Clc06G15300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G15300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein disulfide-isomerase LQY1
Location	ClcChr06: 26204586 .. 26214159 (+)
RNA-Seq Expression	Clc06G15300
Synteny	Clc06G15300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCAGACGACGATTCTCATCCGAGCTCTCACTCGTAACCCAAAATCTCTGTACTGAGAGTGAGAATCAACAAATTATTTCTCCCTTCCATTTCCACTTCCAATTCCATCCATGTCTGCGCTACCTTCTACGGCCGCTCTTCACGTTCTTCCACACCTTCCATTGCTAAAATCTGAAGTTTCTCTTCTTCATTGCCGCTCTTGTACTTCAGCGGCAACCGCTTCTTCCGCCCTCTCCACTTCCGCCGCTGCTATACGCTCAATTCGCCCTCTTATCCATCCCCTTTTGCTCTTCGACACCTTCGACGCTCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTCTCCCTCTTTCTTGGTCTTAAGGTATCATTTCTTTGAATTCTCTCTCGTCTTATGCTTATGAACGCTCTGAGGGATTTCTGATGAAGCAATAGTTTCAAAGTTGTGGGGATTTTGGTTTAATTCTAACACATGTTAGTTTGGATTGGATTCGGCAGGGTGGTCCTGTGCCTTGTGAGCGTTGTGCTGGAAATGGTAAATATAGTTTGTTTCGGATTTGCATTCTTTATTCTGAAATTTTCAATTTAGCCTAGGTTTTGTTCATGACGATCCCCCATCATACTACCAAAATTTACTAAGGCATGAATTATGAATGATGTAGCAATGTTAAGGGATTCAATATGAACTTATTGCTACGTTACTGTCTTCGTCATCTCCTAGCACTGTCTTTATTTATTGATTGAATAGTTTTACAATGCATAAGTTCTTGCTTTCAAGTGTTCAATGAACATCACGGCTTTGGATGCATCATATAGGAGTACATATGTTGGCATTAATCCAGAGGAAGCAATATTATAATCATATTCATAGTCTTGAACATGTGGCGTGGTTGTTAACTGCCCTTTGAACCAATTCATACTTTGTATTGTTTTTCTGATTTTTTTTGTTTAGTTGGTTTAAATTAGTCTTAAGACTAATAAGTTGGTTAAGGCATATATGATCGATCAAAATGTTAGAGATTCACTCTTGCATCTTGGTAAACTCACTTTAACCTTAGTCTAGCAAATTCTTTGGAGGGAGGTCATTGCTTGTCCTTCACAAATAGATAGATTATGTGAATATTTAATCTTGCAAATTTAATAAGGCCGGTTTGATTGCATTTTGACTATGGCATCTATACTGGAATCCCACATTTAAGGGTTGAGAAGTCTTCCCTAAAAGACCAAAAGTAAAACTTCTGGTTGTACTTCTGGTTCATTTCGGGAAGGAGTTGATAGTTTTAGCCTTTTTAGAAAGGGTAACGATTTGTTCCACCAAATCCCATGCATTCCCTTTTCTATAAATAGTAGAAAAATAATAAAAATAATTCAATTTTAAAACAAAATTGCTACATGACATATTTTGATTGGGTGTTGTCTCGAACCTAAACTACGATGCATTTTCACATCTCGAATTCATAATTGTTTTTAATGTGGACCGACAAATTAGCAACATTTGAAGGAGTCTAGAATTTGCAACTCATTGAATATAGAATTAGCTATTAACTGCTATTTAATACAGTTGGTAATCTATGTAGAGGCTAATTCTCCTTAAATGAATGCTTTTGTCTCAAAAGTTTCTTAAACATCTCATTACTCAATAATTTGGCTAACTATGTGAATGTGCAGGTGGCACAAAATGTGTTTTCTGTGACAACGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGTATTTACTTTTTCTTCTACTTTCAAATTACATCAAGCGTTTTTTGTTTTTCTACCATAGCTGATGACCAGTCTCACAGTGTATCCTACAACTAAGGTTTAAAATATCGATGCTTTAAGTTTACGGAAATTTTGATGGAAATATCAATTTCAATGGATATTTCTGGAAAAAATAAAAAATTCAAAAAATAAAGTTAAATTAGTAAATAAACATGTTATGATTTTTAAAAGTCTATTATTTATATCATGTTTACATTAGTTACATTTTGTTGCTTGCTTTTTTATGTTTCGTAGATTTTTCTACGATACAGTTGAAATGTTGATTCACCTCTCATGTCGATGTCGAACCCATAGAAACATAAAAATATCGACATGTCGATAGAAATTTAATATTATGCCTACAACATGTTGGGTGTTGGGAAAAAAATTATGTATTTGTGCAGAACTTTTACTTTTAGCCTGATGACCACTTTTTGAGAGATATATCGAAATTAACCTGTTAGGTTTTATTACCGGCTAGATCAAGCTGTCCAGTCCTTTTGAAGCTTAAGTTAAAGAGATGTTCTCACTTGGTTGATTCCATTATTCTTGGCTTGGGTGCAAGTATTTTTAATATCTATTAAATTTGAATCTCAAGTTAGACTTTTTTGCTTGTTATTTGAAACTTCCTTTCAGATCAATTTCATCGTTATTACATTTTTCATCAGCAATTTAAAATCCAATATCGCAAGTTCTTTCTTTTTTTTTTTTTTTCCCTTCTCTCGTTCTCCATTCATGTATTATTAATTTCTCTGCAGGATTGATCTTTTGCAAAAAATGTGGGGGTTCTGGATATTCTAGACGGCTTTGAACCTTCGTGTGAAAGAGCAATGTAATTCCTGACATTGTGTTTCAACTTACTCAGGGTAACGATTCAATTTATTAATATCATTGAGTCCTAAATAGTTTCTTCTTCATTAGAGGGGTGTCCAGTTGTTATGTAAATTAGTTTTCCTATAAGATGAAAGTGGGATAAAAATAAACTCGAATTAGGGCATCCACTCTCTCTCTCTGAAATACACACATATATATTAGCATGCTTAAGAATAGCTTATTGAAAGGAAAAAAAAAAAAAAAAAAAAAGTCAAAGGGATCAATCAAATAACGCAAAATCAGCACAATCGTGACCTGCACATATACATAAATTGTAACAGTTAAATGAAAACTTAACTGTGATGTAGATTTCCCTCCCCTAACAATAGTTTTGCCTCCGTAACCGAAGAACGAATGCTTTTCAACTGTTCTTCAATTTTTTCTGATAAGAAGCATGAGCTACGCCTGTTATCCTCTAATAATTGGGTCATTTTTTGGACGGCTACTGACTTCACAGTTACCAATTCCTCCATCCTTCTATGCTCCATCTGCAGTTCTTCTTCCAAAATTTTTATTTCTGCCTCCTTCAGGCCAGCTTCAAACATGCACTCTTGGTACTCCAAAATAATGTTCTCAAATTCGGTTATTCCAGCATCACGAATTTCCAACAGCGTCTTCTTCTCATTGATTACCCCCTGAACTGCAACTTCCATCTCGTCGACCGACCTTGAAGCTTTCTGTACCTCCAACTGAACAACCTCAATATCATTATCAACCTTTCTAGACTTCCTTGTCAAATCTTCGAGTTCCTTTCTTATGACCCCAAGTTTTTCTTTAGCTAGCTTCATTTCATTTTGCAACTTAGTTTTCTCTTCCGCAGACTTGAGTAGATCTGTGGCTCGACCAGCAAATTGCCAGTTCTTTGGTTGGGAATCTGTTTTCTCGATATTATCTATTGCAAAGAGGACCTTGTCATTTTCCTGTTTTTGACTTTCTTCATCTAATTTAGATTTTAAGCTTGCAAGGTTGCCCCTAAGTTCCATTTCAGATTGTTGAATCTTTACATGTCGAGTCTCAATTTCTTCTTTGCGTGCTTGAAGGAATACCAACTCTTTTTTCCTCTGGTCCAAATAAGACTTTGAAGCATCTGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATAAAATATTGAAGAAGAAAAGTTATTTAGAGAATATCTCAGAGCGGAAAACTTATTCTTTGCAAGATCTCTACTTTCTTGCTTTTTCGAGAAGGCAAGTTTAAAGGATTCAACCTCCTTCTGCTTTAACTGAACTTCATCTTCCACAACTTCAACCTGTTTTGAGAGTTTATCGGCCTCAAATATCATTTTCTCAAGTGAACTTAAAACGGTGACAGTTCTGGATGAATCTGAAAGCTGTTCATCTGCTCTTTCGAGCTTCTTCCTGATCGTACTTAAATCTTCTGGTAATATTTCTACAATTAGAGCTGGTGGTTCAATTTCCATACAACTTCCAATATCCATCTGCTTTGCATTGTCCAAAATAGACATATCTTTCTCTTCAACACACTCGTTTTCTTCATCCAACCCACTCCCTCCCTTCACATCGAAATTTATGTTGGAACATAATTCATCTGCAACAATACCATCATTTCGTTCTTCAATAGAACTTTCTTGACTTTGAATGGACTCGTTGCTCGCTTCTGCTCCATCGAGCATTTCCATTTCAGGTGGTACAGATTGACAGATCAACTTTTGTGCTTCATTTGGTTTGAGAGGTCGTCCAATAGAATTTTCTTGGCTTTGAATGGACTCGTTGCTCTCTTCCGCTCCATCGAGCATTTCCATTTTAGGTGGTACAGATTGAAAGACCAAATTTTGTGCTTCATTGGGGGGTTTGAGAGTTTCTTCAACGCATGCCTTGTTCATCCCATCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTCTGGTGTCAACTTGTGTGCGTTCTAAAGAAGAAAGCATCTTTTTAAGCTCATTTTTCTCCTGCATGGCCCCTTCATACAAACTCATTAACTTATCATTTTCCTCGTGCATTTCCACTAGCTGTTGCTGTAGCCTCTCAACCGCTTTCTCATGATCCTCATTTTCACTGGAAATTTCGACCACTTTAACATCATTCTGTGCTGTTTCAACTTTATTTTCATTTCCATACTTGCATTCAGAAGCTGCCGTTTCATACAGCTCAATGAGTTTATTGTTATCCTCTATTAAAACTCTTAGCTTCATCCGAAGTTCATCATTTTCTTTAGACAAAGCTATTGCCGTTTCATGAGCATTTGCTTCTCTTTGGCTAGCAGCAGCAATGGCATCGACCATCGTCTTTAACTCCACTTGGTCGCTAAAATTGATGGTGGACGTGTCAGTTGATGCCAAAGGAAGTTCAACTTGGTTAGATCCAGCCACAGGTCCAGTATACTCCTTAGACCCGAATTTTGCTACCAATTCATCTACATGCCTGCAAGATCAGATGCTTGAGTTGCTATCATAGAAGTCAACTTAAGAACCAACATTATAAGTAATAATAACAATAATTATAAATATCAATTAGCACTAGCTGTAAAAGAACACTCTCACAAAACTAAATAACCTTTTACATATTTACATATTACAGAGCATATAATACTACCTTTCCAACTTTTCCTTCTCTTCGAGGCAGAGTTCAAGTTTCTTGCGAAGTGTATCCACTTCGTCTTGGTTATGAATGGCCTAAAACAGTAATATTCACATCATCAAAACCTAAATATGCAATAGACAATCAAGTAGAATGAATTTGGGAGACAGAACTAAGCGTCTTCTATATTGCACCCATATTATTAAAGCAAGTGTACTACCTGCATGCGAAGGAATTCATTCTCCTCGTTGATTGAAGATTTCCATGGTGATCCTCGCTCCTAAATTCGAAAGATGAGCAAAGAACCGTGAGAATCCCATTCACTGGGAGTAACTGATGCTTGAGATAAATTTATCCCACAAAAGCAAACTGGTTATATGGCTATTAATCAATGGCCCAATTCCATGTTCTCCCTATATAAAAGTGATGAAAGAATTGCACTGCAAATGAACTACAGATTTCAGCGATTTAAGAAATAACTTCAGCATTCAATCAATCATAAAATCATGTTCAACTGTCACTAAGATTGAAGTACACAATCTTTCTTCATTCGATTCTTCTAGTAAAATAGGAACTCTCTCCTATTGGGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTAAGATAATAACTCAGTCTAACCTGATTGGTAAGAAAGTTTTCTTCATCGCCATCTGCTATCATGTCTGAATTTCCTTTCTGCAATATGGCATTTACATATAGAAGTTAAGGGTGTGGCAGTGAAATTCATTTAACGATACTTCACCTAAAATTCAGAAAAAGATCTGTAGAAGTACCTGGATTGACGAGGGATCTGACTCATGCATAAGTTTCCAATCAAGTGCTTCCAGTAACTGTAGATTTGCTTGCAAGAAACATAACTTCATTAGAAACTAAAATTTGTTGCCATTAGTTCTAAAATAAAATGGGAAGGATTCTATTTAATCCTTTTACCTTGTTCTCCAATACCATGATCTGGTCGTGCACCATCTCCCGTTCGCCCTCTTCATAAAATGACTTCAACCTGTAGATTAATGCAGCTTAGATAAGGAAAGAAAAAGGAAAATTACTGATGTTGCAGAAATTAGACTAATTTTATAGGATATACATTTTCTAAAATATGAATCTCTTGTCTCAAAGTTAAGATCAGTCCCACATAAATATTTGAAATGATTCCATATGATCCTGAACTATAGTAAGCTCCATTAGTGGACTTGAGAAAAAAATAGTTAAATAGTTGTGCGAAGAAAGACGGTTGAAGCTGTTAGAAAGAACCTGCCTTCTAATTTCTTCCTTCAAACGCAGGTTTTCCATAGCAAATCTGGTCACCTCTTGGTTCCTATCAACCTGATTTCTCAAAACCTCAATTTCCTTCAAATGTTCCTCCTTTTCTTTCAGCAAGTGTGTTTCTGCAGAGATCTTTCCAGAAGCAACTGCTTCCAACCTCTTTATTCCTGCTTCACGAAACCGCAGTCTCATTTTAAGACCTTGTATTTCATCCTCTCTTTGCTTGGCCTAACCATACCAAACAAGAATTGTCAACAAAGAGAAACTAGATATCTTCTGCAAAAGCAAATGGCAATCGCCATGTCTTTGTTCCAACTTCTACCATTATTTAAATTCTTCATTAAATGACAAGGATAATTATATGTGGAAGTCTGCTGCGCAGCCATGAACCAAGAAGCAGCAGTACTTTGGTTAACGTACCAGTTGCATTGCTGCCTGATTTTCTTTAGTCAATGCTTGCAACGCCATGTCCTTATCCTTTTCTCTTCTAAAGGCCCCAACAAGGGCAACTTCATAGTCTCTCCTCTGAAATATGTTAAAATTAATAACAAATTAATAATTTCAAAATAATTTCCTCCAGCTTAAGAGGGTATCGGTCGATACCTGAGTCATCCTTTTGCCAGTTGTAAGAGGACTCATTGATCCGTAAAGTCCTTCCCATTTTAAGGTTCCTGGAGATCCCGGGAAGCTTACTGCTAAACTGTCGTTCTCTTGATTATCTCCTCCTCCACTAACTAAACCCCGTAACCTGGAAACTTCTTTCTGAAAATTGCACAAGAGTGTAAATTAGCAATAACCCGAACCACACTTTACTGAACTCAGAAGATGCAGTTAATTAATTTGTATTTCATATCTTTTTCCAGATTCATGTAGAAACTTTAACAACCCGGATGAAAGAGTACAAGCCAAGTTCAGAGTAAACATCTTGGTACCTTAAGTTGTTGAATCTGTAGTCTCATGGCAATTACGTCTCCAGAAGTGTCTTCGTTCACAATTGCCTAAGTAAAAGCACATATTTAATGATGAGCACCGAAGAAAATAGTTGATAACATCACTTCCAAGTTTTCAAAAGATAATTAAATAAATATCTGGTGGATGGCGAGCCCATATTGCTACCATCTTCAATAAGCTGAGAAAAGAAAGCATACAAAATTGGGTACAAACATACATACATTGTTCTTTATAAATTTAGCACGTTGTGCAAACTTCAGAGTGCTTAGCGTTTCCAAAGAACAGCTGCAAGGACCCAAAACAAAGTTTCAAAGATTCAGACAAGCGTAATGGGAAAAAAGAATCAATAGGATTTTGCATACAAAAAGAAAAGGAGAGAAAAATACAGAGAAAAAACTTGAGCCCAAAACAATAATAATAATAATAAATTATCTACATGATTAAGTGCGAATTGGTAAAACAGCAATTCACTAACCAGCTTGAAGGACTGATATTTGCAATTATGATCGTTTTTGCATTTCCTCCCAAAGAATCCTGATACAACGCAAGTTCATAAAACAACTAATAAGTTACAAAAATTACATCCTTGCGTTATTTTAATGTATCGAGTATCAGTACCATTGCTATTTTTGATGAAATATCTTTTCTCTGAGTACAATAGTAATTGCTTAATTAAATGATCAGATGTATCAAAATGCAGGTTTGATCAAGTTTCTTAACTTCAGAAAAGTGATATAAAATTTCGTTGATATAAGGAACTGCATTTCGATACCTGAAGCAGAAATGTAAGCTTGGAGTCCCTGTAAGGTACGTGAAGCGATTTCCCATTGGATATGTTCACTAGGTTCATTATCACAAGCCTGTAGTTTTAGACACGTTCCATAACCAAAATTCTTGAGTTCAGCAAATCATTCTGGTTTCTTCTACAAGTTAACAAATTTAAGATAAAACTTAAAAGCTTAAAAAACATACCCTAATGTAGAAAGAGATTTGTTGATGTTAGTAGCTTCTTTAAGACGTTCACCTTCAGCTCCAGAACTCTTCTGCCTGGTTAGGATCCATATATAAAGCTCACGAATAAAAATTGCAAACGCATAGGTGGAAGCATGCTCGTGGAAGGAAGTGAAACTGATTGATATTTCGTTTCTTAAAATTAGATAATTCAATCGCTCTTTCAGATGAAATGCATACGTTTGCTTTGTTATCTTTTTGAAAGACATTTCAAGCGCTCCTACAGATGAAAATAATAAGATAACAGGGTGAAAAGTGTTGAAAACAGGGTGAAAAGTGTTGAAAATTTTGACTGGCTTCTTTAGAGTGCATTGCATTGTCTTCTTTTTAGTTACTTCGCGTGCAATAGTAGCATAGTGGAAGGAGGTGGAAGGAGGGAGATGTTTTGTAAGATGGATAATTTACCTTTCTGATCCAGCTAAATCAACAAGATTAAGTCGAGCGAAACGATGGTGAGTTACGCCTTGGGATTCCCACTAAGAAGAAATATTTAATAAGTCAATTATCTTAAACTGGAAACAATACGAGGTTTAATATTTAAAAGACGAACTTTTCTCCAGAAGAGTCGGTTCTTGAAATTTACCTTGCTTTCAATGATGCATGTAAATACACTATGGGAACGACTGCTAGCACGATTCATATTGGTGGATGCCACCTTTCTGTTTGCAGCGCCCTGAAATCATAATCCATAGGGAACTTTCGTTTTAAAAGCACATTTAAAGTCAGCAAACTAAACCTATCCTGTAATCTCCTGAACATTTAATACTGATGTGCATATACGGATATTGAACTGTTTGGAAAAAGCTTAGAGTGTCAAATAGGGATTAGTAACCGATTTCAGTCCACCATTCAAAATATATATCTTGCAGAGCTTATAAAATGCCAATTCAGAACCTACCTGAATAAGCTGCTGAAGAACATCTCGAGCACTTGTAACTTCTATCTCTTTGAGGTTCTCTACATAAACCCCTTTCTTACTGTCTTCTCTAATCTGTAACGTATTAGGCAAAAAAA

mRNA sequence

TGGCAGACGACGATTCTCATCCGAGCTCTCACTCGTAACCCAAAATCTCTGTACTGAGAGTGAGAATCAACAAATTATTTCTCCCTTCCATTTCCACTTCCAATTCCATCCATGTCTGCGCTACCTTCTACGGCCGCTCTTCACGTTCTTCCACACCTTCCATTGCTAAAATCTGAAGTTTCTCTTCTTCATTGCCGCTCTTGTACTTCAGCGGCAACCGCTTCTTCCGCCCTCTCCACTTCCGCCGCTGCTATACGCTCAATTCGCCCTCTTATCCATCCCCTTTTGCTCTTCGACACCTTCGACGCTCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTCTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGTTGTGCTGGAAATGGTGGCACAAAATGTGTTTTCTGTGACAACGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGATTGATCTTTTGCAAAAAATGTGGGGGTTCTGGATATTCTAGACGGCTTTGAACCTTCGTGTGAAAGAGCAATGTTTGATCAAGTTTCTTAACTTCAGAAAAGTGATATAAAATTTCGTTGATATAAGGAACTGCATTTCGATACCTGAAGCAGAAATGTAAGCTTGGAGTCCCTGTAAGAGCTTATAAAATGCCAATTCAGAACCTACCTGAATAAGCTGCTGAAGAACATCTCGAGCACTTGTAACTTCTATCTCTTTGAGGTTCTCTACATAAACCCCTTTCTTACTGTCTTCTCTAATCTGTAACGTATTAGGCAAAAAAA

Coding sequence (CDS)

ATGTCTGCGCTACCTTCTACGGCCGCTCTTCACGTTCTTCCACACCTTCCATTGCTAAAATCTGAAGTTTCTCTTCTTCATTGCCGCTCTTGTACTTCAGCGGCAACCGCTTCTTCCGCCCTCTCCACTTCCGCCGCTGCTATACGCTCAATTCGCCCTCTTATCCATCCCCTTTTGCTCTTCGACACCTTCGACGCTCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGTGTTTTGGTTGCCATTTCTCTCTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGTTGTGCTGGAAATGGTGGCACAAAATGTGTTTTCTGTGACAACGGTAAGATGCAGCAACAGTCAGGATTAATTGACTGCAAAGTGTGTAAAGGTGCAGGATTGATCTTTTGCAAAAAATGTGGGGGTTCTGGATATTCTAGACGGCTTTGA

Protein sequence

MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLLFDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL

Homology

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BLAST of Clc06G15300 vs. NCBI nr
Match: TYK28514.1 (protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL+CRSC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCRSCSSAATTSSTVSTSAAAIHPINPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. NCBI nr
Match: XP_008453507.1 (PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA0058156.1 protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.3e-69
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL+C SC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSAATTSSTVSTSAAAIHPINPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. NCBI nr
Match: XP_004137357.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN63893.1 hypothetical protein Csa_013817 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 6.7e-67
Identity = 133/149 (89.26%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL C SC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFCCSCSSAATTSSTVSTSAAAIHPIDPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. NCBI nr
Match: XP_038879992.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.1e-65
Identity = 132/152 (86.84%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           MSALPSTAAL  LPHLPLLK EV LL+C SC SAAT SSA+STSAA++R I PLIHP+LL
Sbjct: 1   MSALPSTAALQFLPHLPLLKPEVPLLYCCSCASAATTSSAVSTSAASMRPIGPLIHPVLL 60

Query: 61  FDTFDA---PLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120
           FD+FD+   PLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM
Sbjct: 61  FDSFDSFDTPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           QQQSGL+DCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLVDCKVCKGAGLIFCKKCGGSGYSRRL 152

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BLAST of Clc06G15300 vs. NCBI nr
Match: XP_022134916.1 (uncharacterized protein LOC111007052 [Momordica charantia])

HSP 1 Score: 251.1 bits (640), Expect = 5.8e-63
Identity = 130/152 (85.53%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAA---TASSALSTSAAAIRSIRPLIHP 60
           MSALPSTAALH+LP LPLLK E+ LL+  S  SA+   TASSA STSAAAI  I P+IHP
Sbjct: 1   MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHP 60

Query: 61  LLLFDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120
           +LLF+TFDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+PCERCAGNGGTKCVFCDNGKM
Sbjct: 61  ILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPMPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

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BLAST of Clc06G15300 vs. ExPASy Swiss-Prot
Match: A0A2K3DZC4 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-09
Identity = 35/107 (32.71%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 66  APLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD----NGKMQQQ- 125
           AP   Q  +   +V+ A+S++L+ GLK  PVPC  C G GG +C  C     N  + +  
Sbjct: 46  APETLQDIIVGGAVVGAVSVALYAGLKKDPVPCSLCQGTGGIRCFACGGDGRNATVSRDD 105

Query: 126 --------SGLI--------------DCKVCKGAGLIFCKKCGGSGY 146
                    G+               DCKVC+GAGL+ C +C G+G+
Sbjct: 106 LYDSKALGGGVAPPKRDPLGRTINPRDCKVCRGAGLVLCSQCKGTGF 152

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BLAST of Clc06G15300 vs. ExPASy TrEMBL
Match: A0A5D3DYE8 (Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001540 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.3e-70
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL+CRSC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCRSCSSAATTSSTVSTSAAAIHPINPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. ExPASy TrEMBL
Match: A0A5A7UVF5 (Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004730 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.5e-69
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL+C SC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSAATTSSTVSTSAAAIHPINPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. ExPASy TrEMBL
Match: A0A1S3BXK6 (uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494197 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.5e-69
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL+C SC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSAATTSSTVSTSAAAIHPINPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Clc06G15300 vs. ExPASy TrEMBL
Match: A0A0A0LQ07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-67
Identity = 133/149 (89.26%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAATASSALSTSAAAIRSIRPLIHPLLL 60
           M+ALPSTAALHVLPHLPLLK EV LL C SC+SAAT SS +STSAAAI  I PLIHPLLL
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLFCCSCSSAATTSSTVSTSAAAIHPIDPLIHPLLL 60

Query: 61  FDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKMQQQ 120
           FD+FDAP+DTQTFLAT SVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCD+GKMQQQ
Sbjct: 61  FDSFDAPIDTQTFLATLSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDSGKMQQQ 120

Query: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           SGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 SGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Clc06G15300 vs. ExPASy TrEMBL
Match: A0A6J1BZ42 (uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007052 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 130/152 (85.53%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MSALPSTAALHVLPHLPLLKSEVSLLHCRSCTSAA---TASSALSTSAAAIRSIRPLIHP 60
           MSALPSTAALH+LP LPLLK E+ LL+  S  SA+   TASSA STSAAAI  I P+IHP
Sbjct: 1   MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHP 60

Query: 61  LLLFDTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120
           +LLF+TFDAPLDTQTFLATFSVLVAISLSLFLGLKGGP+PCERCAGNGGTKCVFCDNGKM
Sbjct: 61  ILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPMPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

[Close]

BLAST of Clc06G15300 vs. TAIR 10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 41  LSTSAAAIRSIRPLIHPLLLF--DTFDAP---LDTQTFLATFSVLVAISLSLFLGLKGGP 100
           LS ++    S   +IHP +LF    FD     +DTQTF+ T S++VAI+LSLFLG KG P
Sbjct: 46  LSRTSVHQHSANLIIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDP 105

Query: 101 VPCERCAGNGGTKCVFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 150
           VPCERC GNGGTKCVFC  GKM+ +SG++DCKVCKG+GLIFCKKCGGSGYSRRL
Sbjct: 106 VPCERCGGNGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159

The following BLAST results are available for this feature:

BLAST of Clc06G15300 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28514.1	1.1e-69	91.28	protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa]	[more]
XP_008453507.1	9.3e-69	90.60	PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004137357.1	6.7e-67	89.26	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN63893.1 h...	[more]
XP_038879992.1	2.1e-65	86.84	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022134916.1	5.8e-63	85.53	uncharacterized protein LOC111007052 [Momordica charantia]	[more]

BLAST of Clc06G15300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A2K3DZC4	8.6e-09	32.71	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX...	[more]

BLAST of Clc06G15300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYE8	5.3e-70	91.28	Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7UVF5	4.5e-69	90.60	Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BXK6	4.5e-69	90.60	uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LQ07	3.2e-67	89.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025260 PE=4 SV=1	[more]
A0A6J1BZ42	2.8e-63	85.53	uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Clc06G15300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44020.1	1.3e-36	64.91	thylakoid lumenal P17.1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 11..149
None	No IPR available	PANTHER	PTHR15852:SF52	THYLAKOID LUMENAL P17.1 PROTEIN	coord: 11..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G15300.1	Clc06G15300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016853	isomerase activity