Clc06G10605 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G10605
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ferredoxin--NADP reductase, chloroplastic
Location	ClcChr06: 18161166 .. 18164561 (-)
RNA-Seq Expression	Clc06G10605
Synteny	Clc06G10605

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGTGCAACAAGCAAGTGCACCAAAGGTATCCGTTGCACCTTTAGACCTTGAAGATGCCAATAACCTCCATTGAATTTATACAAACCAAAAGAACCTTACACCGCAACTATTGTTTCGGTTGAAAGACTTGTTGGACCAAAAGCACCGAGAGAGACTTGTCATATTGTAATCGATCATGGCAGTAACGTTCCCTATTGGGAATGTAAGCACTGACTTGTGATACCAAGTGTTGGGGTGCGGCGATGCGATTGTGGCTATGCGTTGCAAGGGGTGAAGTAGTCGTGAGTGAGAGCAAGAATTTTTGGAAAGCGAAATTTTGGCTAAGTATTGGCCAAGCCCATGCGTTGTTGATTGACTCATGGAGGGTCGTGAGTTGAAGTAGTTGCCCGCATCGAAGGATAACTAATTTTGGCGGGGGTGGGGGGGGGGGGGGGAAGAAATGTTCTTGAACCATGCGTTTAAGTCACTCTGCGTTGAGGACAGTTATGCGCTGAAGTCGATGTGTTGAAGACAGACATGCGATGAAGTCCCTCCGCGTCGAAGACAGAATGGTCTTGACGCGACGAAAATAGTGGTGTATGACGGGGATGTATGCGTAAAAAATAGGAGGCGTTGAGGACGACACCATGCGTTGGGTGTGGTTAGTTGCAGAAGGCATTGGAGGAGAAGTCTAACATGAGTGCCTCACGTTGAGGTGAGAACCCTGCGCCAGCCTGTGGGTGAGGGGTAAGTCGGCAACACAAGTCTTGGTGTTTGTGAAGGCTAAGTCGGTAGTATATATAGTTGGATTAATTAAATGTTTAATCATTTTTAAGACATTTTCGAGAGCCTAAGTCGGTTCCATATTTCAGACAAACTTCAGGAGGAGATTGAGGAAGGTGTTCTTGCGGATTGTGGGCGAAATTCTACTCATATTGGTGTTGAAAACGGAGCTGGAACAGAAGATTGATTGAAATCGCACAGACTGAACAGTGGCTGATATTTGGAGTAGAACGAATAGAGGAAGCCGAGTTTAGAGCTGAAATTTGGAGGTCAGTAAGTTAACATAATTCCTAACAAATCTTGTGAAGGATGGTAAAGCTGAAATTGAAGTTAATTATGTGAATCCTTAGGGAAAGCAGCACTTACAAGATTGTTAAGCAATCTGGAGCAACATGAAGTGATTTTGGAATAACGAGAGAACGAAGAGAAGTTAAGCCTTGAAATTTTGAGGTAAGCTATAAAACTAAATTCTCTATAAGTTTGTAGAAGGGAAGAAGTTCTAAATCCGTCTGAAATTATGACTTTTAGTAGATTGAAGTAAGAACAAGAGGAAAAGAAGATATCACAGTGTGTGGTGCCGCTATCGGCGCGCTGTCTAAGTACTGGAAGCGAGACGAGTGTCGCTGAGACGCAAAGGAGTCTTCCGTCTCACAAAACTCGCTAGATATCACTAGGTGTCGTTGCTAAGGTAAGGTAACGCTAGTGTTGCTCAATCTAATATCGCTAGTGACAGCTTCTGTTGGGTAGTATCGCTAGAATTCTCGCTTATGATGTTAGTTTGAAAAAGGGGGAGGTTCAATGTAAAGTAACACATGGTAAAATGTTAATTGCAGGCCAAGAAGAGATAGGGAAGGCATATAACCCGCGCAAGAACTAGGAAGAGTTGTGAGTGACTCCTTTATTCTTCAATTCGATTTTTATTAAAAATGTTATTATGAAATATGACTTTGCGAATGAATTGTTTAAAATGCATAATGTTTGATTGTATTACTCACAAGGCATGTTTTATGTTTTCTAAAGTTGATAGAAAGCATTTTTATGAGAAGTTATTGAATAAAGATCTGTATGATTTTCTATGAAAGGGTTTTTATATGAACTGTTATATGAATGGATTTTCTAAAATGTTTTAGAGGAGGCTCAGTGCTCAAGGACATGAGACGGCACGTGAGTTTCCCCGGGACCCAATACTGAAGGACATGAGAAGGTACTTGGGCAACCCGTCATATTCCTATGTGCACATAGAGGTTGATTTGGCTGGTGCGTCGAGTTTGCTTCGCATTGAGCCAGGGATGATTTTGACGTTGGGTGTGTTAAGCCTTGCTCCACCCCCAACTAAGGTTGTTTTCGACGTTGAGTGCGTTGAGCGTTGCTCCGCCTCAACTAAGGGAAAAGTTTGAAAAACCAAACTGTTTACTGTATCACTTCTTTTGGAAAACAATCATGTATGATTTGAAATTGGATTTATGTGATTGATGGACTTGTGGAAAGTATGCTATAGTTGGATAATATGTTAAATCCTTGTTATCTGTTTATATGTAACATGCCTGTTTTCAATAAATGTCCGTTTTATAAAGATTGGTCACTCACTGGGCTGTTAGCTTATGTTTTTAATGTTTTCTTTTCCTCCCTCCAGGTAGCAAGAACGTTCCCGGTGCTTAGCCTACTTCAGCTCACCCTGCCTAAGTCTCGAGTTCTTGAAATTCAATCAAGTCTGAGAGTTGTACGTTGTATATAACTTTATGTAGATGGCATGTAGACTTAGTAGTTTTTGGGCGGGGATTATAGTGAGGTTTTGTACAATGTATGATAGATGTGAAAGTTTAAATATTGTTTATATGATAAAAGTGTACTCTGTACAGGGAGTAATATGTTATGTTATAAGCATGTGTAGTATGATTGAGTTCTATGAATGTATATGAGTAAATGTGTGCACAAGAAGATGAGCAAATGAGACAATATGCGTCACAAGAGGAGTGATGTTTATTGTCTTCACATTCCCTTTCAGGATAGGTAGGAATCCGGGAGGGGGTGTGACAGGGAAGGTCAGAGCTATGGTGTTATTCCTCCAGTAAGTCACTCATGCCTCGGTGATTCCCCTATTACTGCATTGAGTTTTGATATAGATGCTCATGTTAAGATGTTTCTCAGTCGTGCATTTTATAAGACTTTTGTATTGGTACTTTGAGATCTAAGTTCTATTTCAATTATTATTTTTTTTAATCATGAATTTCTGGTTAAAAAACAATATGCTTGGTTTTTTAGCTTTTATGAATTTTTCCACTCTTTGTTGTTCTTTTGTATCTTTTTGATTGCTAAAGTTAATAAGGTATCTTTTACCTTCCTCTGTGACCTATGACATGGCTTTGTTTGTGGACTTCTTTTTGATAAGCTTCAGCCAGAATCTAATAATTTTTCACTTGTATCATAGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTCTCTACTCAATTGCGTCAACTAGGTATAAAGCTTCTTTTGATGGAAAGACTGCTAGTTTATGTGTTCCCCGTGCCGTTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGCAGCAAAGAACGGAATATGTTGAAGTTCTAA

mRNA sequence

ATGTCAGTGCAACAAGCAAGTGCACCAAAGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTCTCTACTCAATTGCGTCAACTAGGTATAAAGCTTCTTTTGATGGAAAGACTGCTAGTTTATGTGTTCCCCGTGCCGTTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGCAGCAAAGAACGGAATATGTTGAAGTTCTAA

Coding sequence (CDS)

ATGTCAGTGCAACAAGCAAGTGCACCAAAGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTCTCTACTCAATTGCGTCAACTAGGTATAAAGCTTCTTTTGATGGAAAGACTGCTAGTTTATGTGTTCCCCGTGCCGTTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGCAGCAAAGAACGGAATATGTTGAAGTTCTAA

Protein sequence

MSVQQASAPKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICSKERNMLKF

Homology

[Close]

BLAST of Clc06G10605 vs. NCBI nr
Match: XP_008439552.1 (PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 5.9e-19
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNGICS
Sbjct: 139 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGICS 198

[Close]

BLAST of Clc06G10605 vs. NCBI nr
Match: XP_026450338.1 (ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Papaver somniferum] >RZC52745.1 hypothetical protein C5167_021167 [Papaver somniferum])

HSP 1 Score: 103.6 bits (257), Expect = 7.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 140 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 199

[Close]

BLAST of Clc06G10605 vs. NCBI nr
Match: XP_015162905.1 (PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic isoform X2 [Solanum tuberosum])

HSP 1 Score: 103.6 bits (257), Expect = 7.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 129 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 188

[Close]

BLAST of Clc06G10605 vs. NCBI nr
Match: XP_006363650.1 (PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [Solanum tuberosum])

HSP 1 Score: 103.6 bits (257), Expect = 7.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 135 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 194

[Close]

BLAST of Clc06G10605 vs. NCBI nr
Match: XP_004231567.1 (ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Solanum lycopersicum])

HSP 1 Score: 103.6 bits (257), Expect = 7.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 135 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 194

[Close]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot
Match: Q41014 (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 5.0e-21
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  +FDGKTASLCV RAVYYDP TGK+DPSKNG+CS
Sbjct: 137 PPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPVTGKEDPSKNGVCS 196

[Close]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot
Match: O04397 (Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LY IASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 136 PPGENPKKPGNPHNVRLYLIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 195

[Close]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot
Match: Q9S9P8 (Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RFNR2 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 142 PPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 201

[Close]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot
Match: P41345 (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0784700 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-20
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY  SFDG+T SLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 138 PPGENPKKPGAPHNVRLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCS 197

[Close]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot
Match: Q9M0V6 (Ferredoxin--NADP reductase, root isozyme 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RFNR1 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-20
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Sbjct: 138 PPGENPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVCS 197

[Close]

BLAST of Clc06G10605 vs. ExPASy TrEMBL
Match: A0A1S3AZN4 (Ferredoxin--NADP reductase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484314 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNGICS
Sbjct: 139 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGICS 198

[Close]

BLAST of Clc06G10605 vs. ExPASy TrEMBL
Match: A0A4Y7IZA4 (Ferredoxin--NADP reductase, chloroplastic OS=Papaver somniferum OX=3469 GN=C5167_021167 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 140 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 199

[Close]

BLAST of Clc06G10605 vs. ExPASy TrEMBL
Match: A0A2G2XDK9 (Ferredoxin--NADP reductase, chloroplastic OS=Capsicum baccatum OX=33114 GN=CQW23_04069 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 135 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 194

[Close]

BLAST of Clc06G10605 vs. ExPASy TrEMBL
Match: A0A0V0I3K7 (Ferredoxin--NADP reductase, chloroplastic OS=Solanum chacoense OX=4108 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 135 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 194

[Close]

BLAST of Clc06G10605 vs. ExPASy TrEMBL
Match: M1AUU9 (Ferredoxin--NADP reductase, chloroplastic OS=Solanum tuberosum OX=4113 GN=102579393 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.7e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 135 PPGENPKKPGSPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 194

[Close]

BLAST of Clc06G10605 vs. TAIR 10
Match: AT1G30510.3 (root FNR 2 )

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-22
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 77  PPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 136

[Close]

BLAST of Clc06G10605 vs. TAIR 10
Match: AT1G30510.1 (root FNR 2 )

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-22
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 141 PPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 200

[Close]

BLAST of Clc06G10605 vs. TAIR 10
Match: AT1G30510.2 (root FNR 2 )

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-22
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Sbjct: 142 PPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCS 201

[Close]

BLAST of Clc06G10605 vs. TAIR 10
Match: AT4G05390.1 (root FNR 1 )

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-21
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Sbjct: 138 PPGENPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVCS 197

[Close]

BLAST of Clc06G10605 vs. TAIR 10
Match: AT4G05390.2 (root FNR 1 )

HSP 1 Score: 99.0 bits (245), Expect = 1.8e-21
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 9   PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS 68
           P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Sbjct: 110 PPGENPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVCS 169

The following BLAST results are available for this feature:

BLAST of Clc06G10605 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439552.1	5.9e-19	83.33	PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Cucumis melo...	[more]
XP_026450338.1	7.7e-19	81.67	ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Papaver somniferum...	[more]
XP_015162905.1	7.7e-19	81.67	PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic isoform ...	[more]
XP_006363650.1	7.7e-19	81.67	PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [So...	[more]
XP_004231567.1	7.7e-19	81.67	ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Solanum lycopersic...	[more]

BLAST of Clc06G10605 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41014	5.0e-21	80.00	Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum OX=3888...	[more]
O04397	1.1e-20	78.33	Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacu...	[more]
Q9S9P8	1.1e-20	78.33	Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thalian...	[more]
P41345	1.5e-20	76.67	Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. j...	[more]
Q9M0V6	2.5e-20	76.67	Ferredoxin--NADP reductase, root isozyme 1, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Clc06G10605 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZN4	2.8e-19	83.33	Ferredoxin--NADP reductase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348431...	[more]
A0A4Y7IZA4	3.7e-19	81.67	Ferredoxin--NADP reductase, chloroplastic OS=Papaver somniferum OX=3469 GN=C5167...	[more]
A0A2G2XDK9	3.7e-19	81.67	Ferredoxin--NADP reductase, chloroplastic OS=Capsicum baccatum OX=33114 GN=CQW23...	[more]
A0A0V0I3K7	3.7e-19	81.67	Ferredoxin--NADP reductase, chloroplastic OS=Solanum chacoense OX=4108 PE=3 SV=1	[more]
M1AUU9	3.7e-19	81.67	Ferredoxin--NADP reductase, chloroplastic OS=Solanum tuberosum OX=4113 GN=102579...	[more]

BLAST of Clc06G10605 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30510.3	7.9e-22	78.33	root FNR 2	[more]
AT1G30510.1	7.9e-22	78.33	root FNR 2	[more]
AT1G30510.2	7.9e-22	78.33	root FNR 2	[more]
AT4G05390.1	1.8e-21	76.67	root FNR 1	[more]
AT4G05390.2	1.8e-21	76.67	root FNR 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 4..70 e-value: 1.3E-14 score: 56.4
None	No IPR available	PANTHER	PTHR43314:SF22	FERREDOXIN--NADP REDUCTASE, EMBRYO ISOZYME, CHLOROPLASTIC	coord: 8..69
IPR015701	Ferredoxin--NADP reductase	PANTHER	PTHR43314	FAMILY NOT NAMED	coord: 8..69
IPR017938	Riboflavin synthase-like beta-barrel	SUPERFAMILY	63380	Riboflavin synthase domain-like	coord: 23..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G10605.1	Clc06G10605.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0004324	ferredoxin-NADP+ reductase activity
molecular_function	GO:0016491	oxidoreductase activity