Clc07G03520 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03520
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	LOB domain-containing protein
Location	ClcChr07: 3520980 .. 3522091 (+)
RNA-Seq Expression	Clc07G03520
Synteny	Clc07G03520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATAGTTGTTCCTTTTTTCCTTGTACTTCAAACTTAAAAAGTCATCATATAATTGAGACAATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTACGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCGCTCGAGCGCATGCGAGATCCTACCTATGGTTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGTTTTGAAACCCTAAAAACTTAAGCAGATGGATTACAGTTAATTTACGTGTGACCTTACCTTTTTATTCCTATGAGAGTATGACAAAACTCTAAAAATTTAAGCAGATGATTACATTTTATTCATATTTTTAACCCTTCAATAATTCACTTGAGAAATACTCAACAATAATAGAGATTTGAATAACCACGATACTTTATATTTCAATCTTATTGCAAACGGACACTATTAAATTCAAAAGCTTAAGTTAAGTTATTAAATCTTCCTCGTGTAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGGGGTTGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAACATCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATGTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGATGAAGAGAGAAGAAGAAAAATTGAAAGTTTTGTGTAGTTGGCCTTTGGCCTAAATGGAAGAATAATATTGGTCTTTATGTTGAAAATAATTATATATATTAGATTTTTTATA

mRNA sequence

CCATAGTTGTTCCTTTTTTCCTTGTACTTCAAACTTAAAAAGTCATCATATAATTGAGACAATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTACGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCGCTCGAGCGCATGCGAGATCCTACCTATGGTTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGGGGTTGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAACATCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATGTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGATGAAGAGAGAAGAAGAAAAATTGAAAGTTTTGTGTAGTTGGCCTTTGGCCTAAATGGAAGAATAATATTGGTCTTTATGTTGAAAATAATTATATATATTAGATTTTTTATA

Coding sequence (CDS)

ATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTACGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCGCTCGAGCGCATGCGAGATCCTACCTATGGTTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGGGGTTGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAACATCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATGTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGA

Protein sequence

MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPWVVG

Homology

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BLAST of Clc07G03520 vs. NCBI nr
Match: XP_038889414.1 (LOB domain-containing protein 33-like [Benincasa hispida])

HSP 1 Score: 394.0 bits (1011), Expect = 8.2e-106
Identity = 197/223 (88.34%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 1   MTGLN---SSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSK 60
           MTGLN   SS+ SSSSCGACKFLRRKCSDQCVFAPFFSY+EATSHFAAVHKVFGASNVSK
Sbjct: 1   MTGLNSSISSSSSSSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSK 60

Query: 61  LLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF 120
           LLLHLP+HIRSHAA+TVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF
Sbjct: 61  LLLHLPVHIRSHAAVTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF 120

Query: 121 TATGGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMI 180
            A GGS+A VENP IDQLQVSQQL DFG+MN +DYQNELLSELPYQSFDN+QND NGQMI
Sbjct: 121 AAAGGSIAAVENPLIDQLQVSQQLNDFGVMNTNDYQNELLSELPYQSFDNVQND-NGQMI 180

Query: 181 SPLFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPWVVG 221
           SPLFCLGEEDGV GFC+SN+VVERSA DVS EE+F+GYPWVVG
Sbjct: 181 SPLFCLGEEDGVLGFCNSNNVVERSAFDVSVEENFIGYPWVVG 222

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BLAST of Clc07G03520 vs. NCBI nr
Match: XP_004147712.1 (LOB domain-containing protein 33 [Cucumis sativus] >KGN50569.1 hypothetical protein Csa_021431 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-100
Identity = 188/221 (85.07%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLNSSN SS+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLNSSN-SSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTAT 120
           HLP HIRSHAA+TVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF  T
Sbjct: 61  HLPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATT 120

Query: 121 GGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDN-NGQMISP 180
           GGS+A V+NPFIDQ+QV QQ+  FGMMN + YQNEL+SELPYQSFDN+QNDN   QMISP
Sbjct: 121 GGSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISP 180

Query: 181 LFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPWVVG 221
           LFCLGEEDGVF F +SN+VVE SA DVS EE+ +GYPW+VG
Sbjct: 181 LFCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

[Close]

BLAST of Clc07G03520 vs. NCBI nr
Match: XP_008461694.1 (PREDICTED: LOB domain-containing protein 33-like [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 186/222 (83.78%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLNSS  +SSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLNSST-TSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTAT 120
           HLP H RSHAA+TVAYEALERMRDPTYGC+AHIFALQQEV SLQEEIEILGSQIAN   T
Sbjct: 61  HLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATT 120

Query: 121 GGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMISP 180
           GGS+A VENPFIDQ +QVSQQ+  F M N + YQNEL SELPYQSFDNIQNDN  QMISP
Sbjct: 121 GGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQNDNTAQMISP 180

Query: 181 LFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFVGYPWVVG 221
           LFCLGEEDGVF FC+SN+VVE  SA DVS EE+ VGYPW+VG
Sbjct: 181 LFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCVGYPWIVG 221

[Close]

BLAST of Clc07G03520 vs. NCBI nr
Match: KAA0050349.1 (LOB domain-containing protein 33-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 154/187 (82.35%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 36  YDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFA 95
           YDEATSHFAAVHKVFGASNVSKLLLHLP H RSHAA+TVAYEALERMRDPTYGC+AHIFA
Sbjct: 67  YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 126

Query: 96  LQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQN 155
           LQQEV SLQEEIEILGSQIAN   TGGS+A VENPFIDQ +QVSQQ+  F M N + YQN
Sbjct: 127 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 186

Query: 156 ELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFV 215
           EL SELPYQSFDNIQNDN  QMISPLFCLGEEDGVF FC+SN+VVE  SA DVS EE+ V
Sbjct: 187 ELASELPYQSFDNIQNDNTAQMISPLFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCV 246

Query: 216 GYPWVVG 221
           GYPW+VG
Sbjct: 247 GYPWIVG 253

[Close]

BLAST of Clc07G03520 vs. NCBI nr
Match: TYK03563.1 (LOB domain-containing protein 33-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 154/187 (82.35%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 36  YDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFA 95
           YDEATSHFAAVHKVFGASNVSKLLLHLP H RSHAA+TVAYEALERMRDPTYGC+AHIFA
Sbjct: 160 YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 219

Query: 96  LQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQN 155
           LQQEV SLQEEIEILGSQIAN   TGGS+A VENPFIDQ +QVSQQ+  F M N + YQN
Sbjct: 220 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 279

Query: 156 ELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFV 215
           EL SELPYQSFDNIQNDN  QMISPLFCLGEEDGVF FC+SN+VVE  SA DVS EE+ V
Sbjct: 280 ELASELPYQSFDNIQNDNTAQMISPLFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCV 339

Query: 216 GYPWVVG 221
           GYPW+VG
Sbjct: 340 GYPWIVG 346

[Close]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot
Match: Q9LHS8 (LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 88/146 (60.27%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 12  SSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAA 71
           SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R+ AA
Sbjct: 6   SSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQRNIAA 65

Query: 72  LTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAGVEN-- 131
           +T++YEAL RMRDP YGCVAHIFAL Q+V +LQEEIE LGSQ+ NF+ +  + + + N  
Sbjct: 66  ITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQLNNIP 125

Query: 132 PFIDQL-QVSQQLKDFGMMNRDDYQN 155
            F++Q+   +    D  ++N  D +N
Sbjct: 126 EFVNQMTMATTNFVDESVLNNADGRN 151

[Close]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.3e-36
Identity = 76/126 (60.32%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 5   NSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPI 64
           +SS+ S S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLPI
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 65  HIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSV 124
             R  AA+T++YEA  R++DP YGCV+HIFALQQ+V +LQ E+EIL  Q A       S 
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSP 122

Query: 125 AGVENP 131
              ENP
Sbjct: 123 TS-ENP 127

[Close]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 6.7e-34
Identity = 68/114 (59.65%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 3   GLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHL 62
           G +S       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 63  PIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIAN 117
           P+H RS A +T+ YEA  R+RDP YGCVAHIFALQQ+V +LQ E+  L + +A+
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33
Identity = 67/114 (58.77%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   TGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 61
           +G  ++  + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 62  LPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIA 116
           +PIH R  A +T+AYEA  R+ DP YGCV+HIFALQQ+VA LQ ++  + +QIA
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.6e-33
Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 12  SSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAA 71
           S CGACKFLRRKC   CVFAP+F +++  +HFAA+HKVFGASNVSKLL HLP+  R  AA
Sbjct: 6   SPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAA 65

Query: 72  LTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGS--------QIANFTATGGS 131
           +T++YEA  R+RDP YGCVAHIFALQQ+V +LQ ++  L +        Q    T  GG 
Sbjct: 66  VTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGATTKGGY 125

Query: 132 VAGVENPFIDQL 136
           ++       DQL
Sbjct: 126 MSAAATAADDQL 137

[Close]

BLAST of Clc07G03520 vs. ExPASy TrEMBL
Match: A0A0A0KNX8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100
Identity = 188/221 (85.07%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLNSSN SS+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLNSSN-SSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTAT 120
           HLP HIRSHAA+TVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANF  T
Sbjct: 61  HLPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATT 120

Query: 121 GGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDN-NGQMISP 180
           GGS+A V+NPFIDQ+QV QQ+  FGMMN + YQNEL+SELPYQSFDN+QNDN   QMISP
Sbjct: 121 GGSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISP 180

