Clc07G10330 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G10330
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Phytoene synthase, chloroplastic
Location	ClcChr07: 24914344 .. 24917638 (+)
RNA-Seq Expression	Clc07G10330
Synteny	Clc07G10330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

atgtctggtgtgaatgccaactctctgctgagccccaagccaagaatcagaatcagcagcaagccatttgggtctagaagattgagtttcttttctgatggggttttggcttcctctgctgctgtggtgaatccttcaagatcgtctgaagaaagggtctatgaagttgtgctgaagcaagcggctcttgtgagagaacccaaaagggatattcagagagctttggattgggaaaaaaccatccaaaatgagggcatcactgatgggaatctcttgtctgaggcttattctcgctgtggtgaggtctgtgctgaatatgccaaaacattttacttgggtaaactttttcctctttcctactcttttcattctgggttgaatgcttttgtttctgtcatcctgtttatagagttccattacaatttgtactgctgcctttctttgagatatagattgtttggttgccaagaatatagaattgggatgttttctactcttgtgatacctttcctaatggctgaagttgggttcaaaccatttggtttttttctccttttcccctttgttgttacaaattgtagtaaagttaaaaggggcatgcacattttctaactctgtagtccgcaaaagatgggaagaatattgctcaattttgatcttagcatctcaacttcaaataattgtttgattgagtctctttcttgctattctcagggacacaacttatgacaccagagcgaagaagagccgtgtgggcgatttatggtatcagtcatcctcttcctccatcatgttgtctttttgtctgctgcaatttttgttcatttttgtagaccaagttgcttgttggacatggcaatggacggacacaagttgtatctatgcttacttatgatacatgtagaatcacaagttgtcttttaactttttggttaaattataagtttgggccttctaatccaagatttgtatctaggtcctcgaacaagtgttcaataacacccaaattcagtagtggtatgtcctaaaggttcttgaattttgaaaagtttataataaatccataaattttcaattttgtatcaatgaatctctaaacttttttggttttgtcctaaatccctaacttattagacaccaatttgaaagtttatagacttattacaaatatttaaagatgaataacttattagacacaagttgaaaattaggaacctattaggcaacttttcaaatagagaatcctatgagacatgatccaaaaggttagagacaaaacttgtaatttatcttaactattatatcatttctttaagatttgtagttaagttgggtattaatctaaatgacagttaattgaacacaattcttaatcactactctttttatttcacatttggagtatcaatgacccatggcctcctttatagagagatttccgaagataacaaaaatttgtaagttattaagttatcaactggaaaatttgaacccaaggttatcaacgatatctcaaaacatcttaagctcttacataacacatcctcagggatcattcttaatcactacatttgcagtcctgttacttttatatgttttcaataaaaatataccgtcccggcacttgctatgctatactttttgttcatactactgccatattagcagtttgccacacagttcataacattccttttgaagttatcttcggtttgaacgttcaagaaactctttgtaatgcagtgtggtgcagaaggactgatgagctcgtggatggacctaatgcttcacacatcacccctaaagctcttgagcgatgggaaaaacgactaactgatctatttgagggtcgaccatatgatatgtatgatgctgctctttccgatacagtctcaaaataccctgttgacattcaggtaaacttgacttagggtctgtttaaaatgattttcacaatatttatgtttctcttcactctctttgcgatatgaaaactttaggctgccatgactaagatcttgtgaaacctaacaaaaagtcagatcccaatgaagaaacgaacttttttgacagtacaagaacaacagagaggaactcacaaattggagatgttattgcctgccttctatcattaaaacttgatcctccaagtcaatgagatttagccctttcttgctctaatttgaattggcagtgcatgaatttgtttggtctaaacaaaagcacttgaattaaaacgagcaacaataatttagctactcttgtcttcgagtaaaggaggtctaaatccatttttcatcactagctccatttgtataggttttgattcacttggcttgaaattatacatattatgtttttgacagcccttcaaggacatgatcgaaggaatgaggttggacctgcgaaaatcaagatatgagaactttgacgagctttacctttattgctattatgttgcggggactgtgggctcatgagtgttcctgtcatgggattggcacctgagtcgaaagcttcagtagagagcgtctacaatgcagcattggctctcggactcgccaatcaactcaccaacattctcagagacgttggagaagagtaagctttcctctaccatctttttataacaactatattgctttcaaaaccaaaaaggttacaaattagtttcataacgaaccttaacatttagttgttaaaatcagaacaaacacaaaacctttttgaagtttccaatagtaacctacgtttagttgttcattggtatcttggaggaattggttcatatttttttttggacagtgctaggaggggaagagtatatctcccacaagacgagttggcacaagcagggctatgcgacgacgacatattccgagggaaagtgactgacaagtggcggtttttcatgaaaggacagataaaaagagcaagaaggttctttgatgaggctgagaagggagttgcagaacttagtgcagccagtagatggccagtgtgggcatccctaatgctttataagcaaatattggattccattgaagcaaatgactatgacaatttcaccaaaagggcatatgtaggcaaagcaaagaaactgttatcccttcccatagcctttgggagagctatggtgggcccctcaagcttcaaagatttggtaacaagatagtttctttttccttttttttttttcttcttttcttttcccccctttttgtgattgttcaatatgtctagacaatttgctgattgtaaattttaggtgttagatgtctttgaagcaaattga

mRNA sequence

atgtctggtgtgaatgccaactctctgctgagccccaagccaagaatcagaatcagcagcaagccatttgggtctagaagattgagtttcttttctgatggggttttggcttcctctgctgctgtggtgaatccttcaagatcgtctgaagaaagggtctatgaagttgtgctgaagcaagcggctcttgtgagagaacccaaaagggatattcagagagctttggattgggaaaaaaccatccaaaatgagggcatcactgatgggaatctcttgtctgaggcttattctcgctgtggtgaggtctgtgctgaatatgccaaaacattttacttggggacacaacttatgacaccagagcgaagaagagccgtgtgggcgatttatgtgtggtgcagaaggactgatgagctcgtggatggacctaatgcttcacacatcacccctaaagctcttgagcgatgggaaaaacgactaactgatctatttgagggtcgaccatatgatatgtatgatgctgctctttccgatacagtctcaaaataccctgttgacattcagcccttcaaggacatgatcgaaggaatgagtgttcctgtcatgggattggcacctgagtcgaaagcttcagtagagagcgtctacaatgcagcattggctctcggactcgccaatcaactcaccaacattctcagagacgttggagaagatgctaggaggggaagagtatatctcccacaagacgagttggcacaagcagggctatgcgacgacgacatattccgagggaaagtgactgacaagtggcggtttttcatgaaaggacagataaaaagagcaagaaggttctttgatgaggctgagaagggagttgcagaacttagtgcagccagtagatggccagtgtgggcatccctaatgctttataagcaaatattggattccattgaagcaaatgactatgacaatttcaccaaaagggcatatgtaggcaaagcaaagaaactgttatcccttcccatagcctttgggagagctatggtgggcccctcaagcttcaaagatttggtgttagatgtctttgaagcaaattga

Coding sequence (CDS)

atgtctggtgtgaatgccaactctctgctgagccccaagccaagaatcagaatcagcagcaagccatttgggtctagaagattgagtttcttttctgatggggttttggcttcctctgctgctgtggtgaatccttcaagatcgtctgaagaaagggtctatgaagttgtgctgaagcaagcggctcttgtgagagaacccaaaagggatattcagagagctttggattgggaaaaaaccatccaaaatgagggcatcactgatgggaatctcttgtctgaggcttattctcgctgtggtgaggtctgtgctgaatatgccaaaacattttacttggggacacaacttatgacaccagagcgaagaagagccgtgtgggcgatttatgtgtggtgcagaaggactgatgagctcgtggatggacctaatgcttcacacatcacccctaaagctcttgagcgatgggaaaaacgactaactgatctatttgagggtcgaccatatgatatgtatgatgctgctctttccgatacagtctcaaaataccctgttgacattcagcccttcaaggacatgatcgaaggaatgagtgttcctgtcatgggattggcacctgagtcgaaagcttcagtagagagcgtctacaatgcagcattggctctcggactcgccaatcaactcaccaacattctcagagacgttggagaagatgctaggaggggaagagtatatctcccacaagacgagttggcacaagcagggctatgcgacgacgacatattccgagggaaagtgactgacaagtggcggtttttcatgaaaggacagataaaaagagcaagaaggttctttgatgaggctgagaagggagttgcagaacttagtgcagccagtagatggccagtgtgggcatccctaatgctttataagcaaatattggattccattgaagcaaatgactatgacaatttcaccaaaagggcatatgtaggcaaagcaaagaaactgttatcccttcccatagcctttgggagagctatggtgggcccctcaagcttcaaagatttggtgttagatgtctttgaagcaaattga

Protein sequence

MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEGMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVLDVFEAN

Homology

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BLAST of Clc07G10330 vs. NCBI nr
Match: XP_004147748.1 (phytoene synthase 2, chloroplastic [Cucumis sativus] >KGN53515.1 hypothetical protein Csa_015349 [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 349/386 (90.41%), Postives = 353/386 (91.45%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS PFGS+RLSFFSDGVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGITDGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 358
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

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BLAST of Clc07G10330 vs. NCBI nr
Match: XP_008451831.1 (PREDICTED: phytoene synthase 2, chloroplastic [Cucumis melo] >AGJ74527.1 phytoene synthase 3 [Cucumis melo] >KAA0062944.1 phytoene synthase 2 [Cucumis melo var. makuwa] >TYK16398.1 phytoene synthase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 683.7 bits (1763), Expect = 8.6e-193
Identity = 345/386 (89.38%), Postives = 350/386 (90.67%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS PFGS+RLSFFSDG LASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGI DGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 358
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

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BLAST of Clc07G10330 vs. NCBI nr
Match: XP_038874358.1 (LOW QUALITY PROTEIN: phytoene synthase 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 681.0 bits (1756), Expect = 5.6e-192
Identity = 344/383 (89.82%), Postives = 351/383 (91.64%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLLSPKPRIRI+S+PFGS+RLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLSPKPRIRINSRPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRDIQRALDWEKTIQN+GITDGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDIQRALDWEKTIQNDGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCD+DIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDEDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 355
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

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BLAST of Clc07G10330 vs. NCBI nr
Match: KAG6600459.1 (Phytoene synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 626.3 bits (1614), Expect = 1.6e-175
Identity = 323/384 (84.11%), Postives = 334/384 (86.98%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLLSP P  RISS+  G +RLS FS GVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLSPMP--RISSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAYSRCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180
           ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEG                             MSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300

Query: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 355
            FMKGQIKRAR+FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 SFMKGQIKRARKFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

[Close]

BLAST of Clc07G10330 vs. NCBI nr
Match: XP_022981338.1 (phytoene synthase 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 625.2 bits (1611), Expect = 3.6e-175
Identity = 323/384 (84.11%), Postives = 333/384 (86.72%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLLSP PRI  SS+  G +RLS FS GVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAYSRCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180
           ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEG                             MSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300

Query: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 355
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

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BLAST of Clc07G10330 vs. ExPASy Swiss-Prot
Match: Q9SSU8 (Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.3e-140
Identity = 261/375 (69.60%), Postives = 292/375 (77.87%), Query Frame = 0


Query: 19  SSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQ-RALDW 78
           S K   S R+   S GV   SA   NP R+SEERVYEVVLKQAALVRE KR  +   LD 
Sbjct: 27  SRKSRFSCRVMKLSTGV---SAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDT 86

Query: 79  EKT---------IQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAI 138
           ++T           + G+   NLL+EAY RCGEVCAEYAKTFYLGT LMTPERRRAVWAI
Sbjct: 87  KRTGSKSFDKSENDDAGMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAI 146

Query: 139 YVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQP 198
           YVWCRRTDELVDGPNASHITPKAL+RWEKRL DLF+G+PYDMYDAAL+DTVS YPVDIQP
Sbjct: 147 YVWCRRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQP 206

Query: 199 FKDMIEG-----------------------------MSVPVMGLAPESKASVESVYNAAL 258
           FKDMI+G                             MSVPVMG+APESKA+ ESVY+AAL
Sbjct: 207 FKDMIDGMRMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAAL 266

Query: 259 ALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKR 318
           ALG+ANQLTNILRDVGEDARRGR+YLPQ+EL  AG+  + IF+GKVTDKWR FMKGQIKR
Sbjct: 267 ALGIANQLTNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKR 326

Query: 319 ARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSL 355
           AR FFDEAEKGVAELS+ASRWPVWASL+LYKQILD+IEANDYDNFTKRAYVGKAKKL+SL
Sbjct: 327 ARMFFDEAEKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSL 386

[Close]

BLAST of Clc07G10330 vs. ExPASy Swiss-Prot
Match: Q6EI12 (Phytoene synthase 2, chloroplastic OS=Zea mays OX=4577 GN=PSY2 PE=1 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.2e-134
Identity = 250/371 (67.39%), Postives = 282/371 (76.01%), Query Frame = 0


Query: 13  KPRIRISSKPFGSRRLSFFSD--GVLASSAAVVNPSRSSEERVYEVVLKQAALVR--EPK 72
           +PR  + + P    R S  S     LA++A  V    +SEE VYEVVL+QAALV    P+
Sbjct: 32  RPRRALQTPPALPARRSGASPPRASLAAAAPAVAVRTASEEAVYEVVLRQAALVEAATPQ 91

Query: 73  RDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAI 132
           R   R   W +  + E +    LL +AY RCGEVCAEYAKTFYLGTQLMTPERR+AVWAI
Sbjct: 92  RRRTRQPRWAEEEEEERVLGWGLLGDAYDRCGEVCAEYAKTFYLGTQLMTPERRKAVWAI 151

Query: 133 YVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQP 192
           YVWCRRTDELVDGPNAS+ITP AL+RWEKRL DLFEGRPYDMYDAALSDTVSK+PVDIQP
Sbjct: 152 YVWCRRTDELVDGPNASYITPTALDRWEKRLEDLFEGRPYDMYDAALSDTVSKFPVDIQP 211

Query: 193 FKDMIEG-----------------------------MSVPVMGLAPESKASVESVYNAAL 252
           FKDM++G                             M+VPVMG+AP+SKAS ESVYNAAL
Sbjct: 212 FKDMVQGMRLDLWKSRYMTFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAAL 271

Query: 253 ALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKR 312
           ALG+ANQLTNILRDVGEDARRGR+YLP DELAQAGL ++DIFRGKVT KWR FMKGQI+R
Sbjct: 272 ALGIANQLTNILRDVGEDARRGRIYLPLDELAQAGLTEEDIFRGKVTGKWRRFMKGQIQR 331

Query: 313 ARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSL 351
           AR FFDEAEKGV  L +ASRWPV ASL LY+QILD+IEANDY+NFTKRAYVGKAKKLLSL
Sbjct: 332 ARLFFDEAEKGVTHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKKLLSL 391

[Close]

BLAST of Clc07G10330 vs. ExPASy Swiss-Prot
Match: Q2QLV9 (Phytoene synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSY2 PE=1 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 2.3e-132
Identity = 243/352 (69.03%), Postives = 274/352 (77.84%), Query Frame = 0


Query: 26  RRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNEG 85
           R L   S  V  +  AV +   ++EE VYEVVL+QAALV E     +R     +  + + 
Sbjct: 47  RPLQAASLAVATAPVAVASRRTAAEEAVYEVVLRQAALVEEATH--RRGAGAPRWAEEDA 106

Query: 86  ITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNAS 145
           +  G LL +AY RCGEVCAEYAKTFYLGTQLMTPERR+AVWAIYVWCRRTDELVDGPN+S
Sbjct: 107 VDWGLLLGDAYHRCGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSS 166

Query: 146 HITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEG---------- 205
           +ITPKAL+RWEKRL DLFEGRPYDMYDAALSDTVSK+PVDIQPFKDMIEG          
Sbjct: 167 YITPKALDRWEKRLEDLFEGRPYDMYDAALSDTVSKFPVDIQPFKDMIEGMRLDLWKSRY 226

Query: 206 -------------------MSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGE 265
                              M+VPVMG+AP+SKAS ESVYNAALALG+ANQLTNILRDVGE
Sbjct: 227 RSFDELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGE 286

Query: 266 DARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSA 325
           D+RRGR+YLP DELA+AGL ++DIFRGKVTDKWR FMKGQI RAR FFDEAEKGVA L +
Sbjct: 287 DSRRGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDS 346

Query: 326 ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMV 349
           ASRWPV ASL LY+QILD+IEANDY+NFTKRAYV KAKKLLSLP+A+ RA V
Sbjct: 347 ASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYARAAV 396

[Close]

BLAST of Clc07G10330 vs. ExPASy Swiss-Prot
Match: P37271 (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-130
Identity = 240/359 (66.85%), Postives = 278/359 (77.44%), Query Frame = 0


Query: 25  SRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           SRR+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKK--PQD 122

Query: 85  GITDG--NLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGP 144
            +  G  +LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGP
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGP 182

Query: 145 NASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEG------- 204
           NASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++YPVDIQPF+DMIEG       
Sbjct: 183 NASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKK 242

Query: 205 ----------------------MSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 264
                                 MSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNILRD
Sbjct: 243 SRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRD 302

Query: 265 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 324
           VGEDARRGRVYLPQDELAQAGL D+DIF GKVTDKWR FMK Q+KRAR FFDEAEKGV E
Sbjct: 303 VGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTE 362

Query: 325 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSS 353
           LSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ ++++  SS
Sbjct: 363 LSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSS 417

[Close]

BLAST of Clc07G10330 vs. ExPASy Swiss-Prot
Match: P49293 (Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-129
Identity = 240/354 (67.80%), Postives = 278/354 (78.53%), Query Frame = 0


Query: 34  GVLASSAAVVNPSR----SSEERVYEVVLKQAALVREPKRDIQRA--LDWEKTIQNEGIT 93
           G +  ++ V NP+     S+E++VY VV+KQAALV   KR ++ A  LD +  I   G  
Sbjct: 74  GSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALV---KRQLRTAGELDVKPDIVLPGTL 133

Query: 94  DGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHI 153
             +LL+EAY RCGEVCAEYAKTFYLGT LMTPER++A+WAIYVWCRRTDELVDGPNASHI
Sbjct: 134 --SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHI 193

Query: 154 TPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEG------------ 213
           TP AL+RWE RL +LF+GRP+DM DAAL+DTV+K+PVDIQPFKDMIEG            
Sbjct: 194 TPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQPFKDMIEGMRMDLRKSRYKN 253

Query: 214 -----------------MSVPVMGLAPESKASVESVYNAALALGLANQL-TNILRDVGED 273
                            MSVPVMG+APES+AS ESVYNAALALG+ANQ   NILRDVGED
Sbjct: 254 FDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNILRDVGED 313

Query: 274 ARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAA 333
           ARRGR+YLPQDELAQAGL D+DIF G+VTDKWR FMK QIKRAR FFDEAEKGV EL+ A
Sbjct: 314 ARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGVLELNKA 373

Query: 334 SRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPS 352
           SRWPVWASL+LY+QILD IEANDYDNFTKRAYV KAKK+L+LP+A+GRA++GPS
Sbjct: 374 SRWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

[Close]

BLAST of Clc07G10330 vs. ExPASy TrEMBL
Match: A0A0A0KVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 5.8e-195
Identity = 349/386 (90.41%), Postives = 353/386 (91.45%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS PFGS+RLSFFSDGVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGITDGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 358
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

[Close]

BLAST of Clc07G10330 vs. ExPASy TrEMBL
Match: T1RK41 (Phytoene synthase 3 OS=Cucumis melo OX=3656 GN=PSY3 PE=3 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 4.2e-193
Identity = 345/386 (89.38%), Postives = 350/386 (90.67%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS PFGS+RLSFFSDG LASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGI DGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 358
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

[Close]

BLAST of Clc07G10330 vs. ExPASy TrEMBL
Match: A0A5A7V6T6 (Phytoene synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001920 PE=3 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 4.2e-193
Identity = 345/386 (89.38%), Postives = 350/386 (90.67%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS PFGS+RLSFFSDG LASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGI DGNLLSEAY+RCGEVCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180
           RR+AVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS
Sbjct: 121 RRKAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVS 180

Query: 181 KYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKASV 240
           KYPVDIQPFKDMIEG                             MSVPVMGLAPESKASV
Sbjct: 181 KYPVDIQPFKDMIEGMRLDLRKSRYESFDELYLYCYYVAGTVGLMSVPVMGLAPESKASV 240

Query: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300
           ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF
Sbjct: 241 ESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRF 300

Query: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 358
           FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG
Sbjct: 301 FMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVG 360

[Close]

BLAST of Clc07G10330 vs. ExPASy TrEMBL
Match: A0A6J1J1U3 (phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480496 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.8e-175
Identity = 323/384 (84.11%), Postives = 333/384 (86.72%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLLSP PRI  SS+  G +RLS FS GVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLSPMPRIS-SSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMTP 120
           AALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAYSRCGEVCAEYAKTFYLGTQLMTP
Sbjct: 61  AALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGTQLMTP 120

Query: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTV 180
           ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGR YDMYDAALSDTV
Sbjct: 121 ERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRAYDMYDAALSDTV 180

Query: 181 SKYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKAS 240
           SKYPVDIQPFKDMIEG                             MSVPVMGLAPESKAS
Sbjct: 181 SKYPVDIQPFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 240

Query: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 300
           VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR
Sbjct: 241 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWR 300

Query: 301 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 355
            FMKGQIKRAR FFDEAEKG+ EL+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV
Sbjct: 301 SFMKGQIKRARMFFDEAEKGIGELNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 360

[Close]

BLAST of Clc07G10330 vs. ExPASy TrEMBL
Match: A0A6J1ETX4 (phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437685 PE=3 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.3e-175
Identity = 319/385 (82.86%), Postives = 331/385 (85.97%), Query Frame = 0


Query: 1   MSGVNANSLLSPKPRIRISSKPFGSRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNAN+LLSPKPRIRI  KP G +RLS F  GV  SSA V NPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEG--ITDGNLLSEAYSRCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTIQNEG    DGNLL+EAY+RCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYPVDIQPFKDMIEG-----------------------------MSVPVMGLAPESKA 240
           VSKY VDIQPFKDMIEG                             MSVPVMGLAPESKA
Sbjct: 181 VSKYFVDIQPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKA 240

Query: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKW 300
           SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF GKVT+KW
Sbjct: 241 SVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKW 300

Query: 301 RFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 355
           R FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY
Sbjct: 301 RSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAY 360

[Close]

BLAST of Clc07G10330 vs. TAIR 10
Match: AT5G17230.1 (PHYTOENE SYNTHASE )

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-131
Identity = 240/359 (66.85%), Postives = 278/359 (77.44%), Query Frame = 0


Query: 25  SRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           SRR+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKK--PQD 122

Query: 85  GITDG--NLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGP 144
            +  G  +LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGP
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGP 182

Query: 145 NASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEG------- 204
           NASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++YPVDIQPF+DMIEG       
Sbjct: 183 NASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKK 242

Query: 205 ----------------------MSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 264
                                 MSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNILRD
Sbjct: 243 SRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRD 302

Query: 265 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 324
           VGEDARRGRVYLPQDELAQAGL D+DIF GKVTDKWR FMK Q+KRAR FFDEAEKGV E
Sbjct: 303 VGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTE 362

Query: 325 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSS 353
           LSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ ++++  SS
Sbjct: 363 LSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSS 417

[Close]

BLAST of Clc07G10330 vs. TAIR 10
Match: AT5G17230.2 (PHYTOENE SYNTHASE )

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-131
Identity = 240/359 (66.85%), Postives = 278/359 (77.44%), Query Frame = 0


Query: 25  SRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           SRR+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKK--PQD 122

Query: 85  GITDG--NLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGP 144
            +  G  +LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGP
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGP 182

Query: 145 NASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQPFKDMIEG------- 204
           NASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++YPVDIQPF+DMIEG       
Sbjct: 183 NASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKK 242

Query: 205 ----------------------MSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 264
                                 MSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNILRD
Sbjct: 243 SRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRD 302

Query: 265 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 324
           VGEDARRGRVYLPQDELAQAGL D+DIF GKVTDKWR FMK Q+KRAR FFDEAEKGV E
Sbjct: 303 VGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTE 362

Query: 325 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSS 353
           LSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +LP+A+ ++++  SS
Sbjct: 363 LSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKTSS 417

[Close]

BLAST of Clc07G10330 vs. TAIR 10
Match: AT5G17230.3 (PHYTOENE SYNTHASE )

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-128
Identity = 240/374 (64.17%), Postives = 278/374 (74.33%), Query Frame = 0


Query: 25  SRRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           SRR+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKK--PQD 122

Query: 85  GITDG--NLLSEAYSRCGEVCAEYAKTFYLGTQLMTPERRRAVWAIY------------- 144
            +  G  +LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIY             
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIV 182

Query: 145 --VWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQ 204
             VWCRRTDELVDGPNASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++YPVDIQ
Sbjct: 183 ALVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQ 242

Query: 205 PFKDMIEG-----------------------------MSVPVMGLAPESKASVESVYNAA 264
           PF+DMIEG                             MSVPVMG+ P+SKA+ ESVYNAA
Sbjct: 243 PFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAA 302

Query: 265 LALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIK 324
           LALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVTDKWR FMK Q+K
Sbjct: 303 LALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLK 362

Query: 325 RARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLS 353
           RAR FFDEAEKGV ELSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYVGK KK+ +
Sbjct: 363 RARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAA 422

The following BLAST results are available for this feature:

BLAST of Clc07G10330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147748.1	1.2e-194	90.41	phytoene synthase 2, chloroplastic [Cucumis sativus] >KGN53515.1 hypothetical pr...	[more]
XP_008451831.1	8.6e-193	89.38	PREDICTED: phytoene synthase 2, chloroplastic [Cucumis melo] >AGJ74527.1 phytoen...	[more]
XP_038874358.1	5.6e-192	89.82	LOW QUALITY PROTEIN: phytoene synthase 2, chloroplastic-like [Benincasa hispida]	[more]
KAG6600459.1	1.6e-175	84.11	Phytoene synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022981338.1	3.6e-175	84.11	phytoene synthase 2, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Clc07G10330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSU8	2.3e-140	69.60	Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1	[more]
Q6EI12	3.2e-134	67.39	Phytoene synthase 2, chloroplastic OS=Zea mays OX=4577 GN=PSY2 PE=1 SV=1	[more]
Q2QLV9	2.3e-132	69.03	Phytoene synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
P37271	1.7e-130	66.85	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV...	[more]
P49293	1.4e-129	67.80	Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]

BLAST of Clc07G10330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVC2	5.8e-195	90.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=3 SV=1	[more]
T1RK41	4.2e-193	89.38	Phytoene synthase 3 OS=Cucumis melo OX=3656 GN=PSY3 PE=3 SV=1	[more]
A0A5A7V6T6	4.2e-193	89.38	Phytoene synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]
A0A6J1J1U3	1.8e-175	84.11	phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]
A0A6J1ETX4	2.3e-175	82.86	phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Clc07G10330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17230.1	1.2e-131	66.85	PHYTOENE SYNTHASE	[more]
AT5G17230.2	1.2e-131	66.85	PHYTOENE SYNTHASE	[more]
AT5G17230.3	1.2e-128	64.17	PHYTOENE SYNTHASE	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 199..340 e-value: 1.1E-40 score: 141.6 coord: 86..198 e-value: 1.9E-24 score: 88.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 95..347
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 197..332 e-value: 4.9E-32 score: 111.5
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	PANTHER	PTHR31480	BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE	coord: 36..196 coord: 196..354
None	No IPR available	PANTHER	PTHR31480:SF2	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 36..196 coord: 196..354
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 221..246
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 97..335 e-value: 2.76461E-84 score: 254.852

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G10330.1	Clc07G10330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016120	carotene biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0046905	15-cis-phytoene synthase activity
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups