Clc07G15465 (gene) Watermelon (cordophanus) v2

Overview
NameClc07G15465
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionEukaryotic translation initiation factor 4C
LocationClcChr07: 30056057 .. 30062790 (+)
RNA-Seq ExpressionClc07G15465
SyntenyClc07G15465
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGTGATACCTTAGTAATTACCCAAATGTTTAGAAAACAATAAGAGTCAGAATAAATAGATGATCAGATCAAGAAACAGGGAAAGAAAGAAAGATACTGTGGGTTTCTTTTGGTAGTTGAGGTAAAATATTAGAGTTGCTTGATTAGAAAGAAGTGGGGACGAGAGATGAATTTGTTTAGTTCAAGAATAGATTTGTTTAATTTCTAATAATGCTTTTGGACCAACTCTACCTCCTCAGTATACAAAAGAAAAGGGCAACTTAGGGTTTTGCCTAACTGGCTTTTGCCTCACCTTCTCTTTTGTAATGTGTGGAAATACTGTTTCTGAAGCACTTGTTTATTCATTTCTGATATTCCGTAAGGTTTATATCAGATTAACCCGTGAAATAGATTTGGTGTGATTTTTTATCTGTGCTGTCCGGGGTCTCCTTTTTTGTTGGTTTATGTTCCTCAGATCAGCTGGAATATCATGTTCTGCCAATCTTGATGCATTAGGCATTCTCTTCCCCATCAGTTAAAAAAGTTTAATGTTCCTATCGGATTGAGTTTGTTGGTTTAAGATTCTATTTCTTTTTAGATAAATTCTTTTATGATTACAAGGGTGTTTTCTTTTTCCAATTTTGGGGAAGATTTTGATTTTATGAGACATTGTTTTTAGTTATTGAATGGTTTTACTAGTTGTTCTTTGTCATCTTCATCTCATCCTTGTGCCATTGTGGTGGGCGCTTGGGGTTTGACTGCAATTTTTAGCATACAGGGAAAAATGGCTTACGTATATTACCGACTGCTTGCAACTGATGAATATGTGGTTTGTCTGTTCCTGTGTGCTCGTTTTGGACATTTGGTGAAATTGTCTTGTAATTTGTTTGCTTTCATTCTGTTTGTTTAACTAGATGCAAGTTATATGGTTAAGACTATGGTTTGTATAAACTAAATCCGAATTATATCAAGTGTGGATAGTTGGAGTCTTACTTTATATGTTCGTAATGGTGTGAATTGTGTGTCTGCGAGGGTGTAATGATTCTGTGTTGGTGGTATTGCAATTACTAATATTGTGTTTCACATGTAACACAGAACACTAAACATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGACGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGGTGCGAGGCGATGTGCATCGATGGGACAAAGCGACTTTGCCATATCCGGGGGAAGATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATACTTGTGGGGCTTCGTGACTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGATGAAGCAAGGCTGTTGAAAGCATATGGTGAACTTCCAGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGCGCTGATGATTATCTTGAGTTTGAGGATGAAGATATCGACAAGATTTAGATTTCAAGTAACCTTTACTTTTGAAGTTTAGAGTCGTGTTTGTGTGGATGATTGGTTATATGGATTTACTCCACTGTTGTTGTACCTTTTACTCTTCTAATTCTGCTGGAGAATTGGTATTTATTGCATAAAATCTGGTAATGATGATATATACATAAATGCGCAATTAAATCTACCTTCCATTTTTGGCAAATGGAACTCACAAGTTCTTCTCGTTTGCTTGTTTGTTGAGTTTTAAGCAAAGAATTCAGATGCTCGTGTTCGTGAAGTGCAAGTGTCAGAAACCTTGTTTTCCTTAGTCTTTGAACGGTTTTTTTTTACGGTAAATTTGTTTGACCAAGTGGTGGGAGACTTGATATTTTTACATGCAAATTTGTTAGAGAATATTATGAAGAAAAGCACAATGGTAATCTCTTTAAGTATGCACAATTTTTTGTAATTTAACTTAAATTTTTCTTGATTAAATTTTGAGGTTATACGATAATCTATATGCCTAATATATATATTTTTTATTATAACGAGTTATTTTATTTTATTATTTATTTTAATAATAATAATAATAAAAAAAAAAACAATATCAAATTAGAAGACTATTTATTATTAGTATGATTATTTTTAATGTTATTATTATCAAATTTGGGTATAACTGGATTGGTTAAGGTCATGGTATGATTTGGTAAAACTGATTGCTCATTAATTTATTTAAAATAAACATTTCAATTTACTCTTGCCTGCAAAATAACTACACACTACTTTTACTCAAGTCACGGTTTAAGGTCATGGTATGATTCAATTTACTCTAATCCATGATGGTTGTATGATCTATACTTTATTTTAAAATATTCAGTTCATAATTAATTTTTGATCTTTATTATTATCCATTATTTCATTAGGCCAATCATATTTGGCTTTTAATTGTTGTTTTATATGCTTAAATAGTAGTTTATTGCTTACCTAAGTTTGTTAAAAAATTTCAACAAAAATTCACAATATTTTTAAAGACTTTGTGATATAAGTGATTTTCATAGAATATTAGTTGATATTTAAATATTTATCAATATATCCGTAAATTAGGGTTACCAATATTTACACAAATAACTATATGTTTGTCTTTGCTCGTGCTCTATTCCCATGTTGCTAATGCCTGACGTAGTTGCCATAGTTGTCGTCTAAGCGGGAAGCTACTAAAAGAATAAAAGAAAATTGCAAAATGAATAATGCCCAACTTTTTAAAAAACAATAGTAATTTACATGTCATAATCACGTGAAACTACGAATTTGCCCTTCTTCCCGAGAATGAACACCGAAGAGTGAGAGAAAGGGAGAGATGAAAGCAATTTTTGAGAGAGAAGAGAACAAGAAGCGAGAGTAAGAGATAAAAAGAGTACTAAAGAAAGGGAAAGAGAAAGCGAGAGTGAGAAACTCGAATTTGACGTAAACCTCCTTTAGTCATTTCCCCCCAAATTTGGTTAATCCATCCGGCGGACCCAAAGAGTCAGAACCAAAGGAGCTTCCATGGCGGGAACGACCTAAAAGAAGTGAACTCACAATCGAAGAAACACTCAAGTAAAGAGAGGAAGAGAGATTTTCTTCTAAACCGACGTAGCGACTAGCGAGTAGAAATCAGCAATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGCGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGTTTTCTATGTTCTTATTCGTTTCGTTCCATTTCGGCCTCTTTAATTCCGCTTTCGTCATCACATTTTGGGATAGGATTTTGAATACTCTTTTCTTTCTCAAATATTACTGCGTTTGATCTCAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGGTTTAGCTTCTTTGCAATTTTTTCTTTTAACTGTCGTTCATCATTTACCTATTTCGTTTACTTCTCTTCCAACTTTTGATGTTTTGCATTTAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAGTCAGTCTTTAGTGGTTTATATATTCTTTCATTTGCATAAATACTCTAATGCACTTTACCTATTGAATTCGACGGTATAGAGAATGTAACTTAGCTTTAGTCGATAATGGGTAAACTTTATATACATTTGTACATGTATTGATCTTATTAATTCACCACTACACCCAAAAACTCAAAAACTTAAGTTGATTGATTAAGATAAATTTAGTATTTTTTTTTAGTATTTCTTTTAACTAATGGGAGGTAAGCAAACCTATCTTCATTCAGAGATAGGATCTCAGCAAAAGACTGAAACATGAATAATGATGCTTTCCCTCCCCCTTCTATTTTTGTTAACTTGTGCACATCAAAGGGTGGGTGACTATGGCTTGGACTAAAGTATTTTTTATTTTCCACTTTATTGGTCAACAGAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTAACTCTCTCCCTGGTTTCTTCATTGGTTGATGAAAAGAAACTAAAATTTTTAAGGATAAAACTAACAAGAGAAGTCCAATGCTTGGCCTCTGGTAACTTCCGATTATCTTACGTCATGATTCTATTGATATCATTTAGAGAAGAGAGAGCATGTGGAATCTTGAACTTCATATGGTATCATTTCGCATGTTCTTTTGGGAGGGAAAAATATAAATTAAAAAAAGAAATCAAACTACAGATTATTTTCAATGCCTTTTTATTGTTAATTATAGATCTACACCCAACGTAAATGAACCAGTTTCATATCTTGATTACAGTAGCAGGGTGTGACACATTCTTTTTGAGGAAGATCTGTAAGAATTAAATTTTGGAAAATTTATATTCTTGATCTTTTCAGGTACATAAGCTAGAGGGAAAGACCATCCCCATGACGCATATCTCATCTTTCATTGCCTTAGATTAATCACTTCCATTTATTTTCAGGTCTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTAATTCTAATGCTTCCCTTTAAGATATAGCATTCCAACTGTTTCGCACACTTAAATTCATCAATTTGACTTGTAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGGTCAATTTCATCCGCTAAATATTTTTTGCAGCATACTATAATCAGATTTTCATTGCACAGGGTGAAATCAATAATGCTTTTATGATTTAATCTATAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGATTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGTTAGTTTTTACTCTGCCTTGTAAGAACTGTAGTTCTTTGCAGAATTAGCTCATTAAGCCACATACAATTTCTTTAATGTTCTCCACAGTATAGAAAGGACAGGCTTTTGTTCTGATCTCTTTGCCTCATGATACCATTCTTCATGATGGACGTGGTGTAAATTCTCCTCTTATTTTTGTGATTATATCCTTGCATCTCTTATAGCACATTGGAATTGTTTTTGTAAATCATTTGACATGTTTTGTCATATTTTGTAATTTTATCTTATCAACGTAATGAGGATAATTAGTTCATTTAAAAAAAAAGATGGACGAATTGCATACTTTTCAAAAATATTTTCACAACAATCGAATTATCAGTAATTTATTTAAAAAGGCCAGACCACTGTGTTATTAAATATTGTTAAAGTATTCTTGTCCAAATTGTTAGTAGTCACAACATCCATATAGCACTAGGTATGTTGTGATAAATGCTTTATTTGGTGGTGGGGGGATTGATTTAATGAAAGCACACTTAAAAAATATGTTTGAAAATCATATGGAATTTAGTAATTAATGGTAGACAATTTTTTTTTTTTATTAATGTAGTGCACTCCTCATTTTTGCTGGAACATCATCCTGCTCTGGTGCTTTGGGATGTTCAGTTCTTTCCCATTCTAAATTTTAACTTGATTTGTTCATTGGAAATGAATGGTTGTACCTTTATTCTTGTCTATAGTTGGTTTAGTGCATCCCAATTTTATTGTACAATAGTTGGACTTGCAAACAGTTTGGGTTCGTTCCTCATGTCTACTTCTTGATACACTTAAGTTCATTTGGTTGTGGTCAGGTTTACTTACATTTTGACTAATCTCATGGGACAATTGTCTCTTTTTAAACATTTGGTTGTCAATAAACTCTCAAGATTGTAGTATTCTAAGTAGGTGGCCAACCTAGGATGGTTACACCTAGTTTCTTCTCATCAATTTCCTTCTCATAAATCATCAAATTTCATAATCTGATTTATTTGTTTCCCTGTGAGCTGAAAATTAGATGCCAAAACTTCTGATACTTCCCTGACACTGTCTCGCAAACTAGAAGTGTCACAGATTTATATTTGACTTTGTTATCAAGTTCTTTATATTATATTCAGTGATATCATATATATTATTTTTATGCTTGATTTACAGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACATTCTATGTTCCAACCATCCTCCACTTGATTAATTAAGTAGCTGATAAGCAATAGTTTTGGTGTGTACTAACCGGGTGTTCTGCTTAGAAAACATATTTTAGATGGTAACTGCCATGTACTTGACTTTCTTTAAAGGTATTTCAATGTCTTAACAGTTAGTTTATAATAGTCTAAAAGTACTTTAAAGTGCTGTTAAATATTTTTGGATTTCTTAA

mRNA sequence

ATGGAAAAAACACTAAACATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGACGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGGTGCGAGGCGATGTGCATCGATGGGACAAAGCGACTTTGCCATATCCGGGGGAAGATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATACTTGTGGGGCTTCGTGACTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGATGAAGCAAGGCTGTTGAAAGCATATGGTGAACTTCCAGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGCGCTGATGATTATCTTGAGTTTGAGGATGAAGATATCGACAAGATTTAGATTTCAAGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTCTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGATTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACATTCTATGTTCCAACCATCCTCCACTTGATTAATTAAGTAGCTGATAAGCAATAGTTTTGGTGTGTACTAACCGGGTGTTCTGCTTAGAAAACATATTTTAGATGGTAACTGCCATGTACTTGACTTTCTTTAAAGGTATTTCAATGTCTTAACAGTTAGTTTATAATAGTCTAAAAGTACTTTAAAGTGCTGTTAAATATTTTTGGATTTCTTAA

Coding sequence (CDS)

ATGGAAAAAACACTAAACATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGACGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGGTGCGAGGCGATGTGCATCGATGGGACAAAGCGACTTTGCCATATCCGGGGGAAGATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATACTTGTGGGGCTTCGTGACTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGATGAAGCAAGGCTGTTGAAAGCATATGGTGAACTTCCAGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGCGCTGATGATTATCTTGAGTTTGAGGATGAAGATATCGACAAGATTTAG

Protein sequence

MEKTLNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGIDDEDDGGADDYLEFEDEDIDKI
Homology
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BLAST of Clc07G15465 vs. NCBI nr
Match: XP_022145199.1 (eukaryotic translation initiation factor 1A [Momordica charantia] >XP_022956094.1 eukaryotic translation initiation factor 1A [Cucurbita moschata] >XP_022956095.1 eukaryotic translation initiation factor 1A [Cucurbita moschata] >XP_022979975.1 eukaryotic translation initiation factor 1A [Cucurbita maxima] >XP_022979976.1 eukaryotic translation initiation factor 1A [Cucurbita maxima] >XP_023527417.1 eukaryotic translation initiation factor 1A [Cucurbita pepo subsp. pepo] >XP_023527418.1 eukaryotic translation initiation factor 1A [Cucurbita pepo subsp. pepo] >XP_038902096.1 eukaryotic translation initiation factor 1A [Benincasa hispida] >XP_038902102.1 eukaryotic translation initiation factor 1A [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 3.9e-75
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGGADDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGADDYLEFEDEDIDKI 145

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BLAST of Clc07G15465 vs. NCBI nr
Match: KAG6570922.1 (hypothetical protein SDJN03_29837, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 5.1e-75
Identity = 144/150 (96.00%), Postives = 148/150 (98.67%), Query Frame = 0 

Query: 2   EKTLNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGT 61
           ++T NMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDG+
Sbjct: 199 KETANMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGS 258

Query: 62  KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRL 121
           KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE+TRL
Sbjct: 259 KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRL 318

Query: 122 NEGIAGGIDDEDDGGADDYLEFEDEDIDKI 152
           NEGIAGGIDDEDDGG DDYLEFEDEDIDKI
Sbjct: 319 NEGIAGGIDDEDDGGVDDYLEFEDEDIDKI 348

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BLAST of Clc07G15465 vs. NCBI nr
Match: XP_008457652.1 (PREDICTED: eukaryotic translation initiation factor 1A [Cucumis melo] >XP_008457653.1 PREDICTED: eukaryotic translation initiation factor 1A [Cucumis melo] >KAA0045698.1 eukaryotic translation initiation factor 1A [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGG DDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGGDDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. NCBI nr
Match: XP_022932723.1 (eukaryotic translation initiation factor 1A-like [Cucurbita moschata] >XP_022972115.1 eukaryotic translation initiation factor 1A-like [Cucurbita maxima] >XP_023540729.1 eukaryotic translation initiation factor 1A-like [Cucurbita pepo subsp. pepo] >XP_023540730.1 eukaryotic translation initiation factor 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 4.4e-74
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE+TRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGGADDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGADDYLEFEDEDIDKI 145

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BLAST of Clc07G15465 vs. NCBI nr
Match: XP_021280987.1 (eukaryotic translation initiation factor 1A [Herrania umbratica] >OMO64371.1 Translation initiation factor 1A (eIF-1A) [Corchorus capsularis] >OMP08574.1 Translation initiation factor 1A (eIF-1A) [Corchorus olitorius])

