Clc06G14920 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G14920
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	glutaredoxin-C4-like
Location	ClcChr06: 25875779 .. 25878153 (-)
RNA-Seq Expression	Clc06G14920
Synteny	Clc06G14920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGACGGCGGTGACGATGAGGGTGAGGATGATACCGACGGTGTGCGCCATGGCTTCATCTTCCCCAGAATCACTCTTTGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAGTCCTATTGCCCGTATCTTCATTCTCCTTCTCCTTCTTTCGTTTATTTCCCTTCCAACATGCATCTATTGTTAATCTCATTCCCGCAAATCCATTTTTCGCTGTTCTGTTCCTAACCGCGAGTGGTCATGTCGTCAATTTCTTTAATATTGTTGTGTCTACGATTGGAAGCAAATCCAGGGTTGATTAATGAATCAAGGGTCATTTTCCGCTTCTTTCAATGATTAATTCGAATCGTTGAAATTTCTGGTGTTAATTATTTTTCATTGTGCAATGTAGGTATTGTGAAACGGCAAAATCTGTTTTCAAGGATTTGCACAAAGTTCCTCATGTTGTTGAGCTAGATCAAAGGGGTACTTATCTAATTTTCTTTCTTCTAGCTCTTTCCCTGATTGTGAGAAGTAACAGTAACAACTCCCTTATTTACTGTAGACTTTGGCTTGAATTTGTTGAAACTGAGTATGCTTGTTTCTTGCTTTCTCTGAGCTCTTTCCTCCATTTCATGTCTCTGTTCTGTCTATATTCCAGTCAATTTTATATGAAAATCTTGTTCTGGCTTATTCACTCTACACCATGAATGTGATATTACAGTTGATATGTGTATACTTGGGATTTTTGAAGCTCAAGTGTGTGTTAACTAGATGGCTTACCTTTCTCTTTAGTTATCCATTTGCTTCAGCTGCTTCACTTCTCCTTCCATTTTTTGTTATTTGCTGATTCAGCGTCATTATTCAAAGGAACTATCTAGTTAAAATGATTGAAACACAAACTTTAGAGAAACTTAGAAACAAGAACAACAAAACTGTAACAGAGTAAGAGAATCTGTTTTAGTCTTGTCTCCGACTCTCCAACCTCTCACAATTATGATTACTTGCAACTGCTCTTGTGACATGATCCTTTGTTAAGTGCTTTGGCAATTCGAAACTAAAAGTTTTGTTTTGGTACCTTCTACCCTCTTTGGCTAAAATTCTCTTTCCAATGTGGGACTCTCAGATGGTGTCTTTTTAGATTCACCATTCTTTGGTCATTCTTTTTTATTGAATATCTGTTTGAGCTTCATGGTCTTGGTCTTTGATAGTATATGGGTTTCATCTCAAAATCAATTAATAGTGAGAGAAGTAATTCATGTATCTTATTAAGATCTTAAAATCACTTCATCTTTTTAATGTGAAATTCTCGAGAAGGAAAAGGAGTCAAAAAGTGGGAGATGGTGGAGGAGAAGTATAACCGATTAATGTTGCTTGGTGTTGATGTGCAAATATTAGCAAGGAAGATTCACCACTTGTACATGTGATAAAATTTTCAATTCAGGAAACGAGGTGACCTGCAAAATAGAATGAACTGCACACCGTCACTGATGCCTAAGTTAGTTTAGTGGATTTAGGATGTAGTAAGAGTTTAGATAGTAAGAGTTAACTTACCCCTTCAATATATATCTAAGATGACTTAGGATTTTTCCTCTTCTCCTCAGATTAGGATGACCTGGGTTAGCCTCTTCGCGCCAGGTAAATCCCACAATGTGGATAAAAAAGTTCCACGTCCTTGGGCCAACAAGCTCCCCTTGGCCTTGGTTGAGGCGAGCCCACGGGCACTTTGGCCCATGGTCTGTCTGCCTTTTTAGGTCTTGGGCTTGGTTTTGTCCATTTTGGTCCAATTAGTGTTGACTTTAGCTTTTTTTATTTTGAGCCCAAATTCAACAATAACACTTAAAATATTTTGTTAGTGAGAAATCTTCATTTATCTTTTCATATTTTGTATGCAGGTTCTTTGTCTTCTTTAATTAGTTTTTTTCTTTCTTTCTTTTTCCTTTAATATCAGGGTGGGGAGAGAGTTCAAGCTTTGGATGAATTCCCTAAATGAACTGGCAAAACTGTTACCATTAGACATATATACCCTAGCTCTTGTTTCCATTTCTATTTATATCCTAGTGTTATCTCCATGCTGTTCTACTAACTCATAACTGAAAAGTTAGTTAATTCATGGAATTCGGATCTTTATCCCCCAGATGATGGCAGTGCTATTCAGGATGCTCTAAGTGCACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGGTAATTGGCTCTTCTCTGGTAACTTACTGTTTGTATTATAATTTTCTCCAAAGTACTTCTAACTCATTGAGACCTTGATTTTCAGATACTGTGGAAGCATATGAGAGTGGAGAGTTGGGTAAACTTCTGGGTATTAAGGATTAG

mRNA sequence

atggcagcgacggcggtgacgatgagggtgaggatgataccgacggtgtgcgccatggcttcatcttccccagaatcactctttgtcaagaaaaccatcgcctcccaccagaccgtcatcttctccaagtcctattgcccgtattgtgaaacggcaaaatctgttttcaaggatttgcacaaagttcctcatgttgttgagctagatcaaaggggtacttatctaattttctttcttctagctctttccctgattattaggatgacctgggttagcctcttcgcgccaggtaaatcccacaatgtggataaaaaagttccacgtccttgggccaacaagctccccttggccttggttgaggcgagcccacgggcactttggcccatggtctatgatggcagtgctattcaggatgctctaagtgcacttgttggaaggcacactgtacctcaagtgttcatagatggaaaacacataggtggatcagatgatactgtggaagcatatgagagtggagagttgggtaaacttctgggtattaaggattag

Coding sequence (CDS)

ATGGCAGCGACGGCGGTGACGATGAGGGTGAGGATGATACCGACGGTGTGCGCCATGGCTTCATCTTCCCCAGAATCACTCTTTGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAGTCCTATTGCCCGTATTGTGAAACGGCAAAATCTGTTTTCAAGGATTTGCACAAAGTTCCTCATGTTGTTGAGCTAGATCAAAGGGGTACTTATCTAATTTTCTTTCTTCTAGCTCTTTCCCTGATTATTAGGATGACCTGGGTTAGCCTCTTCGCGCCAGGTAAATCCCACAATGTGGATAAAAAAGTTCCACGTCCTTGGGCCAACAAGCTCCCCTTGGCCTTGGTTGAGGCGAGCCCACGGGCACTTTGGCCCATGGTCTATGATGGCAGTGCTATTCAGGATGCTCTAAGTGCACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGATACTGTGGAAGCATATGAGAGTGGAGAGTTGGGTAAACTTCTGGGTATTAAGGATTAG

Protein sequence

MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKD

Homology

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BLAST of Clc06G14920 vs. NCBI nr
Match: XP_004146345.1 (glutaredoxin-C4 [Cucumis sativus] >KGN65503.1 hypothetical protein Csa_019622 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47
Identity = 115/182 (63.19%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAAT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+
Sbjct: 1   MAATVVTMRMRMIPTVRAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKTVFKDLN 60

Query: 61  KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVE 120
           KVPHVVELDQR                                                 
Sbjct: 61  KVPHVVELDQRD------------------------------------------------ 120

Query: 121 ASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 180
                      DGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI
Sbjct: 121 -----------DGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 123

Query: 181 KD 183
           ++
Sbjct: 181 EE 123

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BLAST of Clc06G14920 vs. NCBI nr
Match: XP_008453541.1 (PREDICTED: glutaredoxin-C4-like [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-46
Identity = 113/182 (62.09%), Postives = 119/182 (65.38%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAAT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+
Sbjct: 1   MAATVVTMRMRMIPTVRAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLN 60

Query: 61  KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVE 120
           KVPHVVELDQR                                                 
Sbjct: 61  KVPHVVELDQRD------------------------------------------------ 120

Query: 121 ASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 180
                      DGSAIQDALSALVGRH+VPQVFIDGKHIGGSDDTVEAYESGEL KLLGI
Sbjct: 121 -----------DGSAIQDALSALVGRHSVPQVFIDGKHIGGSDDTVEAYESGELSKLLGI 123

Query: 181 KD 183
           ++
Sbjct: 181 EE 123

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BLAST of Clc06G14920 vs. NCBI nr
Match: XP_038880247.1 (glutaredoxin-C4-like [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-42
Identity = 104/182 (57.14%), Postives = 114/182 (62.64%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAAT VT+++RMIPTV AMASSSPES FVKKTIASHQTVIFSKSYC YCE AK+VFKDLH
Sbjct: 1   MAATVVTLKMRMIPTVYAMASSSPESYFVKKTIASHQTVIFSKSYCAYCEAAKAVFKDLH 60

Query: 61  KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVE 120
           KVP+VVELDQR                                                 
Sbjct: 61  KVPYVVELDQRD------------------------------------------------ 120

Query: 121 ASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 180
                      DGSAIQDALSA VGRHTVPQV IDGK+I GSDD++EAY+SGELGKLLGI
Sbjct: 121 -----------DGSAIQDALSAFVGRHTVPQVLIDGKYISGSDDSIEAYKSGELGKLLGI 123

Query: 181 KD 183
           K+
Sbjct: 181 KE 123

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BLAST of Clc06G14920 vs. NCBI nr
Match: XP_022921333.1 (glutaredoxin-C4-like [Cucurbita moschata] >XP_022987348.1 glutaredoxin-C4-like [Cucurbita maxima] >XP_023515442.1 glutaredoxin-C4-like [Cucurbita pepo subsp. pepo] >KAG6589673.1 Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.9 bits (442), Expect = 6.5e-40
Identity = 106/184 (57.61%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPT--VCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKD 60
           MAAT       M+    V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAK+VFKD
Sbjct: 1   MAATLSMRMTTMVSAARVYAMASSSPESLFVKKTIASHQSVIFSKSYCPYCETAKAVFKD 60

Query: 61  LHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLAL 120
           L+KVPHVVELDQR                                               
Sbjct: 61  LNKVPHVVELDQRD---------------------------------------------- 120

Query: 121 VEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 180
                        DGSAIQDALSALVGR TVPQVFIDGKHIGGSDDTVEAYESGELGKLL
Sbjct: 121 -------------DGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 125

Query: 181 GIKD 183
           GIK+
Sbjct: 181 GIKE 125

[Close]

BLAST of Clc06G14920 vs. NCBI nr
Match: XP_022135442.1 (glutaredoxin-C4 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 5.9e-33
Identity = 95/190 (50.00%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 5   AVTMRVRMIPTV-----CAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETA 64
           A T+ VR + TV     CAM       ASSSPESLFVKKTIASHQ VIFSKSYCPYC  A
Sbjct: 2   AATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRA 61

Query: 65  KSVFKDLHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWAN 124
           K+VF++L KVPHVVELD+R                                         
Sbjct: 62  KAVFEELKKVPHVVELDRRD---------------------------------------- 121

Query: 125 KLPLALVEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESG 183
                              DG  IQDA+  LVGRHTVPQVFIDGKHIGGSDDTV AYESG
Sbjct: 122 -------------------DGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESG 132

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BLAST of Clc06G14920 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 75/166 (45.18%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 15  TVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTY 74
           ++ + A+SSPE+ FVKKTI+SH+ VIFSKSYCPYC+ AKSVF++L +VP+VVELD+R   
Sbjct: 21  SMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDER--- 80

Query: 75  LIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGS 134
                                                                    DG 
Sbjct: 81  --------------------------------------------------------EDGW 127

Query: 135 AIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 181
           +IQ AL  +VGR TVPQVFI+GKH+GGSDDTV+AYESGEL KLLG+
Sbjct: 141 SIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGV 127

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BLAST of Clc06G14920 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 75/182 (41.21%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAA A+   + +     A + ++ +S FVK T+ +H  VIFSKSYCPYC  AK+VFK+L 
Sbjct: 11  MAAAAL---IALAALGSAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELE 70

Query: 61  --KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLAL 120
             K P+VVELDQR                                               
Sbjct: 71  LKKEPYVVELDQR----------------------------------------------- 130

Query: 121 VEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 180
                        DG  IQDALS +VGR TVPQVF+ GKH+GGSDDTVEAYESG+L KLL
Sbjct: 131 ------------EDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 130

[Close]

BLAST of Clc06G14920 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-18
Identity = 59/162 (36.42%), Postives = 76/162 (46.91%), Query Frame = 0


Query: 18  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTYLIF 77
           A A+ SP S FV+  I S++  IFSK+YCPY   AK +F+DL + P++VELD R      
Sbjct: 24  AAATRSP-SAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLR------ 83

Query: 78  FLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGSAIQ 137
                                                                 DG  IQ
Sbjct: 84  -----------------------------------------------------EDGREIQ 125

Query: 138 DALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLG 180
             L  LVGRHTVPQVF++G+H+GGSDDT  A+ +G+L KLLG
Sbjct: 144 SVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLG 125

[Close]

BLAST of Clc06G14920 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-17
Identity = 58/153 (37.91%), Postives = 67/153 (43.79%), Query Frame = 0


Query: 26  SLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTYLIFFLLALSLI 85
           S FV+  I S++ VIFSKSYCPYC  +K +F  L + P VVELDQR              
Sbjct: 34  SAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQR-------------- 93

Query: 86  IRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGSAIQDALSALVG 145
                                                         DG  IQ  L   VG
Sbjct: 94  ---------------------------------------------EDGDQIQYELLEFVG 127

Query: 146 RHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 179
           R TVPQVF++GKHIGGSDD   A ESG+L KLL
Sbjct: 154 RRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 127

[Close]

BLAST of Clc06G14920 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-13
Identity = 53/170 (31.18%), Postives = 69/170 (40.59%), Query Frame = 0


Query: 20  ASSSPESLF-------VKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRG 79
           +SSSP+S F       VK+T+A +  VI+SKS+C Y    K++FK +   PHV+ELDQ G
Sbjct: 47  SSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHVIELDQLG 106

Query: 80  TYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYD 139
                                                                       
Sbjct: 107 A----------------------------------------------------------Q 158

Query: 140 GSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGIKD 183
           G  +Q  L  L G+ TVP VFI GKHIGG  DTV+ +  GEL  +L   D
Sbjct: 167 GPQLQKVLERLTGQSTVPNVFIGGKHIGGCTDTVKLHRKGELATMLSELD 158

[Close]

BLAST of Clc06G14920 vs. ExPASy TrEMBL
Match: A0A0A0LUU4 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427530 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.0e-48
Identity = 115/182 (63.19%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAAT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+
Sbjct: 1   MAATVVTMRMRMIPTVRAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKTVFKDLN 60

Query: 61  KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVE 120
           KVPHVVELDQR                                                 
Sbjct: 61  KVPHVVELDQRD------------------------------------------------ 120

Query: 121 ASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 180
                      DGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI
Sbjct: 121 -----------DGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 123

Query: 181 KD 183
           ++
Sbjct: 181 EE 123

[Close]

BLAST of Clc06G14920 vs. ExPASy TrEMBL
Match: A0A1S3BVX6 (glutaredoxin-C4-like OS=Cucumis melo OX=3656 GN=LOC103494224 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.0e-46
Identity = 113/182 (62.09%), Postives = 119/182 (65.38%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLH 60
           MAAT VTMR+RMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK+VFKDL+
Sbjct: 1   MAATVVTMRMRMIPTVRAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLN 60

Query: 61  KVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVE 120
           KVPHVVELDQR                                                 
Sbjct: 61  KVPHVVELDQRD------------------------------------------------ 120

Query: 121 ASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 180
                      DGSAIQDALSALVGRH+VPQVFIDGKHIGGSDDTVEAYESGEL KLLGI
Sbjct: 121 -----------DGSAIQDALSALVGRHSVPQVFIDGKHIGGSDDTVEAYESGELSKLLGI 123

Query: 181 KD 183
           ++
Sbjct: 181 EE 123

[Close]

BLAST of Clc06G14920 vs. ExPASy TrEMBL
Match: A0A6J1JJ74 (glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484928 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40
Identity = 106/184 (57.61%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPT--VCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKD 60
           MAAT       M+    V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAK+VFKD
Sbjct: 1   MAATLSMRMTTMVSAARVYAMASSSPESLFVKKTIASHQSVIFSKSYCPYCETAKAVFKD 60

Query: 61  LHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLAL 120
           L+KVPHVVELDQR                                               
Sbjct: 61  LNKVPHVVELDQRD---------------------------------------------- 120

Query: 121 VEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 180
                        DGSAIQDALSALVGR TVPQVFIDGKHIGGSDDTVEAYESGELGKLL
Sbjct: 121 -------------DGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 125

Query: 181 GIKD 183
           GIK+
Sbjct: 181 GIKE 125

[Close]

BLAST of Clc06G14920 vs. ExPASy TrEMBL
Match: A0A6J1E3M7 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429637 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40
Identity = 106/184 (57.61%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MAATAVTMRVRMIPT--VCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKD 60
           MAAT       M+    V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAK+VFKD
Sbjct: 1   MAATLSMRMTTMVSAARVYAMASSSPESLFVKKTIASHQSVIFSKSYCPYCETAKAVFKD 60

Query: 61  LHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLAL 120
           L+KVPHVVELDQR                                               
Sbjct: 61  LNKVPHVVELDQRD---------------------------------------------- 120

Query: 121 VEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 180
                        DGSAIQDALSALVGR TVPQVFIDGKHIGGSDDTVEAYESGELGKLL
Sbjct: 121 -------------DGSAIQDALSALVGRRTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 125

Query: 181 GIKD 183
           GIK+
Sbjct: 181 GIKE 125

[Close]

BLAST of Clc06G14920 vs. ExPASy TrEMBL
Match: A0A6J1C2Q1 (glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.8e-33
Identity = 95/190 (50.00%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 5   AVTMRVRMIPTV-----CAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETA 64
           A T+ VR + TV     CAM       ASSSPESLFVKKTIASHQ VIFSKSYCPYC  A
Sbjct: 2   AATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRA 61

Query: 65  KSVFKDLHKVPHVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWAN 124
           K+VF++L KVPHVVELD+R                                         
Sbjct: 62  KAVFEELKKVPHVVELDRRD---------------------------------------- 121

Query: 125 KLPLALVEASPRALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESG 183
                              DG  IQDA+  LVGRHTVPQVFIDGKHIGGSDDTV AYESG
Sbjct: 122 -------------------DGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESG 132

[Close]

BLAST of Clc06G14920 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 75/166 (45.18%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 15  TVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTY 74
           ++ + A+SSPE+ FVKKTI+SH+ VIFSKSYCPYC+ AKSVF++L +VP+VVELD+R   
Sbjct: 21  SMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDER--- 80

Query: 75  LIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGS 134
                                                                    DG 
Sbjct: 81  --------------------------------------------------------EDGW 127

Query: 135 AIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLLGI 181
           +IQ AL  +VGR TVPQVFI+GKH+GGSDDTV+AYESGEL KLLG+
Sbjct: 141 SIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLGV 127

[Close]

BLAST of Clc06G14920 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-18
Identity = 58/153 (37.91%), Postives = 67/153 (43.79%), Query Frame = 0


Query: 26  SLFVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHVVELDQRGTYLIFFLLALSLI 85
           S FV+  I S++ VIFSKSYCPYC  +K +F  L + P VVELDQR              
Sbjct: 34  SAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQR-------------- 93

Query: 86  IRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRALWPMVYDGSAIQDALSALVG 145
                                                         DG  IQ  L   VG
Sbjct: 94  ---------------------------------------------EDGDQIQYELLEFVG 127

Query: 146 RHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 179
           R TVPQVF++GKHIGGSDD   A ESG+L KLL
Sbjct: 154 RRTVPQVFVNGKHIGGSDDLGAALESGQLQKLL 127

[Close]

BLAST of Clc06G14920 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 9.1e-16
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 8   MRVRMIPTVCAMASSSPESL--FVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHV 67
           +R   +  + + +SSS  +L   VK T+A +  V++SK++C Y    KS+FK L   P V
Sbjct: 55  LRCSSVKAMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLV 114

Query: 68  VELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVD-KKVPRPWANKLPLALVEASPR 127
           VELDQ                    VSL      H++  K + + W              
Sbjct: 115 VELDQ-------------------LVSLGKTSLPHDIGLKHLQKFW-------------- 174

Query: 128 ALWPMVY---DGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 179
             W + +   +GS +Q+ L  + G++TVP VFI GKHIGG  DT++ +  GEL  +L
Sbjct: 175 --WFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 196

[Close]

BLAST of Clc06G14920 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 50/173 (28.90%), Postives = 74/173 (42.77%), Query Frame = 0


Query: 8   MRVRMIPTVCAMASSSPESL--FVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVPHV 67
           +R   +  + + +SSS  +L   VK T+A +  V++SK++C Y    KS+FK L   P V
Sbjct: 55  LRCSSVKAMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLV 114

Query: 68  VELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASPRA 127
           VELDQ G+                                                    
Sbjct: 115 VELDQLGS---------------------------------------------------- 169

Query: 128 LWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 179
                 +GS +Q+ L  + G++TVP VFI GKHIGG  DT++ +  GEL  +L
Sbjct: 175 ------EGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169

[Close]

BLAST of Clc06G14920 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12
Identity = 51/175 (29.14%), Postives = 69/175 (39.43%), Query Frame = 0


Query: 10  VRMIPTVCAMASSSPESL------FVKKTIASHQTVIFSKSYCPYCETAKSVFKDLHKVP 69
           VR + +  + ASSS  S        ++KT+  +  VI+SK++C YC   K++FK L   P
Sbjct: 48  VRAMTSSSSAASSSSSSFGSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQP 107

Query: 70  HVVELDQRGTYLIFFLLALSLIIRMTWVSLFAPGKSHNVDKKVPRPWANKLPLALVEASP 129
            VVELDQ G                                                   
Sbjct: 108 LVVELDQLGP-------------------------------------------------- 164

Query: 130 RALWPMVYDGSAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL 179
                    G  +Q  L  L G+HTVP VF+ GKHIGG  DTV+    G+L  +L
Sbjct: 168 --------QGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELML 164

The following BLAST results are available for this feature:

BLAST of Clc06G14920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146345.1	1.4e-47	63.19	glutaredoxin-C4 [Cucumis sativus] >KGN65503.1 hypothetical protein Csa_019622 [C...	[more]
XP_008453541.1	2.1e-46	62.09	PREDICTED: glutaredoxin-C4-like [Cucumis melo]	[more]
XP_038880247.1	6.9e-42	57.14	glutaredoxin-C4-like [Benincasa hispida]	[more]
XP_022921333.1	6.5e-40	57.61	glutaredoxin-C4-like [Cucurbita moschata] >XP_022987348.1 glutaredoxin-C4-like [...	[more]
XP_022135442.1	5.9e-33	50.00	glutaredoxin-C4 [Momordica charantia]	[more]

BLAST of Clc06G14920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	1.4e-29	45.18	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	1.4e-24	41.21	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q6H628	3.3e-18	36.42	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q9FVX1	6.1e-17	37.91	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q0J3L4	3.1e-13	31.18	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]

BLAST of Clc06G14920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUU4	7.0e-48	63.19	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42753...	[more]
A0A1S3BVX6	1.0e-46	62.09	glutaredoxin-C4-like OS=Cucumis melo OX=3656 GN=LOC103494224 PE=3 SV=1	[more]
A0A6J1JJ74	3.1e-40	57.61	glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484928 PE=3 SV=1	[more]
A0A6J1E3M7	3.1e-40	57.61	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429637 PE=3 SV=1	[more]
A0A6J1C2Q1	2.8e-33	50.00	glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1	[more]

BLAST of Clc06G14920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	1.0e-30	45.18	Glutaredoxin family protein	[more]
AT1G77370.1	4.4e-18	37.91	Glutaredoxin family protein	[more]
AT2G20270.2	9.1e-16	31.64	Thioredoxin superfamily protein	[more]
AT2G20270.1	1.5e-13	28.90	Thioredoxin superfamily protein	[more]
AT4G28730.1	4.7e-12	29.14	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 18..179 e-value: 4.3E-31 score: 108.9
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 16..71 coord: 132..173
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 132..173 coord: 16..71
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 26..182 score: 14.43203
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 39..177 e-value: 2.16413E-33 score: 111.863
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 39..71 e-value: 4.7E-6 score: 26.7 coord: 134..159 e-value: 4.6E-6 score: 26.8
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 40..55
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 28..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G14920.2	Clc06G14920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070887	cellular response to chemical stimulus
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity