
Clc06G10168 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAATCAAACTTTTCGTCCCCCAGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAAGTAGGAGTAACGGGAACTATTTTTGATGTCCCTAGAAGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTCCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTCCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTATATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTCCACCAATCGAAGTTTCGCGCATTGTAGATGGTGGTAA MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLDAQTGCDVIKLMVDAIENIKPICEVENYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPASTNRSFAHCRWW Homology
BLAST of Clc06G10168 vs. NCBI nr
Match: XP_023521058.1 (uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 160.6 bits (405), Expect = 7.9e-36 Identity = 99/185 (53.51%), Postives = 104/185 (56.22%), Query Frame = 0
BLAST of Clc06G10168 vs. NCBI nr
Match: XP_038876459.1 (ribosomal protein S7, mitochondrial [Benincasa hispida]) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33 Identity = 97/185 (52.43%), Postives = 101/185 (54.59%), Query Frame = 0
BLAST of Clc06G10168 vs. NCBI nr
Match: MBA0790852.1 (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 118.2 bits (295), Expect = 4.5e-23 Identity = 75/158 (47.47%), Postives = 80/158 (50.63%), Query Frame = 0
BLAST of Clc06G10168 vs. NCBI nr
Match: KAF9660742.1 (hypothetical protein SADUNF_SadunfMtG0004900 [Salix dunnii]) HSP 1 Score: 117.5 bits (293), Expect = 7.7e-23 Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of Clc06G10168 vs. NCBI nr
Match: XP_021840260.1 (uncharacterized protein LOC110780146 [Spinacia oleracea]) HSP 1 Score: 115.2 bits (287), Expect = 3.8e-22 Identity = 74/159 (46.54%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy Swiss-Prot
Match: Q01902 (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 4.4e-21 Identity = 58/109 (53.21%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy Swiss-Prot
Match: P92557 (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.5e-21 Identity = 58/109 (53.21%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy Swiss-Prot
Match: Q9MF82 (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 4.8e-20 Identity = 56/109 (51.38%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy Swiss-Prot
Match: P26867 (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 6.8e-14 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy Swiss-Prot
Match: A7HM56 (30S ribosomal protein S7 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rpsG PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.0e-07 Identity = 37/107 (34.58%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy TrEMBL
Match: A0A7J9FZT5 (Ribosomal_S7 domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_015473 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.2e-23 Identity = 75/158 (47.47%), Postives = 80/158 (50.63%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy TrEMBL
Match: A0A803N8Z9 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.8e-22 Identity = 74/159 (46.54%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy TrEMBL
Match: A0A803N7E0 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.8e-22 Identity = 74/159 (46.54%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy TrEMBL
Match: A0A803MBG4 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.2e-22 Identity = 72/159 (45.28%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Clc06G10168 vs. ExPASy TrEMBL
Match: A0A142BZ01 (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.7e-21 Identity = 63/109 (57.80%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of Clc06G10168 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein ) HSP 1 Score: 101.3 bits (251), Expect = 5.3e-22 Identity = 58/109 (53.21%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Clc06G10168 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 ) HSP 1 Score: 101.3 bits (251), Expect = 5.3e-22 Identity = 58/109 (53.21%), Postives = 63/109 (57.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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