Clc07G13150 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGACTTGAAGCATTATTATACATTGAATATGTGTATGAAAAAAAAGACAAATAGAGACAATTCAACATACTTTATGTGACATCTCATTGCTCCAAATCTTCAATAAATACAAACACTTCCACTCCCCACCAAACTGACCAAGCTCCAAAAAAGAAAGAAAGAAAAAAAAACTCCCTTTTGTCTTCTCTTCAAACCCCCAACCCTTCCACACAAAGCTAGCTTCCATAGCCTACGCATGGATGATTTGCTTTGGAATGGCTCTTGGAGTAAAGAAGAAGACAGCAGTTGTGAAGAAAGCGTATTCGTCTCCGATGACCCGAGTCAATTATCGAGTCCGCCATTACAAGAGCTTCAAACGGTGGCAAGAATGTTGGGGTTGCCGGAGGTCGATACTCCGGCGCCGGAGATGAGACGAGTAGAGAAATTGGTTAAGGATTCCAAGTTTTTATGTGAACGTGAAAATTCGTGGCCGGAGGGAGCTAGCACCGTTGAGGTTTTGGTCGAAGAGCTTGAAAATGACAAAGGTTTTAATTTGTATAAATTTTTTTCACCTTTTCCTTTTTTTTTTTTTTGGTTGGGACATCTTGCTTTAATTAAGAAGAAAATATTTCTCACACTTCAATTATAGATTCTTTTTCCTTTGACTTTTTAGCATTCTTGTTTTAATAATTTGTTATAGACATGAAAATCTCGTACTAAATCAAACTTTTTTTTGGTACAACGATTATAAAGATAAGGACTTGAATCTCCAACCTAAGGAGGGAGTATATACCAATACCATAGAGCTAAGCTCAATTTAGTTAGTAAATAGAATATTATAAAAGTTTTTATATTAAATTATATTTGATTTAAATGGTTGGAGATTCTACTTCATTTACGTTTTTCATGCATAAAATTCTTTTTTAATGAAAGTGCTTAAAACTTTAATAATAAAATTGGCATAAAGTATGACTTAACAACTAAAAATATATGATTAATTTTCACTCTTTATTGTACTCTATCTCTCTCTCTAAATGGACACTATAATATAACTTTTTTTTTTTTTTTTTCTAAGTTGGTTGTAGGTTTTGGATCTCTACTTCTATGCTTTTTATATATTATTTAAAATAAATAACATAATTAAACATTGAATTAAAATTCAACATATACTCTTTTGTGCTGAACAATATAGGAGAAGAATTATATTTGAAAAGCTGACATATGACGAAGATATATTATACTTTATCCAAAATGCGTTGACATGTTACTTTGTTTTTTAAAATATTAAATATAGTGTATTCCAACTTTATAATTACCTTAAATATTCTTCCACTTAAATACTGTAAATGTTATTCTAAATTCTTGTCATTCTAAATCCTTGTCATCTTTTATATATATACACCTTGTTGCTCACATAACATTTATATTATCAACTTTGAAGTAGGAAATTTAATTCTCTAAAAAAAAAATAAATGCACCATGCACTATTAAACTTATATAACCGTACAATAATTTAAGAGATTTTGGTTTATGTAGGAATTGCACCACAAGGTGGGTTTTTAGACATTGTCGAGAACCAAAAACCAAACCAACAAAACTCCATAATAGAAAAACAATCAAGCTCAGCCAACTTTACAGCTCCATCTCCATCTTTGTTGTCTTCAAACAACAACGAGATTCAACGGCCTGTTGATCGAGATCACGTCGTGTCACAAATGAAGGAATTGATATACTATGCGGCGGTGTTTAGACCGGTGAACTTGGGGTTGGAGACGGTGGAGAAGAAGATGAGGAGGAACACCAAAATGTCGAAGCAGCCTCAAACGATAGCGGCGAGAAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTTGAAGGCTTAAGCTACACAACTTGGCTCTATTGATTATTCTCTCAACTTGCACCTCTTTCAACCCTACTTTTCCCACACATGCTTATTTTCCTCTCTAAACGCTTTATCTATAATCTTATCAATAAATATTGAGTTTGTTAGTTCTTAAGAATAATTAGACTTTCCTAAGTATATGTTATCACATATTTTTTTCCTTTACATTTCTACATTTTTTT GAAGACTTGAAGCATTATTATACATTGAATATGTGTATGAAAAAAAAGACAAATAGAGACAATTCAACATACTTTATGTGACATCTCATTGCTCCAAATCTTCAATAAATACAAACACTTCCACTCCCCACCAAACTGACCAAGCTCCAAAAAAGAAAGAAAGAAAAAAAAACTCCCTTTTGTCTTCTCTTCAAACCCCCAACCCTTCCACACAAAGCTAGCTTCCATAGCCTACGCATGGATGATTTGCTTTGGAATGGCTCTTGGAGTAAAGAAGAAGACAGCAGTTGTGAAGAAAGCGTATTCGTCTCCGATGACCCGAGTCAATTATCGAGTCCGCCATTACAAGAGCTTCAAACGGTGGCAAGAATGTTGGGGTTGCCGGAGGTCGATACTCCGGCGCCGGAGATGAGACGAGTAGAGAAATTGGTTAAGGATTCCAAGTTTTTATGTGAACGTGAAAATTCGTGGCCGGAGGGAGCTAGCACCGTTGAGGTTTTGGTCGAAGAGCTTGAAAATGACAAAGGAATTGCACCACAAGGTGGGTTTTTAGACATTGTCGAGAACCAAAAACCAAACCAACAAAACTCCATAATAGAAAAACAATCAAGCTCAGCCAACTTTACAGCTCCATCTCCATCTTTGTTGTCTTCAAACAACAACGAGATTCAACGGCCTGTTGATCGAGATCACGTCGTGTCACAAATGAAGGAATTGATATACTATGCGGCGGTGTTTAGACCGGTGAACTTGGGGTTGGAGACGGTGGAGAAGAAGATGAGGAGGAACACCAAAATGTCGAAGCAGCCTCAAACGATAGCGGCGAGAAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTTGAAGGCTTAAGCTACACAACTTGGCTCTATTGATTATTCTCTCAACTTGCACCTCTTTCAACCCTACTTTTCCCACACATGCTTATTTTCCTCTCTAAACGCTTTATCTATAATCTTATCAATAAATATTGAGTTTGTTAGTTCTTAAGAATAATTAGACTTTCCTAAGTATATGTTATCACATATTTTTTTCCTTTACATTTCTACATTTTTTT ATGGATGATTTGCTTTGGAATGGCTCTTGGAGTAAAGAAGAAGACAGCAGTTGTGAAGAAAGCGTATTCGTCTCCGATGACCCGAGTCAATTATCGAGTCCGCCATTACAAGAGCTTCAAACGGTGGCAAGAATGTTGGGGTTGCCGGAGGTCGATACTCCGGCGCCGGAGATGAGACGAGTAGAGAAATTGGTTAAGGATTCCAAGTTTTTATGTGAACGTGAAAATTCGTGGCCGGAGGGAGCTAGCACCGTTGAGGTTTTGGTCGAAGAGCTTGAAAATGACAAAGGAATTGCACCACAAGGTGGGTTTTTAGACATTGTCGAGAACCAAAAACCAAACCAACAAAACTCCATAATAGAAAAACAATCAAGCTCAGCCAACTTTACAGCTCCATCTCCATCTTTGTTGTCTTCAAACAACAACGAGATTCAACGGCCTGTTGATCGAGATCACGTCGTGTCACAAATGAAGGAATTGATATACTATGCGGCGGTGTTTAGACCGGTGAACTTGGGGTTGGAGACGGTGGAGAAGAAGATGAGGAGGAACACCAAAATGTCGAAGCAGCCTCAAACGATAGCGGCGAGAAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTTGAAGGCTTAAGCTACACAACTTGGCTCTATTGA MDDLLWNGSWSKEEDSSCEESVFVSDDPSQLSSPPLQELQTVARMLGLPEVDTPAPEMRRVEKLVKDSKFLCERENSWPEGASTVEVLVEELENDKGIAPQGGFLDIVENQKPNQQNSIIEKQSSSANFTAPSPSLLSSNNNEIQRPVDRDHVVSQMKELIYYAAVFRPVNLGLETVEKKMRRNTKMSKQPQTIAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYTTWLY Homology
BLAST of Clc07G13150 vs. NCBI nr
Match: XP_038902463.1 (transcription factor bHLH87-like [Benincasa hispida]) HSP 1 Score: 371.7 bits (953), Expect = 5.0e-99 Identity = 201/250 (80.40%), Postives = 218/250 (87.20%), Query Frame = 0
BLAST of Clc07G13150 vs. NCBI nr
Match: XP_004146860.1 (transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein Csa_001182 [Cucumis sativus]) HSP 1 Score: 349.0 bits (894), Expect = 3.5e-92 Identity = 192/250 (76.80%), Postives = 209/250 (83.60%), Query Frame = 0
BLAST of Clc07G13150 vs. NCBI nr
Match: XP_008447580.1 (PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcription factor bHLH87-like [Cucumis melo var. makuwa] >TYK03801.1 transcription factor bHLH87-like [Cucumis melo var. makuwa]) HSP 1 Score: 329.3 bits (843), Expect = 2.9e-86 Identity = 184/250 (73.60%), Postives = 207/250 (82.80%), Query Frame = 0
BLAST of Clc07G13150 vs. NCBI nr
Match: XP_022148257.1 (transcription factor bHLH87-like [Momordica charantia]) HSP 1 Score: 296.6 bits (758), Expect = 2.1e-76 Identity = 170/260 (65.38%), Postives = 199/260 (76.54%), Query Frame = 0
BLAST of Clc07G13150 vs. NCBI nr
Match: XP_022980720.1 (transcription factor bHLH87-like [Cucurbita maxima]) HSP 1 Score: 266.5 bits (680), Expect = 2.3e-67 Identity = 156/248 (62.90%), Postives = 173/248 (69.76%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.0e-33 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.7e-23 Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22 Identity = 61/134 (45.52%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.0e-22 Identity = 58/114 (50.88%), Postives = 86/114 (75.44%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3) HSP 1 Score: 105.5 bits (262), Expect = 8.8e-22 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy TrEMBL
Match: A0A0A0LDH7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92 Identity = 192/250 (76.80%), Postives = 209/250 (83.60%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy TrEMBL
Match: A0A5D3BVP3 (Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001900 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86 Identity = 184/250 (73.60%), Postives = 207/250 (82.80%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy TrEMBL
Match: A0A1S3BIP2 (transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86 Identity = 184/250 (73.60%), Postives = 207/250 (82.80%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy TrEMBL
Match: A0A6J1D4K8 (transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 9.9e-77 Identity = 170/260 (65.38%), Postives = 199/260 (76.54%), Query Frame = 0
BLAST of Clc07G13150 vs. ExPASy TrEMBL
Match: A0A6J1IXB7 (transcription factor bHLH87-like OS=Cucurbita maxima OX=3661 GN=LOC111480004 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 1.1e-67 Identity = 156/248 (62.90%), Postives = 173/248 (69.76%), Query Frame = 0
BLAST of Clc07G13150 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 142.9 bits (359), Expect = 3.5e-34 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of Clc07G13150 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 108.6 bits (270), Expect = 7.4e-24 Identity = 61/134 (45.52%), Postives = 90/134 (67.16%), Query Frame = 0
BLAST of Clc07G13150 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.1e-23 Identity = 58/114 (50.88%), Postives = 86/114 (75.44%), Query Frame = 0
BLAST of Clc07G13150 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-23 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Clc07G13150 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 102.1 bits (253), Expect = 6.9e-22 Identity = 60/124 (48.39%), Postives = 84/124 (67.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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