
Clc06G10250 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAATCCAAATTTACAATTTTCCTTTTCTGAAGGGCCATAAAAAGAATTAGTATTAACTCTGGGGAATTTATTACAAATGTCAAAGAATAAGGATGAGATTGCAAATTTCATTACTTTCCAAAACCCCAAAACCCTAATATCTGCTCCTCTTTATAAGCAACCGAGAGGTCTTGGTTTATCCATCGCACTCCACAGCTTCGTTGAAGGTAAACCCTCTCTTCATTATCGCTTTCCTCTCTATTGAAGCTTTTTGTTTTGCCCTAGAATGTGAGACTCTGCGTTCTGCAAGTGCACATATCGAAGGCTTTCAGGTTCATTGCATAAATGCCTGCTGAGCTCAAAACTTGTGCAATATTGTTTCCTCGTCATTCGCTCTAGCACGTCCTTTGGAGTTTATAGACCGATTTCGTGTCCGGCCTCTGCGGGATTTGGGAGTGATGACGGACATTTTCTGATCCGTCTTTCACTTTTCATTGATTAGTTTTATTTTTTTTCCTTTTTGTTTTCCTTCTTTGCTATACTGAGAGTTGTATTGAGATTCTAGAAATTGTTTCTGTTGTTGAGTTCTGCTTTTTTTTTTGTTTTGTTTTTATACTTGTTAATGTGATTCATACTGTTTGTGTTTTTTGGGATTGTCATAAGCTACATATTCGCTTACCTTTTAGTTTATTTTCTACATGAGAGGAATTAACAAGAGTAGGGCTAATGTAAATGTTCTGTTTTGTTGACATGAGTACTGAAAACTTGTTTTTTCTGGAATTATTGTAGTGCACTATCGAAAATTTTAAGGAGGTATTTTGTAAAGAAATGACAATAATAGGATTGTTTCCTGGCAAACGATGTGTAGATGACAGTTTTTCAAGTGAATCAGGAATGAAGAATCTAATCTAAAAATTGTGTCTTTGAGATACTCCTTCAAGTAAATCATGTCCACTGTTTTCAAGTTGTTATCTCAAGTAATTCGTGGATAGTAAGATTATCTATTTATAACTGTGCCGTTTTCTCATTATTCTTGAATCATAATCTTTTAAGAATCTCTAATTGTGGTAGCAAACATGTTTGACTGATGTGTTGACTGTGGACTGGAAGCAGCGGTACTTATTACTAAAAGAGAGCAATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCGAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGAAGGTAGAAATTTTCACTTTCAATTCTTGGAAATATTGCTTTCTTGTCTGTCCCCTCTAAACAGAACGCTCATGGCTCAAAAATCTTCTTAAGTAGTACAAGGCCAATAGGCAGTTACTTTATGAGATGAGGGATGATTACGAGTAAATATTTGTTTGGAAGAAAAAGCATCGAAGTTAGAAGCCAACTAGAATATTGATCCCACATTCAATAATTTGAAACTTGTATGTGGAGTAATTCCAAAATATGGTTCATTTTGTTTTCAACTTTTGAAAATGTATCATTTTCAAGAATGGGGTAATTTGAAGAATAATGCAATTTAAAAAAATAATGTGAAAAATTGAATGAGTTGGAAACTAATTTGGAAATTAGGGTAGTACATAATTTCACTTAGTCACTTGCTAGCAGTTGATTTGGATTTACGAGTTTAGTCTAAACTCGTTTTGGTGAGTTGTGGACTTGGTTCACGAGCTCAGTCTAAACTCATGGACTACTAGTTTTTTTTTTTTTTTTTTTTTTTTAAGAAATTAACTAATTAATTAATCCCTTAAATGAAAATTTGTATATTGCTTTGTTTTTATTTTTATTGATTCTTAATTTTTGAAAATATAATTAAAAATTATTAATTTATTTAATTAAAAATAAAAGTTAATACAAATAAAAAATTTAAAATATAAGTTACGTGCCACATGGTGGTCTTTTTGGTGTATGTTGTCCATGATGAGACATTGTTGATGGTGAATTAATGTCACATTGCATGTACTCCCAATGATTCACTTCTAAATTACAATATTGAATTATGTAATATGTGAGGTTTCTGGTCATTTGAGCTTTGGAATAGTTGTCATGTTATCTCTGTCGTTTACGACACGACGAATACGTCTTTGATTAGTGTAAGTTATCATTGAGTCTCTGTGTATGTTGAATGATATTTTCAACGTTTATCATATACATTAAACTCAATTCTTGTAAATCGTATTGTAATGAATAATTGTGCATGTTGTGAACAAGTATAAAATAATATTCTTAGTATATAATGGTAAGACTATATATAATAAAATGCTTATCATGCGATAATAGTAAGCACTGTCGGGTGTGATAAATCTTATTAATACATCTGACTCATGTATATGTATTATTTCTTCTTGTGCACAGCGGTCATGACGTGCATGCCAAAAGAATATATATTTTGCATGAGTATGGCGCTAGTTTGGTTGTGTTTACCTCGTTGGTATCGTTTGGTGCAGATTGAATTGGTGTGTATGATGTCCAATTGATCTTGAATTGGTGTGTATGATGTCCAATTGATCTATTCTAAT TTGTAATCCAAATTTACAATTTTCCTTTTCTGAAGGGCCATAAAAAGAATTAGTATTAACTCTGGGGAATTTATTACAAATGTCAAAGAATAAGGATGAGATTGCAAATTTCATTACTTTCCAAAACCCCAAAACCCTAATATCTGCTCCTCTTTATAAGCAACCGAGAGGTCTTGGTTTATCCATCGCACTCCACAGCTTCGTTGAAGCGGTACTTATTACTAAAAGAGAGCAATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCGAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGAAGCGGTCATGACGTGCATGCCAAAAGAATATATATTTTGCATGAGTATGGCGCTAGTTTGGTTGTGTTTACCTCGTTGGTATCGTTTGGTGCAGATTGAATTGGTGTGTATGATGTCCAATTGATCTTGAATTGGTGTGTATGATGTCCAATTGATCTATTCTAAT ATGTCCAACCCAAAAGTCTTCTTTGATATTTTGATTGGGAGGATGAAAGCAGGCCGGATTGTCATGGAGTTATTTGCAGACACAACTCCGAAAACTGCAGAGAATTTCCGAGCCCTCTGCACTGGAGAGAAGGGGATCGGAAGATCTGGGAAACCACTGCATTATAAAGGCTCAACATTTCACCGTATAATCCCGAAGTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACGGGGCCGGGTATCCTATCAATGGCGAATGCTGGACAAGACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGAATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTGGAGGAGATGGAAAAGGTGGGTTCAGATAGTGGGAAGACTTCACAAACAGTTGTGATAGAAGATTGTGGGCAGATCTCTGAGAGTTGA MSNPKVFFDILIGRMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKPLHYKGSTFHRIIPKFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGQDTNGSQFFICTEKTPWLNGKHVVFGKVVDGYSVVEEMEKVGSDSGKTSQTVVIEDCGQISES Homology
BLAST of Clc06G10250 vs. NCBI nr
Match: XP_038880644.1 (peptidyl-prolyl cis-trans isomerase CYP19-3-like [Benincasa hispida] >XP_038880645.1 peptidyl-prolyl cis-trans isomerase CYP19-3-like [Benincasa hispida]) HSP 1 Score: 356.7 bits (914), Expect = 1.1e-94 Identity = 170/174 (97.70%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Clc06G10250 vs. NCBI nr
Match: XP_022156642.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Momordica charantia]) HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89 Identity = 158/172 (91.86%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Clc06G10250 vs. NCBI nr
Match: XP_022961274.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita moschata]) HSP 1 Score: 338.6 bits (867), Expect = 3.2e-89 Identity = 160/174 (91.95%), Postives = 167/174 (95.98%), Query Frame = 0
BLAST of Clc06G10250 vs. NCBI nr
Match: KAG7033434.1 (Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 338.6 bits (867), Expect = 3.2e-89 Identity = 160/174 (91.95%), Postives = 167/174 (95.98%), Query Frame = 0
BLAST of Clc06G10250 vs. NCBI nr
Match: XP_022988225.1 (peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima] >XP_022988226.1 peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima]) HSP 1 Score: 338.2 bits (866), Expect = 4.2e-89 Identity = 159/174 (91.38%), Postives = 167/174 (95.98%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy Swiss-Prot
Match: Q38867 (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=CYP19-3 PE=2 SV=2) HSP 1 Score: 303.9 bits (777), Expect = 1.2e-81 Identity = 139/171 (81.29%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.1e-79 Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy Swiss-Prot
Match: Q38900 (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana OX=3702 GN=CYP19-1 PE=2 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-79 Identity = 136/171 (79.53%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 7.0e-79 Identity = 136/172 (79.07%), Postives = 153/172 (88.95%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy Swiss-Prot
Match: Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.5e-78 Identity = 135/172 (78.49%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy TrEMBL
Match: A0A6J1DSI0 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111023491 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.2e-90 Identity = 158/172 (91.86%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy TrEMBL
Match: A0A6J1HDK2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111461821 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 1.6e-89 Identity = 160/174 (91.95%), Postives = 167/174 (95.98%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy TrEMBL
Match: A0A6J1JJ00 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111485527 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89 Identity = 159/174 (91.38%), Postives = 167/174 (95.98%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy TrEMBL
Match: B9S7J2 (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis OX=3988 GN=RCOM_0608620 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88 Identity = 158/174 (90.80%), Postives = 168/174 (96.55%), Query Frame = 0
BLAST of Clc06G10250 vs. ExPASy TrEMBL
Match: A0A059D3H3 (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02135 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.3e-88 Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 0
BLAST of Clc06G10250 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 ) HSP 1 Score: 303.9 bits (777), Expect = 8.2e-83 Identity = 139/171 (81.29%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Clc06G10250 vs. TAIR 10
Match: AT3G56070.2 (rotamase cyclophilin 2 ) HSP 1 Score: 303.9 bits (777), Expect = 8.2e-83 Identity = 139/171 (81.29%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Clc06G10250 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 ) HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80 Identity = 136/171 (79.53%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Clc06G10250 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 288.1 bits (736), Expect = 4.7e-78 Identity = 132/171 (77.19%), Postives = 151/171 (88.30%), Query Frame = 0
BLAST of Clc06G10250 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 ) HSP 1 Score: 276.9 bits (707), Expect = 1.1e-74 Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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