Clc07G04920 (gene) Watermelon (cordophanus) v2

Overview
NameClc07G04920
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosome biogenesis protein NOP53
LocationClcChr07: 5812573 .. 5816551 (-)
RNA-Seq ExpressionClc07G04920
SyntenyClc07G04920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGACCACAAAGGATGCTCTCTCCGGCGGCTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGGTATTGCTGCTTCTATTTTTCTTTCTATTTCCCCCTCCATAACCATGCCTCTTTTGACTTCGCCGGTTTTTGTTCTTGTTCTACCTCTCTTGGGTTCTGCTTTCTTAGTTGATTTTGATGTTTTCTTTGCATTGTTTCTGTTGGGTTTTGAGGATGTTAACTAAAGTATCCACAAAAAGTCACTAGAGGTCTCTGAAATTTTGTTTGACGCTAAACGAATCAAATTCCAGCTGCAAGCCTCCTAGCTCATCCTATATTCACCCATATGTTACAAATGAATACTTATAATTGAGAATTTTGAATAGTTTCTCTTGTATTACGAGAACTTTGATTGCCCAACTGAAATTAAGCCAGATATACGTGTGTAAACAATTACATTATTTTAGAGATGTTAAATTCTGTCTCGATTTGCACTTGGGCTTTGAAAGAAGAATCTATTTCCTTTCCTCTTAATAGGAGATAAAACATGTTAGTCTTGGATCCTTTTTGTATACAATTTCTGATGATTGGATGGTATCCTTAATGAGATTTTATGATAAACATGGGCAGAGGTTAGAGTTTTGGTCGTGTGCTTTACCTTCTAATGTATTTGTTTGCTTTGACTTGGGAACTCGAGCCTAGATTAACCGTATATTTGTTTCCGTAAGAGTATAAGCTGATTTCCATAAACAGAACATTGAATTTTTAGTCTTATCGTTTGCACTAATTATTATTAGTTTCTTTGTTTTTCTTTATAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGACAGCATGTTAACGAAGAACCCATTTGTCCAAGCTGTGCCTTCTTCAGTAAGTAAGAAATCCAAGAAAAAACAGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCGAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTTTTTTTCGTTTTCTCTCATTACTCTTTTGATATGTATCTCACTTTCGTTCTTAACAACCATTTTTAGTGAAAAAAATGAAATAATCAAACATTACACTACTTGTTTTTGGTGCACTGCAGGTGAGGGTAGAAGCAAAAAAATCAGTAAGGTATGCTCTTTTACCTGGTTAATTAATAATAAGTCTTATATTTTATTGTATATTTGTTTATGTCATAAGTTAGAGGTCATTGGTCTCAAATATAGTAATATCAATTTATGAAAATATTAGACTCATGTCCTTATGTGAAAAAGGGGGAAAAGAAGAAAAGAGGATGTTGGAAATCAAGAATTATAAGAAAGAAAGGGGAAAGAAAGTTTAGATTTTGTTGCAGGAATGTAACAAAGTAATTGTTGATGCAATCTTGGACAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCAACGCATGAGAGTCATCAGGTAAGATGTAACAATTCCAAGCATTGTTTCTTGAAGAAGAAGTTAAATAATGTTGTTGGGTGATGTTTTCATAATAGATCGTTAAAAGTGTGCTTTTCCCCTTCAAACTCTTTATCATACCTGTTCTTTTACTTAATTTTCCCATTTCATGACTCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCTTTAACAGTCCCGGGAGAAGTTATTAGTGAAGAAGATGTGAGTACATTGACCCATAAACTTGAATTTTATTGGGATACTTATCCCAGTGCGTAAAATCTGGTTCTTCCTTTTAGTTTCTTTTCATGATTTGATAGATTATCTTCACTTCCTGTTTTGCAGATGTTGTTTTTGGATGCTGATAATAACACTGAAGATGAAGCGAATTTGGACAAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGTTTTGTTTATGGGATCTAAACTATTTTAAAGATTGCGATTTTTCCAAGTAGTTTGGATCAATTTTTTTGGCTCTCTTATGCATAGTTTCTCTATATTTGAGTATACACGATTCATTTACTCTGTGAATCTATCAGAAGTTAAAAGCTTATGTTCTTCATTATTATTGGGTTTGGGATTGAGCTGATCTTGCTTACATATGCATTTGGATTGTATGTCCTTGATGGTTTATCTCTCTAACTTGCGTGCTTTTGGGAGAGTGAAAATAAAATGTTTTAAGAATTCTATCCACCGACATTTTAGTATTTTAAAGAATAGGAAGGTTACTGGAGACGTTGGAATTGGGTAGCGATGAGATCATTGTGAAACCTTGGTCATTTTCTTTGCAAACAAATCTTATTCTTTTGGTAACTACAGTTTGGGAGTTTTTTTTTGCTTTTATCTACCTTTTATTCTAATTTTAATTTTATTCCCAGGGCTTTAGGTTCGGTTTGGACCTCTGGACTTTCTATATTGTTGTTGTTGTTGTGTGTTTTTCTTTTTTAAATTTAATTTTAATGCTTTTGAGCTGCGATAATAATTGTTCTTAAATGTATACTTTATGATGGTGAATTTCGAGTTGGTATTATTTGAATAAATTAAGCTTGTTACTCAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTTGAGTTGAATAAGAGATCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGGTAAATTAGTATCTTTGCTCTTCCATCGTTATAAAACATCCACAAGTTGAAAGGTGTTATAAAAAAAGAGAGAAAAATGTTCTATGTAACTGAGCTTTTGCTCTTGTGGATGTAGCTTGCCGGATATCATTCAAGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGACGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTATGTAGTATTATATTGATAACTTGGCATAATTCATGTCACTACTATTACCTTTTAAATAGTTCTTTCTATTTCTTATTTATTGTTTTTTGTTTCCTTTTTCTTCAGCAACTGTTTCTTGTTTGTTTTGGTTTTTTTTCAAAAAAAAAAAAAAACTGAAACATGTTTGATGAGCGTTTCTATCTTTTTTTAACACAATTTTATTGATTGTTCTCTTAAATTGTAACTTCAAAATGTAAAAATTTTAAAAAATTTATGTTTATATTTATTTTATGCGTTTATATGCATTTAGAGATAGAAATGATAAAGTGACACTTCTATTTATGGTTTGAAAAAAAATTGGTAACTGAGGCAAAAACATGATTTTGTTTTTTTCATAATTTCTACACAATTTTGGAAATGTTTCTAAAAAATTAAAAACAAAAAACAGGAAAAAAATGCATAATACTTCTATTTCTGTAAATCTAGAAACAGGAAACCAGAAACCATAACATTATCAAACCGGCTCTTAAGAATCAACCGACTCGTGCTAGAAGAATATTAGAACAAGATATTTGTGTTTTGAATTGTATGGTGGTGTTACTTTCAGGTTTGAGCCCGCTCCGGTTCAAGTTCTCCTATCTGAGGAGATAACTGGATCGTTTCGTAAGCTGAAGGTGCATTCATTTAATCTCCATATTCATCCTCCCTGAATAGTTTCTCTATCAAAACTGTTGTTTCTGAAATATAGATGTGAACTAATAGAACATTGTGGTTTGTTATGTTGTATAAATATATAGGGCTGTTGCACCCTTGTGAGGGACAGGTATAAGAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAGCAGAAGGTTAGTTATTAGTTCTTTTTACAGTTCACTCCATCTATGA

mRNA sequence

ATGGGGAATAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGACCACAAAGGATGCTCTCTCCGGCGGCTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGACAGCATGTTAACGAAGAACCCATTTGTCCAAGCTGTGCCTTCTTCAGTAAGTAAGAAATCCAAGAAAAAACAGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCGAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGGTAGAAGCAAAAAAATCAGTAAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCAACGCATGAGAGTCATCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCTTTAACAGTCCCGGGAGAAGTTATTAGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGAAGATGAAGCGAATTTGGACAAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTTGAGTTGAATAAGAGATCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGCTTGCCGGATATCATTCAAGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGACGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTTTGAGCCCGCTCCGGTTCAAGTTCTCCTATCTGAGGAGATAACTGGATCGTTTCGTAAGCTGAAGGGCTGTTGCACCCTTGTGAGGGACAGGTATAAGAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAGCAGAAGGTTAGTTATTAGTTCTTTTTACAGTTCACTCCATCTATGA

Coding sequence (CDS)

ATGGGGAATAGGAAGGGGAAGAAAGCATGGAGAGCAAACATAAGCACTGCTGAAATTGAGGATTTCTTCGAGAAGACCACAAAGGATGCTCTCTCCGGCGGCTCTCTTTCCGCCGTTCCCAGCGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAGCGGGAAAAAGTCCTTTACTGTGACAGCATGTTAACGAAGAACCCATTTGTCCAAGCTGTGCCTTCTTCAGTAAGTAAGAAATCCAAGAAAAAACAGGAAGAGGCTTCCTCAGTTAAAGAAATCTCTCAAGATGGTCCGAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGGTAGAAGCAAAAAAATCAGTAAGAAATCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCAACGCATGAGAGTCATCAGGATGTACTTGCCCAAGCTGTTGCACAAGAAATGCAGAAAGTATATCGTAATGAACTGGGGCCTGCACCAGTTCCTTTAACAGTCCCGGGAGAAGTTATTAGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGAAGATGAAGCGAATTTGGACAAAATGGGTCAGGATGAAGATAATGAATTAGAAAAAAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTTGAGTTGAATAAGAGATCTAGGCATAAAGAAAAGGTCAGAAAGGAAGCCGAAGCAAAGAAGTTGGAAGGAATTTCTAAAGAGATTGACAGCTTGCCGGATATCATTCAAGAAATAGCCAAAGAGGACGAGGAGAGAGAAAATAGACGTATCCGACGAACAATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTTTGAGCCCGCTCCGGTTCAAGTTCTCCTATCTGAGGAGATAACTGGATCGTTTCGTAAGCTGAAGGGCTGTTGCACCCTTGTGAGGGACAGGTATAAGAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAGCAGAAGGTTAGTTATTAGTTCTTTTTACAGTTCACTCCATCTATGA

Protein sequence

MGNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKKREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVPLTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRRLVISSFYSSLHL
Homology
BLAST of Clc07G04920 vs. NCBI nr
Match: XP_038878460.1 (ribosome biogenesis protein NOP53 [Benincasa hispida])

HSP 1 Score: 624.4 bits (1609), Expect = 6.2e-175
Identity = 328/352 (93.18%), Postives = 341/352 (96.88%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KREKVLYCDS+LTKNPFVQAVPSSV+KKSKKK EEAS VKE SQDG KVGMLDLWDD+GE
Sbjct: 67  KREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASLVKETSQDGSKVGMLDLWDDEGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKKI+KKSKPSIIPAVEVE PGCSFNP+HESHQDVLAQAVAQEMQKVYRNELGPAPVP
Sbjct: 127 VRSKKINKKSKPSIIPAVEVEHPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVI EEDMLFLD DNNT+DE NLD+M QDED+ELEKRPLKMRRVTRVELNKR+RH
Sbjct: 187 LTVPGEVIREEDMLFLDVDNNTDDETNLDEMDQDEDHELEKRPLKMRRVTRVELNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERL+SCPPRLG
Sbjct: 247 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLRSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 358

BLAST of Clc07G04920 vs. NCBI nr
Match: XP_008456910.1 (PREDICTED: uncharacterized protein At2g40430 [Cucumis melo])

HSP 1 Score: 619.0 bits (1595), Expect = 2.6e-173
Identity = 324/352 (92.05%), Postives = 342/352 (97.16%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR++VLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSV++ISQ+GPKVGMLDLWDD+GE
Sbjct: 67  KRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLDLWDDEGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SK SKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYRNELGPAPVP
Sbjct: 127 VRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+ E NLD+M QDEDNELEKRPLKMRRVTRVE+NKR+R 
Sbjct: 187 LTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKRPLKMRRVTRVEMNKRARQ 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG
Sbjct: 247 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAK+RR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKTRR 358

BLAST of Clc07G04920 vs. NCBI nr
Match: TYK25827.1 (uncharacterized protein E5676_scaffold436G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 619.0 bits (1595), Expect = 2.6e-173
Identity = 324/352 (92.05%), Postives = 342/352 (97.16%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKSRDLSVKRKIEK
Sbjct: 109 GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSVKRKIEK 168

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR++VLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSV++ISQ+GPKVGMLDLWDD+GE
Sbjct: 169 KRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLDLWDDEGE 228

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SK SKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYRNELGPAPVP
Sbjct: 229 VRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVP 288

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+ E NLD+M QDEDNELEKRPLKMRRVTRVE+NKR+R 
Sbjct: 289 LTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKRPLKMRRVTRVEMNKRARQ 348

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG
Sbjct: 349 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 408

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAK+RR
Sbjct: 409 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKTRR 460

BLAST of Clc07G04920 vs. NCBI nr
Match: XP_004146478.1 (ribosome biogenesis protein NOP53 [Cucumis sativus] >KGN50714.1 hypothetical protein Csa_005854 [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 6.4e-172
Identity = 321/352 (91.19%), Postives = 340/352 (96.59%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKS+DLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSQDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR+KVLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSVK+I Q+ PKVGMLDLW D+GE
Sbjct: 67  KRDKVLYCDSVLTKNPFVQAVPSSVNKKSKKKPKEASSVKDIFQEDPKVGMLDLWGDEGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SKKSKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYR EL PAPVP
Sbjct: 127 VRSKKTSKKSKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRKELAPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+DE NLD+M QDEDNELEKRPLKMRRVTRVELNKR+RH
Sbjct: 187 LTVPGEVISEEDMLFLDADINTDDETNLDEMDQDEDNELEKRPLKMRRVTRVELNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKK+EG+SKEIDSLPDIIQEIAKEDEER+NRRIRRTIAKQE+LKSCPPRLG
Sbjct: 247 KEKVRKEAEAKKVEGVSKEIDSLPDIIQEIAKEDEERDNRRIRRTIAKQEKLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 358

BLAST of Clc07G04920 vs. NCBI nr
Match: XP_022942752.1 (ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Ribosome biogenesis protein NOP53, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 609.4 bits (1570), Expect = 2.1e-170
Identity = 318/352 (90.34%), Postives = 339/352 (96.31%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KREKVLYCDS+LTKNPFVQAVPSSV+KKSKKK EEAS+VKE SQDG KVG+LDLWDDKGE
Sbjct: 67  KREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDLWDDKGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RS KISKK KPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVA+EMQKVYRNELGPAPVP
Sbjct: 127 ARS-KISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGE ISEEDMLFLDADNN++DE NLD+M QDE+NELEKRPLKMRRVTRVE NKR+RH
Sbjct: 187 LTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKRPLKMRRVTRVEFNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KE+ +KEAEAKKL+GISK+IDSLPDIIQEIAKEDEER+ RR+RRTIAKQERLKSCPPRLG
Sbjct: 247 KEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLV+DR+KSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKSRR 357

BLAST of Clc07G04920 vs. ExPASy Swiss-Prot
Match: O22892 (Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 PE=1 SV=2)

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-97
Identity = 222/434 (51.15%), Postives = 265/434 (61.06%), Query Frame = 0

Query: 3   NRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKK 62
           +RKGKKAWRANIS+ +IEDFFEKTT+DALSGG+LSA PS+ LF VDKS DL VKRKIEK 
Sbjct: 8   SRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPVKRKIEKH 67

Query: 63  REKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVG----MLDLW-- 122
           RE+VL  DS+L KNPFVQ VPSS  K  K K+      K   Q    VG    M DLW  
Sbjct: 68  RERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSVMADLWGD 127

Query: 123 DDKGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELG 182
           D KGE  S        PSII AVE+E PGCS+NPT ESHQD+LA+AVAQEMQKVY+ ELG
Sbjct: 128 DSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTELG 187

Query: 183 PAPVPLTVPGEVISEEDMLFLDADNNTEDEAN---------------------------- 242
           PAPVPLT+ G+ +SE++  FLD DN +E E N                            
Sbjct: 188 PAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQLKPSSNT 247

Query: 243 ----------------------------------------LDKMGQDEDNELEKRPL--- 302
                                                   +  +G+ EDN+  K  +   
Sbjct: 248 NLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDVKIEVSEA 307

Query: 303 ------KMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERE 354
                 K +RVTRVELNKR R K   +KE + K  E I  EIDSLP+I++EIAKEDE+++
Sbjct: 308 GNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQ 367

BLAST of Clc07G04920 vs. ExPASy Swiss-Prot
Match: Q9UUI4 (Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp16 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.2e-17
Identity = 88/383 (22.98%), Postives = 171/383 (44.65%), Query Frame = 0

Query: 3   NRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKK 62
           +RK K+AWR NI   +IE   E+T  + + GG++   P+D+LFV+D   D  + ++  +K
Sbjct: 16  SRKNKRAWRKNIDLEDIESGLEQTRDEEIKGGNVEHKPNDALFVIDTLGDDRIAKR-SRK 75

Query: 63  REKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEE-------------------------A 122
           + K L  D +L     ++ V S ++  S +  ++                          
Sbjct: 76  KIKPLKVDQILENKSSIEKVHSHLTNNSTESNKKGKIFSRKELNRLQALVYKNKDGLTAT 135

Query: 123 SSVKEISQDGPKVGMLDLWDDKGE-----GRSKKISK-----KSKPSIIPAVEVEPPGCS 182
           S+  E+          D+W+          R   +SK         + +P V +  PG S
Sbjct: 136 SAASELKNTKQPKESYDVWETNPTVTIPVKRPSTLSKLPESLTENNAKVPNVVIADPGMS 195

Query: 183 FNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVPLTVPGEVISEEDMLFLDADNNTEDEA 242
           +NP   +   +L    ++E++K  +  +        +  +   ++ ++   +D +     
Sbjct: 196 YNPDAAAWMKLLDTKGSEELKK-EQKRISELEEKERIQKKAFEDKGLV---SDQDVNHSI 255

Query: 243 NLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDI 302
           + D   + E  E      K +R TR + NK  + +E+  +  E KK E + + ID  P I
Sbjct: 256 DSDDQSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDKAPAI 315

Query: 303 IQEIAKED--EERENRRIRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSFRKL 349
            +++ ++D  E+  N+ +  +  +   +K    + GKH+    P+++ L +E+T S R+L
Sbjct: 316 SKKLQQKDKAEKFSNKAVSSSTTE---IKLKKKKFGKHRLPNNPLEIKLGDELTSSLREL 375

BLAST of Clc07G04920 vs. ExPASy Swiss-Prot
Match: Q9NEU5 (Ribosome biogenesis protein NOP53 OS=Caenorhabditis elegans OX=6239 GN=Y39B6A.33 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15
Identity = 111/400 (27.75%), Postives = 188/400 (47.00%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLS--VKRKI 61
           G+R  KK WR   +  +IED     ++ A +GG +S +  + LF+VD++   +  V  K+
Sbjct: 12  GSRHNKKYWRKGTNIDDIEDSIHIKSRQAATGGVISEMKDEDLFIVDRTATANKPVVPKL 71

Query: 62  EKKREKVLYCDSMLTKNPFVQAV----PSSVSKKSKK--KQEEASSVKEISQDGPKVGM- 121
            KK++  L     +TKN   + V    PS+ SK  KK  K    +++  + + GPK    
Sbjct: 72  TKKQQAAL---EKITKNITQEHVTLPKPSTTSKILKKPAKLPRGNAILALKK-GPKAAAP 131

Query: 122 ------LDLW--------------DDKGEGRSKKISKKSKP--------SIIPAVEVEPP 181
                  D+W              + +      K+ KK +P        S++PAV++   
Sbjct: 132 AAKKKNFDVWTTDLTPKIPKSKLENQEAAEHFLKVVKKKQPKTPGKSITSLLPAVQIAEG 191

Query: 182 GCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVPLTVPGEVISEEDMLFLD------ 241
           G S+NP    +Q+ +A+ +A E QK+  +E       +    E ++ E   FL+      
Sbjct: 192 GASYNPESAEYQEYVAK-IAGEEQKLIDHE-AKIKAGIEPQWEKVTTEHERFLEMAEGLR 251

Query: 242 ------ADNNTEDEANLDKMGQDEDNELEKRPLKMR--RVTRVELNKRSRHKEKVRKEAE 301
                  D+  E+EA   +       E E +  ++   R+T+ E  K+    +K+ KE E
Sbjct: 252 IHPKYGKDDEEEEEAGNSEKSMKTGGEAEPKSQRVECDRMTK-EQKKKKAKAQKLDKE-E 311

Query: 302 AKKLEGISKEIDSLPDI-IQEIAKE-DEERENRRIRRTIAKQERL---KSCPPRLGKHKF 346
            ++LE  +KE DS      +++ KE DEE + R     + K+E+L    +   +LGK KF
Sbjct: 312 KRRLEEKAKEQDSHNVYRTKQLHKELDEEEKQRHEESEVRKKEKLINKLTKRQQLGKGKF 371

BLAST of Clc07G04920 vs. ExPASy Swiss-Prot
Match: Q9NZM5 (Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15
Identity = 114/421 (27.08%), Postives = 177/421 (42.04%), Query Frame = 0

Query: 2   GNRKGKKAWRANIST---AEIEDFFEKT-TKDALSGGSLSAVPSDSLFVVD---KSRDLS 61
           G R  K+ WR         E++ F E    ++  SGG LS  P++ LF VD   K + L+
Sbjct: 40  GPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKEKGLT 99

Query: 62  VKR-KIEKKR---EKVLYCDSMLTKNPFVQAVPSSV-------SKKSKKKQE-------- 121
            KR K++KK    +K L  D +L     V A P  V       +KK ++K++        
Sbjct: 100 KKRTKVQKKSLLLKKPLRVDLILENTSKVPA-PKDVLAHQVPNAKKLRRKEQLWEKLAKQ 159

Query: 122 -----------------EASSVKEISQDGPKVGMLDLW-------------------DDK 181
                             A+  K   QD  +    DLW                     K
Sbjct: 160 GELPREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLEQTK 219

Query: 182 GEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAP 241
            +G  +     +KPS  PAVEV P G S+NP+ E HQ +L+ A   E+Q+    E     
Sbjct: 220 KKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKLERQ 279

Query: 242 VPLTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNE---LEKRPLKMRRVTRVELN 301
           + L    +  ++E       +   E+     + GQ E  E    E  P   R  T  +  
Sbjct: 280 LALPATEQAATQESTFQELCEGLLEESDGEGEPGQGEGPEAGDAEVCPTPARLATTEKKT 339

Query: 302 KRSRHKEKV-----RKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQE 353
           ++ R +EK       ++A  +      +E+  L  I  ++A    E   RR RR  A++E
Sbjct: 340 EQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKAQVALRLAELA-RRQRRRQARRE 399

BLAST of Clc07G04920 vs. ExPASy Swiss-Prot
Match: Q8BK35 (Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.7e-14
Identity = 115/433 (26.56%), Postives = 190/433 (43.88%), Query Frame = 0

Query: 2   GNRKGKKAWRANIST---AEIEDFFEKT-TKDALSGGSLSAVPSDSLFVVD---KSRDLS 61
           G R  K+ WR         E++ F E    ++  +GG L+  P++ LF VD   K ++  
Sbjct: 40  GPRNKKRGWRRLAEEPLGLEVDQFLEDVRLQERTTGGLLAEAPNEKLFFVDTGFKRKEPR 99

Query: 62  VKRKIEKKR----EKVLYCDSMLTKNPFVQA--------VPSSVSKKSKKKQE------- 121
            KR + +K+    +K L  D  L  +  + A        VP+  +KK ++K+E       
Sbjct: 100 KKRTLVQKKSQRLQKPLRVDLALENHSKIPAPKDILAHQVPN--AKKLRRKEELWEKLAK 159

Query: 122 --------EASSVKEISQDGPKV----------GMLDLWD-------------------D 181
                     +  + +S   PK              DLW+                    
Sbjct: 160 QGELPRDVRKAQARLLSPPTPKAKPGPQDIIERPFYDLWNPDNPLDTPLIGQDAFFLEQT 219

Query: 182 KGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPA 241
           K +G  +      KPS +PAVEV P G S+NPT E HQ +L +A   E+Q+    E    
Sbjct: 220 KKKGVRRPQRLHIKPSQVPAVEVIPAGASYNPTFEDHQALLREAHEVELQREKEAEKLER 279

Query: 242 PVPLTVPGEVISEEDML-----FLDADNNTEDEANLDKMGQDE--DNELEKRPL------ 301
            + L    +  ++E +       L  +++ EDE    + GQ E  D   E  P       
Sbjct: 280 QLALPTSEQAATQESVFREMCEGLLEESDGEDEHEAGRAGQPEAGDGTTEISPTGAAGPE 339

Query: 302 -KMRRVTRVELNKRSRHKEKVRKEAEAKKLEGIS-KEIDSLPDIIQEIAKEDEE----RE 353
            +M + T  +  +R +   K+R +  A +   +  +E+  L  I  ++A+   E    RE
Sbjct: 340 KRMEKKTE-QQRRREKAARKLRVQQAALRAARLQHQELFRLRGIKAQVARRLAELARRRE 399

BLAST of Clc07G04920 vs. ExPASy TrEMBL
Match: A0A5D3DQ80 (Ribosome biogenesis protein NOP53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00340 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.3e-173
Identity = 324/352 (92.05%), Postives = 342/352 (97.16%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKSRDLSVKRKIEK
Sbjct: 109 GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSVKRKIEK 168

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR++VLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSV++ISQ+GPKVGMLDLWDD+GE
Sbjct: 169 KRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLDLWDDEGE 228

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SK SKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYRNELGPAPVP
Sbjct: 229 VRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVP 288

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+ E NLD+M QDEDNELEKRPLKMRRVTRVE+NKR+R 
Sbjct: 289 LTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKRPLKMRRVTRVEMNKRARQ 348

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG
Sbjct: 349 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 408

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAK+RR
Sbjct: 409 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKTRR 460

BLAST of Clc07G04920 vs. ExPASy TrEMBL
Match: A0A1S3C5J4 (Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.3e-173
Identity = 324/352 (92.05%), Postives = 342/352 (97.16%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR++VLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSV++ISQ+GPKVGMLDLWDD+GE
Sbjct: 67  KRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLDLWDDEGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SK SKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYRNELGPAPVP
Sbjct: 127 VRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+ E NLD+M QDEDNELEKRPLKMRRVTRVE+NKR+R 
Sbjct: 187 LTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKRPLKMRRVTRVEMNKRARQ 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG
Sbjct: 247 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAK+RR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKTRR 358

BLAST of Clc07G04920 vs. ExPASy TrEMBL
Match: A0A0A0KP89 (Ribosome biogenesis protein NOP53 OS=Cucumis sativus OX=3659 GN=Csa_5G218800 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 3.1e-172
Identity = 321/352 (91.19%), Postives = 340/352 (96.59%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSA+PSDSLFVVDKS+DLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSQDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KR+KVLYCDS+LTKNPFVQAVPSSV+KKSKKK +EASSVK+I Q+ PKVGMLDLW D+GE
Sbjct: 67  KRDKVLYCDSVLTKNPFVQAVPSSVNKKSKKKPKEASSVKDIFQEDPKVGMLDLWGDEGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RSKK SKKSKPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVAQEMQKVYR EL PAPVP
Sbjct: 127 VRSKKTSKKSKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRKELAPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGEVISEEDMLFLDAD NT+DE NLD+M QDEDNELEKRPLKMRRVTRVELNKR+RH
Sbjct: 187 LTVPGEVISEEDMLFLDADINTDDETNLDEMDQDEDNELEKRPLKMRRVTRVELNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KEKVRKEAEAKK+EG+SKEIDSLPDIIQEIAKEDEER+NRRIRRTIAKQE+LKSCPPRLG
Sbjct: 247 KEKVRKEAEAKKVEGVSKEIDSLPDIIQEIAKEDEERDNRRIRRTIAKQEKLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 358

BLAST of Clc07G04920 vs. ExPASy TrEMBL
Match: A0A6J1FR54 (Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.0e-170
Identity = 318/352 (90.34%), Postives = 339/352 (96.31%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KREKVLYCDS+LTKNPFVQAVPSSV+KKSKKK EEAS+VKE SQDG KVG+LDLWDDKGE
Sbjct: 67  KREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDLWDDKGE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RS KISKK KPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVA+EMQKVYRNELGPAPVP
Sbjct: 127 ARS-KISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGE ISEEDMLFLDADNN++DE NLD+M QDE+NELEKRPLKMRRVTRVE NKR+RH
Sbjct: 187 LTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKRPLKMRRVTRVEFNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KE+ +KEAEAKKL+GISK+IDSLPDIIQEIAKEDEER+ RR+RRTIAKQERLKSCPPRLG
Sbjct: 247 KEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLV+DR+KSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKSRR 357

BLAST of Clc07G04920 vs. ExPASy TrEMBL
Match: A0A6J1JS50 (Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 318/352 (90.34%), Postives = 338/352 (96.02%), Query Frame = 0

Query: 2   GNRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 61
           G+RKGKKAWRANISTAEIEDFFEK+TKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK
Sbjct: 7   GSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEK 66

Query: 62  KREKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVGMLDLWDDKGE 121
           KREKVLYCDS+LTKNPFVQAVPSSV+KKSKKK EEAS+VKE SQDG KVG+LDLWDDK E
Sbjct: 67  KREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDLWDDKDE 126

Query: 122 GRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELGPAPVP 181
            RS KISKK KPSIIPAVEVEPPGCSFNP+HESHQDVLAQAVA+EMQKVYRNELGPAPVP
Sbjct: 127 ARS-KISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP 186

Query: 182 LTVPGEVISEEDMLFLDADNNTEDEANLDKMGQDEDNELEKRPLKMRRVTRVELNKRSRH 241
           LTVPGE ISEEDMLFLDADNNT+DE NLD+M QDE+NELEKRPLKMRRVTRVE NKR+RH
Sbjct: 187 LTVPGEAISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRPLKMRRVTRVEFNKRARH 246

Query: 242 KEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKSCPPRLG 301
           KE+ +KEAEAKKL+GISK+IDSLPDIIQEIAKEDEER+ RR+RRTIAKQERLKSCPPRLG
Sbjct: 247 KEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKSCPPRLG 306

Query: 302 KHKFEPAPVQVLLSEEITGSFRKLKGCCTLVRDRYKSLEKRGIIAPTAKSRR 354
           KHKFEPAPVQVLLSEEITGS RKLKGCCTLV+DR+KSLEKRGIIAPTAKSRR
Sbjct: 307 KHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKSRR 357

BLAST of Clc07G04920 vs. TAIR 10
Match: AT2G40430.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink). )

HSP 1 Score: 360.5 bits (924), Expect = 1.6e-99
Identity = 224/436 (51.38%), Postives = 267/436 (61.24%), Query Frame = 0

Query: 3   NRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKK 62
           +RKGKKAWRANIS+ +IEDFFEKTT+DALSGG+LSA PS+ LF VDKS DL VKRKIEK 
Sbjct: 8   SRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPVKRKIEKH 67

Query: 63  REKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVG----MLDLW-- 122
           RE+VL  DS+L KNPFVQ VPSS  K  K K+      K   Q    VG    M DLW  
Sbjct: 68  RERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSVMADLWGD 127

Query: 123 DDKGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELG 182
           D KGE  S        PSII AVE+E PGCS+NPT ESHQD+LA+AVAQEMQKVY+ ELG
Sbjct: 128 DSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTELG 187

Query: 183 PAPVPLTVPGEVISEEDMLFLDADNNTEDEAN---------------------------- 242
           PAPVPLT+ G+ +SE++  FLD DN +E E N                            
Sbjct: 188 PAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQLKPSSNT 247

Query: 243 ----------------------------------------LDKMGQDEDNELEKRPL--- 302
                                                   +  +G+ EDN+  K  +   
Sbjct: 248 NLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDVKIEVSEA 307

Query: 303 ------KMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERE 356
                 K +RVTRVELNKR R K   +KE + K  E I  EIDSLP+I++EIAKEDE+++
Sbjct: 308 GNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQ 367

BLAST of Clc07G04920 vs. TAIR 10
Match: AT2G40430.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). )

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-98
Identity = 222/433 (51.27%), Postives = 265/433 (61.20%), Query Frame = 0

Query: 3   NRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKK 62
           +RKGKKAWRANIS+ +IEDFFEKTT+DALSGG+LSA PS+ LF VDKS DL VKRKIEK 
Sbjct: 8   SRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPVKRKIEKH 67

Query: 63  REKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVG----MLDLW-- 122
           RE+VL  DS+L KNPFVQ VPSS  K  K K+      K   Q    VG    M DLW  
Sbjct: 68  RERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSVMADLWGD 127

Query: 123 DDKGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELG 182
           D KGE  S        PSII AVE+E PGCS+NPT ESHQD+LA+AVAQEMQKVY+ ELG
Sbjct: 128 DSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTELG 187

Query: 183 PAPVPLTVPGEVISEEDMLFLDADNNTEDEAN---------------------------- 242
           PAPVPLT+ G+ +SE++  FLD DN +E E N                            
Sbjct: 188 PAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQLKPSSNT 247

Query: 243 ---------------------------------------LDKMGQDEDNELEKRPL---- 302
                                                  +  +G+ EDN+  K  +    
Sbjct: 248 NLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKDLKYFLEVGNVGEGEDNKDVKIEVSEAG 307

Query: 303 -----KMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEEREN 354
                K +RVTRVELNKR R K   +KE + K  E I  EIDSLP+I++EIAKEDE+++N
Sbjct: 308 NNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQN 367

BLAST of Clc07G04920 vs. TAIR 10
Match: AT2G40430.1 (CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). )

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-98
Identity = 222/434 (51.15%), Postives = 265/434 (61.06%), Query Frame = 0

Query: 3   NRKGKKAWRANISTAEIEDFFEKTTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKK 62
           +RKGKKAWRANIS+ +IEDFFEKTT+DALSGG+LSA PS+ LF VDKS DL VKRKIEK 
Sbjct: 8   SRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPVKRKIEKH 67

Query: 63  REKVLYCDSMLTKNPFVQAVPSSVSKKSKKKQEEASSVKEISQDGPKVG----MLDLW-- 122
           RE+VL  DS+L KNPFVQ VPSS  K  K K+      K   Q    VG    M DLW  
Sbjct: 68  RERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSVMADLWGD 127

Query: 123 DDKGEGRSKKISKKSKPSIIPAVEVEPPGCSFNPTHESHQDVLAQAVAQEMQKVYRNELG 182
           D KGE  S        PSII AVE+E PGCS+NPT ESHQD+LA+AVAQEMQKVY+ ELG
Sbjct: 128 DSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQKVYKTELG 187

Query: 183 PAPVPLTVPGEVISEEDMLFLDADNNTEDEAN---------------------------- 242
           PAPVPLT+ G+ +SE++  FLD DN +E E N                            
Sbjct: 188 PAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQLKPSSNT 247

Query: 243 ----------------------------------------LDKMGQDEDNELEKRPL--- 302
                                                   +  +G+ EDN+  K  +   
Sbjct: 248 NLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDVKIEVSEA 307

Query: 303 ------KMRRVTRVELNKRSRHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERE 354
                 K +RVTRVELNKR R K   +KE + K  E I  EIDSLP+I++EIAKEDE+++
Sbjct: 308 GNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQ 367

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878460.16.2e-17593.18ribosome biogenesis protein NOP53 [Benincasa hispida][more]
XP_008456910.12.6e-17392.05PREDICTED: uncharacterized protein At2g40430 [Cucumis melo][more]
TYK25827.12.6e-17392.05uncharacterized protein E5676_scaffold436G00340 [Cucumis melo var. makuwa][more]
XP_004146478.16.4e-17291.19ribosome biogenesis protein NOP53 [Cucumis sativus] >KGN50714.1 hypothetical pro... [more]
XP_022942752.12.1e-17090.34ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Riboso... [more]
Match NameE-valueIdentityDescription
O228921.9e-9751.15Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 P... [more]
Q9UUI47.2e-1722.98Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
Q9NEU54.0e-1527.75Ribosome biogenesis protein NOP53 OS=Caenorhabditis elegans OX=6239 GN=Y39B6A.33... [more]
Q9NZM54.0e-1527.08Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2[more]
Q8BK355.7e-1426.56Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3DQ801.3e-17392.05Ribosome biogenesis protein NOP53 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C5J41.3e-17392.05Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 S... [more]
A0A0A0KP893.1e-17291.19Ribosome biogenesis protein NOP53 OS=Cucumis sativus OX=3659 GN=Csa_5G218800 PE=... [more]
A0A6J1FR541.0e-17090.34Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 ... [more]
A0A6J1JS502.2e-17090.34Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE... [more]
Match NameE-valueIdentityDescription
AT2G40430.21.6e-9951.38FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G40430.31.0e-9851.27FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G40430.11.3e-9851.15CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor pro... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..252
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PIRSFPIRSF017302Gltscr2coord: 1..112
e-value: 9.8E-13
score: 45.7
coord: 75..357
e-value: 5.3E-34
score: 115.8
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PFAMPF07767Nop53coord: 4..339
e-value: 4.4E-58
score: 197.5
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PANTHERPTHR14211GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2coord: 2..351

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc07G04920.2Clc07G04920.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0006364 rRNA processing
cellular_component GO:0005730 nucleolus
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0008097 5S rRNA binding