Clc07G03180 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G03180
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein ZAT12-like
Location	ClcChr07: 3029231 .. 3030433 (-)
RNA-Seq Expression	Clc07G03180
Synteny	Clc07G03180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGGATTGTTGTTGGTCTTGGATTTATATATATATGTATGTATTTTAAAAATGTGATCAGCTAGATCATCGTTGGAATCGTCCATCCAGAAGATTTGATTCACCAAAAATTTGGAAGAAAAGAAAAGAAAAGAACTTGAACTCGGCCACTCACTCAGAACAAAAGAGAGCGTGTGAACTCAGCCACGCGGTAATGTTCTCATGCTGACGCGTTTATTTGATCTCTCATCAACCAAATGACCAAACTAGCCTCACTCGTTTTTTTAATTTTCAAAATCTTTTAATACCCCAACTTCACCAGTACTCCCTCTTTCTTTTGGCACAAGAAATCGAGGGCACAACTGTCATTCCAAATTGTCAACTGACTCCTTTCCTCTCTCCTCACCTATATATATAACCCCAACCAATCCAGTTCGAAAGTCTATTCCTTCACTCAATCGAAACAAAAACGCCATTTCCGTTTCCATTTTCTTCACATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAATACATTTTCCAATATTCCTTCCATCGTCATGAAGAGAGAGAGAGATCTCGAGAGCATAACAACCATGGCGAACTGCTTGATGTTACTTTCTCGTAACACCGCTTCCACTACTGCAGATTTCGAATCCTCCTCGTTGTCTTCTCCGAATCGTGTTTTCGAGTGCAAGACCTGCAATCGGCAGTTTTCGTCGTTTCAGGCGCTTGGTGGCCATCGAGCTAGTCACAAGAAGCCGCGGATTGTTGGAGGCGACGGCGGAAACTCCGATGGATCTTCATCGCAAGGATCTCCGACTAAGCCGAAGACGCATGAGTGTAGTATCTGTGGATTGGAGTTCGCGATTGGTCAAGCGCTTGGAGGACATATGAGGAGACATAGAGCCACGACGCTGTTGACCGATCACGCTCGACTTACTAATCATCCGAATATTTTATCTCCTCCGCCGCGTTCTCAACCGCCTGTGGTGAAGAAGACGAACGGTGGTGGGACGATTCTGTGTTTGGATCTGAATTTGACTCCGTCCGAGAACGATAGTAAGTTTCTGCAGCTTGGAAAGAGTATTTCCATGGTTGATTGTTTGTTTTGATTTTTAGAGTACATATTCAAACAGATCGAACAGGATGAGTATGAGTTTTTGTTTTCCTTTTCTTTTTTGATACTGTAA

mRNA sequence

ATGAGTTCGAAAGTCTATTCCTTCACTCAATCGAAACAAAAACGCCATTTCCGTTTCCATTTTCTTCACATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAATACATTTTCCAATATTCCTTCCATCGTCATGAAGAGAGAGAGAGATCTCGAGAGCATAACAACCATGGCGAACTGCTTGATGTTACTTTCTCGTAACACCGCTTCCACTACTGCAGATTTCGAATCCTCCTCGTTGTCTTCTCCGAATCGTGTTTTCGAGTGCAAGACCTGCAATCGGCAGTTTTCGTCGTTTCAGGCGCTTGGTGGCCATCGAGCTAGTCACAAGAAGCCGCGGATTGTTGGAGGCGACGGCGGAAACTCCGATGGATCTTCATCGCAAGGATCTCCGACTAAGCCGAAGACGCATGAGTGTAGTATCTGTGGATTGGAGTTCGCGATTGGTCAAGCGCTTGGAGGACATATGAGGAGACATAGAGCCACGACGCTGTTGACCGATCACGCTCGACTTACTAATCATCCGAATATTTTATCTCCTCCGCCGCGTTCTCAACCGCCTGTGGTGAAGAAGACGAACGGTGGTGGGACGATTCTGTGTTTGGATCTGAATTTGACTCCGTCCGAGAACGATAGTAAGTTTCTGCAGCTTGGAAAGAAGTACATATTCAAACAGATCGAACAGGATGAGTATGAGTTTTTGTTTTCCTTTTCTTTTTTGATACTGTAA

Coding sequence (CDS)

ATGAGTTCGAAAGTCTATTCCTTCACTCAATCGAAACAAAAACGCCATTTCCGTTTCCATTTTCTTCACATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAATACATTTTCCAATATTCCTTCCATCGTCATGAAGAGAGAGAGAGATCTCGAGAGCATAACAACCATGGCGAACTGCTTGATGTTACTTTCTCGTAACACCGCTTCCACTACTGCAGATTTCGAATCCTCCTCGTTGTCTTCTCCGAATCGTGTTTTCGAGTGCAAGACCTGCAATCGGCAGTTTTCGTCGTTTCAGGCGCTTGGTGGCCATCGAGCTAGTCACAAGAAGCCGCGGATTGTTGGAGGCGACGGCGGAAACTCCGATGGATCTTCATCGCAAGGATCTCCGACTAAGCCGAAGACGCATGAGTGTAGTATCTGTGGATTGGAGTTCGCGATTGGTCAAGCGCTTGGAGGACATATGAGGAGACATAGAGCCACGACGCTGTTGACCGATCACGCTCGACTTACTAATCATCCGAATATTTTATCTCCTCCGCCGCGTTCTCAACCGCCTGTGGTGAAGAAGACGAACGGTGGTGGGACGATTCTGTGTTTGGATCTGAATTTGACTCCGTCCGAGAACGATAGTAAGTTTCTGCAGCTTGGAAAGAAGTACATATTCAAACAGATCGAACAGGATGAGTATGAGTTTTTGTTTTCCTTTTCTTTTTTGATACTGTAA

Protein sequence

MSSKVYSFTQSKQKRHFRFHFLHIQRERERERERERERERERDNTFSNIPSIVMKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGKKYIFKQIEQDEYEFLFSFSFLIL

Homology

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BLAST of Clc07G03180 vs. NCBI nr
Match: XP_038892761.1 (zinc finger protein ZAT12-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 8.0e-89
Identity = 168/175 (96.00%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSRN ASTTADFESSS SSPNRVFECKTCNRQFSSFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRNNASTTADFESSSSSSPNRVFECKTCNRQFSSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           L DHARLTNHP+ LSPPPRSQPPVVKKTNG G ILCLDLNLTPSENDSKFLQLGK
Sbjct: 121 LNDHARLTNHPSSLSPPPRSQPPVVKKTNGSGRILCLDLNLTPSENDSKFLQLGK 175

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BLAST of Clc07G03180 vs. NCBI nr
Match: XP_022995602.1 (zinc finger protein ZAT12-like [Cucurbita maxima])

HSP 1 Score: 325.1 bits (832), Expect = 5.3e-85
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSR++ASTT DFESS  SSPNRVFECKTCNRQF SFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRSSASTTTDFESSLSSSPNRVFECKTCNRQFPSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVG DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           LTDHARLTNHP+ LS PPRSQPPVVKKTNGGG ILCLDLNLTPSEND +FLQLGK
Sbjct: 121 LTDHARLTNHPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLGK 175

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BLAST of Clc07G03180 vs. NCBI nr
Match: XP_023545353.1 (zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 7.0e-85
Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLES+TTMANCLMLLSR++ASTT DFESS  SSPNRVFECKTCNRQF SFQALGG
Sbjct: 1   MKRERDLESVTTMANCLMLLSRSSASTTTDFESSLSSSPNRVFECKTCNRQFPSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVG DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           LTDHARLTNHP+ LS PPRSQPPVVKKTNGGG ILCLDLNLTPSEND +FLQLGK
Sbjct: 121 LTDHARLTNHPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLGK 175

[Close]

BLAST of Clc07G03180 vs. NCBI nr
Match: XP_022957121.1 (zinc finger protein ZAT12-like [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-84
Identity = 161/175 (92.00%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSR++AS T DFESS  SSPNRVFECKTCNRQF SFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRSSASNTTDFESSLSSSPNRVFECKTCNRQFPSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVG DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           LTDHARLTNHP+ LS PPRSQPPVVKKTNGGG ILCLDLNLTPSEND +FLQLGK
Sbjct: 121 LTDHARLTNHPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLGK 175

[Close]

BLAST of Clc07G03180 vs. NCBI nr
Match: XP_022942693.1 (zinc finger protein ZAT12-like [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 2.1e-81
Identity = 161/182 (88.46%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 53  VMKRERDLESITTMANCLMLLSRNTASTTADFESSSLS----SPNRVFECKTCNRQFSSF 112
           +MKRERDLES+TTMANCLMLLSR++A+TTADFESSS S    SPNRVFECKTCNRQF SF
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFESSSSSPPSLSPNRVFECKTCNRQFPSF 60

Query: 113 QALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH 172
           QALGGHRASHKKPRI   DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH
Sbjct: 61  QALGGHRASHKKPRI---DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH 120

Query: 173 RATTLLTDHARLTN--HPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQL 229
           RATTLLTDH RLTN  HP+ LSPPPRSQPP+VKKTNGGG ILCLDLNLTPSENDSKFLQL
Sbjct: 121 RATTLLTDHGRLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQL 179

[Close]

BLAST of Clc07G03180 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.0e-27
Identity = 79/184 (42.93%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 54  MKRER-DLESI---TTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQ 113
           MKRER D E       +A CLM+L++ +          + S  +  FECKTCN++FSSFQ
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 114 ALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHR 173
           ALGGHRASHKKP++        D             H+CSIC   F  GQALGGHMRRHR
Sbjct: 61  ALGGHRASHKKPKLT---VEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHR 120

Query: 174 ATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGKK 233
           ++        +T  P+ +SP   S  PV+K+      IL LDLNLTP END +++  GK 
Sbjct: 121 SS--------MTVEPSFISPMIPSM-PVLKRCGSSKRILSLDLNLTPLENDLEYI-FGKT 171

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BLAST of Clc07G03180 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 75/164 (45.73%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 65  TMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGGHRASHKKPRIV 124
           T ANCLMLLSR         E+       RVF CKTC +QF SFQALGGHRASHKKP   
Sbjct: 14  TAANCLMLLSR------VGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKP--- 73

Query: 125 GGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTLLTDHARLTNHP 184
                N   SS      K  +H C ICG+EF +GQALGGHMRRHR  +     A +T   
Sbjct: 74  ----NNDALSSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVT--- 133

Query: 185 NILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
             L P P      +KK++ G  + CLDL+L   +N +  L+LG+
Sbjct: 134 RALLPEP--TVTTLKKSSSGKRVACLDLSLGMVDNLNLKLELGR 159

[Close]

BLAST of Clc07G03180 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 72/173 (41.62%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 54  MKRER-DLESI---TTMANCLMLLSRNTASTTADFESS--SLSSPNRVFECKTCNRQFSS 113
           MKR+R D E       +   LM+LSR+      D + S  S ++ N  FECKTCNR+F S
Sbjct: 1   MKRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNHFECKTCNRKFDS 60

Query: 114 FQALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRR 173
           FQALGGHRASHKKP+++       D    +    +   H+C+IC   F  GQALGGHMR+
Sbjct: 61  FQALGGHRASHKKPKLI------VDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRK 120

Query: 174 HRATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSEND 221
           HR T+++T+ +        + P      PV  + +    I  LDLNLTP END
Sbjct: 121 HR-TSMITEQS--------IVPSVVYSRPVFNRCSSSKEI--LDLNLTPLEND 156

[Close]

BLAST of Clc07G03180 vs. ExPASy Swiss-Prot
Match: Q681X4 (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21
Identity = 81/194 (41.75%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 66  MANCLMLLSRNTASTTADFESS-----SLSSPNR---VFECKTCNRQFSSFQALGGHRAS 125
           MA CL++L+R T   + D ++S      +SS N    V+ECKTCNR FSSFQALGGHRAS
Sbjct: 77  MAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRAS 136

Query: 126 HKKPRI----------------VGGDGGNS----DGS--SSQGS---PTKPKTHECSICG 185
           HKKPR                    +G NS     GS  +SQ S       K HECSICG
Sbjct: 137 HKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHECSICG 196

Query: 186 LEFAIGQALGGHMRRHRATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDL 224
            EF  GQALGGHMRRHR           T   +  S     +  + +        L LDL
Sbjct: 197 SEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLDL 256

[Close]

BLAST of Clc07G03180 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-21
Identity = 72/168 (42.86%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 65  TMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGGHRASHKKPRIV 124
           T A CLMLLSR                  RVF CKTC ++FSSFQALGGHRASHKK  ++
Sbjct: 15  TTAKCLMLLSRVGEC------GGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKK--LI 74

Query: 125 GGDGGNSDGSSSQGSPTKPKT---HECSICGLEFAIGQALGGHMRRHRATTLLTDHARLT 184
                NSD  S  GS +  KT   H C ICG++F +GQALGGHMRRHR   +      L 
Sbjct: 75  -----NSDNPSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKV---SGSLV 134

Query: 185 NHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKF-LQLGK 229
               +   P  +    +KK + G  + CLDL+L   E+   + L+LG+
Sbjct: 135 TRSFL---PETTTVTALKKFSSGKRVACLDLDLDSMESLVNWKLELGR 163

[Close]

BLAST of Clc07G03180 vs. ExPASy TrEMBL
Match: A0A6J1JZD8 (zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111491061 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.6e-85
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSR++ASTT DFESS  SSPNRVFECKTCNRQF SFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRSSASTTTDFESSLSSSPNRVFECKTCNRQFPSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVG DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           LTDHARLTNHP+ LS PPRSQPPVVKKTNGGG ILCLDLNLTPSEND +FLQLGK
Sbjct: 121 LTDHARLTNHPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLGK 175

[Close]

BLAST of Clc07G03180 vs. ExPASy TrEMBL
Match: A0A6J1GYC8 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111458600 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 9.8e-85
Identity = 161/175 (92.00%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSR++AS T DFESS  SSPNRVFECKTCNRQF SFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRSSASNTTDFESSLSSSPNRVFECKTCNRQFPSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVG DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           LTDHARLTNHP+ LS PPRSQPPVVKKTNGGG ILCLDLNLTPSEND +FLQLGK
Sbjct: 121 LTDHARLTNHPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLGK 175

[Close]

BLAST of Clc07G03180 vs. ExPASy TrEMBL
Match: A0A6J1FVF5 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111447651 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.0e-81
Identity = 161/182 (88.46%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 53  VMKRERDLESITTMANCLMLLSRNTASTTADFESSSLS----SPNRVFECKTCNRQFSSF 112
           +MKRERDLES+TTMANCLMLLSR++A+TTADFESSS S    SPNRVFECKTCNRQF SF
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFESSSSSPPSLSPNRVFECKTCNRQFPSF 60

Query: 113 QALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH 172
           QALGGHRASHKKPRI   DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH
Sbjct: 61  QALGGHRASHKKPRI---DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH 120

Query: 173 RATTLLTDHARLTN--HPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQL 229
           RATTLLTDH RLTN  HP+ LSPPPRSQPP+VKKTNGGG ILCLDLNLTPSENDSKFLQL
Sbjct: 121 RATTLLTDHGRLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQL 179

[Close]

BLAST of Clc07G03180 vs. ExPASy TrEMBL
Match: A0A6J1JDK2 (zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111483429 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.1e-81
Identity = 159/180 (88.33%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 53  VMKRERDLESITTMANCLMLLSRNTASTTADFESSSLS--SPNRVFECKTCNRQFSSFQA 112
           +MKRERDLES+TTMANCLMLLSR++A+TTADFESSS    SPNRVFECKTCNRQF SFQA
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFESSSSPSLSPNRVFECKTCNRQFPSFQA 60

Query: 113 LGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRA 172
           LGGHRASHKKPRI   DGGNSDG+SSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRA
Sbjct: 61  LGGHRASHKKPRI---DGGNSDGTSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRA 120

Query: 173 TTLLTDHARLTN--HPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           TTLLTDH RLTN  HP+ LSPPPRSQPP+VKKTNGGG ILCLDLNLTPSENDSKFLQLGK
Sbjct: 121 TTLLTDHGRLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQLGK 177