Query: 181 LFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPWVVG 221
           LFCLGEEDGVF F +SN+VVE SA DVS EE+ +GYPW+VG
Sbjct: 181 LFCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

[Close]

BLAST of Clc07G03520 vs. ExPASy TrEMBL
Match: A0A1S3CGM1 (LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.8e-97
Identity = 186/222 (83.78%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           MTGLNSS  +SSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL
Sbjct: 1   MTGLNSST-TSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60

Query: 61  HLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTAT 120
           HLP H RSHAA+TVAYEALERMRDPTYGC+AHIFALQQEV SLQEEIEILGSQIAN   T
Sbjct: 61  HLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATT 120

Query: 121 GGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMISP 180
           GGS+A VENPFIDQ +QVSQQ+  F M N + YQNEL SELPYQSFDNIQNDN  QMISP
Sbjct: 121 GGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQNDNTAQMISP 180

Query: 181 LFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFVGYPWVVG 221
           LFCLGEEDGVF FC+SN+VVE  SA DVS EE+ VGYPW+VG
Sbjct: 181 LFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCVGYPWIVG 221

[Close]

BLAST of Clc07G03520 vs. ExPASy TrEMBL
Match: A0A5A7UA24 (LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00800 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.4e-79
Identity = 154/187 (82.35%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 36  YDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFA 95
           YDEATSHFAAVHKVFGASNVSKLLLHLP H RSHAA+TVAYEALERMRDPTYGC+AHIFA
Sbjct: 67  YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 126

Query: 96  LQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQN 155
           LQQEV SLQEEIEILGSQIAN   TGGS+A VENPFIDQ +QVSQQ+  F M N + YQN
Sbjct: 127 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 186

Query: 156 ELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFV 215
           EL SELPYQSFDNIQNDN  QMISPLFCLGEEDGVF FC+SN+VVE  SA DVS EE+ V
Sbjct: 187 ELASELPYQSFDNIQNDNTAQMISPLFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCV 246

Query: 216 GYPWVVG 221
           GYPW+VG
Sbjct: 247 GYPWIVG 253

[Close]

BLAST of Clc07G03520 vs. ExPASy TrEMBL
Match: A0A5D3BV37 (LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00610 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.4e-79
Identity = 154/187 (82.35%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 36  YDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFA 95
           YDEATSHFAAVHKVFGASNVSKLLLHLP H RSHAA+TVAYEALERMRDPTYGC+AHIFA
Sbjct: 160 YDEATSHFAAVHKVFGASNVSKLLLHLPTHTRSHAAITVAYEALERMRDPTYGCIAHIFA 219

Query: 96  LQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQ-LQVSQQLKDFGMMNRDDYQN 155
           LQQEV SLQEEIEILGSQIAN   TGGS+A VENPFIDQ +QVSQQ+  F M N + YQN
Sbjct: 220 LQQEVVSLQEEIEILGSQIANLATTGGSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQN 279

Query: 156 ELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVE-RSACDVSFEESFV 215
           EL SELPYQSFDNIQNDN  QMISPLFCLGEEDGVF FC+SN+VVE  SA DVS EE+ V
Sbjct: 280 ELASELPYQSFDNIQNDNTAQMISPLFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCV 339

Query: 216 GYPWVVG 221
           GYPW+VG
Sbjct: 340 GYPWIVG 346

[Close]

BLAST of Clc07G03520 vs. ExPASy TrEMBL
Match: A0A6J1FLU4 (LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446983 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.1e-79
Identity = 163/219 (74.43%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MTGLN--SSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKL 60
           MTGL   SS+ SSSSCGACKFLRRKCS+ CVFAPFF+YDEATSHFAAVHKVFGASNVSKL
Sbjct: 1   MTGLTSYSSSSSSSSCGACKFLRRKCSNHCVFAPFFTYDEATSHFAAVHKVFGASNVSKL 60

Query: 61  LLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFT 120
           LLHLP+HIRSHAA+TVAYEALERMRDPTYGCVAHIFALQQE+ SLQEEI++LGSQIANFT
Sbjct: 61  LLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEIMSLQEEIDMLGSQIANFT 120

Query: 121 ATGGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMIS 180
           A   +VA VENP I +LQVS+QL D  +MN +DYQNELLS+LP  +FD ++  N+ QMIS
Sbjct: 121 ADMDNVAVVENPCI-ELQVSKQLNDL-VMNTNDYQNELLSQLP--NFDQVE-INDAQMIS 180

Query: 181 PLFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPW 218
           PLFC+GEEDG FG C+ N+ +E SA DV+ +E+F GY W
Sbjct: 181 PLFCIGEEDGFFG-CNPNNAMENSAFDVAVDETF-GYLW 212

[Close]

BLAST of Clc07G03520 vs. TAIR 10
Match: AT5G06080.1 (LOB domain-containing protein 33 )

HSP 1 Score: 174.5 bits (441), Expect = 9.5e-44
Identity = 88/146 (60.27%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 12  SSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAA 71
           SSCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R+ AA
Sbjct: 6   SSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQRNIAA 65

Query: 72  LTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAGVEN-- 131
           +T++YEAL RMRDP YGCVAHIFAL Q+V +LQEEIE LGSQ+ NF+ +  + + + N  
Sbjct: 66  ITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQLNNIP 125

Query: 132 PFIDQL-QVSQQLKDFGMMNRDDYQN 155
            F++Q+   +    D  ++N  D +N
Sbjct: 126 EFVNQMTMATTNFVDESVLNNADGRN 151

[Close]

BLAST of Clc07G03520 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-37
Identity = 76/126 (60.32%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 5   NSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPI 64
           +SS+ S S CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLPI
Sbjct: 3   SSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPI 62

Query: 65  HIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSV 124
             R  AA+T++YEA  R++DP YGCV+HIFALQQ+V +LQ E+EIL  Q A       S 
Sbjct: 63  SDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSP 122

Query: 125 AGVENP 131
              ENP
Sbjct: 123 TS-ENP 127

[Close]

BLAST of Clc07G03520 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 68/114 (59.65%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 3   GLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHL 62
           G +S       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 63  PIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIAN 117
           P+H RS A +T+ YEA  R+RDP YGCVAHIFALQQ+V +LQ E+  L + +A+
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

[Close]

BLAST of Clc07G03520 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 67/114 (58.77%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 2   TGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 61
           +G  ++  + S CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 62  LPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIA 116
           +PIH R  A +T+AYEA  R+ DP YGCV+HIFALQQ+VA LQ ++  + +QIA
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]

BLAST of Clc07G03520 vs. TAIR 10
Match: AT3G03760.1 (LOB domain-containing protein 20 )

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 0


Query: 1   MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLL 60
           M    +   ++S CGACKFLRRKC   C+FAP F  D+  + FAAVHKVFGASNVSKLL 
Sbjct: 39  MAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLH 98

Query: 61  HLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTAT 120
           H+P++ R  A +T++YEA  R+ DP YGCV+ I ALQQ+VASLQ E+ ++ SQ+ N    
Sbjct: 99  HIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQLIN---- 158

Query: 121 GGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQN 155
             S   + N    Q    QQ +   +M + +Y N
Sbjct: 159 --SRVAMANVMQQQTHHQQQQQQLVVMQQPEYSN 186

The following BLAST results are available for this feature:

BLAST of Clc07G03520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889414.1	8.2e-106	88.34	LOB domain-containing protein 33-like [Benincasa hispida]	[more]
XP_004147712.1	3.9e-100	85.07	LOB domain-containing protein 33 [Cucumis sativus] >KGN50569.1 hypothetical prot...	[more]
XP_008461694.1	1.2e-96	83.78	PREDICTED: LOB domain-containing protein 33-like [Cucumis melo]	[more]
KAA0050349.1	1.1e-78	82.35	LOB domain-containing protein 33-like [Cucumis melo var. makuwa]	[more]
TYK03563.1	1.1e-78	82.35	LOB domain-containing protein 33-like [Cucumis melo var. makuwa]	[more]

BLAST of Clc07G03520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS8	1.3e-42	60.27	LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 S...	[more]
Q9M2J7	9.3e-36	60.32	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
O22131	6.7e-34	59.65	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9SLB7	4.3e-33	58.77	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
Q5UG13	9.6e-33	54.55	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of Clc07G03520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNX8	1.9e-100	85.07	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV...	[more]
A0A1S3CGM1	5.8e-97	83.78	LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE...	[more]
A0A5A7UA24	5.4e-79	82.35	LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3BV37	5.4e-79	82.35	LOB domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1FLU4	7.1e-79	74.43	LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446...	[more]

BLAST of Clc07G03520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06080.1	9.5e-44	60.27	LOB domain-containing protein 33	[more]
AT3G58190.1	6.6e-37	60.32	lateral organ boundaries-domain 29	[more]
AT2G45420.1	4.7e-35	59.65	LOB domain-containing protein 18	[more]
AT2G42430.1	3.1e-34	58.77	lateral organ boundaries-domain 16	[more]
AT3G03760.1	2.0e-33	47.40	LOB domain-containing protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	PANTHER	PTHR31529:SF50	LOB DOMAIN-CONTAINING PROTEIN 33	coord: 1..159
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..159
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 13..109 e-value: 8.8E-33 score: 112.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 12..114 score: 21.582083

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03520.1	Clc07G03520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus