Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGGAGATACCAAAGACAATTCGGGACTACTTCCAACCGAAATTACCAGCAAATCAACCCGACATTATGAATATACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATCCACATGGCTAAAGAGCTAGCCTTTAGAGGAAGACCCAATGAAGATCCTCACAAGCACTTACGATCTTTCTTAGAGATATGCGGGACGGTAAAGGTGAATGGTGTTTCTAACGATGCAATTAAACTAAGACTTTTTCCTTTCTCTTTATAGGACTGTGCTAAGGATTGGTTGGAAACCATACCTCCAAATAGCATCACAACGTAGGAGATTTTATCTCAAGCTTTCTTGAACAAATATTTTCCACCGGCTAAATCTCAAAACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAATTATTTGAGGCTTGGGAGAGGTATAAGGATCTCTTGAGAAGATGCCCTCAACATGGTTACCCGAATTGGTTGCAAATTCAACTCTTCTACAATGGATTAGCAAGCTCAACCAAATCCATACTAGATGCAACCGCCGGAGGGTCAATTTTTTCAAAGAATGCTCAAGAGGCCTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCATGTGAACGGTATTCTCCAATCATCCCAAAAACCACCGGACAATATGAGATTGATGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCAAGCAAGTCCATCATCCTTAGCTTCCCTTGCGGCCATGGCAAGTCAACAAGAGCCTAGTGAGTTAGAAGTGGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTCCAACTCACTATCATCCCAACTTGAGAAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTGTTGCAAGCACCTCAAGGATTCAATTAA
mRNA sequence
ATGGCGGAGGAGATACCAAAGACAATTCGGGACTACTTCCAACCGAAATTACCAGCAAATCAACCCGACATTATGAATATACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATCCACATGGCTAAAGAGCTAGCCTTTAGAGGAAGACCCAATGAAGATCCTCACAAGCACTTACGATCTTTCTTAGAGATATGCGGGACGGACTGTGCTAAGGATTGGTTGGAAACCATACCTCCAAATAGCATCACAACGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAATTATTTGAGGCTTGGGAGAGGTATAAGGATCTCTTGAGAAGATGCCCTCAACATGGTTACCCGAATTGGTTGCAAATTCAACTCTTCTACAATGGATTAGCAAGCTCAACCAAATCCATACTAGATGCAACCGCCGGAGGGTCAATTTTTTCAAAGAATGCTCAAGAGGCCTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCATGTGAACGGTATTCTCCAATCATCCCAAAAACCACCGGACAATATGAGATTGATGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCAAGCAAGTCCATCATCCTTAGCTTCCCTTGCGGCCATGGCAAGTCAACAAGAGCCTAGTGAGTTAGAAGTGGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTCCAACTCACTATCATCCCAACTTGAGAAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTGTTGCAAGCACCTCAAGGATTCAATTAA
Coding sequence (CDS)
ATGGCGGAGGAGATACCAAAGACAATTCGGGACTACTTCCAACCGAAATTACCAGCAAATCAACCCGACATTATGAATATACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATCCACATGGCTAAAGAGCTAGCCTTTAGAGGAAGACCCAATGAAGATCCTCACAAGCACTTACGATCTTTCTTAGAGATATGCGGGACGGACTGTGCTAAGGATTGGTTGGAAACCATACCTCCAAATAGCATCACAACGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAATTATTTGAGGCTTGGGAGAGGTATAAGGATCTCTTGAGAAGATGCCCTCAACATGGTTACCCGAATTGGTTGCAAATTCAACTCTTCTACAATGGATTAGCAAGCTCAACCAAATCCATACTAGATGCAACCGCCGGAGGGTCAATTTTTTCAAAGAATGCTCAAGAGGCCTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCATGTGAACGGTATTCTCCAATCATCCCAAAAACCACCGGACAATATGAGATTGATGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCAAGCAAGTCCATCATCCTTAGCTTCCCTTGCGGCCATGGCAAGTCAACAAGAGCCTAGTGAGTTAGAAGTGGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTCCAACTCACTATCATCCCAACTTGAGAAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTGTTGCAAGCACCTCAAGGATTCAATTAA
Protein sequence
MAEEIPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNEDPHKHLRSFLEICGTDCAKDWLETIPPNSITTTEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLKAQLASLTNALSKLSQGSQAQASPSSLASLAAMASQQEPSELEVANYVDRGQYRGQQQLPTHYHPNLRNHENFSYANNKNVLQAPQGFN
Homology
BLAST of Clc06G10180 vs. NCBI nr
Match:
WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 465.3 bits (1196), Expect = 3.7e-127
Identity = 245/330 (74.24%), Postives = 260/330 (78.79%), Query Frame = 0
Query: 1 MAEEIPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNEDPHKH 60
MAEEIPK IRDYFQP LPA+QP IMN+PINVNNFELKPGLI MA+ELAFRGR NEDPHKH
Sbjct: 49 MAEEIPKAIRDYFQPTLPASQPGIMNVPINVNNFELKPGLIQMARELAFRGRTNEDPHKH 108
Query: 61 LRSFLEICGT---------------------DCAKDWLETIPPNSITT------------ 120
LRSFLEICGT D AKDWLETIPP+SITT
Sbjct: 109 LRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITTWEILAQAFLNKY 168
Query: 121 ----------TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASST 180
TEIGTFRQLEDEQL+EAWERYKDLLRRCPQHGYP+WLQIQLFYNGLASST
Sbjct: 169 FPPAKSQRLRTEIGTFRQLEDEQLYEAWERYKDLLRRCPQHGYPDWLQIQLFYNGLASST 228
Query: 181 KSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLKA 240
KSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCER SP IPK G YE+DEV+SLKA
Sbjct: 229 KSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERASPNIPKAAGLYEVDEVNSLKA 288
Query: 241 QLASLTNALSKLSQGSQAQASPSSLASLAAMASQQ-EPSELEVANYVDRGQYRG--QQQL 285
Q+ASLTNALSKL+ G QAQ +P S+ASLAA+AS+ + E ANYVDRG YR QQL
Sbjct: 289 QMASLTNALSKLTAGGQAQTNPPSIASLAALASEMGVHGDNETANYVDRGHYRNYQHQQL 348
BLAST of Clc06G10180 vs. NCBI nr
Match:
XP_024020480.1 (uncharacterized protein LOC112091333 [Morus notabilis])
HSP 1 Score: 243.0 bits (619), Expect = 3.0e-60
Identity = 135/324 (41.67%), Postives = 189/324 (58.33%), Query Frame = 0
Query: 4 EIPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNEDPHKHLRS 63
E + IRDYF+P + + I +N NNFELKP LI M ++ F G PNEDP+ HL
Sbjct: 12 EQQRAIRDYFKPPVQEHYSGIRRQTVNANNFELKPSLILMVQQNQFGGLPNEDPNTHLSM 71
Query: 64 FLEICGT---------------------DCAKDWLETIPPNSITT--------------- 123
FLE T D A+ WL ++P SI T
Sbjct: 72 FLEAADTVKINGVTEGTIRLKLFPFSLRDKARQWLMSLPTRSIGTWEEMTKRFLAKFFPP 131
Query: 124 -------TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASSTKSI 183
+E+G+F Q + E L+EAWER+KDLLR+CPQHGY W+ I FYNGL +++I
Sbjct: 132 SKASQLQSEVGSFYQNDFEPLYEAWERFKDLLRKCPQHGYDEWILIDRFYNGLNGQSRTI 191
Query: 184 LDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLKAQLA 243
+D+TA GS+ +K+ EAY +LE+++T SY WP ER P KT G +E+D ++SL AQ++
Sbjct: 192 VDSTASGSLMAKSIPEAYNLLEEMSTNSYQWPSERSIP--KKTAGIHEVDPLTSLSAQVS 251
Query: 244 SLTNALSKLSQGSQAQASPSSLASLAAMASQQEPSELEVANYVDRGQYRGQQQLPTHYHP 285
+L+N ++ L+ +A +S ++A + + +Q E ++ +V +R QLP HYHP
Sbjct: 252 ALSNQIAALT-NREASSSREAVAGASTLFAQDEYTQEQVQFVNNRNFNYKPNQLPNHYHP 311
BLAST of Clc06G10180 vs. NCBI nr
Match:
KAG7947748.1 (hypothetical protein I3843_14G109500 [Carya illinoinensis])
HSP 1 Score: 240.0 bits (611), Expect = 2.6e-59
Identity = 137/334 (41.02%), Postives = 195/334 (58.38%), Query Frame = 0
Query: 1 MAEE----IPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNED 60
MAEE +P+T++DY +P + N IM PIN NNFELKP LI M ++ F G P +D
Sbjct: 1 MAEEDREVLPRTLKDYVRPVVNGNYSSIMRQPINANNFELKPALISMVQQAQFSGSPLDD 60
Query: 61 PHKHLRSFLEICGT---------------------DCAKDWLETIPPNSITT-------- 120
P+ HL FLEIC T D A+ WL+++ P SI +
Sbjct: 61 PNVHLAMFLEICDTVKINGVTEDTIRLRLFPFSLRDKARGWLQSLQPGSIVSWQDMAERF 120
Query: 121 --------------TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGL 180
+EIG F+Q + E L+EAWERYKDL+RRCPQHG P+WLQ+Q+FYNGL
Sbjct: 121 LAKFFPPAKTAQLRSEIGQFKQNDFESLYEAWERYKDLIRRCPQHGLPDWLQVQMFYNGL 180
Query: 181 ASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVS 240
T++I+DA +GG++ SK A+ A +LE++A+ +Y WP ER + K G +E++ ++
Sbjct: 181 NGQTRTIVDAASGGTLMSKTAEGATALLEEMASNNYQWPTER--TLAKKVAGIHELEPIA 240
Query: 241 SLKAQLASLTNALSKLSQGSQAQASPSSLASLAAMASQQEPSELEVANYVDRG-QYRGQQ 285
+L AQ+A+L++ +S L+ + S +AS + + E S+ +V +R YRG
Sbjct: 241 ALSAQVATLSHQISALTT-QRIPQSTEYVASTSMIVPSNEASQEQVQYVNNRNYNYRG-N 300
BLAST of Clc06G10180 vs. NCBI nr
Match:
KAG6734747.1 (hypothetical protein I3842_01G285500 [Carya illinoinensis])
HSP 1 Score: 240.0 bits (611), Expect = 2.6e-59
Identity = 137/334 (41.02%), Postives = 195/334 (58.38%), Query Frame = 0
Query: 1 MAEE----IPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNED 60
MAEE +P+T++DY +P + N IM PIN NNFELKP LI M ++ F G P +D
Sbjct: 1 MAEEDREVLPRTLKDYVRPVVNGNYSSIMRQPINANNFELKPALISMVQQAQFSGSPLDD 60
Query: 61 PHKHLRSFLEICGT---------------------DCAKDWLETIPPNSITT-------- 120
P+ HL FLEIC T D A+ WL+++ P SI +
Sbjct: 61 PNVHLAMFLEICDTVKINGVTEDTIRLRLFPFSLRDKARGWLQSLQPGSIVSWQDMAERF 120
Query: 121 --------------TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGL 180
+EIG F+Q + E L+EAWERYKDL+RRCPQHG P+WLQ+Q+FYNGL
Sbjct: 121 LAKFFPPAKTAQLRSEIGQFKQNDFESLYEAWERYKDLIRRCPQHGLPDWLQVQMFYNGL 180
Query: 181 ASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVS 240
T++I+DA +GG++ SK A+ A +LE++A+ +Y WP ER + K G +E++ ++
Sbjct: 181 NGQTRTIVDAASGGTLMSKTAEGATALLEEMASNNYQWPTER--TLAKKVAGIHELEPIA 240
Query: 241 SLKAQLASLTNALSKLSQGSQAQASPSSLASLAAMASQQEPSELEVANYVDRG-QYRGQQ 285
+L AQ+A+L++ +S L+ + S +AS + + E S+ +V +R YRG
Sbjct: 241 ALSAQVATLSHQISALTT-QRIPQSTEYVASTSMIVPSNEASQEQVQYVNNRNYNYRG-N 300
BLAST of Clc06G10180 vs. NCBI nr
Match:
KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])
HSP 1 Score: 239.6 bits (610), Expect = 3.3e-59
Identity = 137/334 (41.02%), Postives = 195/334 (58.38%), Query Frame = 0
Query: 1 MAEE----IPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNED 60
MAEE +P+T++DY +P + N IM PIN NNFELKP LI M ++ F G P +D
Sbjct: 31 MAEEDREVLPRTLKDYVRPVVNGNYSSIMRQPINANNFELKPALISMVQQAQFSGSPLDD 90
Query: 61 PHKHLRSFLEICGT---------------------DCAKDWLETIPPNSITT-------- 120
P+ HL FLEIC T D A+ WL+++ P SI +
Sbjct: 91 PNIHLAMFLEICDTVKINGVTEDTIRLRLFPFSLRDKARGWLQSLQPGSIVSWQDMAERF 150
Query: 121 --------------TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGL 180
+EIG F+Q + E L+EAWERYKDL+RRCPQHG P+WLQ+Q+FYNGL
Sbjct: 151 LAKFFPPAKTAQLRSEIGQFKQNDFESLYEAWERYKDLIRRCPQHGLPDWLQVQMFYNGL 210
Query: 181 ASSTKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVS 240
T++I+DA +GG++ SK A+ A +LE++A+ +Y WP ER + K G ++++ ++
Sbjct: 211 NGQTRTIVDAASGGTLMSKTAEGATALLEEMASNNYQWPTER--TLAKKVAGIHDLEPIA 270
Query: 241 SLKAQLASLTNALSKLSQGSQAQASPSSLASLAAMASQQEPSELEVANYVDRG-QYRGQQ 285
+L AQ+A+L++ +S L+ + S LAS + + E S+ +V +R YRG
Sbjct: 271 ALSAQVATLSHQISALTT-QRIPQSTEYLASTSMIVPSNEASQEQVQYVNNRNYNYRG-N 330
BLAST of Clc06G10180 vs. ExPASy TrEMBL
Match:
A0A6J1DU19 (uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024361 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 8.6e-53
Identity = 115/229 (50.22%), Postives = 146/229 (63.76%), Query Frame = 0
Query: 8 TIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNEDPHKHLRSFLEI 67
TIRDY QP P N I+N+PIN NN ELKPGLI M +E FRG EDP+ HL FL++
Sbjct: 26 TIRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGNATEDPNNHLTIFLDV 85
Query: 68 CGT-----------------------DCAKDWLETIPPNSITT---TEIGTFRQLEDEQL 127
CGT + + +L P + TT TEI +FR+ + EQL
Sbjct: 86 CGTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQLRTEIRSFRKYDYEQL 145
Query: 128 FEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTIL 187
FE WERYK+LLR+CPQHG WLQIQ+FYNGL T++ILDA AGG++ S+ + AY +L
Sbjct: 146 FEVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAGGTLLSRTPENAYILL 205
Query: 188 EDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLKAQLASLTNALSKLS 211
+D+A S+ WP ER + K G YEIDE+SSLKAQ+ +LTNA+SKLS
Sbjct: 206 KDMADNSFQWPSERSN--AKKVAGMYEIDELSSLKAQVQALTNAVSKLS 251
BLAST of Clc06G10180 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 9.2e-47
Identity = 123/321 (38.32%), Postives = 168/321 (52.34%), Query Frame = 0
Query: 1 MAEEIPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAK-ELAFRGRPNEDPHK 60
+ E + +RDY P + I IN NNFE+KP I M + + F G P++DP+
Sbjct: 51 LVPEANRALRDYVVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNS 110
Query: 61 HLRSFLEICGT---------------------DCAKDWLETIPPNSITTTE--------- 120
HL +FLEIC T D AK WL ++P SITT E
Sbjct: 111 HLVNFLEICDTFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAK 170
Query: 121 -------------IGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASS 180
I +F Q + E L+EAWER+K+LLRRCP HG P+WLQ+Q FYNGL S
Sbjct: 171 FFPPAKTAKMRNDITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGS 230
Query: 181 TKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLK 240
K+I+DA AGG++ SKNA +AY +LE++A+ +Y WP ER K G YEID + +L
Sbjct: 231 IKTIIDAAAGGALMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLT 290
Query: 241 AQLASLTNALSKLSQGSQAQASPSSLASLA--AMASQQEPSELEVANYVDRGQYRGQQQL 274
Q+A+L+ L L G A + + + + + Q P E +V G + QQ
Sbjct: 291 TQVAALSKKLDTL--GVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFV--GNFNRQQNN 350
BLAST of Clc06G10180 vs. ExPASy TrEMBL
Match:
A0A6J0ZYV0 (uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC110413413 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 1.2e-46
Identity = 123/321 (38.32%), Postives = 168/321 (52.34%), Query Frame = 0
Query: 1 MAEEIPKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAK-ELAFRGRPNEDPHK 60
+ E + +RDY P + I IN NNFE+KP I M + + F G P++DP+
Sbjct: 51 LVPEANRALRDYAVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNS 110
Query: 61 HLRSFLEICGT---------------------DCAKDWLETIPPNSITTTE--------- 120
HL +FLEIC T D AK WL ++P SITT E
Sbjct: 111 HLVNFLEICDTFKYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAK 170
Query: 121 -------------IGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASS 180
I +F Q + E L+EAWER+K+LLRRCP HG P+WLQ+Q FYNGL S
Sbjct: 171 FFPPAKTAKMRNDITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGS 230
Query: 181 TKSILDATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLK 240
K+I+DA AGG++ SKNA +AY +LE++A+ +Y WP ER K G YEID + +L
Sbjct: 231 IKTIIDAAAGGALMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLT 290
Query: 241 AQLASLTNALSKLSQGSQAQASPSSLASLA--AMASQQEPSELEVANYVDRGQYRGQQQL 274
Q+A+L+ L L G A + + + + + Q P E +V G + QQ
Sbjct: 291 TQVAALSKKLDTL--GVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFV--GNFNRQQNN 350
BLAST of Clc06G10180 vs. ExPASy TrEMBL
Match:
A0A6P4BN28 (uncharacterized protein LOC107431659 OS=Ziziphus jujuba OX=326968 GN=LOC107433759 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 110/301 (36.54%), Postives = 169/301 (56.15%), Query Frame = 0
Query: 29 INVNNFELKPGLIHMAKELAFRGRPNEDPHKHLRSFLEICGT------------------ 88
IN NNFELKP LI+M ++ F G +EDP+ HL FL++ T
Sbjct: 14 INANNFELKPALINMIQQNQFGGEASEDPNIHLTMFLQVADTIKFNGVNEDAIQLHLFPF 73
Query: 89 ---DCAKDWLETIPPNSITT----------------------TEIGTFRQLEDEQLFEAW 148
A W + P SI+T +EIG F QL+ + + EAW
Sbjct: 74 SLKGKALAWFHALQPESISTWEELMDRFLMKFFPPSKSSKLRSEIGQFHQLDFKPMNEAW 133
Query: 149 ERYKDLLRRCPQHGYPNWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLA 208
ER+K+LLR+CPQHGY W+ I LFYNGL TK+++++TA GS+ +K EAY +LE++A
Sbjct: 134 ERFKELLRKCPQHGYDEWVLIDLFYNGLNGHTKTVVNSTACGSLMAKTVDEAYALLEEMA 193
Query: 209 TTSYNWPCERYSPIIPKTTGQYEIDEVSSLKAQLASLTNALSKLSQGSQAQASPSSLASL 268
++S++WP ER P TG +E+D +++L ++ ++++ L+ S G+ +S SS+
Sbjct: 194 SSSFSWPIERQMGRRP--TGVHEVDVLTNLTVKVDAISHQLA--SFGTNVSSSSSSMDPT 253
Query: 269 AAMASQQEPSELEVANYVDRGQ---YRGQQQLPTHYHPNLRNHENFSYANNKNVLQAPQG 284
++++ E ++V++ Q +R LP +YHP LRNH+NFSYAN +N L +P
Sbjct: 254 SSISFPMGKQSQEQCSFVEQSQSYNFRPNNNLPNYYHPGLRNHQNFSYANPRNALNSPPS 310
BLAST of Clc06G10180 vs. ExPASy TrEMBL
Match:
A0A803PT47 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 5.1e-45
Identity = 117/327 (35.78%), Postives = 168/327 (51.38%), Query Frame = 0
Query: 6 PKTIRDYFQPKLPANQPDIMNIPINVNNFELKPGLIHMAKELAFRGRPNEDPHKHLRSFL 65
P+ +RDYF P P LI+M + F EDP+ HL FL
Sbjct: 23 PRAVRDYFLP---------------------VPALINMVQHNQFGRLATEDPNIHLAIFL 82
Query: 66 EICG---------------------TDCAKDWLETIPPNSITT----------------- 125
E+C D + WL+++ P SI+T
Sbjct: 83 EVCAIVKMNGVTDDAIRLRLFPSSLRDRVRKWLQSMQPCSISTWDEMARKFMVKFFPPSK 142
Query: 126 -----TEIGTFRQLEDEQLFEAWERYKDLLRRCPQHGYPNWLQIQLFYNGLASSTKSILD 185
+EIG FR L+ E +EAWER KDLLR PQHGY +W+Q+ +FYNGL T++++D
Sbjct: 143 SAQLRSEIGQFRHLDSEPFYEAWERSKDLLRHYPQHGYESWMQVSIFYNGLNGPTRTLID 202
Query: 186 ATAGGSIFSKNAQEAYTILEDLATTSYNWPCERYSPIIPKTTGQYEIDEVSSLKAQLASL 245
A GG++ SK+ EA +LE++AT SYNWP ER + K G +E+D ++++ AQ+++L
Sbjct: 203 AAVGGALLSKHITEAINLLEEMATNSYNWPNERNTH--KKLAGLHEVDPMTNIAAQISAL 262
Query: 246 TNALSKLSQGSQAQASPSSLASLAAMASQQEPS-ELEVANYVD----RGQYRGQQQLPTH 285
+N + L + S++ ++ A ++ Q P +E A Y+ YRG +P +
Sbjct: 263 SNQEAALVN----HKNTSTVENVVAASTSQGPEMSIEQAQYMAYKTYNNNYRG-NPMPNY 321
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
WP_217833153.1 | 3.7e-127 | 74.24 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
XP_024020480.1 | 3.0e-60 | 41.67 | uncharacterized protein LOC112091333 [Morus notabilis] | [more] |
KAG7947748.1 | 2.6e-59 | 41.02 | hypothetical protein I3843_14G109500 [Carya illinoinensis] | [more] |
KAG6734747.1 | 2.6e-59 | 41.02 | hypothetical protein I3842_01G285500 [Carya illinoinensis] | [more] |
KAG7990634.1 | 3.3e-59 | 41.02 | hypothetical protein I3843_02G035100 [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU19 | 8.6e-53 | 50.22 | uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J0ZX64 | 9.2e-47 | 38.32 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
A0A6J0ZYV0 | 1.2e-46 | 38.32 | uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC11041... | [more] |
A0A6P4BN28 | 1.0e-45 | 36.54 | uncharacterized protein LOC107431659 OS=Ziziphus jujuba OX=326968 GN=LOC10743375... | [more] |
A0A803PT47 | 5.1e-45 | 35.78 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |