Clc06G14130 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G14130
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box protein PP2-B10-like
Location	ClcChr06: 25077730 .. 25078696 (-)
RNA-Seq Expression	Clc06G14130
Synteny	Clc06G14130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCAGTCTGTTTGTATGCATATAAACTGAGTGGGTTCAGTTGGTATGTGGCAGAGCTTTTCATTGGACAAATGGAGTGGCAAAAAATGCATAATGCTTGGAGCAAGGGACCTGTCAATTGTTTTGGAGTGATAGCCCTGTCTATTGGACTTGGGAACCTCATCCTGAGTCGAGGTTTAAGTCTATTTGATTGCCTCAAATCCCATTCTTTTATCTTGTTTTTTCTCTCTTCTACTCCCAATACTTTTGTCCTTTAATGTGGGTGTGGTCATCAGGTTTGCTGAGGTAGCTGTTCTCCACAACGTTTGGTGGCTTGAAATTAAAGGAAAGTTAAGCTGCAAAATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCACCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGTTAGTCGTGATCCTGCATAGATGAGTTCTTGTAAACTTTGTGAATCTAAGCATACTGTATATAATAATACAACAATACTCAACCTTTGCAACTGTTGAAATACGAACAAGGAAAAAAGTCTTGTAAACTTTAGTAATATCATGGTGATGTACTATTATAGTATTACTTTCGACTCTATTAAAAGGATAACCCAAAACTTTGCTCTGTATATGGAAAAGTTAAACTACGGTAG

mRNA sequence

ATGCGCAGTCTGTTTGCTGAGGTAGCTGTTCTCCACAACGTTTGGTGGCTTGAAATTAAAGGAAAGTTAAGCTGCAAAATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCACCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGATAACCCAAAACTTTGCTCTGTATATGGAAAAGTTAAACTACGGTAG

Coding sequence (CDS)

ATGCGCAGTCTGTTTGCTGAGGTAGCTGTTCTCCACAACGTTTGGTGGCTTGAAATTAAAGGAAAGTTAAGCTGCAAAATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCACCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGATAACCCAAAACTTTGCTCTGTATATGGAAAAGTTAAACTACGGTAG

Protein sequence

MRSLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKDNPKLCSVYGKVKLR

Homology

[Close]

BLAST of Clc06G14130 vs. NCBI nr
Match: XP_038878692.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 293.9 bits (751), Expect = 9.0e-76
Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKMLCPATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 144 SRFAEVAVLLNVWWLEIKGKLSCKMLCPATTYAAYFVFKMSERRYYGFDIVAADAAVAIV 203

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GEC +SRVC+DPFLDNAPPKRRRR  CLRRNPLGNSMSRAKQPQERHDGWFEIELGEL 
Sbjct: 204 AGECWTSRVCLDPFLDNAPPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELH 263

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDE+EFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 264 NNGGDDEIEFFLKEVNCNYSKSGLIVQGIDIRPK 297

[Close]

BLAST of Clc06G14130 vs. NCBI nr
Match: XP_004146303.1 (F-box protein PP2-B10 [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_019738 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 140/154 (90.91%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 140 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 199

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFL+NAPPKRRRR  CLRRNPLGNSMSRAKQPQERHDGWFEIELGELR
Sbjct: 200 DGECCSSRVCLDPFLENAPPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 259

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDD VEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 260 NNGGDDVVEFFLKEVNCNYSKSGLIVQGIDIRPK 293

[Close]

BLAST of Clc06G14130 vs. NCBI nr
Match: TYK09497.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 285.0 bits (728), Expect = 4.2e-73
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 184 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 243

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFLD APPK RRR  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL 
Sbjct: 244 DGECCSSRVCLDPFLDIAPPK-RRRTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELH 303

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 304 NNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 336

[Close]

BLAST of Clc06G14130 vs. NCBI nr
Match: XP_008453631.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058311.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 285.0 bits (728), Expect = 4.2e-73
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 140 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 199

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFLD APPK RRR  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL 
Sbjct: 200 DGECCSSRVCLDPFLDIAPPK-RRRTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELH 259

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 260 NNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 292

[Close]

BLAST of Clc06G14130 vs. NCBI nr
Match: XP_022929404.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 5.5e-49
Identity = 104/171 (60.82%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F EVAVL   WW+E++GK+SCKML  ATTY AYFVFKMNE RYYGFDIV AD  V IV
Sbjct: 139 SRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNE-RYYGFDIVPADAKVGIV 198

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNP---------------LGNSMSRAKQPQ 122
           GGECC+  V +DP+LDN+  KR+R +      P                G +MSR   P+
Sbjct: 199 GGECCTISVGLDPYLDNSQRKRQRLVWMGSNAPGHRQRLRWMGSKTHTPGINMSRMALPK 258

Query: 123 ERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKDN 159
           ERHDGWFEIE+GE  NN GDDEVE  LKEVNCNYSK GLIVQGI+IRPK++
Sbjct: 259 ERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKNS 308

[Close]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-18
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F +VA L +V W EI+G+ + ++L P T Y AY VFK    + YGF  VA +  V +V
Sbjct: 133 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVV 192

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
           G E     +C    +     +R RR                 +P++R DGW EIELGE  
Sbjct: 193 GQEPSRRLICFSEAI-----RRGRR--------------NVVKPKQREDGWMEIELGEFF 252

Query: 123 NNVG---DDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
           N+ G   +DE+E    E      K GLI+QGI+IRP
Sbjct: 253 NDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.9e-18
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVG- 64
           F  VA L  V   EI+G+++ +++ P T Y AY V+K      YGF+ VA +  V +VG 
Sbjct: 159 FETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFENVAVEVVVGVVGQ 218

Query: 65  --GECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGEL 124
              E C   +C D  +D             RR   G ++ +   P+ R DGW EI++GE 
Sbjct: 219 DLEESCRRYICFDETMDEQ----------FRRRDRGKNLVK---PERRKDGWMEIKIGEF 278

Query: 125 RNNVG---DDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            N  G   DDE+E    E    + K GLI+QGI+IRP
Sbjct: 279 FNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 63/183 (34.43%), Postives = 81/183 (44.26%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F +VA L NV W E++GK+SC ML   T Y  Y VFK    R YGFD+V  +  V  V
Sbjct: 151 SKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFV 210

Query: 63  GGECCSSRVCMD------------------PFLDNAPPKRRRRITCLRRNPLGNSMSRAK 122
           G       V  +                    +  A   RR  +   R         R +
Sbjct: 211 GKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERER 270

Query: 123 -----QPQERHDGWFEIELGELRNN------VGDDEVEFFLKEVNCNYSKSGLIVQGIDI 157
                 P+ER DGW E+ELG+   N       G DE+E  + E      KSGLI+QGI+I
Sbjct: 271 GMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEI 330

[Close]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-16
Identity = 58/152 (38.16%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGG 64
           F EVA L  VWWLEI GK++  +L   T Y AYFVFK N    YGF      ET  ++  
Sbjct: 122 FGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSP-YGFR--QPVETSLVLAD 181

Query: 65  ECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN 124
              +  V     +             L ++  G      + P  R DGW+E+ELG+    
Sbjct: 182 TESTDNVVQPSMIS------------LMQDSGG---EEGQSPVLRRDGWYEVELGQFFKR 241

Query: 125 VGD-DEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            GD  E+E  LKE    Y K GLIV GI+IRP
Sbjct: 242 RGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255

[Close]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15
Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGG 64
           F EV  L NV W E++G ++ K L P T Y AY VFK  +        V  + TV +VG 
Sbjct: 169 FEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK-TKNGCPNLGDVPVEATVGLVGQ 228

Query: 65  ECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN 124
           E     +      D    +  R +T               +P +R DGW E ELG+  N 
Sbjct: 229 ESSQRHIYFVGPSDQRRDRETRDVT---------------RPTKRKDGWMEAELGQFFNE 288

Query: 125 VGDDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            G D V+  + E+   Y K GLI+QGI+ RP
Sbjct: 289 SGCDVVDTSILEIKTPYWKRGLIIQGIEFRP 303

[Close]

BLAST of Clc06G14130 vs. ExPASy TrEMBL
Match: A0A0A0LWS1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.4e-76
Identity = 140/154 (90.91%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 140 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 199

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFL+NAPPKRRRR  CLRRNPLGNSMSRAKQPQERHDGWFEIELGELR
Sbjct: 200 DGECCSSRVCLDPFLENAPPKRRRRTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 259

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDD VEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 260 NNGGDDVVEFFLKEVNCNYSKSGLIVQGIDIRPK 293

[Close]

BLAST of Clc06G14130 vs. ExPASy TrEMBL
Match: A0A5A7UXV0 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006450 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 140 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 199

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFLD APPK RRR  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL 
Sbjct: 200 DGECCSSRVCLDPFLDIAPPK-RRRTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELH 259

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 260 NNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 292

[Close]

BLAST of Clc06G14130 vs. ExPASy TrEMBL
Match: A0A5D3CBY5 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00980 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 184 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 243

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFLD APPK RRR  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL 
Sbjct: 244 DGECCSSRVCLDPFLDIAPPK-RRRTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELH 303

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 304 NNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 336

[Close]

BLAST of Clc06G14130 vs. ExPASy TrEMBL
Match: A0A1S3BWT7 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S FAEVAVL NVWWLEIKGKLSCKML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV
Sbjct: 140 SRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIV 199

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
            GECCSSRVC+DPFLD APPK RRR  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL 
Sbjct: 200 DGECCSSRVCLDPFLDIAPPK-RRRTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELH 259

Query: 123 NNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 157
           NN GDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK
Sbjct: 260 NNGGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPK 292

[Close]

BLAST of Clc06G14130 vs. ExPASy TrEMBL
Match: A0A6J1ENM7 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435984 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.7e-49
Identity = 104/171 (60.82%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F EVAVL   WW+E++GK+SCKML  ATTY AYFVFKMNE RYYGFDIV AD  V IV
Sbjct: 139 SRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNE-RYYGFDIVPADAKVGIV 198

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNP---------------LGNSMSRAKQPQ 122
           GGECC+  V +DP+LDN+  KR+R +      P                G +MSR   P+
Sbjct: 199 GGECCTISVGLDPYLDNSQRKRQRLVWMGSNAPGHRQRLRWMGSKTHTPGINMSRMALPK 258

Query: 123 ERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKDN 159
           ERHDGWFEIE+GE  NN GDDEVE  LKEVNCNYSK GLIVQGI+IRPK++
Sbjct: 259 ERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKNS 308

[Close]

BLAST of Clc06G14130 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19
Identity = 59/156 (37.82%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F +VA L +V W EI+G+ + ++L P T Y AY VFK    + YGF  VA +  V +V
Sbjct: 133 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVV 192

Query: 63  GGECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELR 122
           G E     +C    +     +R RR                 +P++R DGW EIELGE  
Sbjct: 193 GQEPSRRLICFSEAI-----RRGRR--------------NVVKPKQREDGWMEIELGEFF 252

Query: 123 NNVG---DDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
           N+ G   +DE+E    E      K GLI+QGI+IRP
Sbjct: 253 NDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of Clc06G14130 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 91.7 bits (226), Expect = 6.3e-19
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVG- 64
           F  VA L  V   EI+G+++ +++ P T Y AY V+K      YGF+ VA +  V +VG 
Sbjct: 159 FETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGFENVAVEVVVGVVGQ 218

Query: 65  --GECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGEL 124
              E C   +C D  +D             RR   G ++ +   P+ R DGW EI++GE 
Sbjct: 219 DLEESCRRYICFDETMDEQ----------FRRRDRGKNLVK---PERRKDGWMEIKIGEF 278

Query: 125 RNNVG---DDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            N  G   DDE+E    E    + K GLI+QGI+IRP
Sbjct: 279 FNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of Clc06G14130 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-18
Identity = 63/183 (34.43%), Postives = 81/183 (44.26%), Query Frame = 0


Query: 3   SLFAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIV 62
           S F +VA L NV W E++GK+SC ML   T Y  Y VFK    R YGFD+V  +  V  V
Sbjct: 151 SKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFV 210

Query: 63  GGECCSSRVCMD------------------PFLDNAPPKRRRRITCLRRNPLGNSMSRAK 122
           G       V  +                    +  A   RR  +   R         R +
Sbjct: 211 GKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERER 270

Query: 123 -----QPQERHDGWFEIELGELRNN------VGDDEVEFFLKEVNCNYSKSGLIVQGIDI 157
                 P+ER DGW E+ELG+   N       G DE+E  + E      KSGLI+QGI+I
Sbjct: 271 GMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEI 330

[Close]

BLAST of Clc06G14130 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-17
Identity = 58/152 (38.16%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGG 64
           F EVA L  VWWLEI GK++  +L   T Y AYFVFK N    YGF      ET  ++  
Sbjct: 122 FGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSP-YGFR--QPVETSLVLAD 181

Query: 65  ECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN 124
              +  V     +             L ++  G      + P  R DGW+E+ELG+    
Sbjct: 182 TESTDNVVQPSMIS------------LMQDSGG---EEGQSPVLRRDGWYEVELGQFFKR 241

Query: 125 VGD-DEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            GD  E+E  LKE    Y K GLIV GI+IRP
Sbjct: 242 RGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255

[Close]

BLAST of Clc06G14130 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 0


Query: 5   FAEVAVLHNVWWLEIKGKLSCKMLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGG 64
           F EV  L NV W E++G ++ K L P T Y AY VFK  +        V  + TV +VG 
Sbjct: 169 FEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFK-TKNGCPNLGDVPVEATVGLVGQ 228

Query: 65  ECCSSRVCMDPFLDNAPPKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN 124
           E     +      D    +  R +T               +P +R DGW E ELG+  N 
Sbjct: 229 ESSQRHIYFVGPSDQRRDRETRDVT---------------RPTKRKDGWMEAELGQFFNE 288

Query: 125 VGDDEVEFFLKEVNCNYSKSGLIVQGIDIRP 156
            G D V+  + E+   Y K GLI+QGI+ RP
Sbjct: 289 SGCDVVDTSILEIKTPYWKRGLIIQGIEFRP 303

The following BLAST results are available for this feature:

BLAST of Clc06G14130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878692.1	9.0e-76	90.26	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_004146303.1	1.5e-75	90.91	F-box protein PP2-B10 [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_019...	[more]
TYK09497.1	4.2e-73	89.61	F-box protein PP2-B10-like [Cucumis melo var. makuwa]	[more]
XP_008453631.1	4.2e-73	89.61	PREDICTED: F-box protein PP2-B10-like [Cucumis melo] >KAA0058311.1 F-box protein...	[more]
XP_022929404.1	5.5e-49	60.82	F-box protein PP2-B10-like [Cucurbita moschata]	[more]

BLAST of Clc06G14130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	4.0e-18	37.82	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9ZVQ8	8.9e-18	36.31	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q6NPT8	2.0e-17	34.43	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q949S5	3.7e-16	38.16	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
Q9ZVR5	1.9e-15	34.44	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]

BLAST of Clc06G14130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWS1	7.4e-76	90.91	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 ...	[more]
A0A5A7UXV0	2.0e-73	89.61	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3CBY5	2.0e-73	89.61	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BWT7	2.0e-73	89.61	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1	[more]
A0A6J1ENM7	2.7e-49	60.82	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435984 PE=4 SV...	[more]

BLAST of Clc06G14130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02360.1	2.8e-19	37.82	phloem protein 2-B10	[more]
AT2G02340.1	6.3e-19	36.31	phloem protein 2-B8	[more]
AT2G02230.1	1.4e-18	34.43	phloem protein 2-B1	[more]
AT1G80110.1	2.7e-17	38.16	phloem protein 2-B11	[more]
AT2G02250.1	1.3e-16	34.44	phloem protein 2-B2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 3..155 e-value: 9.9E-37 score: 126.2
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 3..156
None	No IPR available	PANTHER	PTHR32278:SF15	F-BOX PROTEIN PP2-B10-LIKE	coord: 3..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G14130.2	Clc06G14130.2	mRNA