Clc07G05560 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G05560
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Choline-phosphate cytidylyltransferase
Location	ClcChr07: 7592992 .. 7604008 (+)
RNA-Seq Expression	Clc07G05560
Synteny	Clc07G05560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCCATCTCCAAAAACTCCCAATCCTTCACTTTGATTCTCTCACAATTCTCTGGCCATTTCCCAGCAACCCAAACACCTCTCTCACCAAAATCTCTCTTTCTTTCCCATGCCACAATTTTAGAACCCGTCTCCGCCACGGCTGCAACGGTTGTGCTGCTCGGCGGAGAGTTCGCTACGACAACGATAAAGATAAAGATGAGGATTACGGCCACAACGACCAGATTGCACTATTGGAGTCCTACACTCAAGCTGCCACCGGCGAGGCCCTCATTGTTCACGCCGCGGTTGATGGCGACCATGTTGAAGTTCTTGTCTTTAAGGTTTTTCTTACATTGTTTCTTTGTCTCATATGGCTTCAAGTTTATTTTAGGTTAAATCTCAATTTTGACCTTATAAATTCTTAATGTGGTCTAGTTTTAATCCATATGATTTAGTTTGGATTTGGTTGAAAATTATTCTAAGTGGATAGAGCTGTATTTATTCCTAATTGAGTTGGGTCCAATAAGGTTAGTTTTTAGAAAGTTTTGGATTATAAAATTTAGGCTAATTTTGAAATAAATTATGCATTTAAATCAACCTTCATCTTTTAATTTTAGGTTAATTATATATATTTGATATGGTAAAGACAATTATGATGGTGTTGAATTTATATGGTTTAACCAAACTATGAGACCATGTAGTTAAATTGAAACTTGTAAAGCAAATAAATAAATAAATAAATATGATTTAGCTGTAAAGAAAGAATGATTTGAAAATGAATTTGTGTGAAAAACAGGGATTCTCATCATGCTTGAGCTATGGGACTTCACCTGATCCATCAAGAAGTGTTCTTCCAGCCAGAGCAGTGATTAAATCTATAGATAGAATCAAAGGGCCATTTGATCCATCAAATATTGAATACCTTGAGAAGGGTATCACTTGGGAATCATTTAACTTCCCCAAATACTTCAACTTCTAAAAACTTTCAGTCTCTATTTTTTATATTCTATTTTATTCAAAATTTGTCCTCTACATTTATATACATTGATTATGTTCTTGTAAAGAAAACTTCCAAAATCAGAATATTTTTAGTATTTTGACTGTAGGGGTATAAATGGTACTATGTCTTCCCCATTTCAAATTTTGTATGTAGTTTTGATATTTTCTTTATTTGTTTTTCTAAAATGGCCTATAACAATTTCAAACTTTTTTTCTTCTCCTATATTTTTACAATTTAAGATTTTTCTTGTTAAGAATTACAATTTAAGAAGTTTTACATAATTTCTACCTTAAAAACTTGAATTACCCTATTTTTTCTTTTTTACTCTGTTTTCTTCTAGTTTTTCTTTTCTTTTTTTTTTTTTACTTTTTTTTAAAATTCTTCCATGAATAAACTTGAATTTGAACTTATTTTATTTTATTTTCTTTTAATTTACTATATTTTCTTCTTATCATTTTTTTTCTTGCGGCAATTTTTGTAAGACTTTTTGTTTTCCTTTCTTTTTTTATAAAAAATTCTCTCGTAACTTATGCTCCAACTTTATCATCAACTATAATTTGCAAAGTGATTTGACTCTTGCTAGAGACATCGGATGATTATTGGTGGTCACCAATTCTACCAATAGTGATTTAACTCCTATTATGGATATCATTTTTTTGGGTAGCTTAAAAGTTTTGGGGCTAAGCCCAACAAGTGCTCATAAGGTAGATAGGAATCATTAAGTGCACAGTATCAATCAATGTACGTATTATTATAAAATATATCAATAATAACTAACTTTAACATTTCATTTGGAAAAATAGTAAAAAATTTTAACAATTATAAAAATGGCAATCGAATTTTAAAAAACAAATAGGGATATTTTCAAAAATAGAAAAACTATTAAAAATAATTACAAATATAGGATAGAAAGCGATAGACGTAGATAATGGTCTATCACAGATAAAAAAAAATAAAATTTTGTTATATATATAAATAGTTTGATATTTTTTTTCAATTTATAATAAATTTTCAAATAAATAACTAATTTTCAAATGTCCTAAAGGTCGAACCATGGGAATTAGAGGGTGTAACACACATTCTCATAAATACACCTTAATTAAACCAAATATATATATATATATATATTCAAAATATTTTCTACGAGATAGAACACATGGAAAAAAGCATTCAAATTTCAGCAATTCAAAATAGTTGGTTGAACTCCCCATATCGAACCTTTCTATTCTCTTTCACTATAATCAATAAACCCTTCTCCATTGATAACCCCCAGAATCAAAGGTCTTCTTCCTAAATCAAATCAGTTTCCATCCATCCAAAACCCAAACAAATTAACCGATGGAAAAACAAGAATTTGGAAGTGAGATCGTCCATTAGCCACAATTTCCAAAGGAGCTACAACACCTTCAATAAACAAGCTTCAACCTAATGATTCGCATTCATTAGGGACTCATGTACGCTCCACATTCCTAAAAAACTACACAATACAAAGCTACGCCATACATAAGTTTAAAAAAAAATGTATGACAGTGATCTATAATTTTGATAAATTAATGGCACCTACAAAAAATCAACATTAGAAAAATAACAAGATTGTTGTAAAATTTGAGAACCAAAAATGATGGAAAAACGAGAGCACAAAAATTGAGAAATTATAATATTAAAATAATAAAATAAATATAATAATTAAAGAAAATAAAATAACTAAATAAACTAAAATAAATAAATTGTAATTTTAAGGAAAGTGGAAATCTCTCCAATCCTTTCTCTTCTTTTCTCTCCAATTTGTGATTTTTCAACATCCACAAAACGCCTCTATTTATAAGCAATTTGACAGGTAGGTGGTGTCACTTCATGGCCACTAAGTATGTGTCATTAGGATATACATGACCTTTAGACACTAAACTTGGCTACACAATGGACATCTTCTCCTAATATTTATAATACTCCCCCTTAGATGCCCATTATATACATATGAAATATTTCTCGTTAAAACCTTACTAGCAAAAAACCCAATAGGAAAAAAATTCTAGTGAAGGAAAAAAAAGTACATATTTTATATAATCTAATACTTTTAAAAGAATACAATACATTTGCTCCCACTCATAAGAACATTACTTGAGATCTCTAAGTCGCCGCATTTTAATGATCTACACCAATTTTTCAAATGTTGTGATAGGTAATGCTTTTGTAAATAAGTCTGCCAAGTTATCCCTTAAACAAATTTGTTGTACAGTGATGTCATCATTTTTTTCAAGATCATGAGTATAAAAAAGTTTTGTGAAATATGCTTTGTTCGATCTCCTTTAATAAATCCTCATTTGATTTGAGCTATACATGTTGTGTTGTCTTCATATAATGTTGTTGGAGGAACTTTACTAGAAGACAAGCCACATGTTTCACGAATGTGTTGAGTCATTGATCTTAGTCATACACATTCTCTACTAGTTTCATGGATTGCAAGAATTTCAACAAGATTTGAGAAAGTAGTTGTTATGGTCTGTTTCACTGATCGCCAAGATATAACAGTTACTCCACATGTGAACAGATAACCTGTTTGAGATCTAACTTTGTGTGGATCAAATAAATATCCAGAATCTACATAACCAACTAAATCAAAATTCGATTTATTTGAATAAAACAAACTCATATCGATCATTCCTTGGAGATAACGGAATATATGCTTAATTTCATTCCAATGTCTTTTTGTTGGAGAAGAACTGTATCTAGCTAATAAATTTACTAAAAATGCAATATCTAGTCTTGTATTATTAGCAAGATACACAAGTGCACCAATTGCACTAAGATATGGTACTTTAGGACCAAGAAGTTATTCATTATTATCTCGAGGTCAAAATATACCTTTCTTCACATCTAGTAAACGAACTTCCATTGGAATGTTTAATGGATGTGTTTTGTCCATATAGAATCTTTTTATAATTTTTCCTGTATAGGTTGATTGATGAACAAATATCTCATTTGCTAAATGCTCAGTTTGCAATCCAAGGCAAAAAAAAAAAAAAAAAATCTGAGATCTTTCATATCAAATTTTTTTCTTAAGATATTCTATTGCCTTTGAAAGCTCTTCAAGAGTTTCAATTAATTTAGATCATCAGCATATACAGATATAATAGCAAATTCTGACTGTGATTTCTTTAAAAAAACACATGGACATATTGGATTATTTTGATATCCTTATTTCAACAAATATCCACTCAGGCGATTATACCAGATTTGTCCTGATTGTTTCAATCCATATAGTGATCTTTATAACTTTATTGAATATAATTCTCGAGAACTTGACTTATATATTTCAGGTATCTTAAATACTTCTAGGATTCTCATATAAATGTCATTATCAAAAGATCCATATAAATATGTTGTGACTACATCCATAAGATGCACGTTTAGATTTTCATACACAAACAGACCAATTAAATATCTTAATGTAATTGCATTCACCACTGGAAAATATGTCTCCTCATAATCAATACCAGGTCCTTGTGAAAAACCTTGTACAACTAGTCTTGCTTTATATCTTATGACCTCATTATTTTCATTTCTTCTTCTCATAAATACCCATTTGTATCCCAAAGGTTTGACATACTTGACGTTTTGAAAGTGAGTTTAATTCTGCCTCGATTGCTTCGTTCCACTGAAGTCAATATTTTCTATGTCAACATTCCTCAACAGATTTTGGTTTAGGATTCTCATTTTCATATATAATATCAAGTGCAACATTATATGCAAAAATGTTATCAATAACTATATTAGTTCGATTCCATCTTTTCCCTGTCATGACATAATTTATTGAAATCTCATTATTATCTTTAGGTATTTCACCTTCTTCACTAATTGTATTATTAGTTATGTCCAGGGTTTCTTCATGGATATTTACATCATCAACCAAGTCTTTTTTACTATCATTTATTTCTCTTTTCTAAGGATTCGCTTCTGGCGTGTTCCAGACTCATTAGTGACAACTTGCTGTGTTGAGATATCAATTTTTTACGAAACATTTGCAATGGGTATATGTGATTTAGTTGCTTTCTTTGCATCTATAAATGCATCTGGTAATTGATTTACTATATTTTACGAATTAATTATTTTATGAAATTCAAGTTCACATTGATTTGTACGGGGATCTAAATGAGAAAATAATGATGCATTCCATGCAATTTCCTTTTCCAACTTAATTCCTCCCCTAATGTTGGAAAGTTTGTCTCATTAAAATGACAATCAGCAAATCATGCAGTAAATACATCACCCATCAGGGTTCAAGATATTTAATAATTGATGGGGAATCATATCCAACGTATATTCCTAACCTACTTTGAGGACCCATCTTAGTACGTTGTGGTGGAGCAATTGGAACATATACTGCACATCCAAAAATTTGCAGATGGGAAATATTTATCTCCTAGCCATAAGCTAATTTTAATTGTGAGTATTTATGATAAGCTACTGTCCTAATGTGTGCAAGTGACGCAGCATGCAAAATAGCATGTCCCCATACAGATGTAGGTGTTGGGTTGTATGTCCTAAAACTCGTAGTTTTTGTAAATAGGTGATTTTTAGTACATATGAAGTTATTCAAGTGAATTAATTATTTATCAACTCTAAATCCAATTAAACTACGAACCCTTGGCTACTATCATGAGTACTTGGACTTTATGTGGAGACATAAACAGGATCAAGTTCGAGTAAGTAGCCTCAATAGTCTATAGTACATGAATTAGGTTGGGTACCTCTTCCTGGAGACACTATTGAATACGACCCGCTTCATGATTGTTACAAATGTTGTAAAGTGTCATAAATGAAGTGATTCTGATTTGATCATGTAGAGACATGTGAGCGGGGTATTCTACATAATGAGATTGTGTAAGACTGACCTTGAAATAATTACTGTTACGTATTAACACCGTTTACGATTAACACTGATTAATTTCACTTATCGATGACCTAGATAGCGGGGTATTCTACATAATGAGATTGTGTAAGACTGACCTTGAAATAATTACTGTTACGTATTAACACCGTTTACGATTAACACTGATTAATTTCACTTATCGATGACCTAGATAACTTGATCTGAATCTTGAGTTATCTATGAACTCCTATTTATTTAGAATTATCCCTTGATCTACATAGGTAAGAGTAAGCTCAATAACGCTGCTCAACATTCCTCCTATTTCAGGGATAAGACTGGGTAGATAGTTGGGAACATAGAATTTGCAAAACGGAATTCACTCCTACCCAACTTAGGGATAGAAGAGAGGTTGTTCTCTTAAGTGTTGTTCCCAGGACTTGAACAAGGGGCCCCATCCTCTCACTGGCCCGAGAGGGAATGGATTTAGTGATTAGATCTTAAATTAATTGTTCATTAGAGGGACAATGGTACTTAAGGAGAAAAGATGTAACTCAAAGGTAAATCGGTATTTGACCTAGCTGAAGTTATGAACAACTTGTGAAGGATTGACTTATCGATGACGGTTATATCAAATGGACACAAATATATCTACAGTGAGGAGAGTGCAACTACCGGGCTTTAGTGGAGTGTCCCGTTAGTTAACGAATGTTGATTAACTAGGTTAAAGAGTTTGGCCGGTTAATCTCGGATCGTTGGAGCTCATGATCTGTAGGTCCATTAGGTCCCTCTACTAGCTCATAAATGGACTAAAATCTTAGATAATGTGGTGAATAAGTTTGAATCGTTCAAATCTTGGCTTAAGGAATGAAAGTTAGATATATACGATATATCGACGTTTAATTACGAATTAAACGTACAAATAGAGTTAATTATAATATTTAAATATAATTTAAATATTAATCATATGAATAGGGATTCATATCGGTTTTTTTTTAGAAAAATCGAGACAAGTGGGAAAAATAATATTATTTTATTATTTAATATTAAAATAATATTAAAATAATAATATTTAATTAATTAAATATTAAATTATTTTTATTTAATTATTTAATTATCTTTTTGAAATTAAAAATCAATTTTAATTCAATTTTGGAAATTCATTGAAAATTGATTTTAAAATTGATTTTTGAAGATTGGATTTTCCCACTAACTAAGCTAGGAGCTTGGTTGTCTTCTTCACAATTAACCAACAAATTAACCATTTTGTGTTGTCAAATTTTGATGCAATTGGATTGCATGTTATTCTTTAATAAATAGAGATGATTTTGACATAAAAATGGTTAAGAATTTTGTGAAATTAAGGATTAATTTTGCTAAATTTTATCCATTGTTCATCTTCTTCCAACCTTCATTCTTTCTCAAATTCACCACAAATTTGGATCCCACCATCCAATCTAAGCCTAGAGAATAGTAGAGAAGACTCTTGTGGTGGTCTACAACCAAGTGGTGCTGAAATTCATCAAGAATTGAAGGAGAATTTGGAGCTTCAAGGGTAAGTGTTCTTGAAACTTTGGTTTTTCTTCTTAATTGCATTTTTAATCCTCTAAATTGAGCATCTTAGAGTGAAAATTTATCAAATTAACTTCTACTGCATGCTCATTAATCCATCAGTAGGAAGCTTAGGTCTCATAAATAATGGTCTAGCAATTAATTGCAAACGTTTTATAAATGATTCTGCTAAACCATTTTATGTATAAACATGAGCTACAGTATGTGCAACATTTATCCCAATTGATATACAATAATTATCAAAAGTTTGGGATGTAAATTCACCAGAATTATTAAGACGAATGGTCCTAATTGTATAATCAGTAAATTGTGCTCTTAACTTAATTATTTGAGGAAGTAATCTTGTAAATGCAAGGTTTTGACTTGATAATAAGCACACGTGACCATCTACTAGATGCGTCTATTAATACCATAAAATATTTAAATGGTCCACTTGGTAGGTTAGTAGGTTAACATATATCACCATGAATTCGTTCTAAAAATGCAAGTGATTTAGTCCCCACTTTAACTAGTGATGGTCTAATTATTAATTTTTCTTGAGAGCAAGCATCATATAATAATTCACTAGATTATATTGAAGAATCTTCTAGTTCTTCAATGGGTGTCCATATAGATCCTAGATGACCCAACCGATCATGCCAAATTGTAAATATATCTAGATTCATGAACTTCAGGTTCATTGTTGCATATGTTTTAATGACTCGTATATAAGTACAATATAATCCAAAAGATAAAGCAGACAACTTTTCCAATATAGGTTTTTCATGTGAGACAATAGATATGATATACAGATATTCTATCTGATTTTTTCTATCAGTCTCAATATGATAACCATTGCAACGTATATCTTTATAACTTAATAGATTTCTCTTTGATTGACTAGAGAACAATGCATTGTTAATTGTAAATTTTGTTCCCTAGGCAAAATAATATTTGTTTTTCCAAACCCTTCAATCAAGTTTGCAGAACATGATATTGTATTGAACTTTGCTTCTAGCATTGTCAATTTGAAAAAATATTTTATATTTGTAAGTATTGTATGTGTAGTTGCACAGTCTGCCAGATATAGATATTCATTTCTCATTTTTGAGTCATTCAACATATGAAAATTGTCCATGATTTTCATTTAACCAAGATAATTACAATAAGAAAAACAAAACTTGAAATACAAAAAAGTTTAACTTTAAAAAAAAAAACATTAAAGATAGATAGACAAAACAAACAACATTAATTATAAATATTCTCAAAATCAAATGAGACACTTGCTATGTCATCATTTGTGCTGATTTTCTCTTTAAGAGATTCAAAGAAGTCTGTCACATCTAAATTTGTTATACTTGATGGGTCATACATATCATTATCCTAGTATGCAAAATTTGCTTCCACATTTTTCCCTTTTTCCTTCCAAGAAGCTTGATAGAGATCAACAAGGTGTTTTGATATACGGCAAACACGAGACCAGTGCCCAGTCATCCCGCATCGAAAGCATTTATACTCATCACCTTTTGAATTTTTATCTTGTAGAGCTTTTACTTTATGATCATCATTTTGTGTGGTTCTTTTGAAATTTGGATGATTAGAATGACCACCACGAAAATAATAACTATTTCTTCCTCTGCCATGGTCACGACCTCGACCACGACCACGACCATGACTTTGACCACGATTATTAAAATTTACCGCATTCACTTCAGGGAATGGTGTTGTTCCAGTTGGTCGAGATTCATGGTTCTTCATCAATAGCTCATTATTTTGTTCAGTCACGAGGACATGAAAGTAATTCAGAATATTGTTTAAAACTTTTCTCTCGATTGCGGTTGCAAGAGCATATTCGAGGCATGAAATGTAGAAAATGTCTTCTCCAACATATCTGCATCAGTAATTTTCTCTCCGCATAACAATAATTTTGAACTAATTTTAAATAATGGGAATTGTAGTCACTTACTGATTTGAAATCTTGGAGCCTCAAATGCATCCATTCATAACGAGCTGTAGGAAGAATGACTGTTTTCTGATGATCATATCTCTCTTTTAAATTCTTCCACAAGATATAAGGATCTTTTATTGTTAAATATTTCATCTTTAATCACTCGTGGAGATGATGGCAAAGGAAAATCATAGCTTTTGATTTTTCCTTAATGTATGTTGTATTTTCCTCTTTAATTGTTTCTCCCAGGTTCATAGCATCTAGATGTGTTTCAGCATCAAGCACCCATGACAAATAATTATTTCCGTTGATGTCAAGGGCTGCAAATTCTATTTTTGTAAGATTTGTCATGATAACACTATCACAAATAATTATATTTATATTAGCAATTTAATATATACTAAACATGCAAAACAATGTTCAATTTACTAATTATAATAAAGAGAAAATGGCATGCCCTTCAAAACCTACCTTTAGGAAAACAATAAGAGCACGTGCTGATAACATGTTGTAAGATTAAGGAGCAAAATGACAGAAAAATTGGAGCACGAAAAATCAAAAAAATTATAAAATTAAAATAATAAAATAAATATAATAATTAAAGGAAATAAAATAACCAAATAAACTAAAATGCAGAAATTGGAATTTTATGGAAAGTGGAAATCTCTCAGATCCTTTCTCTTCTTCTCTCCAATTTGTGCTTTTTCAACATCCACAAAATGTCTTTATTCATAGACAATTCGGCAAGTAGGTGGTGGAACTCCATGGCCAATAAGGATGTGTTATTAGGAGACACATGACCTTTAGACACTAAACTTTGCTACATAATGTAGATCTATTTTCTCATAATATTAATAATAAAAATAAATATTAATGGCCAAATTTAAAAATGGAAAAGGTAAGATATTGTCAGAATTAAAAAATAAAATATAGATTCGAAGATTTCTTATATTTAAACTGTAATTTGAGCTAAATAACCACATGGAAAGAGAGTGTATTCATGCTAATCCGAATAGAAATACAGAGTCCAAATTATGAATTTAAAGAATTAATTACAGTAAAATTAAAGATGCTAATAAGGGTATTTTAGGATTTAAAAAAAAAAAAAAAAAAAAAAAAACTCACATGCAAAGCAAACATGTTGCTATAAATTTTAAATTTCTCGATATTATTATATTTACAAATGAATCTATAATTGATGTTACAAGATCCAATTTTCCTATAAAAATAGGGTACCATCTCAAAACCAATCGACAATTAGATGAATAGTCTATGTATCTATAAGTATTGAAATGTCTTCTAATTTTTTCAACGTAAGATCTTCAATACAATTCAACTAAGAAACTTGTTCCTACATCTAATTTTAATTTCTTTTTTTAAAAGATCATACACGAAGAACTAATAAGAAATAATAGAATTATAATCCGCCTCAACAGGTAGATCAAATCAGGAAAATCTTTCTCACCACACCCTTAAGAACATTATTAAGAGAGCTGACTAAAGCTAAAAGTTATATGTATTGTTATATTGGTTACAACTGAATACTTGCTTTTACTTTTTTGTTTTTCAGTTGTAATTGCTTTGTTTACTTCTTTTCACACATTGCTTCTTCTATTTAAAGAGCAATGTGCAGATCACTTCTTCATCAATAATATGCATCATTAA

mRNA sequence

ATGGCGACCCATCTCCAAAAACTCCCAATCCTTCACTTTGATTCTCTCACAATTCTCTGGCCATTTCCCAGCAACCCAAACACCTCTCTCACCAAAATCTCTCTTTCTTTCCCATGCCACAATTTTAGAACCCGTCTCCGCCACGGCTGCAACGGTTGTGCTGCTCGGCGGAGAGTTCGCTACGACAACGATAAAGATAAAGATGAGGATTACGGCCACAACGACCAGATTGCACTATTGGAGTCCTACACTCAAGCTGCCACCGGCGAGGCCCTCATTGTTCACGCCGCGGTTGATGGCGACCATGTTGAAGTTCTTGTCTTTAAGGGATTCTCATCATGCTTGAGCTATGGGACTTCACCTGATCCATCAAGAAGTGTTCTTCCAGCCAGAGCAGTGATTAAATCTATAGATAGAATCAAAGGGCCATTTGATCCATCAAATATTGAATACCTTGAGAAGGTTGTAATTGCTTTGTTTACTTCTTTTCACACATTGCTTCTTCTATTTAAAGAGCAATGTGCAGATCACTTCTTCATCAATAATATGCATCATTAA

Coding sequence (CDS)

ATGGCGACCCATCTCCAAAAACTCCCAATCCTTCACTTTGATTCTCTCACAATTCTCTGGCCATTTCCCAGCAACCCAAACACCTCTCTCACCAAAATCTCTCTTTCTTTCCCATGCCACAATTTTAGAACCCGTCTCCGCCACGGCTGCAACGGTTGTGCTGCTCGGCGGAGAGTTCGCTACGACAACGATAAAGATAAAGATGAGGATTACGGCCACAACGACCAGATTGCACTATTGGAGTCCTACACTCAAGCTGCCACCGGCGAGGCCCTCATTGTTCACGCCGCGGTTGATGGCGACCATGTTGAAGTTCTTGTCTTTAAGGGATTCTCATCATGCTTGAGCTATGGGACTTCACCTGATCCATCAAGAAGTGTTCTTCCAGCCAGAGCAGTGATTAAATCTATAGATAGAATCAAAGGGCCATTTGATCCATCAAATATTGAATACCTTGAGAAGGTTGTAATTGCTTTGTTTACTTCTTTTCACACATTGCTTCTTCTATTTAAAGAGCAATGTGCAGATCACTTCTTCATCAATAATATGCATCATTAA

Protein sequence

MATHLQKLPILHFDSLTILWPFPSNPNTSLTKISLSFPCHNFRTRLRHGCNGCAARRRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSCLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKVVIALFTSFHTLLLLFKEQCADHFFINNMHH

Homology

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BLAST of Clc07G05560 vs. NCBI nr
Match: XP_038892698.1 (uncharacterized protein LOC120081685 [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72
Identity = 143/157 (91.08%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWPFPSNPNTSLTKISLSFPCH---NFRTRLRHGCNGCAARR 60
           MATHLQKLPILH DSLTILWPFPSNPNTSLTKISLSFP H   NFRT LR G NGCAARR
Sbjct: 1   MATHLQKLPILH-DSLTILWPFPSNPNTSLTKISLSFPIHKSLNFRTLLRRGRNGCAARR 60

Query: 61  RVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSCLSY 120
           RVRYD D D+DEDYGHNDQIALLESYTQA  GEALIVHA VDGDHVEVLVFKGFSSCLSY
Sbjct: 61  RVRYDEDDDEDEDYGHNDQIALLESYTQATAGEALIVHATVDGDHVEVLVFKGFSSCLSY 120

Query: 121 GTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           GTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK
Sbjct: 121 GTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 156

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BLAST of Clc07G05560 vs. NCBI nr
Match: XP_008452414.1 (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo] >KAA0056805.1 uncharacterized protein E6C27_scaffold486G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 4.2e-63
Identity = 127/158 (80.38%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWPFPSNPNTSLTKISLSFPCH---NFRTRLR-HGCNGCAAR 60
           MAT+L K PILH +SLT L+PFPSNPNTSLT I  SFP H   NF+T +R  G  GCAAR
Sbjct: 1   MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR 60

Query: 61  RRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSCLS 120
           RRVRYD+D+D+DEDYGHNDQIALLESYTQAATGEALIVHA VDG+HVEVLVFKGFSSCLS
Sbjct: 61  RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS 120

Query: 121 YGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           YGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y+EK
Sbjct: 121 YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEK 158

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BLAST of Clc07G05560 vs. NCBI nr
Match: XP_004142303.2 (uncharacterized protein LOC101213440 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.0e-53
Identity = 120/161 (74.53%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWP-FPSNPNTSLTKISLSFP----CHNFRTRL-RHGCNGCA 60
           MAT+  K PILH  SLT L+P  PSNP  SLT    SFP      NF+T L R G N CA
Sbjct: 1   MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60

Query: 61  ARRRVRY-DNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSS 120
           ARRRVRY D+D+D+DEDYGHN QIALLESYTQAATGEALIVHA VDGDHVEVLVFKGFSS
Sbjct: 61  ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
            LSYGTSPDPSRSVLP RA+IK IDRIKGPFDPSNI+Y++K
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQK 161

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BLAST of Clc07G05560 vs. NCBI nr
Match: XP_022985163.1 (uncharacterized protein LOC111483247 [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 1.0e-53
Identity = 117/162 (72.22%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSL-TILWPFPSNPNTSLTKISLSF-----PCHNFRTRLRHGCNGCA 60
           MA HLQ  PILH DSL T+L PF  + NT+ TKIS SF        NFR R R   N CA
Sbjct: 1   MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKISFSFSFTIHDSLNFRPRRRQRPNDCA 60

Query: 61  ARRRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSC 120
           ARRRVRYD+++D+DE+YGHN+QI+LLESYTQAA GEALIVHAA+DGD VEVLVFKGFSSC
Sbjct: 61  ARRRVRYDDEEDEDEEYGHNEQISLLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSSC 120

Query: 121 LSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKVV 157
           LSY TS DPSRSVLPARA I+SIDRIKGPFDPSNIEY++K V
Sbjct: 121 LSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQKGV 162

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BLAST of Clc07G05560 vs. NCBI nr
Match: KAG7031485.1 (hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.4 bits (555), Expect = 5.2e-53
Identity = 118/161 (73.29%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSL-TILWPFPSNPNTSLTKI--SLSFPCH---NFRT-RLRHGCNGC 60
           MA HLQ  PILH DSL T+L PF  + NT+ TKI  S SF  H   NFR  R R   N C
Sbjct: 1   MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITSSFSFTIHDSLNFRARRRRQRLNDC 60

Query: 61  AARRRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSS 120
           AARRRVRYD+++D+DE+YGHN+QIALLESYTQAA GEALIVHAA+DGD VEVLVFKGFSS
Sbjct: 61  AARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           CLSY TS DPSRSVLPARA I+SIDRIKGPFDPSNIEY+E+
Sbjct: 121 CLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIER 161

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BLAST of Clc07G05560 vs. ExPASy TrEMBL
Match: A0A5A7UTE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G001040 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.1e-63
Identity = 127/158 (80.38%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWPFPSNPNTSLTKISLSFPCH---NFRTRLR-HGCNGCAAR 60
           MAT+L K PILH +SLT L+PFPSNPNTSLT I  SFP H   NF+T +R  G  GCAAR
Sbjct: 1   MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR 60

Query: 61  RRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSCLS 120
           RRVRYD+D+D+DEDYGHNDQIALLESYTQAATGEALIVHA VDG+HVEVLVFKGFSSCLS
Sbjct: 61  RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS 120

Query: 121 YGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           YGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y+EK
Sbjct: 121 YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEK 158

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BLAST of Clc07G05560 vs. ExPASy TrEMBL
Match: A0A1S3BTQ8 (uncharacterized protein LOC103493452 OS=Cucumis melo OX=3656 GN=LOC103493452 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.1e-63
Identity = 127/158 (80.38%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWPFPSNPNTSLTKISLSFPCH---NFRTRLR-HGCNGCAAR 60
           MAT+L K PILH +SLT L+PFPSNPNTSLT I  SFP H   NF+T +R  G  GCAAR
Sbjct: 1   MATNLHKTPILHSNSLTNLFPFPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAAR 60

Query: 61  RRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSCLS 120
           RRVRYD+D+D+DEDYGHNDQIALLESYTQAATGEALIVHA VDG+HVEVLVFKGFSSCLS
Sbjct: 61  RRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCLS 120

Query: 121 YGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           YGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y+EK
Sbjct: 121 YGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEK 158

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BLAST of Clc07G05560 vs. ExPASy TrEMBL
Match: A0A6J1JCS8 (uncharacterized protein LOC111483247 OS=Cucurbita maxima OX=3661 GN=LOC111483247 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 117/162 (72.22%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSL-TILWPFPSNPNTSLTKISLSF-----PCHNFRTRLRHGCNGCA 60
           MA HLQ  PILH DSL T+L PF  + NT+ TKIS SF        NFR R R   N CA
Sbjct: 1   MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKISFSFSFTIHDSLNFRPRRRQRPNDCA 60

Query: 61  ARRRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSSC 120
           ARRRVRYD+++D+DE+YGHN+QI+LLESYTQAA GEALIVHAA+DGD VEVLVFKGFSSC
Sbjct: 61  ARRRVRYDDEEDEDEEYGHNEQISLLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSSC 120

Query: 121 LSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKVV 157
           LSY TS DPSRSVLPARA I+SIDRIKGPFDPSNIEY++K V
Sbjct: 121 LSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQKGV 162

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BLAST of Clc07G05560 vs. ExPASy TrEMBL
Match: A0A0A0KJ82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021310 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-54
Identity = 120/161 (74.53%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSLTILWP-FPSNPNTSLTKISLSFP----CHNFRTRL-RHGCNGCA 60
           MAT+  K PILH  SLT L+P  PSNP  SLT    SFP      NF+T L R G N CA
Sbjct: 1   MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60

Query: 61  ARRRVRY-DNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSS 120
           ARRRVRY D+D+D+DEDYGHN QIALLESYTQAATGEALIVHA VDGDHVEVLVFKGFSS
Sbjct: 61  ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
            LSYGTSPDPSRSVLP RA+IK IDRIKGPFDPSNI+Y++K
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQK 161

[Close]

BLAST of Clc07G05560 vs. ExPASy TrEMBL
Match: A0A6J1FWQ3 (uncharacterized protein LOC111447634 OS=Cucurbita moschata OX=3662 GN=LOC111447634 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 116/161 (72.05%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MATHLQKLPILHFDSL-TILWPFPSNPNTSLTKI--SLSFPCH---NFRTRLR-HGCNGC 60
           MA HLQ  PILH DSL T+L PF  + NT+ TKI  S SF  H   NFR R R    N C
Sbjct: 1   MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITFSFSFTIHDSLNFRARRRPQRLNDC 60

Query: 61  AARRRVRYDNDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGFSS 120
           AARRRVRYD+++D+DE+YGHN+QIALLESYTQAA GEALIVHAA+DGD VEVLVFKGFSS
Sbjct: 61  AARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120

Query: 121 CLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           CLS+ TS DPSRSVLPARA I+SIDRIKGPFDPSNIEY+++
Sbjct: 121 CLSFATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQR 161

[Close]

BLAST of Clc07G05560 vs. TAIR 10
Match: AT2G01755.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 120 Blast hits to 120 proteins in 52 species: Archae - 0; Bacteria - 80; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 4.7e-28
Identity = 60/103 (58.25%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 53  CAARRRVRYD-NDKDKDEDYGHNDQIALLESYTQAATGEALIVHAAVDGDHVEVLVFKGF 112
           C ARRRVR +   +D+DE YG+N+++A+LE Y+Q+   EALIV A VD + VEV++FKG 
Sbjct: 58  CGARRRVRDEGGGEDEDEMYGYNEEMAMLEIYSQSCREEALIVTAIVDDEEVEVVIFKGV 117

Query: 113 SSCLSYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEK 155
           SSCLS  T+ DP+RSVLP RAVI  IDR++GPFDPS I Y+++
Sbjct: 118 SSCLSGETAVDPARSVLPERAVITKIDRVRGPFDPSQIHYIQR 160

The following BLAST results are available for this feature:

BLAST of Clc07G05560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892698.1	2.2e-72	91.08	uncharacterized protein LOC120081685 [Benincasa hispida]	[more]
XP_008452414.1	4.2e-63	80.38	PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo] >KAA0056805.1 unc...	[more]
XP_004142303.2	1.0e-53	74.53	uncharacterized protein LOC101213440 [Cucumis sativus]	[more]
XP_022985163.1	1.0e-53	72.22	uncharacterized protein LOC111483247 [Cucurbita maxima]	[more]
KAG7031485.1	5.2e-53	73.29	hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Clc07G05560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc07G05560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTE4	2.1e-63	80.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BTQ8	2.1e-63	80.38	uncharacterized protein LOC103493452 OS=Cucumis melo OX=3656 GN=LOC103493452 PE=...	[more]
A0A6J1JCS8	5.1e-54	72.22	uncharacterized protein LOC111483247 OS=Cucurbita maxima OX=3661 GN=LOC111483247...	[more]
A0A0A0KJ82	5.1e-54	74.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021310 PE=4 SV=1	[more]
A0A6J1FWQ3	1.6e-52	72.05	uncharacterized protein LOC111447634 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]

BLAST of Clc07G05560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01755.1	4.7e-28	58.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36729	EXPRESSED PROTEIN	coord: 47..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G05560.2	Clc07G05560.2	mRNA