Clc07G06300 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGACGCTCTCACAACCATCGTTAAACCAGGATCAAAGTGGAACACTTCCCCAAAGGCCATTCATACATTGGCGCCAACTTGCTTGATCGCCGAGGCCAACCTGTGGGTTTACTTCATCAAGCTGTCGCTACACCTTACAACGCATGACGCCTCAATATCAAGGGACTGTGCCATGGTCATTTACTGCATCATGCGGGGAATTCGACTAGACGTGGGACGCATCATTGCCCCACAAATTTGGGGGTTGTTTTTCAAGCCAAGGGGTCTGTCACACCCTCTCCCGGATTATCCTCCAAAACCCGAGAGGAGATGTGAAGACAGCAACCTTGACTCCTCTATAAGGTTCACTGTCCAACCGTTAATCACGTAA ATGAATGACGCTCTCACAACCATCGTTAAACCAGGATCAAAGTGGAACACTTCCCCAAAGGCCATTCATACATTGGCGCCAACTTGCTTGATCGCCGAGGCCAACCTGTGGGTTTACTTCATCAAGCTGTCGCTACACCTTACAACGCATGACGCCTCAATATCAAGGGACTGTGCCATGGTCATTTACTGCATCATGCGGGGAATTCGACTAGACGTGGGACGCATCATTGCCCCACAAATTTGGGGGTTGTTTTTCAAGCCAAGGGGTCTGTCACACCCTCTCCCGGATTATCCTCCAAAACCCGAGAGGAGATGTGAAGACAGCAACCTTGACTCCTCTATAAGGTTCACTGTCCAACCGTTAATCACGTAA ATGAATGACGCTCTCACAACCATCGTTAAACCAGGATCAAAGTGGAACACTTCCCCAAAGGCCATTCATACATTGGCGCCAACTTGCTTGATCGCCGAGGCCAACCTGTGGGTTTACTTCATCAAGCTGTCGCTACACCTTACAACGCATGACGCCTCAATATCAAGGGACTGTGCCATGGTCATTTACTGCATCATGCGGGGAATTCGACTAGACGTGGGACGCATCATTGCCCCACAAATTTGGGGGTTGTTTTTCAAGCCAAGGGGTCTGTCACACCCTCTCCCGGATTATCCTCCAAAACCCGAGAGGAGATGTGAAGACAGCAACCTTGACTCCTCTATAAGGTTCACTGTCCAACCGTTAATCACGTAA MNDALTTIVKPGSKWNTSPKAIHTLAPTCLIAEANLWVYFIKLSLHLTTHDASISRDCAMVIYCIMRGIRLDVGRIIAPQIWGLFFKPRGLSHPLPDYPPKPERRCEDSNLDSSIRFTVQPLIT Homology
BLAST of Clc07G06300 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 84.7 bits (208), Expect = 6.0e-13 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Clc07G06300 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Clc07G06300 vs. NCBI nr
Match: XP_038882424.1 (uncharacterized protein LOC120073695 [Benincasa hispida]) HSP 1 Score: 71.2 bits (173), Expect = 6.9e-09 Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Clc07G06300 vs. NCBI nr
Match: XP_038898613.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]) HSP 1 Score: 61.6 bits (148), Expect = 5.4e-06 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of Clc07G06300 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 7.1e-06 Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of Clc07G06300 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06 Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of Clc07G06300 vs. ExPASy TrEMBL
Match: A0A5D3BB37 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold282G00030 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.9e-06 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Clc07G06300 vs. ExPASy TrEMBL
Match: A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-05 Identity = 29/89 (32.58%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of Clc07G06300 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-05 Identity = 37/106 (34.91%), Postives = 51/106 (48.11%), Query Frame = 0
BLAST of Clc07G06300 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04 Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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