HSP 1 Score: 287.7 bits (735), Expect = 5.7e-74
Identity = 141/145 (97.24%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE+TRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGID+EDDGGADDY+EFEDEDIDKI
Sbjct: 121 GGIDEEDDGGADDYIEFEDEDIDKI 145

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BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match: P56331 (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia OX=3882 PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-69
Identity = 134/146 (91.78%), Postives = 141/146 (96.58%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADD+KRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGI- 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELP++TRLNEGI 
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIG 120

Query: 127 AGGIDDEDDGGADDYLEFEDEDIDKI 152
           AGG+D+E D  A+DY+EFEDEDIDKI
Sbjct: 121 AGGLDEEMD-TANDYIEFEDEDIDKI 145

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BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match: P47815 (Eukaryotic translation initiation factor 1A OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-64
Identity = 123/146 (84.25%), Postives = 135/146 (92.47%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADD+KRELVFKEDGQEYAQV RMLGNGRCEA+C+DGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP++ RLNEG+ 
Sbjct: 61  IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGV- 120

Query: 127 GGIDDEDDG-GADDYLEFEDEDIDKI 152
             +D  ++G G  DY++FEDEDIDKI
Sbjct: 121 -DVDGPEEGEGDSDYIQFEDEDIDKI 144

[Close]
BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match: P47813 (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens OX=9606 GN=EIF1AX PE=1 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51
Identity = 106/145 (73.10%), Postives = 118/145 (81.38%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNR+RGKNE + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1   MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE  ++NE   
Sbjct: 61  IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
            G  D+D+   DD +  +DEDID I
Sbjct: 121 FGPGDDDEIQFDD-IGDDDEDIDDI 144

[Close]
BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match: Q8BMJ3 (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51
Identity = 106/145 (73.10%), Postives = 118/145 (81.38%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNR+RGKNE + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1   MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE  ++NE   
Sbjct: 61  IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
            G  D+D+   DD +  +DEDID I
Sbjct: 121 FGPGDDDEIQFDD-IGDDDEDIDDI 144

[Close]
BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match: Q5RA42 (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii OX=9601 GN=EIF1AX PE=2 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51
Identity = 106/145 (73.10%), Postives = 118/145 (81.38%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNR+RGKNE + EKRELVFKEDGQEYAQV++MLGNGR EAMC DG KRLCH
Sbjct: 1   MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE  ++NE   
Sbjct: 61  IRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDT 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
            G  D+D+   DD +  +DEDID I
Sbjct: 121 FGPGDDDEIQFDD-IGDDDEDIDDI 144

[Close]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match: A0A6J1IS99 (Eukaryotic translation initiation factor 4C OS=Cucurbita maxima OX=3661 GN=LOC111479507 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGGADDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGADDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match: A0A6J1GY26 (Eukaryotic translation initiation factor 4C OS=Cucurbita moschata OX=3662 GN=LOC111457892 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGGADDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGADDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match: A0A6J1CUI5 (Eukaryotic translation initiation factor 4C OS=Momordica charantia OX=3673 GN=LOC111014705 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGGADDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGADDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match: A0A1S3C6N4 (Eukaryotic translation initiation factor 4C OS=Cucumis melo OX=3656 GN=LOC103497302 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.6e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGG DDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGGDDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match: A0A5A7TS70 (Eukaryotic translation initiation factor 4C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002160 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.6e-75
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           GGIDDEDDGG DDYLEFEDEDIDKI
Sbjct: 121 GGIDDEDDGGGDDYLEFEDEDIDKI 145

[Close]
BLAST of Clc07G15465 vs. TAIR 10
Match: AT2G04520.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-72
Identity = 131/145 (90.34%), Postives = 139/145 (95.86%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPE+TRLNEGI 
Sbjct: 61  IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           G ++D+DD   DDY+EFEDEDID+I
Sbjct: 121 GDLEDDDDNNDDDYVEFEDEDIDRI 145

[Close]
BLAST of Clc07G15465 vs. TAIR 10
Match: AT5G35680.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 264.2 bits (674), Expect = 6.3e-71
Identity = 129/145 (88.97%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPE+TRLNEGI 
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           G +DD+DD   +DY+EFEDEDID+I
Sbjct: 121 GDLDDDDDVVGEDYIEFEDEDIDRI 145

[Close]
BLAST of Clc07G15465 vs. TAIR 10
Match: AT5G35680.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 264.2 bits (674), Expect = 6.3e-71
Identity = 129/145 (88.97%), Postives = 137/145 (94.48%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPE+TRLNEGI 
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120

Query: 127 GGIDDEDDGGADDYLEFEDEDIDKI 152
           G +DD+DD   +DY+EFEDEDID+I
Sbjct: 121 GDLDDDDDVVGEDYIEFEDEDIDRI 145

[Close]
BLAST of Clc07G15465 vs. TAIR 10
Match: AT5G35680.3 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 244.2 bits (622), Expect = 6.7e-65
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 7   MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 66
           MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1   MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60

Query: 67  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIA 126
           IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPE+TRLNEGI 
Sbjct: 61  IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120

Query: 127 GGIDDEDD 135
           G +DD+DD
Sbjct: 121 GDLDDDDD 128

The following BLAST results are available for this feature:
BLAST of Clc07G15465 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145199.13.9e-75100.00eukaryotic translation initiation factor 1A [Momordica charantia] >XP_022956094.... [more]
KAG6570922.15.1e-7596.00hypothetical protein SDJN03_29837, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008457652.11.1e-7499.31PREDICTED: eukaryotic translation initiation factor 1A [Cucumis melo] >XP_008457... [more]
XP_022932723.14.4e-7498.62eukaryotic translation initiation factor 1A-like [Cucurbita moschata] >XP_022972... [more]
XP_021280987.15.7e-7497.24eukaryotic translation initiation factor 1A [Herrania umbratica] >OMO64371.1 Tra... [more]
BLAST of Clc07G15465 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P563314.4e-6991.78Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia OX=3882 PE=... [more]
P478151.5e-6484.25Eukaryotic translation initiation factor 1A OS=Triticum aestivum OX=4565 PE=1 SV... [more]
P478133.2e-5173.10Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens OX=96... [more]
Q8BMJ33.2e-5173.10Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10... [more]
Q5RA423.2e-5173.10Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii OX=96... [more]
BLAST of Clc07G15465 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IS991.9e-75100.00Eukaryotic translation initiation factor 4C OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GY261.9e-75100.00Eukaryotic translation initiation factor 4C OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1CUI51.9e-75100.00Eukaryotic translation initiation factor 4C OS=Momordica charantia OX=3673 GN=LO... [more]
A0A1S3C6N45.6e-7599.31Eukaryotic translation initiation factor 4C OS=Cucumis melo OX=3656 GN=LOC103497... [more]
A0A5A7TS705.6e-7599.31Eukaryotic translation initiation factor 4C OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Clc07G15465 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04520.11.5e-7290.34Nucleic acid-binding, OB-fold-like protein [more]
AT5G35680.16.3e-7188.97Nucleic acid-binding, OB-fold-like protein [more]
AT5G35680.26.3e-7188.97Nucleic acid-binding, OB-fold-like protein [more]
AT5G35680.36.7e-6592.19Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 34..116
e-value: 7.0E-49
score: 178.4
IPR001253Translation initiation factor 1A (eIF-1A)TIGRFAMTIGR00523TIGR00523coord: 20..116
e-value: 9.2E-35
score: 116.6
IPR001253Translation initiation factor 1A (eIF-1A)PANTHERPTHR21668EIF-1Acoord: 7..151
IPR001253Translation initiation factor 1A (eIF-1A)HAMAPMF_00216aIF_1Acoord: 22..116
score: 18.345238
IPR001253Translation initiation factor 1A (eIF-1A)CDDcd05793S1_IF1Acoord: 39..115
e-value: 4.08055E-42
score: 133.033
NoneNo IPR availableGENE3D2.40.50.140coord: 8..151
e-value: 7.1E-58
score: 196.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR21668:SF18EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKEcoord: 7..151
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 38..99
e-value: 5.2E-22
score: 77.4
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 28..102
score: 31.623802
IPR018104Translation initiation factor 1A (eIF-1A), conserved sitePROSITEPS01262IF1Acoord: 47..69
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 8..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc07G15465.1Clc07G15465.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding