Clc06G14500 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G14500
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	myb-related transcription factor, partner of profilin-like
Location	ClcChr06: 25402028 .. 25405577 (-)
RNA-Seq Expression	Clc06G14500
Synteny	Clc06G14500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATCAATAGCGAATCTACGCCGCCTCCTTTGATCGGAAAAATTGGCCCCTATACCGTCTTCATGACCCCACCGGCCACTCCTTCGCCGGTCTCTCAGCCTCAGCCGGTCTTTGAGTCTCCTAAGAAGGTCATTCAGCCACCTCCGGTTCAGCCTCCGCCTCACCAGTTCGATAAGTCGGTTTCTGTTGCTGCTTCCCCTAATGGGAATGCATCCGTCTCTGGTTTCTTTAGAAATGCGGTCTCTAAAGTGCAGAATGGTAATTCTTATGATGCGATGTCCTGTTCTGCAAAATGGTTTTCTGCTTTGAGTTCTTTCTTTGAATTTAATGCTGGGATATTGGGGCTTCAGGAAACAGATGCGAGACTGGGTTTCTATTTTTCTGTTTTTTCTGATAGTGGTAGAGAAAAATCTATCTGGGGAAACTGATGAGTTCGAAAATTATGGAACTCCATGATTTTATTCTGTGTAGCTATACAGGGGGTTCAGCATTGTTTTAGCCCTATTGATTGATGTGTAATTAGACCAGGATTCTTATGGAATAGTCATATTTTTTCTTATTCTTTTTTCCTTTGTTGCCATTATTACTAATTAGGGGAGACATGTTTGTGAATGTTAGTTCCCTCCCTGTATTATCTTGTGAATTTCCTCTGCCATATCTTGTTCTTCTATATTTCATACTTTCTTCATTTTTTTTGTTTGGAAATTTTTGTATTTGATACTTTAAAGTTGTTTTTCTTGTAAAATTTGATGGAGGATCTCGTTTGTTTAAGCTCCACTTTAGCTTGTGCTAAATGTGTGCTAATTTGTTTGTAAGAATTCTGTTGTTGTTTGGGAAATTGGGGGAAGAAGATAACAAGAAACTGAAGAAAATTAGTGGTGAAACTTTGCGTCATAATACAAATATTTTCTGCCATGGTGTTTTTTTTTTCATATAAAAATTATCAACACATAAAGGTTTTGGTGCTATTTTGCAGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTGAATCAATCTAAGTACCAGTGGGCACTAGATGATTATTACGAGAGCAAGGGAATGGTATGCATCTGGTCAAATTTATTAGTAGTACAATAACATATTCTTGTGTATTGTTTTCTGAAATTTGGTGTTATTATTTGTCCTTAATCTTGACATTTATTGTCCATTTCACTATCCTTTCTCATCCATAGCCTATGATTTTAGCCTATTCATAATTGAAATAATAATAGTTATTGATTGAAACTGCATACATGAAGTAACATTGAAGCAAAATTGCACTACTTATATATGAAGTAACTTTGAAGTCAAGCGTCTCTCTAACTTGTTCTACTTTTCCATTTAGTATCTCATTTATTTTCATTGAATGCATAGGGTTAACTAGTGGAACTTTTCTTCTTTCCATACTTGTTTGTCTGAGAAAGATAAGTAGGATGAAGAGGCTAACTGTGTTTCAAATGTGTGGTCGAAGTTAACCTGTATGTTTCTATTGAGTAAAGGGAAACAATAAGATGGACATTTCTTGCTTGCCTTTGATAAATGATATAATTTGGACATGAATAAGAAACAAGCAATTAAATACATGAGATGGTTATCCTTCAAGATTAAGTCTTCTCTTCAGTTATTTAATGTTTTTCTATATGTAGTTATAATGTCATCATTGATATACCTGCAAAGTATCCTTTCTCTATTTGGAATAGCAGGAACTATACTTGCTTTACCTAAGATATTATTTACATAAATGATTGCCAAATGTGAAAAAGATATTATATAAATGCATGAATTGTAGCTTCCCCCCTTGGTTAGATTTTATACTTATACCTAAGCTTTTACTCTGACTTCCCTGCTCGATAATGTAGAAAATCTCAATAAACCTTCAAAGCTTGTGCTACACAATTCCAAAACTCAATAAACCATTTATTGTATAGTTAGTCATGGGTCTGGGCATTTTCTTCTGTTCAGTTGTCTAGTTTGTCCTTCTGCATTCTTTCATATTATCTCTCTCAGGTTTTCTGATTAAAAAAATCTCAAAAAGTCATTATGTTTTCAATCCTTAAATAATTGGACACATTCATACACAACCCCAAACCTGTCTTAAATTGAACTTCCAACTTATGGTAGTTTGGTAGAAAGGTTGACTCAATTTTCTTTTTCAATAAGGAAACAACTATCATTGAGAACAAATGAAAGAAGAACTAAAAGGGCATTGAAAAAAACAGGCACAGCGAAGCGAAATGCCCCTAACCCAAAAAACTATACAAAAGAGGGGTCCAATCTAAAAGGGTCAAACTAAGAGAATGATCACAAAAAGCCTTAGTTAGTGACACTCAAAGAAAGATGTTTAATGCAACAAGGATTATACCTTCTCAAGATTTCTTAAGCTCCCAAAAAATTGTCTTGTTTCTCTTCAACCACAACCCTCAAATAACAGCGATAAAGGAAAACTGCCACAGGATTCACCCTTTAACTTGAGACCATCTGTCAGAAATTGTTGAAGCAACATGTTTTAGTTTCCATGAACGATTGGTGCATTCACAATTAGAGTGAGAAACCATGGTGTCACTGGGCTAGAACTTAGAATCCTACAAGCTTCCTTTATAACCAAATTTAGTAGGGTGAGATGGTTGTCCTTTAGATTTGTCAAGGTCTGTACAAGTTGGCATGGACACTTTTGTTGAAGCAAGTTGACATGGAAACATGTGCACAAGTTGACATGGAAACATAAAGAGTTATATAAGCAGTTTGGGAAACATGATGAAATTGACCAATTTGAATAAAAAATTCGAATATTTTCCATCAGTGAACAATTCTGACAGATTATACTTTCCATGCTAGAATTTTTCAAGTTACTTCAATACGTAGTCTTTTAGTAATAAATGAAGCAATTTTTGATTTGAGTGATTAACAAAATCAAATTCAACTTTAAATGCATTTATTTTATATCAAATTCAACTTCTTATGTCATATATGTTTGTATATAAGATCTGAATTTTAACACTTTTCTCTTACTGCAGGAAAATGGGGACATGAAAGCAAAGGAACTGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAAATTTGTTACATTATGTGCATAGCCAAGCCCCTCACTAACTTCTTCGTGCCAACATGTTTGGTTTTGTTTTGTTTTGATATCACCTTTTGTATGCTTTCAGAATCAAACTTGTTATATGTTTGTAGGAACTACCCATCTTTGGACAATAGAGGAACTATTTATACCTAATCTATGCAATGGCTGAAGTGGACTGATTGTTTATACAATGCTGATGAAGTCGCCAGCCATCTTGGAATGTGAATTCCATCTACCTTACACAGAAATCGACAGAATTTGGTCGCGTCGTAGTTGTAAGCTATGTAATGTTATGTACTGTTGTCGTCTTCTTTTTCCCCCTCATTGATCTCTTTTTTGTTCTTTTGAAGCTGAACCTTTGGCTTATGTATTTTGAGCTACCTTTTTGGTTTATTTGTGCCATTATAATGAAGGTAATGTTTGAAGGCAATGTTTGGTTC

mRNA sequence

ATGCCCATCAATAGCGAATCTACGCCGCCTCCTTTGATCGGAAAAATTGGCCCCTATACCGTCTTCATGACCCCACCGGCCACTCCTTCGCCGGTCTCTCAGCCTCAGCCGGTCTTTGAGTCTCCTAAGAAGGTCATTCAGCCACCTCCGGTTCAGCCTCCGCCTCACCAGTTCGATAAGTCGGTTTCTGTTGCTGCTTCCCCTAATGGGAATGCATCCGTCTCTGGTTTCTTTAGAAATGCGGTCTCTAAAGTGCAGAATGGTAATTCTTATGATGCGATGTCCTGTTCTGCAAAATGGTTTTCTGCTTTGAGTTCTTTCTTTGAATTTAATGCTGGGATATTGGGGCTTCAGGAAACAGATGCGAGACTGGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTGAATCAATCTAAGTACCAGTGGGCACTAGATGATTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCAAAGGAACTGTCGAGCAAAGCCCAGAGCGTGTAACAGGAACTACCCATCTTTGGACAATAGAGGAACTATTTATACCTAATCTATGCAATGGCTGAAGTGGACTGATTGTTTATACAATGCTGATGAAGTCGCCAGCCATCTTGGAATGTGAATTCCATCTACCTTACACAGAAATCGACAGAATTTGGTCGCGTCGTAGTTGTAAGCTATGTAATGTTATGTACTGTTGTCGTCTTCTTTTTCCCCCTCATTGATCTCTTTTTTGTTCTTTTGAAGCTGAACCTTTGGCTTATGTATTTTGAGCTACCTTTTTGGTTTATTTGTGCCATTATAATGAAGGTAATGTTTGAAGGCAATGTTTGGTTC

Coding sequence (CDS)

ATGCCCATCAATAGCGAATCTACGCCGCCTCCTTTGATCGGAAAAATTGGCCCCTATACCGTCTTCATGACCCCACCGGCCACTCCTTCGCCGGTCTCTCAGCCTCAGCCGGTCTTTGAGTCTCCTAAGAAGGTCATTCAGCCACCTCCGGTTCAGCCTCCGCCTCACCAGTTCGATAAGTCGGTTTCTGTTGCTGCTTCCCCTAATGGGAATGCATCCGTCTCTGGTTTCTTTAGAAATGCGGTCTCTAAAGTGCAGAATGGTAATTCTTATGATGCGATGTCCTGTTCTGCAAAATGGTTTTCTGCTTTGAGTTCTTTCTTTGAATTTAATGCTGGGATATTGGGGCTTCAGGAAACAGATGCGAGACTGGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTGAATCAATCTAAGTACCAGTGGGCACTAGATGATTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCAAAGGAACTGTCGAGCAAAGCCCAGAGCGTGTAA

Protein sequence

MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDKSVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQETDARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV

Homology

[Close]

BLAST of Clc06G14500 vs. NCBI nr
Match: XP_038878417.1 (uncharacterized protein LOC120070657 [Benincasa hispida] >XP_038878418.1 uncharacterized protein LOC120070657 [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 9.8e-62
Identity = 135/174 (77.59%), Postives = 135/174 (77.59%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPPATPSP SQPQPVFESPKKVIQPPPVQPPPHQFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPASQPQPVFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVSVAASPNGNASVSGFFRNAVSKVQN                                 
Sbjct: 61  SVSVAASPNGNASVSGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKE SSKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. NCBI nr
Match: XP_008453592.1 (PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 7.8e-59
Identity = 130/174 (74.71%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVFESPKKVIQPPPVQPPPHQFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPVFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVS+AA PNGNASVSGFFRNAVSKVQN                                 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHS LDDHLARWFGLNQSKYQWALDDYYESKGME GDMKAKE SSKAQSV
Sbjct: 121 ----AHSRLDDHLARWFGLNQSKYQWALDDYYESKGMETGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. NCBI nr
Match: XP_004146326.1 (uncharacterized protein LOC101221556 [Cucumis sativus] >XP_011656891.1 uncharacterized protein LOC101221556 [Cucumis sativus] >KGN65468.1 hypothetical protein Csa_020093 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-58
Identity = 129/174 (74.14%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQP+FESPKKVIQPPPVQPPPHQFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVS+AA PNGNASVSGFFRNAVSKVQN                                 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGME GDMKAKE  SKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMETGDMKAKEPPSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. NCBI nr
Match: XP_023530480.1 (uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530481.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530482.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.1 bits (588), Expect = 7.3e-57
Identity = 127/174 (72.99%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSP S PQPVFESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVSVA   NGNASV+GFFRNAVSKVQN                                 
Sbjct: 61  SVSVAGVGNGNASVAGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKE SSKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. NCBI nr
Match: XP_022930193.1 (myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930194.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930196.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_023007095.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007098.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007106.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima])

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-56
Identity = 126/174 (72.41%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSP S PQPVFESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVSV    NGNASV+GFFRNAVSKVQN                                 
Sbjct: 61  SVSVDTVANGNASVAGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKE SSKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. ExPASy TrEMBL
Match: A0A1S3BXF0 (uncharacterized protein LOC103494256 OS=Cucumis melo OX=3656 GN=LOC103494256 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.8e-59
Identity = 130/174 (74.71%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVFESPKKVIQPPPVQPPPHQFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPVFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVS+AA PNGNASVSGFFRNAVSKVQN                                 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHS LDDHLARWFGLNQSKYQWALDDYYESKGME GDMKAKE SSKAQSV
Sbjct: 121 ----AHSRLDDHLARWFGLNQSKYQWALDDYYESKGMETGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. ExPASy TrEMBL
Match: A0A0A0LUN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423260 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.4e-59
Identity = 129/174 (74.14%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQP+FESPKKVIQPPPVQPPPHQFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVS+AA PNGNASVSGFFRNAVSKVQN                                 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGME GDMKAKE  SKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMETGDMKAKEPPSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. ExPASy TrEMBL
Match: A0A6J1KZL1 (myb-related transcription factor, partner of profilin-like OS=Cucurbita maxima OX=3661 GN=LOC111499689 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 126/174 (72.41%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSP S PQPVFESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVSV    NGNASV+GFFRNAVSKVQN                                 
Sbjct: 61  SVSVDTVANGNASVAGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKE SSKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. ExPASy TrEMBL
Match: A0A6J1EQV9 (myb-related transcription factor, partner of profilin-like OS=Cucurbita moschata OX=3662 GN=LOC111436698 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 126/174 (72.41%), Postives = 129/174 (74.14%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSP S PQPVFESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SVSV    NGNASV+GFFRNAVSKVQN                                 
Sbjct: 61  SVSVDTVANGNASVAGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKE SSKAQSV
Sbjct: 121 ----AHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 137

[Close]

BLAST of Clc06G14500 vs. ExPASy TrEMBL
Match: A0A6J1E0H4 (branchpoint-bridging protein-like OS=Cucurbita moschata OX=3662 GN=LOC111429721 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.4e-53
Identity = 122/174 (70.11%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFDK 60
           MPINSESTPPPLIGKIGPYTVFMTPPATPSP SQP PVFESPKKVIQPPPVQPPP Q+DK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPATPSPASQPPPVFESPKKVIQPPPVQPPPQQYDK 60

Query: 61  SVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQET 120
           SV     PNGNASV+GFFRNAVSKVQN                                 
Sbjct: 61  SV-----PNGNASVAGFFRNAVSKVQN--------------------------------- 120

Query: 121 DARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
               AHSSLDDHLARW GLNQSKYQWALDDYYESKG+ENGD+KAKE  SKAQSV
Sbjct: 121 ----AHSSLDDHLARWLGLNQSKYQWALDDYYESKGLENGDIKAKEQLSKAQSV 132

[Close]

BLAST of Clc06G14500 vs. TAIR 10
Match: AT2G18910.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-34
Identity = 91/175 (52.00%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 1   MPINSE-STPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFESPKKVIQPPPVQPPPHQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPPATP P   P  V + P   +  PPV PPP QF 
Sbjct: 1   MPINKDPSTPPPVIGKIGPYTVFMTPPATPKPPESPSAVSQKP---VMAPPVLPPPQQF- 60

Query: 61  KSVSVAASPNGNASVSGFFRNAVSKVQNGNSYDAMSCSAKWFSALSSFFEFNAGILGLQE 120
           KSV   AS + + SV GFF+NAV+KVQN                                
Sbjct: 61  KSV---ASSDQDGSVLGFFKNAVTKVQN-------------------------------- 120

Query: 121 TDARLAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKELSSKAQSV 175
                AHSS+DDHL RWFGLNQSKYQWALD+YYESK  +   +KAKE+  K QSV
Sbjct: 121 -----AHSSVDDHLVRWFGLNQSKYQWALDEYYESKESDMKTVKAKEMPGKVQSV 131

The following BLAST results are available for this feature:

BLAST of Clc06G14500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878417.1	9.8e-62	77.59	uncharacterized protein LOC120070657 [Benincasa hispida] >XP_038878418.1 unchara...	[more]
XP_008453592.1	7.8e-59	74.71	PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]	[more]
XP_004146326.1	1.7e-58	74.14	uncharacterized protein LOC101221556 [Cucumis sativus] >XP_011656891.1 uncharact...	[more]
XP_023530480.1	7.3e-57	72.99	uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530481....	[more]
XP_022930193.1	2.8e-56	72.41	myb-related transcription factor, partner of profilin-like [Cucurbita moschata] ...	[more]

BLAST of Clc06G14500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc06G14500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXF0	3.8e-59	74.71	uncharacterized protein LOC103494256 OS=Cucumis melo OX=3656 GN=LOC103494256 PE=...	[more]
A0A0A0LUN3	8.4e-59	74.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423260 PE=4 SV=1	[more]
A0A6J1KZL1	1.3e-56	72.41	myb-related transcription factor, partner of profilin-like OS=Cucurbita maxima O...	[more]
A0A6J1EQV9	1.3e-56	72.41	myb-related transcription factor, partner of profilin-like OS=Cucurbita moschata...	[more]
A0A6J1E0H4	1.4e-53	70.11	branchpoint-bridging protein-like OS=Cucurbita moschata OX=3662 GN=LOC111429721 ...	[more]

BLAST of Clc06G14500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18910.1	2.4e-34	52.00	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..56
None	No IPR available	PANTHER	PTHR37376:SF1	EXPRESSED PROTEIN	coord: 1..174
None	No IPR available	PANTHER	PTHR37376	EXPRESSED PROTEIN	coord: 1..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G14500.2	Clc06G14500.2	mRNA