[Close]

BLAST of Clc07G03180 vs. ExPASy TrEMBL
Match: A0A1S3CF73 (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103500198 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.0e-77
Identity = 150/175 (85.71%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 54  MKRERDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGG 113
           MKRERDLESITTMANCLMLLSRNTA+   +  S++ SSPNRVFECKTCNRQFSSFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRNTAADHFESSSTNSSSPNRVFECKTCNRQFSSFQALGG 60

Query: 114 HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 173
           HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL
Sbjct: 61  HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 174 LTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
           L D   LTNHP     PP  +PPVVKK+NGGG ILCLDLNLTPSENDS+FLQLGK
Sbjct: 121 LNDARLLTNHPRRSLSPPPPKPPVVKKSNGGGRILCLDLNLTPSENDSRFLQLGK 175

[Close]

BLAST of Clc07G03180 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 83/182 (45.60%), Postives = 105/182 (57.69%), Query Frame = 0


Query: 54  MKRER-DLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALG 113
           M+R R D+E I  MANCL+LLS+   + T           +RVF CKTCN++F SFQALG
Sbjct: 1   MERGRSDMEMINNMANCLILLSKAHQNDT----------KSRVFACKTCNKEFPSFQALG 60

Query: 114 GHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATT 173
           GHRASH++   + G    S          KP  HEC ICG EFA+GQALGGHMR+HR   
Sbjct: 61  GHRASHRRSAALEGHAPPSP------KRVKPVKHECPICGAEFAVGQALGGHMRKHRGG- 120

Query: 174 LLTDHARLTNHPNILSPPPRSQPPVVKKTNGGG--TILCLDLNLTPSENDSKFLQLGKKY 233
                   +      S  P + P  +KK+ GG    +LCLDLNLTP EN+   L+LG ++
Sbjct: 121 --------SGGGGGRSLAPATAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLKLELG-RF 156

[Close]

BLAST of Clc07G03180 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-28
Identity = 79/184 (42.93%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 54  MKRER-DLESI---TTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQ 113
           MKRER D E       +A CLM+L++ +          + S  +  FECKTCN++FSSFQ
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 114 ALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHR 173
           ALGGHRASHKKP++        D             H+CSIC   F  GQALGGHMRRHR
Sbjct: 61  ALGGHRASHKKPKLT---VEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHR 120

Query: 174 ATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGKK 233
           ++        +T  P+ +SP   S  PV+K+      IL LDLNLTP END +++  GK 
Sbjct: 121 SS--------MTVEPSFISPMIPSM-PVLKRCGSSKRILSLDLNLTPLENDLEYI-FGKT 171

[Close]

BLAST of Clc07G03180 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-26
Identity = 75/164 (45.73%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 65  TMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGGHRASHKKPRIV 124
           T ANCLMLLSR         E+       RVF CKTC +QF SFQALGGHRASHKKP   
Sbjct: 14  TAANCLMLLSR------VGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKP--- 73

Query: 125 GGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTLLTDHARLTNHP 184
                N   SS      K  +H C ICG+EF +GQALGGHMRRHR  +     A +T   
Sbjct: 74  ----NNDALSSGLMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVT--- 133

Query: 185 NILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSENDSKFLQLGK 229
             L P P      +KK++ G  + CLDL+L   +N +  L+LG+
Sbjct: 134 RALLPEP--TVTTLKKSSSGKRVACLDLSLGMVDNLNLKLELGR 159

[Close]

BLAST of Clc07G03180 vs. TAIR 10
Match: AT3G46070.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.3e-24
Identity = 76/176 (43.18%), Postives = 92/176 (52.27%), Query Frame = 0


Query: 58  RDLESITTMANCLMLLSRNTASTTADFESSSLSSPNRVFECKTCNRQFSSFQALGGHRAS 117
           RDL ++ T A+CLMLLS                   RVF CKTC R F SFQALGGHRAS
Sbjct: 8   RDL-TVDTAASCLMLLSG---------IGEHDGRKKRVFRCKTCERDFDSFQALGGHRAS 67

Query: 118 HKKPRIVGGDGGNSDGSSSQGSP-TKPKT------HECSICGLEFAIGQALGGHMRRHR- 177
           H K         NSD  S  GSP  KPKT      H C ICGLEF +GQALGGHMR+HR 
Sbjct: 68  HSKLT-------NSDDKSLPGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRN 127

Query: 178 ------ATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSEN 220
                 A+ +L  H+ +         P  +    +KK++ G  + CLD +LT  E+
Sbjct: 128 EKEREKASNVLVTHSFM---------PETTTVTTLKKSSSGKRVACLDFDLTSVES 157

[Close]

BLAST of Clc07G03180 vs. TAIR 10
Match: AT3G53600.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22
Identity = 72/173 (41.62%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 54  MKRER-DLESI---TTMANCLMLLSRNTASTTADFESS--SLSSPNRVFECKTCNRQFSS 113
           MKR+R D E       +   LM+LSR+      D + S  S ++ N  FECKTCNR+F S
Sbjct: 1   MKRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNHFECKTCNRKFDS 60

Query: 114 FQALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRR 173
           FQALGGHRASHKKP+++       D    +    +   H+C+IC   F  GQALGGHMR+
Sbjct: 61  FQALGGHRASHKKPKLI------VDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRK 120

Query: 174 HRATTLLTDHARLTNHPNILSPPPRSQPPVVKKTNGGGTILCLDLNLTPSEND 221
           HR T+++T+ +        + P      PV  + +    I  LDLNLTP END
Sbjct: 121 HR-TSMITEQS--------IVPSVVYSRPVFNRCSSSKEI--LDLNLTPLEND 156

The following BLAST results are available for this feature:

BLAST of Clc07G03180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892761.1	8.0e-89	96.00	zinc finger protein ZAT12-like [Benincasa hispida]	[more]
XP_022995602.1	5.3e-85	92.57	zinc finger protein ZAT12-like [Cucurbita maxima]	[more]
XP_023545353.1	7.0e-85	92.00	zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957121.1	2.0e-84	92.00	zinc finger protein ZAT12-like [Cucurbita moschata]	[more]
XP_022942693.1	2.1e-81	88.46	zinc finger protein ZAT12-like [Cucurbita moschata]	[more]

BLAST of Clc07G03180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLD4	9.0e-27	42.93	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q42410	4.9e-25	45.73	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q9LFG0	1.5e-21	41.62	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]
Q681X4	1.9e-21	41.75	Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1	[more]
Q42453	4.3e-21	42.86	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]

BLAST of Clc07G03180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZD8	2.6e-85	92.57	zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111491061 PE=4 ...	[more]
A0A6J1GYC8	9.8e-85	92.00	zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111458600 PE=...	[more]
A0A6J1FVF5	1.0e-81	88.46	zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111447651 PE=...	[more]
A0A6J1JDK2	5.1e-81	88.33	zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111483429 PE=4 ...	[more]
A0A1S3CF73	2.0e-77	85.71	zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103500198 PE=4 SV=1	[more]

BLAST of Clc07G03180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28710.1	1.4e-30	45.60	C2H2-type zinc finger family protein	[more]
AT2G37430.1	6.4e-28	42.93	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G59820.1	3.5e-26	45.73	C2H2-type zinc finger family protein	[more]
AT3G46070.1	4.3e-24	43.18	C2H2-type zinc finger family protein	[more]
AT3G53600.1	1.1e-22	41.62	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 93..168 e-value: 8.7E-10 score: 40.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 95..120 e-value: 2.3E-12 score: 46.6 coord: 146..170 e-value: 1.4E-9 score: 37.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..145
None	No IPR available	PANTHER	PTHR26374:SF379	ZINC FINGER PROTEIN ZAT12	coord: 65..224
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 65..224
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 96..118 e-value: 0.2 score: 20.7 coord: 146..168 e-value: 0.5 score: 19.4
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 98..118
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 148..168
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 146..168 score: 8.912109
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 96..123 score: 10.346144
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 94..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G03180.2	Clc07G03180.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010200	response to chitin