Clc07G12830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G12830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	WD_REPEATS_REGION domain-containing protein
Location	ClcChr07: 27621591 .. 27625622 (-)
RNA-Seq Expression	Clc07G12830
Synteny	Clc07G12830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCCACCTCCAACAAACCGACCTCTGGACTTCCATGGAAGAACAAACAAAAAGCATCGACTTACCCCAAAACGCCGCCGTATTACCTGACCCCATTCACTTCCCTAATTCTCCCTCCAGACCCTCCGCCGCATCCGTCCCAACTCCATGGACCATGTCGCCAGCACCGCCGCCGACAAACCAGCAACCTTTTGTTTACCACTGCATAGCCTCACTCCACCGGCCGGACGGCAACATACTGTCGATTGCGATGACAAAGGAGTTCATATTCGTAGGGTCGGAGAGTGGGCAGATTCAGTCGTGGAAGCTACCAGATTGCCCCGGAGTTGGGTTCATAAAGGCTAGCTCCGGCCAAGTTGGGGCAATGTTTGCGTGTGGGAGGATGTTGTTTAGTTGTCATGGGGATCACAGAGTTCGAATTTGGGATGTGAAAATGGGAAATAAAAGATTGAAACCAAAAAAGATTTCAACTTTGCCACCGAAACGCTCGTTTTTGGTGGTGAGAAAGAGCAGCCGGCAGCTACAATATCATACAGATTTTATTTCTTGCTTGGCTTACAATGAAGCTGATAAGCTTCTCTATACAGGTAAAGTAGTTCCTTTGGTTGTTTGAAAGATTAAGATATATAGACTAAAATGGTTATATTATAAAAGTTGAAAGATGAAAATAATTTTATAGTATTAATTTTAACCTCTTTTAAAGATAAAACTGTGGAAAATATTTATAAATATATTAAGATGTAACTCTCTATCTGTGATAGATAGAGATAGACACTAATACATCTATCAATGTTTATCATTAATAGACAATGATAGATGATAGTAGTCTATCAGTATTTATCAATTATAGATATGATATTTTGTTATATATGTAAATATTTAGTTCATTTTGATATATTTAAGAACAAACCAATTTTAAATGTAGAATATTTTAATTTATTTTGATAGATGATAGTAGTCTAAATTTATGTATAATCTATATTTATCGTAGGATAAATGAATATATATATATATATATATATTAGAAGATAAAAAGAAATATATTATAAAATGTTAGTTTTGTATAACATGTATTGAGTTTCATATGTCTAATGTCTCTAAATTTTAATTTTTGAAATTAACAAATCATAAATAAATTAAATATATATCTAACCTCAACAAACAATTAATTGAGTATATGTGGATATGTCAACTAAATTTAGAGTGTCTTTGGTTAGTGATCTGAAAACCAACATAATTTTTTTTTAATCTTAAAATTTAAAAAAAAAATTAAGAAGGATATTTAATGAAAAACAAAGTTGTATTTTCTTTTTAGTATTTTCATGTACGTGGTTGGTGACTTAATTAGAAATTAGATTCCCAATTTAGTTAAACAATTGTCAAAAGGTATTTGATATAACGTAGTTATAAACCAGGCCATCTAAATAATTGTGGTTACCAAATGAATAGGATATGAAGTTGAATGATTGAATCTCAACTCTTATTAATTAATTAATGAAGATGTTTTATTCTACAAATTCTTTATAATTATTATTAACGAAATTAGGGATATTTTTAAATACAGTAAAATGGATCAAAATATTTATAAATATAGTAAAATTTTATTGTTTATCTAAAATAGACGGTGATATTTTGCTATTATCTGTAAATATTTTCAATAATATTGTTATTTAAAATGATTTTACTTCGTATATATTGCACACATCTTAATTTATCAATAATGAGATGATTTTATAATATATTATATCATATATCTAACCAATTTTTCTTTTATAATTTTTTATTTTAAAATTTAAAATTCAAAATCTAAATACAATTTTTTCTTTTTTTTTTCCTTTTTTTTTTTTTTTTTTTGCCATTTTTACGATTCAACAATTCAAAATAAATTTTCAACAGATTAGGAAAACATAAAACGGGAGGATTTAGATTATTGGTTTTAAATTAATTTTGTGTGGAAGATATATATACAAATGTGTAATATACTAAAGTTAATTATGTTAACATCAATTTTAAGTTTATTGATCATGAAGGTTCGTGGGATAGCACAGTGAAAGTTTGGAACATCTCAGAAAATCGATGTGTAGATTCATTTGTTGCTCACGCAGGCCATGTAAATGCAATCGTCATAAACCAAAAAGATGGCTGCGTTTTCACTTGCTCTTCTGATGGCTCTGTCAAGATATGGAGAAGGGTTTTTGGAGAAAGTTCCCATATTTTAACCATGATTCTCAAGTTTCAACTCTCCCCTGTCAATGCCCTGGCTCTAAGCGTCTCGTTGTCGTCATCATCGTCATCGTCGTTGAAACCTTACAACTTTCTCTACTCTGGCTCCTCGGACGGGCTCATCAACTTCTGGGAGAAGGAGAACTCCTCGAGTAGGTACTGTTAAATCACCTCTCAAACTAAGATTTAAGATTTTAGGCTTATGCCTAATATATATATATATATATATATATTTTTTTTTTTTTCTAATTAAACTTATAAATACTATTCTCATTGGCAAAATTTGAATATTAAAACAATATTTTTCTTATCAACTATATCCAATTATTATATTTTTTTTATTAAGAAATGTCAAATGAATCAAAGATTGACAACAAACACAAGTTAAAGAATTTATTTAGATAGGTATTAAAAAATTATGAACTAATTAGACACAACATCAAAAAGTTCAAAACTTTAGACTCCATTCAATAATTAATTTTGTCTTTTTTTTTCTTTTTTAAATTAAGCCTATAAACACCAATTTCATCTATTGATTTATATGCTAATTTGGTGTTTTCAAATTCCAAACTAAAGAAAAATAAAGTAGTTTTTAAAAGATTGTTTTTGTTTTTGGAATTATTTGACCAAGAATTCAAATGTCTACCTAGAAAATTTGAAAAACATGACTATTAAATTGTGAGAACAAGCACAATTTTAAAAGACTACCAATGCTACCGAATTTGATAACCATTTGGTTTTTTGAAAATTAACGCTATAAACACTATTTCATTTTTTAAGTGTTCATATTTTGTTATTCACTTTAACGTCTTTAAAAATCAAGCCAAGTTTTGAAAACCAACAAAAAAAAAAAAAAAAATAGTTTCCAAAAAGTAGGATAGTTTGGCTGACAATTTTAAAATAGAATTTTGGATACAATGGGTTCAATGAAAACAAAGAGTTTGTATTTCAAATTTTCAAATATGTGTTAGGTAGCAAATTTAGAAATTAAATTTCTAATTTGGTCAAATTTTCAAAATGAAATTGATAATATATTTATAAACCATAAAATTAATATAAATACTCATCAAATATTAGGTTGAATATAAATTATTACTAATTAATTTTTGACTTATTTTATGTTAAAAATTTTGCATAATTATTATTTTGTAACATACTATAATATAGAATATATTATATAATACATATATTTTAATATAATTTTGAGAATTTGTTCCATTTGGATGACAAATTCTAGAAATAACTTTAAAAAACAAAATCTAGATTGCATACCAAAAGCAAATTTGCTAAAACCAATAAATTCCGAAAACATAGAATCTAAATTCAAAAAGAGAAAATAAAAAATGAAATCACTTAATACTACAAAGAAAATTAAACCCATTTATGTTGGCTCAGGTACAAGCATGGAGGGTTGCTACAAGGTCATCAGTTTGGAGTTGGATGCTTAGTAACAATAAAGGAGTTGATTGTGAGTGGGTCTGAAGACACGGCCATTAGGGTTTGGAGAAGAGAGGAAATAGGGAATAATGGGTTCGTTCATTGCTGCGTTTCAGTGATCGAGGGCCACCACGGGCCAGTCAGGTGCTTGGCGGCGGCCATGGAGATTGATAATAATATGGGGAATATGTTGGTTTGCAGTGCTAGTTTGGATCAGACTTTTAAGGTATGGAGAGTCAAGCTGAAGAAGGAGATTGTTGGAATATCTCAAATAATCAATAACAACAACAATAATAATCCTGTTCTTTCACCTTCTTGGGTGGAGAAGAGGAAGCTTCAAGGGAATGATTATTATTATTCTATCTAA

mRNA sequence

ATGGAATTCCACCTCCAACAAACCGACCTCTGGACTTCCATGGAAGAACAAACAAAAAGCATCGACTTACCCCAAAACGCCGCCGTATTACCTGACCCCATTCACTTCCCTAATTCTCCCTCCAGACCCTCCGCCGCATCCGTCCCAACTCCATGGACCATGTCGCCAGCACCGCCGCCGACAAACCAGCAACCTTTTGTTTACCACTGCATAGCCTCACTCCACCGGCCGGACGGCAACATACTGTCGATTGCGATGACAAAGGAGTTCATATTCGTAGGGTCGGAGAGTGGGCAGATTCAGTCGTGGAAGCTACCAGATTGCCCCGGAGTTGGGTTCATAAAGGCTAGCTCCGGCCAAGTTGGGGCAATGTTTGCGTGTGGGAGGATGTTGTTTAGTTGTCATGGGGATCACAGAGTTCGAATTTGGGATGTGAAAATGGGAAATAAAAGATTGAAACCAAAAAAGATTTCAACTTTGCCACCGAAACGCTCGTTTTTGGTGGTGAGAAAGAGCAGCCGGCAGCTACAATATCATACAGATTTTATTTCTTGCTTGGCTTACAATGAAGCTGATAAGCTTCTCTATACAGGTTCGTGGGATAGCACAGTGAAAGTTTGGAACATCTCAGAAAATCGATGTGTAGATTCATTTGTTGCTCACGCAGGCCATGTAAATGCAATCGTCATAAACCAAAAAGATGGCTGCGTTTTCACTTGCTCTTCTGATGGCTCTGTCAAGATATGGAGAAGGGTTTTTGGAGAAAGTTCCCATATTTTAACCATGATTCTCAAGTTTCAACTCTCCCCTGTCAATGCCCTGGCTCTAAGCGTCTCGTTGTCGTCATCATCGTCATCGTCGTTGAAACCTTACAACTTTCTCTACTCTGGCTCCTCGGACGGGCTCATCAACTTCTGGGAGAAGGAGAACTCCTCGAGTAGGTACAAGCATGGAGGGTTGCTACAAGGTCATCAGTTTGGAGTTGGATGCTTAGTAACAATAAAGGAGTTGATTGTGAGTGGGTCTGAAGACACGGCCATTAGGGTTTGGAGAAGAGAGGAAATAGGGAATAATGGGTTCGTTCATTGCTGCGTTTCAGTGATCGAGGGCCACCACGGGCCAGTCAGGTGCTTGGCGGCGGCCATGGAGATTGATAATAATATGGGGAATATGTTGGTTTGCAGTGCTAGTTTGGATCAGACTTTTAAGGTATGGAGAGTCAAGCTGAAGAAGGAGATTGTTGGAATATCTCAAATAATCAATAACAACAACAATAATAATCCTGTTCTTTCACCTTCTTGGGTGGAGAAGAGGAAGCTTCAAGGGAATGATTATTATTATTCTATCTAA

Coding sequence (CDS)

ATGGAATTCCACCTCCAACAAACCGACCTCTGGACTTCCATGGAAGAACAAACAAAAAGCATCGACTTACCCCAAAACGCCGCCGTATTACCTGACCCCATTCACTTCCCTAATTCTCCCTCCAGACCCTCCGCCGCATCCGTCCCAACTCCATGGACCATGTCGCCAGCACCGCCGCCGACAAACCAGCAACCTTTTGTTTACCACTGCATAGCCTCACTCCACCGGCCGGACGGCAACATACTGTCGATTGCGATGACAAAGGAGTTCATATTCGTAGGGTCGGAGAGTGGGCAGATTCAGTCGTGGAAGCTACCAGATTGCCCCGGAGTTGGGTTCATAAAGGCTAGCTCCGGCCAAGTTGGGGCAATGTTTGCGTGTGGGAGGATGTTGTTTAGTTGTCATGGGGATCACAGAGTTCGAATTTGGGATGTGAAAATGGGAAATAAAAGATTGAAACCAAAAAAGATTTCAACTTTGCCACCGAAACGCTCGTTTTTGGTGGTGAGAAAGAGCAGCCGGCAGCTACAATATCATACAGATTTTATTTCTTGCTTGGCTTACAATGAAGCTGATAAGCTTCTCTATACAGGTTCGTGGGATAGCACAGTGAAAGTTTGGAACATCTCAGAAAATCGATGTGTAGATTCATTTGTTGCTCACGCAGGCCATGTAAATGCAATCGTCATAAACCAAAAAGATGGCTGCGTTTTCACTTGCTCTTCTGATGGCTCTGTCAAGATATGGAGAAGGGTTTTTGGAGAAAGTTCCCATATTTTAACCATGATTCTCAAGTTTCAACTCTCCCCTGTCAATGCCCTGGCTCTAAGCGTCTCGTTGTCGTCATCATCGTCATCGTCGTTGAAACCTTACAACTTTCTCTACTCTGGCTCCTCGGACGGGCTCATCAACTTCTGGGAGAAGGAGAACTCCTCGAGTAGGTACAAGCATGGAGGGTTGCTACAAGGTCATCAGTTTGGAGTTGGATGCTTAGTAACAATAAAGGAGTTGATTGTGAGTGGGTCTGAAGACACGGCCATTAGGGTTTGGAGAAGAGAGGAAATAGGGAATAATGGGTTCGTTCATTGCTGCGTTTCAGTGATCGAGGGCCACCACGGGCCAGTCAGGTGCTTGGCGGCGGCCATGGAGATTGATAATAATATGGGGAATATGTTGGTTTGCAGTGCTAGTTTGGATCAGACTTTTAAGGTATGGAGAGTCAAGCTGAAGAAGGAGATTGTTGGAATATCTCAAATAATCAATAACAACAACAATAATAATCCTGTTCTTTCACCTTCTTGGGTGGAGAAGAGGAAGCTTCAAGGGAATGATTATTATTATTCTATCTAA

Protein sequence

MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVKLKKEIVGISQIINNNNNNNPVLSPSWVEKRKLQGNDYYYSI

Homology

[Close]

BLAST of Clc07G12830 vs. NCBI nr
Match: XP_038882793.1 (protein JINGUBANG-like [Benincasa hispida])

HSP 1 Score: 808.5 bits (2087), Expect = 2.9e-230
Identity = 405/455 (89.01%), Postives = 423/455 (92.97%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQ+AAVLPDPIHFPNSPSRPSAASVPTPW MSPA  P
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQDAAVLPDPIHFPNSPSRPSAASVPTPWAMSPA--P 60

Query: 61  TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQ 120
           TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESG+IQSWKLP+CPGVGFIKASSG+
Sbjct: 61  TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGRIQSWKLPECPGVGFIKASSGR 120

Query: 121 VGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHT 180
           VGAMF CGRMLFSCHGD+RVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQ+QYHT
Sbjct: 121 VGAMFGCGRMLFSCHGDYRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQMQYHT 180

Query: 181 DFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTC 240
           DFISCLAYN+ADKLLYTGSWDSTVK WNISENRCVDSFVAH GHVNAIVINQ+DGCVFTC
Sbjct: 181 DFISCLAYNDADKLLYTGSWDSTVKAWNISENRCVDSFVAHEGHVNAIVINQEDGCVFTC 240

Query: 241 SSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSD 300
           SSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS++ SS S  SLKPYNFLYSGSSD
Sbjct: 241 SSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLT-SSPSPPSLKPYNFLYSGSSD 300

Query: 301 GLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGF 360
           GLINFWEKE+SSSRY HGG LQGH FGV CLVT+K LI+SGSEDTAIR+WRREEIG NGF
Sbjct: 301 GLINFWEKESSSSRYNHGGFLQGHHFGVLCLVTVKNLILSGSEDTAIRIWRREEIG-NGF 360

Query: 361 VHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK-----LKKEIVG 420
           VH CVSVIEGHHGPVRCLAAAME+D NMGNMLVCSASLDQTFK+WRVK     LKKEIV 
Sbjct: 361 VHSCVSVIEGHHGPVRCLAAAMEVD-NMGNMLVCSASLDQTFKIWRVKLNVEHLKKEIVR 420

Query: 421 ISQIINNNNNNNPVLSPSWVEKRK-LQGNDYYYSI 450
                 NNNN+NPVLSPSWVEKRK LQG+DYYY I
Sbjct: 421 ----CENNNNHNPVLSPSWVEKRKQLQGDDYYYCI 446

[Close]

BLAST of Clc07G12830 vs. NCBI nr
Match: XP_008447531.1 (PREDICTED: lissencephaly-1 homolog [Cucumis melo])

HSP 1 Score: 778.9 bits (2010), Expect = 2.4e-221
Identity = 389/453 (85.87%), Postives = 410/453 (90.51%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRPSAASVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRPSAASVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q FVYHCIASLHRPDGNILSIAMTKEFIF GSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFVYHCIASLHRPDGNILSIAMTKEFIFAGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSFVAH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFVAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLVT+K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVTVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK-----LKKEIV 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K     LKKEIV
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQLKKEIV 420

Query: 421 GISQIINNNNNNNPVLSPSWVEKRKLQGNDYYY 448
            I        N+NPVLSPSWVEKRKLQG+DYYY
Sbjct: 421 EIC------GNHNPVLSPSWVEKRKLQGDDYYY 445

[Close]

BLAST of Clc07G12830 vs. NCBI nr
Match: XP_004151383.1 (protein JINGUBANG isoform X1 [Cucumis sativus] >KGN58050.1 hypothetical protein Csa_010389 [Cucumis sativus])

HSP 1 Score: 765.8 bits (1976), Expect = 2.1e-217
Identity = 383/456 (83.99%), Postives = 407/456 (89.25%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRP   SVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRP---SVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q F+YHCIASLHRPDGNILSIAMTKEFIFVGSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFIYHCIASLHRPDGNILSIAMTKEFIFVGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSF+AH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFIAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLV +K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVAVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK------LKKEI 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K      LKKEI
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQSLKKEI 420

Query: 421 VGISQIINNNNNNNPVLSPSWVEKRKLQGNDYYYSI 450
             I        N+NPVLSPSWVEKRKLQG++YYY I
Sbjct: 421 AEIC------GNHNPVLSPSWVEKRKLQGDEYYYCI 445

[Close]

BLAST of Clc07G12830 vs. NCBI nr
Match: KAA0050810.1 (lissencephaly-1-like protein [Cucumis melo var. makuwa] >TYK08535.1 lissencephaly-1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 756.1 bits (1951), Expect = 1.7e-214
Identity = 379/443 (85.55%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRPSAASVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRPSAASVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q FVYHCIASLHRPDGNILSIAMTKEFIF GSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFVYHCIASLHRPDGNILSIAMTKEFIFAGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSFVAH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFVAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLVT+K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVTVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK-----LKKEIV 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K     LKKEIV
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQLKKEIV 420

Query: 421 GISQIINNNNNNNPVLSPSWVEK 438
            I        N+NPVLSPSWV K
Sbjct: 421 EIC------GNHNPVLSPSWVGK 435

[Close]

BLAST of Clc07G12830 vs. NCBI nr
Match: XP_023526893.1 (protein JINGUBANG-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719.2 bits (1855), Expect = 2.3e-203
Identity = 364/458 (79.48%), Postives = 394/458 (86.03%), Query Frame = 0


Query: 7   QTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPF 66
           ++ LWTS+EEQTKSIDLPQN AVLPDPI FP SP+RPS+ASVPTPW MS +PP TNQQPF
Sbjct: 2   ESHLWTSIEEQTKSIDLPQNDAVLPDPILFPTSPARPSSASVPTPWAMS-SPPRTNQQPF 61

Query: 67  VYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFA 126
           VYHCIASLHRPDGNILSIAMTKEFI+VGSESG+IQSWKLP+CPGVGFIKASSGQVGAMFA
Sbjct: 62  VYHCIASLHRPDGNILSIAMTKEFIYVGSESGRIQSWKLPECPGVGFIKASSGQVGAMFA 121

Query: 127 CGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHTDFISCL 186
           CGRMLFS HGD+RVRIW+VKMGNKRLKPKKISTLPPKRS  VVR   RQLQ H+D ISCL
Sbjct: 122 CGRMLFSSHGDYRVRIWEVKMGNKRLKPKKISTLPPKRSLFVVRNGRRQLQQHSDHISCL 181

Query: 187 AYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSV 246
           AYN++DKLLYTGSWDS VK WNISENRCVDSFVAH GHVNAIVINQ+DGCVFTCSSD SV
Sbjct: 182 AYNDSDKLLYTGSWDSRVKAWNISENRCVDSFVAHEGHVNAIVINQEDGCVFTCSSDTSV 241

Query: 247 KIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFW 306
           KIWRRV+GESSHILTMILKFQLSPVNALALS+     SSSS KP NFLYSG SDG INFW
Sbjct: 242 KIWRRVYGESSHILTMILKFQLSPVNALALSL----PSSSSSKPCNFLYSGYSDGHINFW 301

Query: 307 EKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVS 366
           EKE+SSSRY HGGLLQGH F V CLVT+K+LI+SGSEDTAIR+WRRE  G NG+VH C+S
Sbjct: 302 EKESSSSRYNHGGLLQGHHFAVLCLVTVKDLILSGSEDTAIRIWRREGRG-NGYVHWCLS 361

Query: 367 VIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK----------------LK 426
           VIEGHHGPVRCLAA ME+D NMGNMLVCSASLDQ+FKVWRVK                LK
Sbjct: 362 VIEGHHGPVRCLAAGMEMD-NMGNMLVCSASLDQSFKVWRVKLFPPPVMNRSEMNVEQLK 421

Query: 427 KEIVGISQIINNNNNNNPVLSPSWVEKRKLQGNDYYYS 449
           KEIVG  ++      NNPVLSPSWV+KRKLQ +DYY S
Sbjct: 422 KEIVGCDEM------NNPVLSPSWVQKRKLQFDDYYVS 446

[Close]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot
Match: O48716 (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.3e-54
Identity = 140/392 (35.71%), Postives = 210/392 (53.57%), Query Frame = 0


Query: 32  DPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPFVYHCIASLHRPDGNILSIAMTKEFI 91
           D +    SP   S  +  TP+T +         P     I SL R +G+I S+A TK+ +
Sbjct: 51  DRMSCEGSPMMMSPWNQATPFTQTQWSTVEENLP-QNGLIGSLVREEGHIYSLAATKDLL 110

Query: 92  FVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFACGRMLFSCHGDHRVRIWDVKMGNKR 151
           + GS+S  I+ WK  +       K +SG V A+   G  +F+ H D ++R+W V   N+ 
Sbjct: 111 YTGSDSKNIRVWK--NLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQS 170

Query: 152 LKPKKISTLP----------PKRSFLVVRKSSRQLQY-HTDFISCLAYNEADKLLYTGSW 211
           L  K+  TLP            R+++ V+K    L   H D +SCL+ N+   LLY+ SW
Sbjct: 171 LH-KRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASW 230

Query: 212 DSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKIWRR--VFGESSH 271
           D T+KVW I++++C++S  AH   VN+ V++  +  VF+ S+DG+VK W+R      + H
Sbjct: 231 DRTIKVWRIADSKCLESIPAHDDAVNS-VVSTTEAIVFSGSADGTVKAWKRDQQGKYTKH 290

Query: 272 ILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFWEKENSSSRYKHG 331
            L   L  Q S V ALA+S + ++           +Y GSSDGL+NFWE+E    +  +G
Sbjct: 291 TLMQTLTKQESAVTALAVSKNGAA-----------VYFGSSDGLVNFWERE---KQLNYG 350

Query: 332 GLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVSVIEGHHGPVRCL 391
           G+L+GH+  V CL     L+ SGS D  I VW+R+     G +H C+SV+ GH GPV+CL
Sbjct: 351 GILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRD-----GNIHTCLSVLTGHTGPVKCL 410

Query: 392 AAAME---IDNNMGNMLVCSASLDQTFKVWRV 408
           A   +    +      +V S SLD++ KVW V
Sbjct: 411 AVEADREASERRDKKWIVYSGSLDKSVKVWGV 418

[Close]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot
Match: A0A2R8QFQ6 (F-box and WD repeat domain-containing 11-A OS=Danio rerio OX=7955 GN=fbxw11a PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17
Identity = 67/229 (29.26%), Postives = 104/229 (45.41%), Query Frame = 0


Query: 179 HTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQK--DGC 238
           HT  + CL Y+E  +++ TGS DSTV+VW++S    +++ + H    N  V++ +  +G 
Sbjct: 299 HTGSVLCLQYDE--RVIVTGSSDSTVRVWDVSSGEVLNTLIHH----NEAVLHLRFCNGL 358

Query: 239 VFTCSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYS 298
           + TCS D S+ +W  +   +   L  +L    + VN +                  ++ S
Sbjct: 359 MVTCSKDRSIAVW-DMASATDISLRRVLVGHRAAVNVVDFD-------------DKYIVS 418

Query: 299 GSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIG 358
            S D  I  W    S+S  +    L GH+ G+ CL     L+VSGS D  IR+W  E   
Sbjct: 419 ASGDRTIKVW----STSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE--- 478

Query: 359 NNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVW 406
                  C+ V+EGH   VRC+           N  + S + D   KVW
Sbjct: 479 ----CGACLRVLEGHEELVRCI--------RFDNKRIVSGAYDGKIKVW 488

[Close]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot
Match: Q91854 (Beta-TrCP OS=Xenopus laevis OX=8355 GN=fbxw1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.8e-17
Identity = 67/232 (28.88%), Postives = 104/232 (44.83%), Query Frame = 0


Query: 174 RQLQYHTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQK 233
           R L  HT  + CL Y+E  +++ TGS DSTV+VW+++    +++ + H   V  +  N  
Sbjct: 266 RVLMGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-- 325

Query: 234 DGCVFTCSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNF 293
           +G + TCS D S+ +W  +   +   L  +L    + VN +                  +
Sbjct: 326 NGMMVTCSKDRSIAVW-DMASATDITLRRVLVGHRAAVNVVDFD-------------DKY 385

Query: 294 LYSGSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRRE 353
           + S S D  I  W    ++S  +    L GH+ G+ CL     L+VSGS D  IR+W  E
Sbjct: 386 IVSASGDRTIKVW----NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 445

Query: 354 EIGNNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVW 406
                     C+ V+EGH   VRC+           N  + S + D   KVW
Sbjct: 446 -------CGACLRVLEGHEELVRCI--------RFDNKRIVSGAYDGKIKVW 460

[Close]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot
Match: Q3ULA2 (F-box/WD repeat-containing protein 1A OS=Mus musculus OX=10090 GN=Btrc PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-17
Identity = 74/271 (27.31%), Postives = 117/271 (43.17%), Query Frame = 0


Query: 137 DHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHTDFISCLAYNEADKLLY 196
           D+ ++IWD             STL  KR           L  HT  + CL Y+E  +++ 
Sbjct: 322 DNTIKIWDK------------STLECKRI----------LTGHTGSVLCLQYDE--RVII 381

Query: 197 TGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKIWRRVFGES 256
           TGS DSTV+VW+++    +++ + H   V  +  N  +G + TCS D S+ +W       
Sbjct: 382 TGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWD------ 441

Query: 257 SHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYN--FLYSGSSDGLINFWEKENSSSR 316
                       SP +     V +   ++ ++  ++  ++ S S D  I  W    ++S 
Sbjct: 442 ----------MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW----NTST 501

Query: 317 YKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVSVIEGHHGP 376
            +    L GH+ G+ CL     L+VSGS D  IR+W  E          C+ V+EGH   
Sbjct: 502 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE-------CGACLRVLEGHEEL 531

Query: 377 VRCLAAAMEIDNNMGNMLVCSASLDQTFKVW 406
           VRC+           N  + S + D   KVW
Sbjct: 562 VRCI--------RFDNKRIVSGAYDGKIKVW 531

[Close]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot
Match: Q9UKB1 (F-box/WD repeat-containing protein 11 OS=Homo sapiens OX=9606 GN=FBXW11 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.0e-17
Identity = 65/227 (28.63%), Postives = 102/227 (44.93%), Query Frame = 0


Query: 179 HTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVF 238
           HT  + CL Y+E  +++ TGS DSTV+VW+++    +++ + H   V  + +   +G + 
Sbjct: 279 HTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMV 338

Query: 239 TCSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGS 298
           TCS D S+ +W  +   +   L  +L    + VN +                  ++ S S
Sbjct: 339 TCSKDRSIAVW-DMASATDITLRRVLVGHRAAVNVVDFD-------------DKYIVSAS 398

Query: 299 SDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNN 358
            D  I  W    S+S  +    L GH+ G+ CL     L+VSGS D  IR+W  E     
Sbjct: 399 GDRTIKVW----STSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE----- 458

Query: 359 GFVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVW 406
                C+ V+EGH   VRC+           N  + S + D   KVW
Sbjct: 459 --CGACLRVLEGHEELVRCI--------RFDNKRIVSGAYDGKIKVW 468

[Close]

BLAST of Clc07G12830 vs. ExPASy TrEMBL
Match: A0A1S3BIJ7 (lissencephaly-1 homolog OS=Cucumis melo OX=3656 GN=LOC103489957 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.2e-221
Identity = 389/453 (85.87%), Postives = 410/453 (90.51%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRPSAASVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRPSAASVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q FVYHCIASLHRPDGNILSIAMTKEFIF GSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFVYHCIASLHRPDGNILSIAMTKEFIFAGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSFVAH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFVAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLVT+K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVTVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK-----LKKEIV 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K     LKKEIV
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQLKKEIV 420

Query: 421 GISQIINNNNNNNPVLSPSWVEKRKLQGNDYYY 448
            I        N+NPVLSPSWVEKRKLQG+DYYY
Sbjct: 421 EIC------GNHNPVLSPSWVEKRKLQGDDYYY 445

[Close]

BLAST of Clc07G12830 vs. ExPASy TrEMBL
Match: A0A0A0L804 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G464690 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 1.0e-217
Identity = 383/456 (83.99%), Postives = 407/456 (89.25%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRP   SVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRP---SVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q F+YHCIASLHRPDGNILSIAMTKEFIFVGSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFIYHCIASLHRPDGNILSIAMTKEFIFVGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSF+AH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFIAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLV +K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVAVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK------LKKEI 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K      LKKEI
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQSLKKEI 420

Query: 421 VGISQIINNNNNNNPVLSPSWVEKRKLQGNDYYYSI 450
             I        N+NPVLSPSWVEKRKLQG++YYY I
Sbjct: 421 AEIC------GNHNPVLSPSWVEKRKLQGDEYYYCI 445

[Close]

BLAST of Clc07G12830 vs. ExPASy TrEMBL
Match: A0A5A7U6L3 (Lissencephaly-1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00730 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 8.1e-215
Identity = 379/443 (85.55%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPP 60
           MEFHLQQTDLWTSMEEQTKSIDLPQN AVLPDPIHFPNSPSRPSAASVP PW MSPAPPP
Sbjct: 1   MEFHLQQTDLWTSMEEQTKSIDLPQNTAVLPDPIHFPNSPSRPSAASVPAPWAMSPAPPP 60

Query: 61  -TNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSG 120
            TN Q FVYHCIASLHRPDGNILSIAMTKEFIF GSESG+I+SWKLP+C GVGFIKA SG
Sbjct: 61  STNHQHFVYHCIASLHRPDGNILSIAMTKEFIFAGSESGRIESWKLPECTGVGFIKARSG 120

Query: 121 QVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYH 180
           +VGAMF  GRM+FSCHGD+RVRIW+VKMGNKRLK KKISTLP KRSFLVVRKSSR+LQYH
Sbjct: 121 EVGAMFGSGRMVFSCHGDYRVRIWEVKMGNKRLKAKKISTLPSKRSFLVVRKSSRRLQYH 180

Query: 181 TDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFT 240
           TD ISCLAYN+ADKLLYTGSWDSTVK W ISENRCVDSFVAH GHVNAI+INQ+DGCVFT
Sbjct: 181 TDCISCLAYNDADKLLYTGSWDSTVKAWKISENRCVDSFVAHEGHVNAILINQEDGCVFT 240

Query: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSS 300
           CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALS+S S SSSSSLKPYNFLYSGSS
Sbjct: 241 CSSDGSVKIWRRVFGESSHILTMILKFQLSPVNALALSLS-SFSSSSSLKPYNFLYSGSS 300

Query: 301 DGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNG 360
           DGLINFWEKE+SSSRY HGG LQGH FGV CLVT+K+LI+SGSEDT IRVWRREEIGNN 
Sbjct: 301 DGLINFWEKESSSSRYNHGGFLQGHHFGVLCLVTVKDLILSGSEDTTIRVWRREEIGNNE 360

Query: 361 FVHCCVSVIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVK-----LKKEIV 420
           FVH C+SVIEGHHGPVRCLAAA E+D NMGNMLVCS SLDQTFKVWR+K     LKKEIV
Sbjct: 361 FVHSCISVIEGHHGPVRCLAAATEMD-NMGNMLVCSGSLDQTFKVWRLKLFAPQLKKEIV 420

Query: 421 GISQIINNNNNNNPVLSPSWVEK 438
            I        N+NPVLSPSWV K
Sbjct: 421 EIC------GNHNPVLSPSWVGK 435

[Close]

BLAST of Clc07G12830 vs. ExPASy TrEMBL
Match: A0A6J1GYJ3 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111458017 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.8e-201
Identity = 357/451 (79.16%), Postives = 391/451 (86.70%), Query Frame = 0


Query: 7   QTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPF 66
           ++ LWTS+EEQTKSIDLPQN AVLPDPI FP SP+RPS+ASVP PW MS +PP TNQQPF
Sbjct: 2   ESHLWTSIEEQTKSIDLPQNDAVLPDPILFPTSPARPSSASVPIPWAMS-SPPRTNQQPF 61

Query: 67  VYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFA 126
           VYHCIASLHRP+GNILSIAMTKEFI+VGSESG+IQSWKLP+CPGVGFIKASSGQVGAMFA
Sbjct: 62  VYHCIASLHRPEGNILSIAMTKEFIYVGSESGRIQSWKLPECPGVGFIKASSGQVGAMFA 121

Query: 127 CGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHTDFISCL 186
           CGRM+FS HGD+RVRIW+VKMGNKRLKPKKISTLPPKRS  VVR   RQLQ H+D ISCL
Sbjct: 122 CGRMVFSSHGDYRVRIWEVKMGNKRLKPKKISTLPPKRSLFVVRNGRRQLQQHSDHISCL 181

Query: 187 AYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSV 246
           AYN++DKLLYTGSWDSTVK WNISENRCVDSFVAH GHVNAIVINQ+DGCVFTCSSD SV
Sbjct: 182 AYNDSDKLLYTGSWDSTVKAWNISENRCVDSFVAHEGHVNAIVINQEDGCVFTCSSDTSV 241

Query: 247 KIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFW 306
           KIWRRV+GESSHILTMILKFQLSPVNALALS+       SS KP NFLYSG SDG INFW
Sbjct: 242 KIWRRVYGESSHILTMILKFQLSPVNALALSL------PSSSKPCNFLYSGYSDGHINFW 301

Query: 307 EKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVS 366
           EKE+SSSRY HGGLLQGH F V CLVT+K+LI+SGSEDTAIR+W+REE G NG+VH C+S
Sbjct: 302 EKESSSSRYNHGGLLQGHHFAVLCLVTVKDLILSGSEDTAIRIWKREERG-NGYVHWCIS 361

Query: 367 VIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVKL------KKEIVGISQI- 426
           VIEGHHGPVRCLAA ME+D NMGNMLVCSASLDQ+FKVWRVKL       +  + + Q+ 
Sbjct: 362 VIEGHHGPVRCLAAGMEMD-NMGNMLVCSASLDQSFKVWRVKLFPPPAMNRSEMNVEQLR 421

Query: 427 --INNNNNNNPVLSPSWVEKRKLQGNDYYYS 449
             I     NNPVLSPSWVEKRKLQ +DYY S
Sbjct: 422 KEIGGCEMNNPVLSPSWVEKRKLQFDDYYVS 443

[Close]

BLAST of Clc07G12830 vs. ExPASy TrEMBL
Match: A0A6J1IWL1 (protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111479229 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.9e-200
Identity = 359/451 (79.60%), Postives = 390/451 (86.47%), Query Frame = 0


Query: 7   QTDLWTSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPF 66
           ++ LWTS+ EQTKSIDLPQN AVLPDPI FP SP+RPS+A VPTPW MS +PP TNQQPF
Sbjct: 2   ESHLWTSIGEQTKSIDLPQNDAVLPDPILFPTSPARPSSAPVPTPWAMS-SPPRTNQQPF 61

Query: 67  VYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFA 126
           VYHCIASLHRPDGNILSIAMTKEFI+VGSESG+IQSWKL +CPGVGFIKASSGQVGAMFA
Sbjct: 62  VYHCIASLHRPDGNILSIAMTKEFIYVGSESGRIQSWKLQECPGVGFIKASSGQVGAMFA 121

Query: 127 CGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRSFLVVRKSSRQLQYHTDFISCL 186
           CGRMLFS HGD+RVRIW+VKMGNKRLKPKKISTLPPKRS  V R   RQLQ H+D ISCL
Sbjct: 122 CGRMLFSSHGDYRVRIWEVKMGNKRLKPKKISTLPPKRSLFVGRNGRRQLQQHSDHISCL 181

Query: 187 AYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSV 246
           AYN+ADKLLYTGSWDSTVK WNISENRCVDSFVAH GHVNAIVINQ+DGCVFTCSSD SV
Sbjct: 182 AYNDADKLLYTGSWDSTVKAWNISENRCVDSFVAHEGHVNAIVINQEDGCVFTCSSDTSV 241

Query: 247 KIWRRVFGESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFW 306
           KIWRRV+GESSHILTMILKFQLSPVNALALS+ LSSSS    KP NFLYSG SDG INFW
Sbjct: 242 KIWRRVYGESSHILTMILKFQLSPVNALALSL-LSSSS----KPCNFLYSGYSDGHINFW 301

Query: 307 EKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVS 366
           EKE+SSSRY HGGLLQGH F V CLVT+K+LI+SGSEDTAIR+WRREE G NG++H C+S
Sbjct: 302 EKESSSSRYNHGGLLQGHHFAVLCLVTVKDLILSGSEDTAIRIWRREERG-NGYLHWCLS 361

Query: 367 VIEGHHGPVRCLAAAMEIDNNMGNMLVCSASLDQTFKVWRVKL---------KKEIVGIS 426
           VIEGHHGPVRCLAA ME+D NMGNMLVCSASLDQ+FKVWRVKL         +  +  + 
Sbjct: 362 VIEGHHGPVRCLAAGMEMD-NMGNMLVCSASLDQSFKVWRVKLFPPPLMNRSEMNVEQLK 421

Query: 427 QIINNNNNNNPVLSPSWVEKRKLQGNDYYYS 449
           + I     NNPVLSPSWVEKRKLQ +DYY S
Sbjct: 422 KEIGGCEMNNPVLSPSWVEKRKLQFDDYYVS 444

[Close]

BLAST of Clc07G12830 vs. TAIR 10
Match: AT3G50390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 3.7e-58
Identity = 154/439 (35.08%), Postives = 229/439 (52.16%), Query Frame = 0


Query: 12  TSMEEQTKSIDLPQNAAVLPDP-----IHFPNSPSRPSAASV-PTPWTMSPAP------- 71
           TS +  +++         +PDP      +   SPS  S++ +  +PW++   P       
Sbjct: 9   TSRDVNSQAFTKLTKVETIPDPDIYDITYVDISPSEGSSSPLSKSPWSVQVDPSAVDSPY 68

Query: 72  ------------PPTNQQPFVYHCIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWKLP 131
                         TN  P +   + SL R +G+I S+A + + ++ GS+S  I+ WK  
Sbjct: 69  HSVKVTTDTTKEKSTNHSPNI--LLGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWK-- 128

Query: 132 DCPGVGFIKASSGQVGAMFACGRMLFSCHGDHRVRIWDVKMGNKRLKPKKISTLP----- 191
           +       K++SG V A+   G  +F+ H D ++R+W        +  +++ T+P     
Sbjct: 129 NHVEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVH-RRVGTMPNLLDY 188

Query: 192 ------PKRSFLVVR--KSSRQLQY-HTDFISCLAYNEADKLLYTGSWDSTVKVWNISEN 251
                 P   F   R  +SS  L + H D ISCLA +E  +LLY+GSWD T KVW +S+ 
Sbjct: 189 IRNSIVPSSYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDL 248

Query: 252 RCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKIWRR--VFGESSHILTMILKFQLSP 311
           RCV+S  AH   VNA V++  DG VFT S+DG+VK+WRR     ++ H  +  L  Q   
Sbjct: 249 RCVESVNAHEDAVNA-VVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCA 308

Query: 312 VNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGC 371
           V A+A+  S +            +Y GSSDG +NFWE+EN+    K+GG+L+GH+  V C
Sbjct: 309 VTAIAVDQSAT-----------LVYCGSSDGTVNFWERENN---MKNGGVLKGHKLAVLC 368

Query: 372 LVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMG- 408
           LV    L+ SGS D  IRVWRR E G     H C+SV+ GH GPV+CLA   + ++  G 
Sbjct: 369 LVAAGNLMFSGSADLGIRVWRRPEGGGE---HVCLSVLTGHAGPVKCLAVERDQESVSGE 424

[Close]

BLAST of Clc07G12830 vs. TAIR 10
Match: AT2G26490.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 3.8e-55
Identity = 140/392 (35.71%), Postives = 210/392 (53.57%), Query Frame = 0


Query: 32  DPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPFVYHCIASLHRPDGNILSIAMTKEFI 91
           D +    SP   S  +  TP+T +         P     I SL R +G+I S+A TK+ +
Sbjct: 51  DRMSCEGSPMMMSPWNQATPFTQTQWSTVEENLP-QNGLIGSLVREEGHIYSLAATKDLL 110

Query: 92  FVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFACGRMLFSCHGDHRVRIWDVKMGNKR 151
           + GS+S  I+ WK  +       K +SG V A+   G  +F+ H D ++R+W V   N+ 
Sbjct: 111 YTGSDSKNIRVWK--NLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQS 170

Query: 152 LKPKKISTLP----------PKRSFLVVRKSSRQLQY-HTDFISCLAYNEADKLLYTGSW 211
           L  K+  TLP            R+++ V+K    L   H D +SCL+ N+   LLY+ SW
Sbjct: 171 LH-KRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASW 230

Query: 212 DSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKIWRR--VFGESSH 271
           D T+KVW I++++C++S  AH   VN+ V++  +  VF+ S+DG+VK W+R      + H
Sbjct: 231 DRTIKVWRIADSKCLESIPAHDDAVNS-VVSTTEAIVFSGSADGTVKAWKRDQQGKYTKH 290

Query: 272 ILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFWEKENSSSRYKHG 331
            L   L  Q S V ALA+S + ++           +Y GSSDGL+NFWE+E    +  +G
Sbjct: 291 TLMQTLTKQESAVTALAVSKNGAA-----------VYFGSSDGLVNFWERE---KQLNYG 350

Query: 332 GLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVSVIEGHHGPVRCL 391
           G+L+GH+  V CL     L+ SGS D  I VW+R+     G +H C+SV+ GH GPV+CL
Sbjct: 351 GILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRD-----GNIHTCLSVLTGHTGPVKCL 410

Query: 392 AAAME---IDNNMGNMLVCSASLDQTFKVWRV 408
           A   +    +      +V S SLD++ KVW V
Sbjct: 411 AVEADREASERRDKKWIVYSGSLDKSVKVWGV 418

[Close]

BLAST of Clc07G12830 vs. TAIR 10
Match: AT1G49450.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 9.3e-54
Identity = 141/412 (34.22%), Postives = 222/412 (53.88%), Query Frame = 0


Query: 35  HFPNSPSRPSAASV-PTPWTMSPAPPPTNQQPFVYH-------------CIASLHRPDGN 94
           ++P++ +  S +SV  +PW  + +  P ++ P++Y               I ++ R +G+
Sbjct: 79  YYPSNDNTTSFSSVTQSPWNQTYS--PYHKSPWIYQTRNSDFEDDPDNGLIGTVVRQEGH 138

Query: 95  ILSIAMTKEFIFVGSESGQIQSWKLPDCPGVGFIKASSGQVGAMFAC-GRMLFSCHGDHR 154
           + S+A + + +F GS+S  I+ WK  D       K++SG V A+       +F+ H D +
Sbjct: 139 VYSLAASGDLLFTGSDSKNIRVWK--DLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQDGK 198

Query: 155 VRIWDVKMGNKRLKPKKISTLPPKRSFLV----------VRKSSRQLQY-HTDFISCLAY 214
           +R+W     N   K  ++ +LP  + FL           VR+    L+  H D +SCL+ 
Sbjct: 199 IRVWRGSKKNPE-KYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSL 258

Query: 215 NEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVFTCSSDGSVKI 274
           NE   LLY+GSWD T+KVW +S+++C++S  AH   VN  V++  D  VFT S+DG++K+
Sbjct: 259 NEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNT-VVSGFDDLVFTGSADGTLKV 318

Query: 275 WRR-VFG-ESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYSGSSDGLINFW 334
           W+R V G E  H+L  +L  Q + V ALA++++ +            +Y GSSDG +NFW
Sbjct: 319 WKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDA-----------VVYCGSSDGTVNFW 378

Query: 335 EKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIGNNGFVHCCVS 394
           E++   +   H G + GH+  V CL T   L++SG  D  I VW+R   G+    H C+S
Sbjct: 379 ERQKYLT---HKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGS----HTCLS 438

Query: 395 VIEGHHGPVRCLAAAMEI--DNNMGN---------MLVCSASLDQTFKVWRV 408
           V+  H GPV+CLAA  E   D+N G+          +V S SLD + KVWRV
Sbjct: 439 VLMDHEGPVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSGSLDNSVKVWRV 466

[Close]

BLAST of Clc07G12830 vs. TAIR 10
Match: AT3G18950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-53
Identity = 146/431 (33.87%), Postives = 225/431 (52.20%), Query Frame = 0


Query: 12  TSMEEQTKSIDLPQNAAVLPDPIHFPNSPSRPSAASVPTPWTMSPAPPPTNQQPFVYH-- 71
           TS E     +  P N    P   ++ ++ + PS +  P+PW  + +  P  + P++Y   
Sbjct: 68  TSGESSPNQVLSPWNQTYSP---YYTDTTNTPSMS--PSPWNQTYS--PYYKSPWIYQTR 127

Query: 72  ---------CIASLHRPDGNILSIAMTKEFIFVGSESGQIQSWK-LPDCPGVGFIKASSG 131
                     I ++ R DG++ S+A + + +F GS+S  I+ WK L D  G    K++SG
Sbjct: 128 NIDDDTDNGLIGTIVRQDGHVYSLAASGDLLFTGSDSKNIRVWKDLKDHTG---FKSTSG 187

Query: 132 QVGAMFACG-RMLFSCHGDHRVRIWDVKMGNKRLKP--KKISTLPPKRSFLV-------- 191
            V A+   G   +F+ H D ++R+W    G+KR      +I +LP  + FL         
Sbjct: 188 LVKAIVITGDNRIFTGHQDGKIRVW---RGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNY 247

Query: 192 --VRKSSRQLQY-HTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHV 251
             VR+    L+  H D +SCL+ NE   LLY+GSWD T+KVW +S+++C++S  AH   +
Sbjct: 248 VEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAI 307

Query: 252 NAIVINQKDGCVFTCSSDGSVKIWRRVF--GESSHILTMILKFQLSPVNALALSVSLSSS 311
           N +     D  +FT S+DG++K+W+R      + H L  +L  Q + V ALA++++ +  
Sbjct: 308 NTVAAG-FDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAA-- 367

Query: 312 SSSSLKPYNFLYSGSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSE 371
                     +Y GSSDG +NFWE +   S   HGG L+GH+  V CL     L++SG  
Sbjct: 368 ---------VVYCGSSDGTVNFWEGQKYLS---HGGTLRGHRLAVLCLAAAGSLVLSGGA 427

Query: 372 DTAIRVWRREEIGNNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMGN-------MLVCSA 408
           D  I VWRR   G+    H C+SV+  H GPV+CL A    D+  G+        +V S 
Sbjct: 428 DKNICVWRRNGDGS----HSCLSVLMDHVGPVKCLTAVE--DDGEGHREKGDQKWIVYSG 464

[Close]

BLAST of Clc07G12830 vs. TAIR 10
Match: AT4G34380.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 206.5 bits (524), Expect = 4.6e-53
Identity = 134/361 (37.12%), Postives = 204/361 (56.51%), Query Frame = 0


Query: 71  IASLHRPDGNILSIAMTKEFIFVGSESGQIQSWK-LPDCPGVGFIKASSGQVGAMFACGR 130
           I S+ R +G+I S+A + + ++ GS+S  I+ WK L +  G    K+SSG + A+   G 
Sbjct: 118 IGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEHAG---FKSSSGLIKAIVIFGD 177

Query: 131 MLFSCHGDHRVRIWDVKMGNKRLKPKKISTLPPKRS----------FLVVRKSSRQLQ-Y 190
            +F+ H D ++RIW V    K  K K++ TLP  +S          F+ VR++   ++  
Sbjct: 178 RIFTGHQDGKIRIWKVSK-RKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTK 237

Query: 191 HTDFISCLAYNEADKLLYTGSWDSTVKVWNISENRCVDSFVAHAGHVNAIVINQKDGCVF 250
           H D +S L+ +    LLY+ SWD+T+KVW I++++C++S  AH   +N+ V++  D  VF
Sbjct: 238 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINS-VMSGFDDLVF 297

Query: 251 TCSSDGSVKIWRRVF--GESSHILTMILKFQLSPVNALALSVSLSSSSSSSLKPYNFLYS 310
           T S+DG+VK+W+R      + H L  +L  Q + V ALA+       S SS+     +Y 
Sbjct: 298 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAV------KSQSSI-----VYC 357

Query: 311 GSSDGLINFWEKENSSSRYKHGGLLQGHQFGVGCLVTIKELIVSGSEDTAIRVWRREEIG 370
           GSSDGL+N+WE+   S R   GG+L+GH+  V CL     L++SGS D  I VWRR+   
Sbjct: 358 GSSDGLVNYWER---SKRSFTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSD 417

Query: 371 NNGFVHCCVSVIEGHHGPVRCLAAAMEIDNNMG----------NMLVCSASLDQTFKVWR 408
            +   H C+SV+ GH GPV+CLA   E   + G            ++ S SLD++ KVWR
Sbjct: 418 KS---HQCLSVLTGHMGPVKCLAVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWR 456

The following BLAST results are available for this feature:

BLAST of Clc07G12830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882793.1	2.9e-230	89.01	protein JINGUBANG-like [Benincasa hispida]	[more]
XP_008447531.1	2.4e-221	85.87	PREDICTED: lissencephaly-1 homolog [Cucumis melo]	[more]
XP_004151383.1	2.1e-217	83.99	protein JINGUBANG isoform X1 [Cucumis sativus] >KGN58050.1 hypothetical protein ...	[more]
KAA0050810.1	1.7e-214	85.55	lissencephaly-1-like protein [Cucumis melo var. makuwa] >TYK08535.1 lissencephal...	[more]
XP_023526893.1	2.3e-203	79.48	protein JINGUBANG-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc07G12830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48716	5.3e-54	35.71	Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1	[more]
A0A2R8QFQ6	1.8e-17	29.26	F-box and WD repeat domain-containing 11-A OS=Danio rerio OX=7955 GN=fbxw11a PE=...	[more]
Q91854	1.8e-17	28.88	Beta-TrCP OS=Xenopus laevis OX=8355 GN=fbxw1 PE=1 SV=1	[more]
Q3ULA2	3.0e-17	27.31	F-box/WD repeat-containing protein 1A OS=Mus musculus OX=10090 GN=Btrc PE=1 SV=2	[more]
Q9UKB1	4.0e-17	28.63	F-box/WD repeat-containing protein 11 OS=Homo sapiens OX=9606 GN=FBXW11 PE=1 SV=...	[more]

BLAST of Clc07G12830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIJ7	1.2e-221	85.87	lissencephaly-1 homolog OS=Cucumis melo OX=3656 GN=LOC103489957 PE=4 SV=1	[more]
A0A0A0L804	1.0e-217	83.99	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A5A7U6L3	8.1e-215	85.55	Lissencephaly-1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1GYJ3	1.8e-201	79.16	protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111458017 PE=4 SV=1	[more]
A0A6J1IWL1	1.9e-200	79.60	protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111479229 PE=4 SV=1	[more]

BLAST of Clc07G12830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50390.1	3.7e-58	35.08	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G26490.1	3.8e-55	35.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G49450.1	9.3e-54	34.22	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G18950.1	2.1e-53	33.87	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G34380.1	4.6e-53	37.12	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 195..209 score: 41.05 coord: 131..145 score: 33.3 coord: 338..352 score: 33.56
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 169..208 e-value: 6.1E-7 score: 39.1 coord: 314..351 e-value: 1.3 score: 16.3 coord: 107..144 e-value: 13.0 score: 9.9 coord: 361..406 e-value: 0.021 score: 24.0 coord: 257..307 e-value: 0.35 score: 19.9 coord: 211..250 e-value: 5.3E-6 score: 35.9 coord: 67..104 e-value: 5.6 score: 12.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 364..405 e-value: 0.0041 score: 17.9 coord: 175..208 e-value: 1.2E-4 score: 22.8 coord: 321..350 e-value: 0.081 score: 13.8 coord: 213..249 e-value: 4.9E-4 score: 20.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 176..217 score: 14.752563
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 218..249 score: 10.374778
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 321..350 score: 9.338814
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 53..252 e-value: 4.1E-32 score: 113.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 255..442 e-value: 9.4E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..58
None	No IPR available	PANTHER	PTHR22844:SF338	F-BOX/WD REPEAT-CONTAINING PROTEIN SEL-10-LIKE	coord: 1..439
None	No IPR available	PANTHER	PTHR22844	F-BOX AND WD40 DOMAIN PROTEIN	coord: 1..439
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 218..249 score: 8.729241
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 176..213 score: 11.233774
None	No IPR available	CDD	cd00200	WD40	coord: 75..406 e-value: 6.37765E-40 score: 142.859
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 195..209
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 68..430

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G12830.2	Clc07G12830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity