Clc07G06445 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAACTGAAAATGAGAAACGAATGGCACATTGGTATGTATTTAACAACAGTTCTGAGATAACGTCTCATCGTAGGTACGTTTCGGATTCTACAAATTTAGTTAATATCTTTGGTTTTCAAATTCGATATTAGTTCTAATTTCAAAATTTCGTTTCATTGTGCAAAAATATTTATAAATAGGGAACATTTGAGATTGATTCATACTCGAGCAGACACAACATCAGAATTATCTCAAAGACATCGATCACAATTCCCTAATTGGTTTAAAGACCATGTAAGTCTACTTCTCCAAGTTGAAATTTGAACATCAATAATGAGTTAAAAATTTGATTTGTAATCATCCATTAATAATAGGTTTACTCACTACATCAAAGAGGAGAAGCATCTGATGATCTTTACTCGATATCACTTGGTCCTTCTAGTCAAGTCCGATCTTACAATGCTTGCATTGTCAATGGAGTGTCTGGTTTCATTGTATTGATCGCGATGAAAACCGATCTACTCAGAATAGTGGAATCATGGTGCCTGGAGAAATGGAAGGAGTTGAAATGAATTACTATGGTATACTAGTTGATGTCTTAGACTTAGAATATAGCAATGGAAGACATGTGATCCTTTTCAAATGTAAGTGGTTTGACATAGACCCTAGGAAAAATAAAGTACGACAGGATTTAGGGTTCATGTCAATAAATACATCTCATTATTGGTATACAGACGAGCTCTTCATATTTGCTACTCAAGCCAAACAAATTTTTTACATAAACGACAATAAACTTGGCAATAATTGGAAAGTTGTGCAAATTGTGCAAAATAAAACCATTTGGGATGTTCCAGAAGTAGATGGAGAAGAAACTAACGATTTAGAGTTGTTGAAAGTAGTTGAAAGGATTGAGGTTGATGAATCTATCCAGGATGCCATATTATGTCGAGATGACGTTGATCCTACTATTGTAGAACATCAAGTTAATCTAGAACAATTGAACCAAAGTGTACCATATTCAGATGACAAATTTATAAATGATGGACCTGAAGATGTAGAAGCATCCACTGAGAAAAGTTCTACTTCAAATCAATATCTAGATTTTGATGATCAAGATAGTGAATAATTGCATGTTTTGATGGTATTCATACAAAATATGTTTAGTGTTATTGTAGAATATGGTGGGGCCAAGTCAAGATCGTCTAGCAGATGAATTAGTTCGGGAAGCTAACACTTTGGCTACAGATCCCGCAGTAGAGGTAGGCACGACCTCCGCATCAGGTGATAATAGTATGTCTAAGGTTGTAGTTGTACATCTAAATATGATTGTAACATATAATTGAAATAGCACATTTGTTGTTCTTGTTACAAGATCAAAAAGGAAGTGTGGGCGAGGACATAGCTGAAATATAAATTTGGATTCATATGTGCAACGTCATAGGCGGATCCCAATTACCATTGATGAGAATGTTGGAAAACCAATAAGCGTCTTCGCTACAAAGTTTAGCAATGCCATTGGGACCGCGACCCGGGACACAATTTCAGTGCGCTGCTCTAAGTGGAAAGATGTATCGAGCGATACCATCGCCACTATAAAGGATCATTTATTGGTAAGTTTTATGTTGTTGTTGTCTTAATATCATATGTGTGTACTTACCATAACTTTTATTGAATATGTAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAACATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTTCTGAATGGCCGGTAAAAGTTATGCATTTACTATACTTATGGTTTACACAAATTAATTGTACTCATAAATTATAAATTTATATAGGACAAGAGGGAGAAGAACAAGAAGAGTAGAGAAGATCTCAGCTTTAACCATTGTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGA ATGCTAACTGAAAATGAGAAACGAATGGCACATTGGTATGTATTTAACAACAGTTCTGAGATAACGTCTCATCGTAGGGAACATTTGAGATTGATTCATACTCGAGCAGACACAACATCAGAATTATCTCAAAGACATCGATCACAATTCCCTAATTGGTTTAAAGACCATGATGCCATATTATGTCGAGATGACGTTGATCCTACTATTGTAGAACATCAAGTTAATCTAGAACAATTGAACCAAAGTGTACCATATTCAGATGACAAATTTATAAATGATGGACCTGAAGATAATATGGTGGGGCCAAGTCAAGATCGTCTAGCAGATGAATTAGTTCGGGAAGCTAACACTTTGGCTACAGATCCCGCAGTAGAGGTAGGCACGACCTCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAACATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTTCTGAATGGCCGGACAAGAGGGAGAAGAACAAGAAGAGTAGAGAAGATCTCAGCTTTAACCATTGTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGA ATGCTAACTGAAAATGAGAAACGAATGGCACATTGGTATGTATTTAACAACAGTTCTGAGATAACGTCTCATCGTAGGGAACATTTGAGATTGATTCATACTCGAGCAGACACAACATCAGAATTATCTCAAAGACATCGATCACAATTCCCTAATTGGTTTAAAGACCATGATGCCATATTATGTCGAGATGACGTTGATCCTACTATTGTAGAACATCAAGTTAATCTAGAACAATTGAACCAAAGTGTACCATATTCAGATGACAAATTTATAAATGATGGACCTGAAGATAATATGGTGGGGCCAAGTCAAGATCGTCTAGCAGATGAATTAGTTCGGGAAGCTAACACTTTGGCTACAGATCCCGCAGTAGAGGTAGGCACGACCTCCGCATCAGGTGATAATAGTATGTCTAAGACACATTTTGATGTGGACCTATCAAAGGGGGTTGTCAATAAGTTCATAAATCGACAAATACAACATTCATTTAAAGAATATAGATCAGAATTGCATAAACACTACTGTAAGTTTGAGAATCCTCTGATTGCTCATGAAAACCCACCAGAAAGGATAGCTAATAAAGAAGATTGGGAGATTCTTTGTGATCGATGGGAGACTTCTGAATGGCCGGACAAGAGGGAGAAGAACAAGAAGAGTAGAGAAGATCTCAGCTTTAACCATTGTTGTGGGTCAAAATCCTTTCTTCAAGTGCAAAATGAATTGGTATGA MLTENEKRMAHWYVFNNSSEITSHRREHLRLIHTRADTTSELSQRHRSQFPNWFKDHDAILCRDDVDPTIVEHQVNLEQLNQSVPYSDDKFINDGPEDNMVGPSQDRLADELVREANTLATDPAVEVGTTSASGDNSMSKTHFDVDLSKGVVNKFINRQIQHSFKEYRSELHKHYCKFENPLIAHENPPERIANKEDWEILCDRWETSEWPDKREKNKKSREDLSFNHCCGSKSFLQVQNELV Homology
BLAST of Clc07G06445 vs. NCBI nr
Match: XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia]) HSP 1 Score: 144.8 bits (364), Expect = 9.6e-31 Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Clc07G06445 vs. NCBI nr
Match: TYJ96742.1 (uncharacterized protein E5676_scaffold986G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 133.3 bits (334), Expect = 2.9e-27 Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0
BLAST of Clc07G06445 vs. NCBI nr
Match: KAA0062811.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 133.3 bits (334), Expect = 2.9e-27 Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0
BLAST of Clc07G06445 vs. NCBI nr
Match: KAA0045598.1 (uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 9.3e-26 Identity = 80/228 (35.09%), Postives = 116/228 (50.88%), Query Frame = 0
BLAST of Clc07G06445 vs. NCBI nr
Match: KAA0045598.1 (uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-09 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
HSP 2 Score: 117.5 bits (293), Expect = 1.6e-22 Identity = 51/104 (49.04%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Clc07G06445 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.6e-31 Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Clc07G06445 vs. ExPASy TrEMBL
Match: A0A5D3BA62 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00340 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27 Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0
BLAST of Clc07G06445 vs. ExPASy TrEMBL
Match: A0A5A7VAV0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold357G00300 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27 Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0
BLAST of Clc07G06445 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.5e-26 Identity = 80/228 (35.09%), Postives = 116/228 (50.88%), Query Frame = 0
BLAST of Clc07G06445 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 5.9e-10 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
HSP 2 Score: 117.5 bits (293), Expect = 7.9e-23 Identity = 51/104 (49.04%), Postives = 79/104 (75.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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