 8.1e-172
Identity = 323/351 (92.02%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++L KKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLHKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGEVL KNFKGSD+GEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAVQSPNWSILAE ERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot
Match: Q9SMR2 (Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 3.4e-104
Identity = 209/351 (59.54%), Postives = 259/351 (73.79%), Query Frame = 0


Query: 3   DDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSF 62
           +DD  SS   ++     D  LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSF
Sbjct: 2   EDDGQSSVAETL-----DPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSF 61

Query: 63  LVRFSDSKRAIESELAQCRL--TLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 122
           L +FSDSKR+IES +A+ RL  +  + ++L+S L  IS +I +LEKL+AE SYFLPSYEV
Sbjct: 62  LAKFSDSKRSIESRIAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEV 121

Query: 123 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 182
           R+SLK +S+LKQSLD L+ EL+PKKKFSFK+K T K P  ESK P +   D +L  K   
Sbjct: 122 RSSLKIVSDLKQSLDILSGELVPKKKFSFKSKSTTKKP--ESKLPEIQKPDVVLPPK--- 181

Query: 183 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 242
                RDSPG+R+K GE L K+F+GS IGEFT+S L SC+VKL G+V ALF+H+L+ C V
Sbjct: 182 -LVPVRDSPGLRNKHGETLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSV 241

Query: 243 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 302
           YTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRVRSRPIIEDS  VRFAPYC+ 
Sbjct: 242 YTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLD 301

Query: 303 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           Y+GI+EDL+ A L EET NW NVDDFRWLRAVQSPNWS+L E+ER+  + I
Sbjct: 302 YKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTI 341

[Close]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot
Match: Q8VCN9 (Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.4e-39
Identity = 113/348 (32.47%), Postives = 181/348 (52.01%), Query Frame = 0


Query: 5   DRASSTPNSIASDPSDANLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSS 64
           D + +  ++ A  P D +L      V ERL  R Q R   +E    +R + +     +  
Sbjct: 5   DCSMALADAAAGSPRDLSL------VPERLQRREQERQIEVERRKQKRQDQEVEEEKSGF 64

Query: 65  FLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEVR 124
           F   F+  + A+E EL +   +     +  + L G       L KL+ ++  FL +Y++R
Sbjct: 65  FAAAFARERAAVE-ELLRGEASAERLEEAANRLQG-------LRKLLNDSVLFLAAYDLR 124

Query: 125 ASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESK---DPGLGNSDSMLTSKQ 184
               ++++L+  L     EL PKK+F+FK +  KKD    ++    P    + S   +K+
Sbjct: 125 QGQAALAQLQAVLTERRQELQPKKRFAFKAR--KKDAAGTAQVDAAPVTSAAPSPPVTKE 184

Query: 185 EQASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNC 244
           E+ +  A  + G  + + + L K  +     +  +S L++C VKL G+   L + K R C
Sbjct: 185 EEGAPGASWACGFSNLESQDLEKRAEELHQRDVLLSDLTNCTVKLCGNPNTLRLAKARGC 244

Query: 245 KVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYC 304
           KV  GPV  S+ ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED   ++FAPY 
Sbjct: 245 KVLCGPVTTSVFLEDCRDCVLAVACQQLRVHTTKDTRVFLQVTSRAIVEDCSGIQFAPYT 304

Query: 305 VSYEGIEEDLRDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 346
            SY GI++D +D+ L     NW+ VDDF WL R V SPNWSIL E+ER
Sbjct: 305 WSYPGIDKDFQDSGLDRSKNNWDQVDDFNWLARNVASPNWSILPEEER 336

[Close]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot
Match: Q5R5J7 (Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 108/338 (31.95%), Postives = 174/338 (51.48%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSSFLVRFSDSKRAIESE 79
           D   Q+  + V ERL  R Q R   +E    +R   +    ++  F   F+  + A+E  
Sbjct: 15  DMESQRDMSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFAATFARERAAVEE- 74

Query: 80  LAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEVRASLKSISELKQSLDN 139
                  L E  +    L+  ++ +  L+KL+ ++ +FL +Y++R   ++++ L+ +L  
Sbjct: 75  -------LLERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAALAE 134

Query: 140 LNSELLPKKKFSFKNKGTKKDPKSESK---DPGL-----GNSDSMLTSKQEQASYNARDS 199
              EL PKK+F+FK +G  KD  S +K    PG+        DS L  K E     +   
Sbjct: 135 RRRELQPKKRFAFKTRG--KDAASCTKVDAAPGIPPAVESIQDSPLPKKAE-GDLGSSWL 194

Query: 200 PGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGS 259
            G  + + +VL K        +  ++ LS+C V+L G+   L + K  +CK+  GPV  S
Sbjct: 195 CGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTS 254

Query: 260 ILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVSYEGIEEDL 319
           + ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED   ++FAPY  SY  I++D 
Sbjct: 255 VFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDF 314

Query: 320 RDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 346
             + L     NW +VDDF WL R + SPNW IL E+ER
Sbjct: 315 ESSGLDRSKNNWNDVDDFNWLARDMASPNWCILPEEER 341

[Close]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot
Match: Q3SZE9 (Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.9e-37
Identity = 102/336 (30.36%), Postives = 174/336 (51.79%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANR---NQTRLENSITRRSESDSSSSSTSSFLVRFSDSKRAIESE 79
           D   Q++   V ERL  R    Q  +E    +R + +     +  F   F+  + A+E  
Sbjct: 15  DLGSQRERTLVPERLQKREHERQLEVERRKQKRQDQEVEEEKSDFFAAAFARERSAVEE- 74

Query: 80  LAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEVRASLKSISELKQSLDN 139
                  L E  +    L+  +  +  L+KL+ ++  FL +Y++R + + ++ L+ +L  
Sbjct: 75  -------LLESGESVERLEEAAARLQGLQKLINDSVLFLAAYDLRQAQEVLARLQAALAK 134

Query: 140 LNSELLPKKKFSFKNKGTKKDPKSESK---DPGLGNSDSMLTSK---QEQASYNARDSPG 199
              EL PKK+F+FK +  KKD  S ++    P    ++  LTS    +E+  +++    G
Sbjct: 135 RRQELQPKKRFAFKTR--KKDAASATQVASAPDAPAAEGSLTSPPPLKEEGDFDSSWICG 194

Query: 200 IRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSIL 259
             +   +VL K  +     +  ++ L +C +KL G+   L + K + C +  GPV  S+ 
Sbjct: 195 FSNLQSQVLEKRAEELHQQDVLLTQLRNCTIKLYGNPNTLRLTKAQGCTLLCGPVSTSVF 254

Query: 260 IDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVSYEGIEEDLRD 319
           ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED   ++FAPY  SY GI++D   
Sbjct: 255 LEDCSDCVLAVACQQLRVHTTKDTRIFLQVTSRAIMEDCTGIQFAPYTWSYPGIDKDFEG 314

Query: 320 ASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 346
           + L +   NW +VDDF WL R V SPNW++L E+ER
Sbjct: 315 SGLDKNKNNWNDVDDFNWLARDVASPNWNVLPEEER 340

[Close]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot
Match: Q15814 (Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 7.9e-37
Identity = 108/338 (31.95%), Postives = 173/338 (51.18%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANRNQTR---LENSITRRSESDSSSSSTSSFLVRFSDSKRAIESE 79
           D   Q+  + V ERL  R Q R   +E    +R   +    ++  F+  F   + A+E  
Sbjct: 15  DMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATFVRERAAVEE- 74

Query: 80  LAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEVRASLKSISELKQSLDN 139
                  L E  +    L+  ++ +  L+KL+ ++ +FL +Y++R   ++++ L+ +L  
Sbjct: 75  -------LLERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAALAE 134

Query: 140 LNSELLPKKKFSFKNKGTKKDPKSESK---DPGL-----GNSDSMLTSKQEQASYNARDS 199
               L PKK+F+FK +G  KD  S +K    PG+        DS L  K E         
Sbjct: 135 RRRGLQPKKRFAFKTRG--KDAASSTKVDAAPGIPPAVESIQDSPLPKKAE-GDLGPSWV 194

Query: 200 PGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGS 259
            G  + + +VL K        +  ++ LS+C V+L G+   L + K  +CK+  GPV  S
Sbjct: 195 CGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTS 254

Query: 260 ILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVSYEGIEEDL 319
           + ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED   ++FAPY  SY  I++D 
Sbjct: 255 VFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDF 314

Query: 320 RDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 346
             + L     NW +VDDF WL R + SPNWSIL E+ER
Sbjct: 315 ESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEER 341

[Close]

BLAST of Clc07G17200 vs. ExPASy TrEMBL
Match: A0A6J1J4V8 (Tubulin-folding cofactor C OS=Cucurbita maxima OX=3661 GN=LOC111482642 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.8e-172
Identity = 321/351 (91.45%), Postives = 337/351 (96.01%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++LQKKHASVIERLANRNQTRLENSITRRSES SSSSST+
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESGSSSSSTT 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSYFLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYFLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGEVL KNFKGSD+GEF++SGLSSCEVKLIGS+RALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFSLSGLSSCEVKLIGSIRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. ExPASy TrEMBL
Match: A0A6J1EMN1 (Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.9e-172
Identity = 323/351 (92.02%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MADDD ASS PNSI   PSD++L KKHASVIERLANRNQTRLENSITRRSESDSSSSSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLHKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES+LAQCRLT PEP+Q+RSHLDGIS SISDLEKLVAETSY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQSL++LNSELLPKKKFSFKNKGTKKD KSESKD GLGN+ SMLT+KQ+Q
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGEVL KNFKGSD+GEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPYCVS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL+DASLGEETGNWENVDDFRWLRAVQSPNWSILAE ERIDTVKI
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKI 351

[Close]

BLAST of Clc07G17200 vs. ExPASy TrEMBL
Match: A0A5D3D2T6 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00100 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.7e-170
Identity = 321/351 (91.45%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD D ASS PNSI SDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLT P+P QLRSHLDGISTSISDLEKLVAE+SY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQ+LDNLNSELLPKKKFSFKNK TKKD KSESKDPGLGN+DSMLT+KQ+Q
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASYNARDSPGIRDKDGE+L KNFKGSDIGEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL EDERIDT+KI
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKI 351

[Close]

BLAST of Clc07G17200 vs. ExPASy TrEMBL
Match: A0A1S3BX62 (Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.7e-170
Identity = 321/351 (91.45%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD D ASS PNSI SDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLT P+P QLRSHLDGISTSISDLEKLVAE+SY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQ+LDNLNSELLPKKKFSFKNK TKKD KSESKDPGLGN+DSMLT+KQ+Q
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASYNARDSPGIRDKDGE+L KNFKGSDIGEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL EDERIDT+KI
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKI 351

[Close]

BLAST of Clc07G17200 vs. ExPASy TrEMBL
Match: A0A5A7TP94 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004650 PE=3 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 8.1e-170
Identity = 320/351 (91.17%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MADDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60
           MAD D ASS PNSI SDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLVRFSDSKRAIESELAQCRLTLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 120
           SFLVRFSDSKRAIES LAQCRLT P+P QLRSHLDGISTSISDLEKLVAE+SY LPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 180
           RASLKSISELKQ+LDNLNSELLPKKKFSFKNK TKKD KSESKDPGLGN+DSMLT+KQ+Q
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASYNARDSPGIRDKDGE+L KNFKGSDIGEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 300
           YTGPVMGSILIDDV+ CTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDS SVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVQECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           YEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL EDERIDT+KI
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKI 351

[Close]

BLAST of Clc07G17200 vs. TAIR 10
Match: AT4G39920.1 (C-CAP/cofactor C-like domain-containing protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.4e-105
Identity = 209/351 (59.54%), Postives = 259/351 (73.79%), Query Frame = 0


Query: 3   DDDRASSTPNSIASDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTSSF 62
           +DD  SS   ++     D  LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSF
Sbjct: 2   EDDGQSSVAETL-----DPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSF 61

Query: 63  LVRFSDSKRAIESELAQCRL--TLPEPTQLRSHLDGISTSISDLEKLVAETSYFLPSYEV 122
           L +FSDSKR+IES +A+ RL  +  + ++L+S L  IS +I +LEKL+AE SYFLPSYEV
Sbjct: 62  LAKFSDSKRSIESRIAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEV 121

Query: 123 RASLKSISELKQSLDNLNSELLPKKKFSFKNKGTKKDPKSESKDPGLGNSDSMLTSKQEQ 182
           R+SLK +S+LKQSLD L+ EL+PKKKFSFK+K T K P  ESK P +   D +L  K   
Sbjct: 122 RSSLKIVSDLKQSLDILSGELVPKKKFSFKSKSTTKKP--ESKLPEIQKPDVVLPPK--- 181

Query: 183 ASYNARDSPGIRDKDGEVLAKNFKGSDIGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 242
                RDSPG+R+K GE L K+F+GS IGEFT+S L SC+VKL G+V ALF+H+L+ C V
Sbjct: 182 -LVPVRDSPGLRNKHGETLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSV 241

Query: 243 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSRSVRFAPYCVS 302
           YTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRVRSRPIIEDS  VRFAPYC+ 
Sbjct: 242 YTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLD 301

Query: 303 YEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERIDTVKI 352
           Y+GI+EDL+ A L EET NW NVDDFRWLRAVQSPNWS+L E+ER+  + I
Sbjct: 302 YKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTI 341

The following BLAST results are available for this feature:

BLAST of Clc07G17200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874871.1	1.3e-174	93.48	tubulin-folding cofactor C [Benincasa hispida]	[more]
XP_022984301.1	3.6e-172	91.45	tubulin-folding cofactor C [Cucurbita maxima]	[more]
XP_023553493.1	6.2e-172	92.02	tubulin-folding cofactor C [Cucurbita pepo subsp. pepo]	[more]
KAG6577293.1	8.1e-172	92.02	Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929266.1	8.1e-172	92.02	tubulin-folding cofactor C [Cucurbita moschata]	[more]

BLAST of Clc07G17200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMR2	3.4e-104	59.54	Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1	[more]
Q8VCN9	6.4e-39	32.47	Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1	[more]
Q5R5J7	4.6e-37	31.95	Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1	[more]
Q3SZE9	7.9e-37	30.36	Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1	[more]
Q15814	7.9e-37	31.95	Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2	[more]

BLAST of Clc07G17200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4V8	1.8e-172	91.45	Tubulin-folding cofactor C OS=Cucurbita maxima OX=3661 GN=LOC111482642 PE=3 SV=1	[more]
A0A6J1EMN1	3.9e-172	92.02	Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV...	[more]
A0A5D3D2T6	3.7e-170	91.45	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BX62	3.7e-170	91.45	Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1	[more]
A0A5A7TP94	8.1e-170	91.17	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Clc07G17200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39920.1	2.4e-105	59.54	C-CAP/cofactor C-like domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..193
IPR006599	CARP motif	SMART	SM00673	carp	coord: 254..288 e-value: 3.1E-4 score: 30.1 coord: 216..253 e-value: 3.8E-6 score: 36.4
IPR038397	TBCC, N-terminal domain superfamily	GENE3D	1.20.58.1250		coord: 24..145 e-value: 9.0E-24 score: 85.7
IPR012945	Tubulin binding cofactor C-like domain	PFAM	PF07986	TBCC	coord: 210..326 e-value: 3.2E-39 score: 133.4
IPR031925	Tubulin-specific chaperone C, N-terminal	PFAM	PF16752	TBCC_N	coord: 32..145 e-value: 1.9E-29 score: 102.4
IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	GENE3D	2.160.20.70		coord: 190..351 e-value: 1.4E-55 score: 189.5
IPR027684	Tubulin-specific chaperone C	PANTHER	PTHR15139	TUBULIN FOLDING COFACTOR C	coord: 23..351
IPR017901	C-CAP/cofactor C-like domain	PROSITE	PS51329	C_CAP_COFACTOR_C	coord: 175..328 score: 34.728985

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G17200.1	Clc07G17200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007023	post-chaperonin tubulin folding pathway
biological_process	GO:0007021	tubulin complex assembly
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0015631	tubulin binding