Clc06G19510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G19510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ABC transporter F family member 4-like
Location	ClcChr06: 29589846 .. 29591172 (+)
RNA-Seq Expression	Clc06G19510
Synteny	Clc06G19510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGAATTCTCTCTTTCAAATACTCTGTCTTTTCTCTAAGCTTTCTCCATCTCATCCTTTCTTTCTTGTGTCTCTGTAGTGCAACTGCAAAGGCAATGGGGTGTGGAAACTCCAAGCTTAATCCGGAAGGAGAATTGATTCCTCCAAGGATTCGCCCACTTCTTCTCCGGAGTAAACTTTCGGAGTTGAGGAAACGCAAGAATGGAACCAATCTTAGAGATGGAACGATGTCAAAGAAAGTGCTTCTCACAGATGGAGAATCAGAAGAAGACAGCTCCATGCTTGTTGATAATAGGAAGAGCATGGGTTGTTCACATGAGGGCAGCACAAATTGCTTGGATAAGGATAAGGATAAGGATGAACATGATTCAGCTTCAGCCATTCCCCTATCTAACCATGCAACAAAAGATGGGGAACAAAGCAATCACCTCTTGGAGGAGGAGGAGCCTCTATCAAATGTACAATTGGAAACTATCCACCCTGATGAAACTCCTGATCTTGAACTGAAACAAGACAAAACCATGGACGAACATAAATGTATCCAACAGGGAGATGAGAACAAGGAAGAAGAAGAAAAAGAGGGGAGTCCTGACAATGATGAGAGTCGAGGCTTAATCTGTCCTGGATCTCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACACAAGATGACAAAGAAAATGGTAAAACGAAAACAAAAAAGAACTTTGAAGCTAAATTTCGAAATCATTGTTGTATTATGACCAACACAGTAGCCATATACATATTGTGCAGTTGAAATGAAAGATGCAGGTATGGAGGAAGATGTCTCACACAAGAAGTCGCCAAGTCATGACAGCGTTGAGAGCACCACTAGTGCAAAATTTGCGGAGGTGGGTTCCCACATTCTCTATCTTTACAAGATTTGGTGTTTGGGATTTTTATTGTGTTTCTCTCATTCATTTGATTTCTTACTTGAACAGGGACATGAGAAGAAGGTGGTAAAGAAAGGGAAAAAAGGAACGACTTTCAATAGAGTCATCAGTAAGAAACGACCAGTTGGCGTTGGTGTGAAGAATCTGTTGAGTGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCAATGACAGAGCCAATCTTCTAGCTAGAAAATCTGAAGCTTAAGATTTTCGTAGCAATGGAAGGGATAGTTTGTACTCCTCCTTTCTTCCTTTACAGGGGTTGGGGAAGGGGGGTTTCATGCTGATTTTTTAGATCATTAGTCCCTCAATGTGATCAAAGCCAACATATATAGGTAGAATTTGTACTTATAATGTAAAATGAATTCATTCATTTAAATCCCTTGTTATTC

mRNA sequence

TGTGAATTCTCTCTTTCAAATACTCTGTCTTTTCTCTAAGCTTTCTCCATCTCATCCTTTCTTTCTTGTGTCTCTGTAGTGCAACTGCAAAGGCAATGGGGTGTGGAAACTCCAAGCTTAATCCGGAAGGAGAATTGATTCCTCCAAGGATTCGCCCACTTCTTCTCCGGAGTAAACTTTCGGAGTTGAGGAAACGCAAGAATGGAACCAATCTTAGAGATGGAACGATGTCAAAGAAAGTGCTTCTCACAGATGGAGAATCAGAAGAAGACAGCTCCATGCTTGTTGATAATAGGAAGAGCATGGGTTGTTCACATGAGGGCAGCACAAATTGCTTGGATAAGGATAAGGATAAGGATGAACATGATTCAGCTTCAGCCATTCCCCTATCTAACCATGCAACAAAAGATGGGGAACAAAGCAATCACCTCTTGGAGGAGGAGGAGCCTCTATCAAATGTACAATTGGAAACTATCCACCCTGATGAAACTCCTGATCTTGAACTGAAACAAGACAAAACCATGGACGAACATAAATGTATCCAACAGGGAGATGAGAACAAGGAAGAAGAAGAAAAAGAGGGGAGTCCTGACAATGATGAGAGTCGAGGCTTAATCTGTCCTGGATCTCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACACAAGATGACAAAGAAAATGTTGAAATGAAAGATGCAGGTATGGAGGAAGATGTCTCACACAAGAAGTCGCCAAGTCATGACAGCGTTGAGAGCACCACTAGTGCAAAATTTGCGGAGGGACATGAGAAGAAGGTGGTAAAGAAAGGGAAAAAAGGAACGACTTTCAATAGAGTCATCAGTAAGAAACGACCAGTTGGCGTTGGTGTGAAGAATCTGTTGAGTGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCAATGACAGAGCCAATCTTCTAGCTAGAAAATCTGAAGCTTAAGATTTTCGTAGCAATGGAAGGGATAGTTTGTACTCCTCCTTTCTTCCTTTACAGGGGTTGGGGAAGGGGGGTTTCATGCTGATTTTTTAGATCATTAGTCCCTCAATGTGATCAAAGCCAACATATATAGGTAGAATTTGTACTTATAATGTAAAATGAATTCATTCATTTAAATCCCTTGTTATTC

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTTAATCCGGAAGGAGAATTGATTCCTCCAAGGATTCGCCCACTTCTTCTCCGGAGTAAACTTTCGGAGTTGAGGAAACGCAAGAATGGAACCAATCTTAGAGATGGAACGATGTCAAAGAAAGTGCTTCTCACAGATGGAGAATCAGAAGAAGACAGCTCCATGCTTGTTGATAATAGGAAGAGCATGGGTTGTTCACATGAGGGCAGCACAAATTGCTTGGATAAGGATAAGGATAAGGATGAACATGATTCAGCTTCAGCCATTCCCCTATCTAACCATGCAACAAAAGATGGGGAACAAAGCAATCACCTCTTGGAGGAGGAGGAGCCTCTATCAAATGTACAATTGGAAACTATCCACCCTGATGAAACTCCTGATCTTGAACTGAAACAAGACAAAACCATGGACGAACATAAATGTATCCAACAGGGAGATGAGAACAAGGAAGAAGAAGAAAAAGAGGGGAGTCCTGACAATGATGAGAGTCGAGGCTTAATCTGTCCTGGATCTCCCAGTTTCAGAGTTTATTTTGTTGAAGAAACACAAGATGACAAAGAAAATGTTGAAATGAAAGATGCAGGTATGGAGGAAGATGTCTCACACAAGAAGTCGCCAAGTCATGACAGCGTTGAGAGCACCACTAGTGCAAAATTTGCGGAGGGACATGAGAAGAAGGTGGTAAAGAAAGGGAAAAAAGGAACGACTTTCAATAGAGTCATCAGTAAGAAACGACCAGTTGGCGTTGGTGTGAAGAATCTGTTGAGTGTTAAATCTTGCTATCATTTAAGTTGTTCTGGCAATGACAGAGCCAATCTTCTAGCTAGAAAATCTGAAGCTTAA

Protein sequence

MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDSSMLVDNRKSMGCSHEGSTNCLDKDKDKDEHDSASAIPLSNHATKDGEQSNHLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDESRGLICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEGHEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA

Homology

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BLAST of Clc06G19510 vs. NCBI nr
Match: XP_008464387.1 (PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 219/298 (73.49%), Postives = 250/298 (83.89%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNPEGEL+PPRIRPLL+R+K  ELRKRKNGT+LRDG +SKKVLL +GESEE++
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  SMLVDNRKSMGCSHE-GSTNCLDKDK------DKDEHDSASAIPLSN---HATKDGEQSN 120
           +M VDNR      HE GST CL   +       KDEH+SAS IP SN   +ATK+GEQSN
Sbjct: 67  AMFVDNR------HECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 126

Query: 121 HLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDES 180
            +L EEEP  ++QL+T HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E+
Sbjct: 127 RIL-EEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEEN 186

Query: 181 RG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEG 240
           RG +ICPGSPSFR YFVEETQDDKE VEMKDAG   DVSHKKSPSHDSVESTTSAK  EG
Sbjct: 187 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 246

Query: 241 HEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
            E KV+KKGKKGTTFNRVISK+RPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 247 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]

BLAST of Clc06G19510 vs. NCBI nr
Match: KAA0057746.1 (ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 219/298 (73.49%), Postives = 250/298 (83.89%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNPEGEL+PPRIRPLL+R+K  ELRKRKNGT+LRDG +SKKVLL +GESEE++
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  SMLVDNRKSMGCSHE-GSTNCLDKDK------DKDEHDSASAIPLSN---HATKDGEQSN 120
           +M VDNR      HE GST CL   +       KDEH+SAS IP SN   +ATK+GEQSN
Sbjct: 61  AMFVDNR------HECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 120

Query: 121 HLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDES 180
            +L EEEP  ++QL+T HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E+
Sbjct: 121 RIL-EEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEEN 180

Query: 181 RG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEG 240
           RG +ICPGSPSFR YFVEETQDDKE VEMKDAG   DVSHKKSPSHDSVESTTSAK  EG
Sbjct: 181 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 240

Query: 241 HEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
            E KV+KKGKKGTTFNRVISK+RPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 241 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 291

[Close]

BLAST of Clc06G19510 vs. NCBI nr
Match: XP_011649820.1 (probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.7e-103
Identity = 215/299 (71.91%), Postives = 245/299 (81.94%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNP GEL+PPRIRPL +R+KL ELRKRKNGT+LRDG +SKKVLL DGESEE++
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SMLVDNRKSMGCSHE-GSTNCL-------DKDKDKDEHDSASAIPLSNH---ATKDGEQS 120
           +M VDNR      HE GST CL       + +  KDEH+SAS IP SN+   ATK GEQS
Sbjct: 61  AMHVDNR------HECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQS 120

Query: 121 NHLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDE 180
           NH+L EEEP  ++QL+  HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E
Sbjct: 121 NHIL-EEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEE 180

Query: 181 SRG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAE 240
           +RG  ICPGSPSFR+YFVEETQDDKE VEMKDA    DVSHKKSPS DSVESTTSAK  E
Sbjct: 181 NRGSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDE 240

Query: 241 GHEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
           G E K +KKGKK TTFNRV+SKKRPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 241 GQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of Clc06G19510 vs. NCBI nr
Match: KAE8652373.1 (hypothetical protein Csa_013810 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 4.4e-75
Identity = 179/298 (60.07%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNP GEL+PPRIRPL +R+KL ELRKRKNGT+LRDG +SKKVLL DGESEE++
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SMLVDNRKSMGCSHE-GSTNCL-------DKDKDKDEHDSASAIPLSNH---ATKDGEQS 120
           +M VDNR      HE GST CL       + +  KDEH+SAS IP SN+   ATK GEQS
Sbjct: 61  AMHVDNR------HECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQS 120

Query: 121 NHLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDE 180
           NH+L EEEP  ++QL+  HPD+TP LELKQDKTM+EHK                      
Sbjct: 121 NHIL-EEEPQPHIQLKATHPDDTPVLELKQDKTMNEHK---------------------- 180

Query: 181 SRGLICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEG 240
                                      EMKDA    DVSHKKSPS DSVESTTSAK  EG
Sbjct: 181 --------------------------FEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEG 240

Query: 241 HEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
            E K +KKGKK TTFNRV+SKKRPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 241 QENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 243

[Close]

BLAST of Clc06G19510 vs. NCBI nr
Match: XP_022921428.1 (uncharacterized protein LOC111429712 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 5.6e-70
Identity = 162/291 (55.67%), Postives = 206/291 (70.79%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKL PEGE I P IRPLL R+K +E RKRKNGT+LR+  +SKKVLL +GE EE++
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SML-VDNRKSMGCSHEGSTNCL--DKDKDKDEHDSASAIPLSNHATKDGEQSNHLLEEEE 120
           S+L V NR S+  SH+G T CL   ++   DEHDS +A              NHLLE+ +
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNA--------------NHLLEQHK 120

Query: 121 PLSNVQLETIHPDETPDLELKQDKTMDEHK-CIQQGDENKEEEEKEGSPDNDESRGLICP 180
           P           D    +ELK++KTM+  +  +++GD+  +EE +EG PDN+++R LICP
Sbjct: 121 P----------NDNGTRVELKENKTMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICP 180

Query: 181 GSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEGHEKKVVK 240
           GSPSFRVYFVE+T +DK+NVEM D G  ED S KKSPS DSVES++S K  EG E K +K
Sbjct: 181 GSPSFRVYFVEQTPNDKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIK 240

Query: 241 KGKKGTTFNRVISKKRPVGVGVKNLLSVKS-CYHLSCSGNDRANLLARKSE 287
           KGKKGTT NR  S++RPVGVG+K+LL+V + CYHLSC+GNDR N LARK+E
Sbjct: 241 KGKKGTTLNRAGSRERPVGVGLKSLLNVNNCCYHLSCTGNDRVNHLARKAE 267

[Close]

BLAST of Clc06G19510 vs. ExPASy TrEMBL
Match: A0A5D3BHA4 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00270 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107
Identity = 219/298 (73.49%), Postives = 250/298 (83.89%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNPEGEL+PPRIRPLL+R+K  ELRKRKNGT+LRDG +SKKVLL +GESEE++
Sbjct: 1   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 60

Query: 61  SMLVDNRKSMGCSHE-GSTNCLDKDK------DKDEHDSASAIPLSN---HATKDGEQSN 120
           +M VDNR      HE GST CL   +       KDEH+SAS IP SN   +ATK+GEQSN
Sbjct: 61  AMFVDNR------HECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 120

Query: 121 HLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDES 180
            +L EEEP  ++QL+T HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E+
Sbjct: 121 RIL-EEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEEN 180

Query: 181 RG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEG 240
           RG +ICPGSPSFR YFVEETQDDKE VEMKDAG   DVSHKKSPSHDSVESTTSAK  EG
Sbjct: 181 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 240

Query: 241 HEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
            E KV+KKGKKGTTFNRVISK+RPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 241 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 291

[Close]

BLAST of Clc06G19510 vs. ExPASy TrEMBL
Match: A0A1S3CLT6 (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107
Identity = 219/298 (73.49%), Postives = 250/298 (83.89%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNPEGEL+PPRIRPLL+R+K  ELRKRKNGT+LRDG +SKKVLL +GESEE++
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  SMLVDNRKSMGCSHE-GSTNCLDKDK------DKDEHDSASAIPLSN---HATKDGEQSN 120
           +M VDNR      HE GST CL   +       KDEH+SAS IP SN   +ATK+GEQSN
Sbjct: 67  AMFVDNR------HECGSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 126

Query: 121 HLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDES 180
            +L EEEP  ++QL+T HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E+
Sbjct: 127 RIL-EEEPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEEN 186

Query: 181 RG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEG 240
           RG +ICPGSPSFR YFVEETQDDKE VEMKDAG   DVSHKKSPSHDSVESTTSAK  EG
Sbjct: 187 RGSIICPGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEG 246

Query: 241 HEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
            E KV+KKGKKGTTFNRVISK+RPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 247 QENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]

BLAST of Clc06G19510 vs. ExPASy TrEMBL
Match: A0A0A0LNT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 8.3e-104
Identity = 215/299 (71.91%), Postives = 245/299 (81.94%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKLNP GEL+PPRIRPL +R+KL ELRKRKNGT+LRDG +SKKVLL DGESEE++
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SMLVDNRKSMGCSHE-GSTNCL-------DKDKDKDEHDSASAIPLSNH---ATKDGEQS 120
           +M VDNR      HE GST CL       + +  KDEH+SAS IP SN+   ATK GEQS
Sbjct: 61  AMHVDNR------HECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQS 120

Query: 121 NHLLEEEEPLSNVQLETIHPDETPDLELKQDKTMDEHKCIQQGDENKEEEEKEGSPDNDE 180
           NH+L EEEP  ++QL+  HPD+TP LELKQDKTM+EHKCIQ+GDEN ++E ++G PDN+E
Sbjct: 121 NHIL-EEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEE 180

Query: 181 SRG-LICPGSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAE 240
           +RG  ICPGSPSFR+YFVEETQDDKE VEMKDA    DVSHKKSPS DSVESTTSAK  E
Sbjct: 181 NRGSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDE 240

Query: 241 GHEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCYHLSCSGNDRANLLARKSEA 288
           G E K +KKGKK TTFNRV+SKKRPV VGVKNLL+VKSCYHLSCSGNDRANLLARK+EA
Sbjct: 241 GQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of Clc06G19510 vs. ExPASy TrEMBL
Match: A0A6J1E3W4 (uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC111429712 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 162/291 (55.67%), Postives = 206/291 (70.79%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKL PEGE I P IRPLL R+K +E RKRKNGT+LR+  +SKKVLL +GE EE++
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  SML-VDNRKSMGCSHEGSTNCL--DKDKDKDEHDSASAIPLSNHATKDGEQSNHLLEEEE 120
           S+L V NR S+  SH+G T CL   ++   DEHDS +A              NHLLE+ +
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHTKQENHMDEHDSPNA--------------NHLLEQHK 120

Query: 121 PLSNVQLETIHPDETPDLELKQDKTMDEHK-CIQQGDENKEEEEKEGSPDNDESRGLICP 180
           P           D    +ELK++KTM+  +  +++GD+  +EE +EG PDN+++R LICP
Sbjct: 121 P----------NDNGTRVELKENKTMNNQRTAVEEGDDENKEEGEEGRPDNEDNRCLICP 180

Query: 181 GSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEGHEKKVVK 240
           GSPSFRVYFVE+T +DK+NVEM D G  ED S KKSPS DSVES++S K  EG E K +K
Sbjct: 181 GSPSFRVYFVEQTPNDKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEGQENKTIK 240

Query: 241 KGKKGTTFNRVISKKRPVGVGVKNLLSVKS-CYHLSCSGNDRANLLARKSE 287
           KGKKGTT NR  S++RPVGVG+K+LL+V + CYHLSC+GNDR N LARK+E
Sbjct: 241 KGKKGTTLNRAGSRERPVGVGLKSLLNVNNCCYHLSCTGNDRVNHLARKAE 267

[Close]

BLAST of Clc06G19510 vs. ExPASy TrEMBL
Match: A0A6J1JK15 (uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485806 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 163/292 (55.82%), Postives = 206/292 (70.55%), Query Frame = 0


Query: 1   MGCGNSKLNPEGELIPPRIRPLLLRSKLSELRKRKNGTNLRDGTMSKKVLLTDGESEEDS 60
           MGCGNSKL PEGE I P IRPLL R+K +E RKRKNGT+LRD  +SKKVLLT+GE EE++
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  SML-VDNRKSMGCSHEGSTNCL--DKDKDKDEHDSASAIPLSNHATKDGEQSNHLLEEEE 120
           S+L V NR  +  SH+G T CL   ++  KDEHDS +A              NH LE+ +
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNA--------------NHPLEQHK 120

Query: 121 PLSNVQLETIHPDETPDLELKQDKTM-DEHKCIQQGDENKEEEEKEGSPDNDESRGLICP 180
           P           D    ++LK+DKTM ++HK +++GD+  + E +EG PDN+++R LICP
Sbjct: 121 P----------NDNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICP 180

Query: 181 GSPSFRVYFVEETQDDKENVEMKDAGMEEDVSHKKSPSHDSVESTTSAKFAEGHEKKVVK 240
           GSPSFRVYFVE+T ++K+NVEM D G  ED S KKSPS DSVEST+S K  E  EKK +K
Sbjct: 181 GSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIK 240

Query: 241 KGKKGTTFNRVISKKRPVGVGVKNLLSVKS-CYHLSCSGNDRANLLARKSEA 288
           KGKKGTT NR  S+KRPVGVG+K+LL+V + CYHLSC+GNDR N L  K+E+
Sbjct: 241 KGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAES 268

[Close]

BLAST of Clc06G19510 vs. TAIR 10
Match: AT5G50830.2 (unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-11
Identity = 94/310 (30.32%), Postives = 138/310 (44.52%), Query Frame = 0


Query: 1   MGCGNSKLN-------PEGELI--PPRIRPLLLRSKLSELRKRKNGTNLRDG-TMSKKVL 60
           MGCG S+L         EG ++  P  IRP LLR +L E++KR +   L+   T+SKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRP-LLRRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  L-----TDGE--SEEDSSMLVDNRKSMGCSH---EGSTNCLDKDKDKDEHDSASAIPLSN 120
           L      DGE   E D S+    + +    H   E      +K   KD+        + N
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKEVKEEVVVN 120

Query: 121 HATKDGEQSNHLLEEEEPLSNV---QLETIHPDETPDLELKQDKTMDEHKCIQQGDENKE 180
              +D    + + ++EE    V   Q E  H D+   + +K           ++GD+ K 
Sbjct: 121 KQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVK-----------KEGDDGKN 180

Query: 181 EEEKEGSPDNDESRGLICPGSPSFRVYFVE-ETQDDKENVEMKDAGMEEDVSHKKSPSHD 240
            +  EGS +N + R +I PGSPSFRVY V+  + DD E  +++DA        +KS   +
Sbjct: 181 HDVDEGSINNFDER-MIGPGSPSFRVYCVDVPSDDDDEEKDVEDA--------RKSMETE 240

Query: 241 SVESTTSAKFAEGHEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCY-HLSCSGN 286
           SV  TT  K  +G   K  KK ++G  F   + +K    V          CY    C GN
Sbjct: 241 SV--TTEIKEVDGSIVKKEKKERRGKRFGIALPRKYLANV-------TAPCYAGGGCMGN 280

[Close]

BLAST of Clc06G19510 vs. TAIR 10
Match: AT5G50830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-10
Identity = 94/310 (30.32%), Postives = 138/310 (44.52%), Query Frame = 0


Query: 1   MGCGNSKLN-------PEGELI--PPRIRPLLLRSKLSELRKRKNGTNLRDG-TMSKKVL 60
           MGCG S+L         EG ++  P  IRP LLR +L E++KR +   L+   T+SKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRP-LLRRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  L-----TDGE--SEEDSSMLVDNRKSMGCSH---EGSTNCLDKDKDKDEHDSASAIPLSN 120
           L      DGE   E D S+    + +    H   E      +K   KD+        + N
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKEVKEEVVVN 120

Query: 121 HATKDGEQSNHLLEEEEPLSNV---QLETIHPDETPDLELKQDKTMDEHKCIQQGDENKE 180
              +D    + + ++EE    V   Q E  H D+   + +K           ++GD+ K 
Sbjct: 121 KQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVK-----------KEGDDGKN 180

Query: 181 EEEKEGSPDNDESRGLICPGSPSFRVYFVE-ETQDDKENVEMKDAGMEEDVSHKKSPSHD 240
            +  EGS +N + R +I PGSPSFRVY V+  + DD E  +++DA        +KS   +
Sbjct: 181 HDVDEGSINNFDER-MIGPGSPSFRVYCVDVPSDDDDEEKDVEDA--------RKSMETE 240

Query: 241 SVESTTSAKFAEGHEKKVVKKGKKGTTFNRVISKKRPVGVGVKNLLSVKSCY-HLSCSGN 286
           SV  TT  K  +G   K  KK ++G  F   + +K    V          CY    C GN
Sbjct: 241 SV--TTEIK-EDGSIVKKEKKERRGKRFGIALPRKYLANV-------TAPCYAGGGCMGN 279

The following BLAST results are available for this feature:

BLAST of Clc06G19510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464387.1	2.6e-107	73.49	PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo]	[more]
KAA0057746.1	2.6e-107	73.49	ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYJ98429.1 AB...	[more]
XP_011649820.1	1.7e-103	71.91	probable DNA-directed RNA polymerase I subunit RPA43 isoform X1 [Cucumis sativus...	[more]
KAE8652373.1	4.4e-75	60.07	hypothetical protein Csa_013810 [Cucumis sativus]	[more]
XP_022921428.1	5.6e-70	55.67	uncharacterized protein LOC111429712 [Cucurbita moschata]	[more]

BLAST of Clc06G19510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc06G19510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHA4	1.2e-107	73.49	ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CLT6	1.2e-107	73.49	uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=...	[more]
A0A0A0LNT2	8.3e-104	71.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1	[more]
A0A6J1E3W4	2.7e-70	55.67	uncharacterized protein LOC111429712 OS=Cucurbita moschata OX=3662 GN=LOC1114297...	[more]
A0A6J1JK15	3.5e-70	55.82	uncharacterized protein LOC111485806 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Clc06G19510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50830.2	4.8e-11	30.32	unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 1...	[more]
AT5G50830.1	9.0e-10	30.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G19510.1	Clc06G19510.1	mRNA