Clc06G10010 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G10010
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Retrotrans_gag domain-containing protein
Location	ClcChr06: 14010192 .. 14014422 (-)
RNA-Seq Expression	Clc06G10010
Synteny	Clc06G10010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCGAGGAAGCTAGAAGGTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACTCAAGGTAGGCGGCGAGATGATGCTCGTTTGTCCAGCTTAGAAGGACTGGAAAATGTGCAACTTGCCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAGTTGCCAAAAGAATGATCATGGAGCTTGGACGATGACGGGAGAAGAGGTAAGATCCCTTACTCAAGAAGTAGCCAACCTAAGGAAGTTCGTGGAAAGGGAACTCCACGATCTTCGCAAAGAGGTCGACGGCATTTGAAAGAAGTGTCGAGCCAGTCGTGGTGCAAAGGGTGAGGCGTCCACCAGCACCTCTGTCGCCGCAAGAAGCATTAATGGCTTAAAGATACCAAAGCCCGATACTTATGACGGCACAAGAAGTGCAATCATAGTGGATAACTTCTTGTTCGGCCTGGAACAATATTTTGATGCTCTGAATGTCGTCGACGATGGCGTCAAGATAGCCAATGCGCCCAACTTCCTGCTAGAGGCAACCCAGTTATGGTGGTGTAGGAAGTATACTGAGCGCGAGCGGGACGAAAATTGCATCCAAACGTGAGCAATTTAAAGCGGAGTTGCGGAAACATTTTGTCACACCCCCTCCCGGATTATCCTCCATAATCCAAAAAGAGATGTGAAGATAGCAGTTACTGACTACCCTGTCACGTAACCCACTGTCAGCCTCACCAATCCACATGCTCTTGACAAACCTCGACTTCGATCGGCAACGGGAATTGTCATGCTACCTGAAAATGGAAAACATTTAAAAGAATGAGCTAACGGCTCAGTGAGTAACAGTTTCTGGAAATAATATAATTTAACTCTAAAACCAGTCACATTCGCATAACATATCACTTTCAAACACATTAGTTTATATATTCATACATCACTGCGGAAACATGCTTATAAAATACTTTTTCCTTAGTTGAGGCGGAGCAATGCTCAACGCGACTCAACGTCGTTTTCCCTAGCTGTGTGGAGTAATCTCAACACATCAGCGTCATGTATATATATGCCCCTATGTGCACATAGGTTACCCATATCCCTTCTACGAGTCCCTGAGCATTGGGTACCTTTATATTCCGGGCCGCCCACAATGCCTTCTACGAGTCCTTGAGCATTGGGGTCCCATTTTAATAGAACGGCTACCCTTTGGCCTTCTCCATGTCCTTGAGCCTCAGGTGCCCTTTCAAGTTTACTTAACACAAAACATATTTGTAAATGTTATATCAGTAACTCATGAGTTTACCGTTTCGAAATCTTATTTCATCAGCTTGCTAAGTTCAATTTCACCTTCTAATATAAAACCACATGCTTTTCATCAAGTATACTTTCAAATCTTTCTTGAAATCATAACAATACCATGCTTTTCAGAAATGTTATGAAAACAAGTATTAATCATTCATCATACATGTTATAACTCATAACAAATACCCAACATTCTCAAGTTCTCAAGTAGAACGCATGCCCTTGTCTCTAAGACGCATGCTCGTGTCTCTATAAGTCACATAATCATATTCTGTATATATATATATATGAAAACGCATACATTATTTCATTAGAAACCCATAAAATCATATTCATAAAATCTCATTTATATTTTGTAAAACGCAGGTGTTACTCACCTGTACTTGCCACAGAATACTTCTTTTTCTTTTTCTTTAGTTCCTCTTCCCGAGTTTCCTGGACGCAACGTTCTAACCATGGAACATAAGACTCCATTTTCCTATGTTCGCTCGGTTGAACGCATCCCTACTCTTCAACGCAAGGTTGGTAACGCAAAGCTGATTATTTCTGCCAAGTGCATCCCGACTCCTCTTACTTCCCTTTCGGATGCGTCGCCCTCTCTTGGATGCAAGGTCCTTCATGGACGTGTCATCTAATCTGTGAACGCCGCGTTTACTTTGGACATTATGTTTGTCCTTAACGCATAGCTGACCCTTTCTAACACCAGACAACTTCTTTACATAAAATAACAAAGTTGTCAAATACCTTCTTTCTTGGCCGCATACTTCTACCACAGACGTCCTTGTTGCCTTTTCTTTTCTCTCCAGAATTCTTCTTTGGGGGTCATCAGTCACTCCTCTTCCCTCAAAGTTCTATTTATAGGAAGCTTGCCATCCAACTTCTCCTCTCCTTGTGCCACTTGTTTGCCACATGTCACGCTGCATGCTTAACTAATCATGCATTAGTCCAAGTGTCACTTTGCATGAAACACTTTACATACCTTTAACACCTCCTACTTTAAGGTGTTAAATCTATACATAGCCACTTGGCCTTATTAACTTATCTTGTGCGTCCAACATTTCCAACAGATAGCCATTTATGCATCACAACGCCCTCTTGTGTTCATTTAGTTTCCTTTAAAGTTTGAGCTTTACTACTTAGAAAACTCTCAGCCAACTATACTACTCTTTGACGCATAGAGATAATTTTGTCTTCAACGCGTAGGGACCTCAACGCATAACAACCTTACCAACGTATAGTAAGCCAAGTACGTTTCTTCTCCGCCAACGTGGCGACTATTTCAGTTCACAACCCTTCGTGATCATCCTCAACGCATAGCCACACTGTAATAAACCAGTGCTTACACAATGCTACTAGGCATTAATGACAAACGCCATATACTATCTGTATCCCATCGTGTCATACCATTTGTCCAACTCCTTTCTTATGTTCATAACAACTCTTTCTCAAGCTCTTTTCTCTACATGTTGGTCCTATCACGTTTATCTTCATTCCGTGTTCAATGACCATCTTCCTATCCTTGAACATTCCTTGATTACTCCCCAGATTATTCTTTTAACCTTTTCCACTTCACTTCTTTCCATTCTCGATTTACTTCCATGCGTCCACCCTTTCCATGCGTTACCTAGCCCTGACCATGCATCCAACATGGTCTTTTACCTCTTTTCTTTATAAATTCTTCAACGCATCGCTTCTTTTTTTTAAAAAAAATAGGGTGGGACACACTTTGTGCCCCACAATGCCGATGCGAAAGCACGAGGAAAATTGAGGCGTTTAAGGCAGACCGGTAGTATTCCCGAGTACATCAAGGAATTTACAACCCTCATGCTGGAAATTGAAGGTTTATCTGACAAAGACGCACTCTTTTATTTCCGCGATGGTTTAAAGGATTGGGCACGCGTTGAACTCGAGCGCCGCAATGTCCAGACGCTGGACGATGCGATAGCCGCTGCGGAGATGCTCACTGACTTCGCGTCCAAGACCAAGAAAGCTGCGAAGAAGGAAAAGGAAGTTTCGGAATCGGACGAATCTGATGGGCATAAAACTGAGGGCAGCCATAGGAATGGTCGATCGAACGGGAAGAAAAAGGAAAAAGCTGCCGAGAAAAATGGAGGTAAATCTGCCATGCGCCCTTGCTTCCTATGCGACGGACCACATTGGACGTGGGAATGCCCGAAGAAAAATGCTCTCAACGCCTTGGTGGCCCGATCCCGCGACGAAGAAAGTCAAGTTGAACCCGCTGCAAAGATGGGTTCCCTGCAGCTTATTGGCGCCATGACAAGTGACTTCTCACCCCGGAAGATTGGTGGGAAGGGACAACTATACGTTGATGCGAAAGTCAACGGTATAGTAAAAGAAGTGCTGCTCGACACAGGAGCATCGCACAACTATATCGACCCAAATATGGCCATAAGTCTTGGTCTCAAGGTCGAAAAAGAAGGCAGAAAGTTGAAAACGGTGAACTCAGCAGCCGTGAAAACCAAAGGAGTTGCTAAAGAAATTCCCTTAAAGGTGGGAAAATGGCGAGGTTCGGTTGATTTCACCGTGGTCCCATTGAACGATTACAAGGTGGTCCTAGGAATGGAGTTCTTCCACAAAGCTAACGCCACCTTGTCGCCCTCCTCAAAACAGTTGTCGTTGTTTGATGGACAACGCATAAGGGTGATCCCTTTGAAGGAGAAAGAGCTGTATGAGACAAAGGTAATGTCCGCACTCGTCAAAATAAAGGGATCCACAAAAAGAAGTAGGCGCTCAAGAAAGTCACAAGCAACGAGGGCGTTGCGAAGTGAAGTGGGGGAGGATGTCACGGGTAGAAATAATGGCATTTCAAACAGCAACACAAACGCCCTTAGCTCGCACTGCATCGTCAAAGAAAGGTCAAGAGTGAAGGGCCAACGCAATGACAAAGCCGCTGCATGA

mRNA sequence

ATGGCAACCGAGGAAGCTAGAAGGTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACTCAAGGTAGGCGGCGAGATGATGCTCGTTTGTCCAGCTTAGAAGGACTGGAAAATGTGCAACTTGCCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAAAGTGTCGAGCCAGTCGTGGTGCAAAGGGTGAGGCGTCCACCAGCACCTCTGTCGCCGCAAGAAGCATTAATGGCTTAAAGATACCAAAGCCCGATACTTATGACGGCACAAGAAGTGCAATCATAGTGGATAACTTCTTGTTCGGCCTGGAACAATATTTTGATGCTCTGAATGTCGTCGACGATGGCGTCAAGATAGCCAATGCGCCCAACTTCCTGCTAGAGGCAACCCAGTTATGGTGGTGTTACCCATATCCCTTCTACGAGTCCCTGAGCATTGGGTACCTTTATATTCCGGGCCGCCCACAATGCCTTCTACGAGTCCTTGAGCATTGGGGTCCCATTTTAATAGAACGGCTACCCTTTGGCCTTCTCCATGTCCTTGAGCCTCAGAATACTTCTTTTTCTTTTTCTTTAGTTCCTCTTCCCGAGTTTCCTGGACGCAACGTTCTAACCATGGAACATAAGACTCCATTTTCCTATGTTCGCTCGGTTGAACGCATCCCTACTCTTCAACGCAAGGTTGGTAACGCAAAGCTGATTATTTCTGCCAAGTGCATCCCGACTCCTCTTACTTCCCTTTCGGATGCGTCGCCCTCTCTTGGATGCAAGGGTGGGACACACTTTGTGCCCCACAATGCCGATGCGAAAGCACGAGGAAAATTGAGGCGTTTAAGGCAGACCGGTAGTATTCCCGAGTACATCAAGGAATTTACAACCCTCATGCTGGAAATTGAAGGTTTATCTGACAAAGACGCACTCTTTTATTTCCGCGATGGTTTAAAGGATTGGGCACGCGTTGAACTCGAGCGCCGCAATGTCCAGACGCTGGACGATGCGATAGCCGCTGCGGAGATGCTCACTGACTTCGCGTCCAAGACCAAGAAAGCTGCGAAGAAGGAAAAGGAAGTTTCGGAATCGGACGAATCTGATGGGCATAAAACTGAGGGCAGCCATAGGAATGGTCGATCGAACGGGAAGAAAAAGGAAAAAGCTGCCGAGAAAAATGGAGGTAAATCTGCCATGCGCCCTTGCTTCCTATGCGACGGACCACATTGGACGTGGGAATGCCCGAAGAAAAATGCTCTCAACGCCTTGGTGGCCCGATCCCGCGACGAAGAAAGTCAAGTTGAACCCGCTGCAAAGATGGGTTCCCTGCAGCTTATTGGCGCCATGACAAGTGACTTCTCACCCCGGAAGATTGGTGGGAAGGGACAACTATACGTTGATGCGAAAGTCAACGGTATAGTAAAAGAAGTGCTGCTCGACACAGGAGCATCGCACAACTATATCGACCCAAATATGGCCATAAGTCTTGGTCTCAAGGTCGAAAAAGAAGGCAGAAAGTTGAAAACGGTGAACTCAGCAGCCGTGAAAACCAAAGGAGTTGCTAAAGAAATTCCCTTAAAGGTGGGAAAATGGCGAGGTTCGGTTGATTTCACCGTGGTCCCATTGAACGATTACAAGGTGGTCCTAGGAATGGAGTTCTTCCACAAAGCTAACGCCACCTTGTCGCCCTCCTCAAAACAGTTGTCGTTGTTTGATGGACAACGCATAAGGGTGATCCCTTTGAAGGAGAAAGAGCTGTATGAGACAAAGGTAATGTCCGCACTCGTCAAAATAAAGGGATCCACAAAAAGAAGTAGGCGCTCAAGAAAGTCACAAGCAACGAGGGCGTTGCGAAGTGAAGTGGGGGAGGATGTCACGGGTAGAAATAATGGCATTTCAAACAGCAACACAAACGCCCTTAGCTCGCACTGCATCGTCAAAGAAAGGTCAAGAGTGAAGGGCCAACGCAATGACAAAGCCGCTGCATGA

Coding sequence (CDS)

ATGGCAACCGAGGAAGCTAGAAGGTCATCGGTAGAGCGAGTACAAGTTGAAGGACCAGTGACTCAAGGTAGGCGGCGAGATGATGCTCGTTTGTCCAGCTTAGAAGGACTGGAAAATGTGCAACTTGCCGTTGGTCGATTGAGTGAAAAATATGAAGAGCTCGTCCAAGAAAGCTCGGAGATCACGGCAAAGTGTCGAGCCAGTCGTGGTGCAAAGGGTGAGGCGTCCACCAGCACCTCTGTCGCCGCAAGAAGCATTAATGGCTTAAAGATACCAAAGCCCGATACTTATGACGGCACAAGAAGTGCAATCATAGTGGATAACTTCTTGTTCGGCCTGGAACAATATTTTGATGCTCTGAATGTCGTCGACGATGGCGTCAAGATAGCCAATGCGCCCAACTTCCTGCTAGAGGCAACCCAGTTATGGTGGTGTTACCCATATCCCTTCTACGAGTCCCTGAGCATTGGGTACCTTTATATTCCGGGCCGCCCACAATGCCTTCTACGAGTCCTTGAGCATTGGGGTCCCATTTTAATAGAACGGCTACCCTTTGGCCTTCTCCATGTCCTTGAGCCTCAGAATACTTCTTTTTCTTTTTCTTTAGTTCCTCTTCCCGAGTTTCCTGGACGCAACGTTCTAACCATGGAACATAAGACTCCATTTTCCTATGTTCGCTCGGTTGAACGCATCCCTACTCTTCAACGCAAGGTTGGTAACGCAAAGCTGATTATTTCTGCCAAGTGCATCCCGACTCCTCTTACTTCCCTTTCGGATGCGTCGCCCTCTCTTGGATGCAAGGGTGGGACACACTTTGTGCCCCACAATGCCGATGCGAAAGCACGAGGAAAATTGAGGCGTTTAAGGCAGACCGGTAGTATTCCCGAGTACATCAAGGAATTTACAACCCTCATGCTGGAAATTGAAGGTTTATCTGACAAAGACGCACTCTTTTATTTCCGCGATGGTTTAAAGGATTGGGCACGCGTTGAACTCGAGCGCCGCAATGTCCAGACGCTGGACGATGCGATAGCCGCTGCGGAGATGCTCACTGACTTCGCGTCCAAGACCAAGAAAGCTGCGAAGAAGGAAAAGGAAGTTTCGGAATCGGACGAATCTGATGGGCATAAAACTGAGGGCAGCCATAGGAATGGTCGATCGAACGGGAAGAAAAAGGAAAAAGCTGCCGAGAAAAATGGAGGTAAATCTGCCATGCGCCCTTGCTTCCTATGCGACGGACCACATTGGACGTGGGAATGCCCGAAGAAAAATGCTCTCAACGCCTTGGTGGCCCGATCCCGCGACGAAGAAAGTCAAGTTGAACCCGCTGCAAAGATGGGTTCCCTGCAGCTTATTGGCGCCATGACAAGTGACTTCTCACCCCGGAAGATTGGTGGGAAGGGACAACTATACGTTGATGCGAAAGTCAACGGTATAGTAAAAGAAGTGCTGCTCGACACAGGAGCATCGCACAACTATATCGACCCAAATATGGCCATAAGTCTTGGTCTCAAGGTCGAAAAAGAAGGCAGAAAGTTGAAAACGGTGAACTCAGCAGCCGTGAAAACCAAAGGAGTTGCTAAAGAAATTCCCTTAAAGGTGGGAAAATGGCGAGGTTCGGTTGATTTCACCGTGGTCCCATTGAACGATTACAAGGTGGTCCTAGGAATGGAGTTCTTCCACAAAGCTAACGCCACCTTGTCGCCCTCCTCAAAACAGTTGTCGTTGTTTGATGGACAACGCATAAGGGTGATCCCTTTGAAGGAGAAAGAGCTGTATGAGACAAAGGTAATGTCCGCACTCGTCAAAATAAAGGGATCCACAAAAAGAAGTAGGCGCTCAAGAAAGTCACAAGCAACGAGGGCGTTGCGAAGTGAAGTGGGGGAGGATGTCACGGGTAGAAATAATGGCATTTCAAACAGCAACACAAACGCCCTTAGCTCGCACTGCATCGTCAAAGAAAGGTCAAGAGTGAAGGGCCAACGCAATGACAAAGCCGCTGCATGA

Protein sequence

MATEEARRSSVERVQVEGPVTQGRRRDDARLSSLEGLENVQLAVGRLSEKYEELVQESSEITAKCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVDNFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQCLLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRSVERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRRLRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAAEMLTDFASKTKKAAKKEKEVSESDESDGHKTEGSHRNGRSNGKKKEKAAEKNGGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVEPAAKMGSLQLIGAMTSDFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVNSAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLFDGQRIRVIPLKEKELYETKVMSALVKIKGSTKRSRRSRKSQATRALRSEVGEDVTGRNNGISNSNTNALSSHCIVKERSRVKGQRNDKAAA

Homology

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BLAST of Clc06G10010 vs. NCBI nr
Match: KAA0065760.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 340.5 bits (872), Expect = 3.3e-89
Identity = 245/692 (35.40%), Postives = 340/692 (49.13%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI EY+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 361 LRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 420

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDES------DGHKTEG-SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   +SD++      DG K +    +NG+++G      A + 
Sbjct: 421 ETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG------AHRG 480

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 481 ESSNPPKPCFICKGPHWTRDCPNQKALNALVAKFQ-EIKQVEDAPGPQIGSMQQIGVMKK 540

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY   ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 541 ETT---VEHKGLLYGSIRIEGKEATAMFDTGASHNFMDVQEAKRLGLKYKEETGTVKVVN 576

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+ 
Sbjct: 601 AKEQTIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSII 576

[Close]

BLAST of Clc06G10010 vs. NCBI nr
Match: KAA0040414.1 (uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 338.6 bits (867), Expect = 1.2e-88
Identity = 245/693 (35.35%), Postives = 337/693 (48.63%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 361 LRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 420

Query: 421 EMLTDFASKTKKAAKKEKEVSESDESDGHKTEGSHRNGRSNGKKKEKAAEKNG------- 480
           E L D+++++K   KK        E  G K + +   GR +G K +    KNG       
Sbjct: 421 ETLVDYSAQSK--GKK-----PGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDGAHR 480

Query: 481 GKSA--MRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMT 540
           G+S+   +PCF+C GPHWT +CP + ALNALV + + +  QVE  P  ++GS+Q IG M 
Sbjct: 481 GESSNPPKPCFICKGPHWTRDCPNRKALNALVTKFQ-KVKQVEDAPGPQIGSMQQIGVMK 540

Query: 541 SDFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTV 600
            D +   +  KG LY   ++ G     + DTGASHN++D   A  LGLK ++E   +K V
Sbjct: 541 KDTT---VEHKGLLYGSIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGTIKVV 576

Query: 601 NSAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSL 610
           N+      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+
Sbjct: 601 NAKEQTIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSI 576

[Close]

BLAST of Clc06G10010 vs. NCBI nr
Match: KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-88
Identity = 243/692 (35.12%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSEIFEELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIA A
Sbjct: 361 LRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAVA 420

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDES------DGHKTEG-SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   +SD++      DG K +    +NG+++G      A + 
Sbjct: 421 ETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG------AHRG 480

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 481 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EIKQVEDAPGPQIGSMQQIGVMKK 540

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY   ++ G     + DTGASHN+ID   A  LGLK ++E   +K VN
Sbjct: 541 ETT---VEHKGLLYGSIRIEGKEATTMFDTGASHNFIDVQEAKRLGLKFKEETGIVKVVN 576

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+ 
Sbjct: 601 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSII 576

[Close]

BLAST of Clc06G10010 vs. NCBI nr
Match: KAA0042140.1 (uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa])

HSP 1 Score: 336.7 bits (862), Expect = 4.7e-88
Identity = 240/692 (34.68%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR++                   D RL++LE G+E+VQ
Sbjct: 154 MSAEEGHTSPVEQV-IEGPVTRGRKKQHSPTRRSKSKGPTVREHVDTRLTNLEKGMEDVQ 213

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 214 LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDL 273

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +C +        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 274 HTKSISFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 333

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +  QLWW + Y                   
Sbjct: 334 NFLFGLERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYADQSG-------------- 393

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 394 -------------------------------------------------------NAIHS 453

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+  T  RK                                 HFVPHNA+ ++RGKLR 
Sbjct: 454 WEQFKTELRK---------------------------------HFVPHNAEIESRGKLRH 513

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR  GSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 514 LRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 573

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDESD--GHKTEG-----SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   + D++   GHK  G       +NG+++G      A + 
Sbjct: 574 ETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKNGKNDG------AHRG 633

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 634 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EVKQVEDAPGPQIGSMQQIGVMKK 693

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY + ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 694 ETT---VEHKGLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVN 729

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    +  +   LS+ 
Sbjct: 754 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFDKVVTLIDSNRGTLSII 729

[Close]

BLAST of Clc06G10010 vs. NCBI nr
Match: TYK18079.1 (uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa])

HSP 1 Score: 336.7 bits (862), Expect = 4.7e-88
Identity = 240/692 (34.68%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR++                   D RL++LE G+E+VQ
Sbjct: 91  MSAEEGHTSPVEQV-IEGPVTRGRKKQHSPTRRSKSKGPTVREHVDTRLTNLEKGMEDVQ 150

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 151 LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDL 210

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +C +        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 211 HTKSISFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 270

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +  QLWW + Y                   
Sbjct: 271 NFLFGLERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYADQSG-------------- 330

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 331 -------------------------------------------------------NAIHS 390

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+  T  RK                                 HFVPHNA+ ++RGKLR 
Sbjct: 391 WEQFKTELRK---------------------------------HFVPHNAEIESRGKLRH 450

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR  GSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 451 LRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 510

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDESD--GHKTEG-----SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   + D++   GHK  G       +NG+++G      A + 
Sbjct: 511 ETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKNGKNDG------AHRG 570

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 571 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EVKQVEDAPGPQIGSMQQIGVMKK 630

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY + ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 631 ETT---VEHKGLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVN 666

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    +  +   LS+ 
Sbjct: 691 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFDKVVTLIDSNRGTLSII 666

[Close]

BLAST of Clc06G10010 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-89
Identity = 245/692 (35.40%), Postives = 340/692 (49.13%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI EY+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 361 LRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 420

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDES------DGHKTEG-SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   +SD++      DG K +    +NG+++G      A + 
Sbjct: 421 ETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG------AHRG 480

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 481 ESSNPPKPCFICKGPHWTRDCPNQKALNALVAKFQ-EIKQVEDAPGPQIGSMQQIGVMKK 540

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY   ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 541 ETT---VEHKGLLYGSIRIEGKEATAMFDTGASHNFMDVQEAKRLGLKYKEETGTVKVVN 576

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+ 
Sbjct: 601 AKEQTIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSII 576

[Close]

BLAST of Clc06G10010 vs. ExPASy TrEMBL
Match: A0A5A7TAA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00340 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 6.0e-89
Identity = 245/693 (35.35%), Postives = 337/693 (48.63%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 361 LRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 420

Query: 421 EMLTDFASKTKKAAKKEKEVSESDESDGHKTEGSHRNGRSNGKKKEKAAEKNG------- 480
           E L D+++++K   KK        E  G K + +   GR +G K +    KNG       
Sbjct: 421 ETLVDYSAQSK--GKK-----PGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDGAHR 480

Query: 481 GKSA--MRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMT 540
           G+S+   +PCF+C GPHWT +CP + ALNALV + + +  QVE  P  ++GS+Q IG M 
Sbjct: 481 GESSNPPKPCFICKGPHWTRDCPNRKALNALVTKFQ-KVKQVEDAPGPQIGSMQQIGVMK 540

Query: 541 SDFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTV 600
            D +   +  KG LY   ++ G     + DTGASHN++D   A  LGLK ++E   +K V
Sbjct: 541 KDTT---VEHKGLLYGSIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGTIKVV 576

Query: 601 NSAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSL 610
           N+      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+
Sbjct: 601 NAKEQTIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSI 576

[Close]

BLAST of Clc06G10010 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.3e-88
Identity = 243/692 (35.12%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR+                    D RL++LE G+E+VQ
Sbjct: 1   MSAEEGHTSPVEQV-IEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQ 60

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 61  LAVGRLSEIFEELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDL 120

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +CR+        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 121 HTKSISFETRLDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 180

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +A QLWW   Y                   
Sbjct: 181 NFLFGLERYFVALGVRDDEARINHAPTFLRDAAQLWWRRKYADQSG-------------- 240

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 241 -------------------------------------------------------NAIHS 300

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+     RK                                 HFVPHNA+ ++RGKLRR
Sbjct: 301 WEQFKAELRK---------------------------------HFVPHNAEIESRGKLRR 360

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR TGSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIA A
Sbjct: 361 LRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAVA 420

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDES------DGHKTEG-SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   +SD++      DG K +    +NG+++G      A + 
Sbjct: 421 ETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG------AHRG 480

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 481 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EIKQVEDAPGPQIGSMQQIGVMKK 540

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY   ++ G     + DTGASHN+ID   A  LGLK ++E   +K VN
Sbjct: 541 ETT---VEHKGLLYGSIRIEGKEATTMFDTGASHNFIDVQEAKRLGLKFKEETGIVKVVN 576

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    L  +   LS+ 
Sbjct: 601 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFNIVLGLGFFDKVVTLLDSNRGTLSII 576

[Close]

BLAST of Clc06G10010 vs. ExPASy TrEMBL
Match: A0A5D3D3V4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004150 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.3e-88
Identity = 240/692 (34.68%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR++                   D RL++LE G+E+VQ
Sbjct: 91  MSAEEGHTSPVEQV-IEGPVTRGRKKQHSPTRRSKSKGPTVREHVDTRLTNLEKGMEDVQ 150

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 151 LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDL 210

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +C +        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 211 HTKSISFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 270

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +  QLWW + Y                   
Sbjct: 271 NFLFGLERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYADQSG-------------- 330

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 331 -------------------------------------------------------NAIHS 390

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+  T  RK                                 HFVPHNA+ ++RGKLR 
Sbjct: 391 WEQFKTELRK---------------------------------HFVPHNAEIESRGKLRH 450

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR  GSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 451 LRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 510

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDESD--GHKTEG-----SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   + D++   GHK  G       +NG+++G      A + 
Sbjct: 511 ETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKNGKNDG------AHRG 570

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 571 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EVKQVEDAPGPQIGSMQQIGVMKK 630

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY + ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 631 ETT---VEHKGLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVN 666

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    +  +   LS+ 
Sbjct: 691 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFDKVVTLIDSNRGTLSII 666

[Close]

BLAST of Clc06G10010 vs. ExPASy TrEMBL
Match: A0A5A7TFP3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006290 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.3e-88
Identity = 240/692 (34.68%), Postives = 339/692 (48.99%), Query Frame = 0


Query: 1   MATEEARRSSVERVQVEGPVTQGRRRD------------------DARLSSLE-GLENVQ 60
           M+ EE   S VE+V +EGPVT+GR++                   D RL++LE G+E+VQ
Sbjct: 154 MSAEEGHTSPVEQV-IEGPVTRGRKKQHSPTRRSKSKGPTVREHVDTRLTNLEKGMEDVQ 213

Query: 61  LAVGRLSEKYEELVQESSEITA-------------------------------------- 120
           LAVGRLSE +EELVQE++EIT+                                      
Sbjct: 214 LAVGRLSENFEELVQENAEITSVAKEMIEDMGRTFQKELKELASTVTTLKAFVEGELHDL 273

Query: 121 ----------------KCRASRGAKGEASTSTSVAARSINGLKIPKPDTYDGTRSAIIVD 180
                           +C +        STST       + +K+PKPD Y+G R+A +VD
Sbjct: 274 HTKSISFETRLDALCVECHSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVD 333

Query: 181 NFLFGLEQYFDALNVVDDGVKIANAPNFLLEATQLWWCYPYPFYESLSIGYLYIPGRPQC 240
           NFLFGLE+YF AL V DD  +I +AP FL +  QLWW + Y                   
Sbjct: 334 NFLFGLERYFVALGVRDDEARINHAPTFLRDVAQLWWRHKYADQSG-------------- 393

Query: 241 LLRVLEHWGPILIERLPFGLLHVLEPQNTSFSFSLVPLPEFPGRNVLTMEHKTPFSYVRS 300
                                                                  + + S
Sbjct: 394 -------------------------------------------------------NAIHS 453

Query: 301 VERIPTLQRKVGNAKLIISAKCIPTPLTSLSDASPSLGCKGGTHFVPHNADAKARGKLRR 360
            E+  T  RK                                 HFVPHNA+ ++RGKLR 
Sbjct: 454 WEQFKTELRK---------------------------------HFVPHNAEIESRGKLRH 513

Query: 361 LRQTGSIPEYIKEFTTLMLEIEGLSDKDALFYFRDGLKDWARVELERRNVQTLDDAIAAA 420
           LR  GSI +Y+KEFTTLMLEI  L +K+ALF F+DGLKDWA++EL+RRNVQTLDDAIAAA
Sbjct: 514 LRHIGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNVQTLDDAIAAA 573

Query: 421 EMLTDFASKTK-KAAKKEKEVSESDESD--GHKTEG-----SHRNGRSNGKKKEKAAEKN 480
           E L D+++++K K    EK   + D++   GHK  G       +NG+++G      A + 
Sbjct: 574 ETLVDYSAQSKGKKPGPEKHGGKPDKTKNFGHKDGGKVKTFQWKNGKNDG------AHRG 633

Query: 481 GGKSAMRPCFLCDGPHWTWECPKKNALNALVARSRDEESQVE--PAAKMGSLQLIGAMTS 540
              +  +PCF+C GPHWT +CP + ALNALVA+ + E  QVE  P  ++GS+Q IG M  
Sbjct: 634 ESSNPPKPCFICKGPHWTRDCPNRKALNALVAKFQ-EVKQVEDAPGPQIGSMQQIGVMKK 693

Query: 541 DFSPRKIGGKGQLYVDAKVNGIVKEVLLDTGASHNYIDPNMAISLGLKVEKEGRKLKTVN 600
           + +   +  KG LY + ++ G     + DTGASHN++D   A  LGLK ++E   +K VN
Sbjct: 694 ETT---VEHKGLLYGNIRIEGKEATTMFDTGASHNFMDVQEAKRLGLKFKEETGIVKVVN 729

Query: 601 SAAVKTKGVAKEIPLKVGKWRGSVDFTVVPLNDYKVVLGMEFFHKANATLSPSSKQLSLF 610
           +      GVAK + +K+G W+  +DF+V+P++D+ +VLG+ FF K    +  +   LS+ 
Sbjct: 754 AKEQAIHGVAKGVLVKIGDWQKRLDFSVLPMDDFHIVLGLGFFDKVVTLIDSNRGTLSII 729

The following BLAST results are available for this feature:

BLAST of Clc06G10010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065760.1	3.3e-89	35.40	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0040414.1	1.2e-88	35.35	uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]	[more]
KAA0040659.1	2.8e-88	35.12	uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]	[more]
KAA0042140.1	4.7e-88	34.68	uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa]	[more]
TYK18079.1	4.7e-88	34.68	uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]	[more]

BLAST of Clc06G10010 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc06G10010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEX8	1.6e-89	35.40	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=...	[more]
A0A5A7TAA5	6.0e-89	35.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7THC0	1.3e-88	35.12	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3D3V4	2.3e-88	34.68	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TFP3	2.3e-88	34.68	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Clc06G10010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 472..559 e-value: 3.2E-11 score: 43.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 632..650
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 652..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 605..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..400
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 272..604
None	No IPR available	PANTHER	PTHR34482:SF18	RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATED	coord: 272..604
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 472..561 e-value: 2.7644E-20 score: 83.9251
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 271..326 e-value: 9.1E-7 score: 29.1
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 454..591 e-value: 2.3E-23 score: 84.4
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 467..567
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 483..494

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G10010.1	Clc06G10010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity