Clc06G09550 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTGCAACAAAGAGTGAAAAAACCTCAAATTCAAAGGGTAGACTAATTTTCATTTTCTCCTATTTTTTGGTCATTCATCTACCATACCCAAATTAAAAATTTATAGACACATTAAATAATTTTAAAGTTTAAATTTTAAATTCTATGAGAGGACAATTTAAAACTTTGAGACTAATAGTACAACTTTTAAAATTTATGAACCTCTCAGACAAAAAAATAAAAAATAAAAAAAATTCCTACAAGCTTGCATATTTTAAAAATGACACCTACCTAAAACCTCATGAAATAAACTCCATATCATAACTAATAATTACATAATCACATGGAGTTTCAATAATAATTTTGTCCTTAATAATCTTGTAATATGTTCAAAGTCAAGTATTAATTATATATAATTTAATTTTAACACACTAGAGTTGAGTACACCTCAACTAACATATAATGCATTAGCGGTCAAAAAGTTTATGGTTCGACCCTCTTGCTCCTATTGTACGTAAAAAAAATCAATACACGTTAGTGAAAAATTCATTTAAATTTGTAGATTGTTGAACAAATTGTAATTGACCCCAACCATAGAAAGTTCATTTTAGGGCTCTTTCAATCACTTTTAAAACTAGACTAAACTAAAAGGTGGTTGTTTTTAAGTACACTTTATGCACAGTCTTGGTGAATTGCTACTAATAGTGCATACACAAAGCTCCCTATTTGTACTGCAAGCAGCAATAATCTATGGATGGGCATAGAAATGTTCAAATTAAAGCAAAACAGGATAATTATTATTTTCAGTCTTAGTCCCAGATTTCAGGGTTCCTTAATTTGTTCAGAAAATTATACAAAGAAATAAACCATACGACAAATAATAGAGACTCACCCACTTTCTTCTAAAGGGGAATTAAATATTAGCCAACTGTTATATTGGAAGCCAGCCATTTAACACTTTACCGGTGCCATTCATTCATTTGCATTTCAAATTAAAAGCCCAATCCGTTTGTTTGGGATTTGAAAATCCCTGCGAGGGTCAAAAAAGCAAGGTTTTTCTTTGACCACAAACCTCTCTCTCTCTCTCTCTCTCTCTTCAGGTTTTTATAAGCAATTGCCCCTTGAAACTTGGAGACTGCCTTCTGTGACTTACTCACCAAGATACCCACATTCTAATTTCTCCTTATTCTCATCTTTGCTTTTTGTCAACTTTTTCTTCAAACCCTATTTCGAGCTTTTGGGTATATTCTTCTTCTGTTACCGAAAAATGAGTGCTTCAAGGTTTGTTAAATGTGTTACCGTTGGAGATGGAGCTGTTGGGAAAACTTGTATGCTCATCTGTTACACCAGCAACAAGTTCCCTACAGTGAGTTTTGTTTATACCCATCTTCCAAAATCACTCATTTTTCAAGTATTTTTCTTCCTTTTGTGTTATGAAATTGCATTTGTTCTGTTTTTGCAGGATTATATTCCTACAGTTTTTGACAACTTCAGTGCTAATGTGGCTGTGGATGGGAATATTGTCAACTTGGGATTATGGGACACTGCTGGTAAAATGGGGTTCCCTTTTCTTAGCCTGCTTGCTTCTAATGGATTGTTTTTCTCTGAGTTTGGAATATTTTGCTCTGTTTTGAAAGGTCAAGAAGATTACAGCAGACTTAGACCACTGAGTTATAGGGGAGCAGATGTTTTTGTTCTGGCTTTCTCGTTGATCAGTAAGGCTAGTTATGAGAATGTTCTCAAAAAGGTAGATGGTGGCAAAAGAACACTTGTTCCAATGTTTGTACAATAGAGTTTTTGTTCTAATATTACTTGGATGAACTGAAGTTCAGCTTATGTTTCTCAGTGGATGCCAGAACTTAGACGATTTGCCCCTAGTGTTCCTATTGTTCTAGTTGGCACAAAGTTGGGTAAGTTAAACAACTTCCAATTAGTTTTGACAGTCATCTTCTCTTTTGGAGCAGTGTATTGAGATAGTTTTATTTTCCTTAGATCTTCGTGACAATGGAGCTTATTCTACGGATCACATGGGATCAAACACAGTGACATATTCTCAGGTACCCTTGAAAGTCAATTCCTGTTTCTGCATTTGCCCAATAAAAAAGCTGCTCTGGAGATGGTTTATTTATTTTCATTTTTTTTTAAAATTACAGCTTCCATCCTTAAAGTTTGTTATTCGTATCTATTTAATCCATAAACTTTCAAAAATATTTCACAAGTCTTTGATCTTTTAGCATTTTTTTTTTTTATACTTTTGAAAGTTCATGGACCAAATAAACAAAAACTTGTACTCATTTTCTAGAAGAATACTCATTTAGTTGATTTCATGCAGGGAGAAGAGCTTAGGAAACAAATTGGTGCTGCTGCATACATTGAATGTAGCTCTAAGACTCAACAGGTAAATGTCTTTCATAAATTGAGGGCCCATTTGGATTGACTTGAGAAAAAAGTGTTTTTGAAGAAACTCATTTTTATTTAAACTCTTCTGATAAAAACTATTGAAAATACACTTCAAAGTCTATTTTGAGTGGTTGCCACACACTTCAATTTTTTCCAAAATGACTTATTTTTAAATTAAACACTTGAAAATGCATTCCAAACTCACTCTAAGACTCCATTCTAAGCCAAGTGTCCATATCGGACATAACCACGTTCAGGGATGCTCCGGACGCGTATCTGACACAAATTTTTTATGTCCTATATTTATTTATTTATTTATTTTAAGCTTTAGACACGTGGGGACACATTTGGGACTCATCGTGGACACGCACGAGAAATTTTTGTAAGAGAAAATAGTGTTAAACCAAGATAAAAAGAAAAAAAAGAAAAGAAAAGAAAGGAAGACTATTTTGTTAACCAAAGAAAACAAGCATAAACATAAAATTTCATCTCTTATCTCTTATAATCGTTAATTAACTTGACATTGTTATAAAACAACAATAAAAAAGAGTGAATCCTCAACATGTCCGCATCCTAATGTTTTGAAATTGGCATATCTTCGTGTCACGTCGTGTCATATTCATGACTGTGCTTAGTTCATAAACTTGGGATTTGAAAGACTTTATTACCTCTCTTTTCCCTTTCTTAATATGGAGGTCAAAAACTCATCACCACATGCATTAAAAGTACTGAACTATAATTTTTGTTTAGAATGTCAAAGCTGTTTTTGACACTGCAATCAAGGTTGTTCTACAACCTCCAAGGAGGATCGAGATGACTAAGAAGAGGAGCCGAAGGTCTGGTTGCTCAATTGTGTAAGTACATACATAAGAAATGATTCCTTGGATATGGCTTATGATCATTCTTTCACTTTAAAATATATGTATTGGGAGGAGAGTTTGGGGCTATCTCATGATCTTGCATGCTTGTATGCAGCAGGTGCATTGTGTGTGGTGGCTGTGCTGTGTAA ATGCGTGCAACAAAGAGTGAAAAAACCTCAAATTCAAAGGGTTTTTATAAGCAATTGCCCCTTGAAACTTGGAGACTGCCTTCTGTGACTTACTCACCAAGATACCCACATTCTAATTTCTCCTTATTCTCATCTTTGCTTTTTGTCAACTTTTTCTTCAAACCCTATTTCGAGCTTTTGGGTATATTCTTCTTCTGTTACCGAAAAATGAGTGCTTCAAGGTTTGTTAAATGTGTTACCGTTGGAGATGGAGCTGTTGGGAAAACTTGTATGCTCATCTGTTACACCAGCAACAAGTTCCCTACAGTGAGTTTTGTTTATACCCATCTTCCAAAATCACTCATTTTTCAAGTATTTTTCTTCCTTTTGTGTTATGAAATTGCATTTGTTCTGTTTTTGCAGGATTATATTCCTACAGTTTTTGACAACTTCAGTGCTAATGTGGCTGTGGATGGGAATATTGTCAACTTGGGATTATGGGACACTGCTGGTCAAGAAGATTACAGCAGACTTAGACCACTGAGTTATAGGGGAGCAGATGTTTTTGTTCTGGCTTTCTCGTTGATCAGTAAGGCTAGTTATGAGAATGTTCTCAAAAAGTGGATGCCAGAACTTAGACGATTTGCCCCTAGTGTTCCTATTGTTCTAGTTGGCACAAAGTTGGATCTTCGTGACAATGGAGCTTATTCTACGGATCACATGGGATCAAACACAGTGACATATTCTCAGGGAGAAGAGCTTAGGAAACAAATTGGTGCTGCTGCATACATTGAATGTAGCTCTAAGACTCAACAGAATGTCAAAGCTGTTTTTGACACTGCAATCAAGGTTGTTCTACAACCTCCAAGGAGGATCGAGATGACTAAGAAGAGGAGCCGAAGGTCTGGTTGCTCAATTGTCAGGTGCATTGTGTGTGGTGGCTGTGCTGTGTAA ATGCGTGCAACAAAGAGTGAAAAAACCTCAAATTCAAAGGGTTTTTATAAGCAATTGCCCCTTGAAACTTGGAGACTGCCTTCTGTGACTTACTCACCAAGATACCCACATTCTAATTTCTCCTTATTCTCATCTTTGCTTTTTGTCAACTTTTTCTTCAAACCCTATTTCGAGCTTTTGGGTATATTCTTCTTCTGTTACCGAAAAATGAGTGCTTCAAGGTTTGTTAAATGTGTTACCGTTGGAGATGGAGCTGTTGGGAAAACTTGTATGCTCATCTGTTACACCAGCAACAAGTTCCCTACAGTGAGTTTTGTTTATACCCATCTTCCAAAATCACTCATTTTTCAAGTATTTTTCTTCCTTTTGTGTTATGAAATTGCATTTGTTCTGTTTTTGCAGGATTATATTCCTACAGTTTTTGACAACTTCAGTGCTAATGTGGCTGTGGATGGGAATATTGTCAACTTGGGATTATGGGACACTGCTGGTCAAGAAGATTACAGCAGACTTAGACCACTGAGTTATAGGGGAGCAGATGTTTTTGTTCTGGCTTTCTCGTTGATCAGTAAGGCTAGTTATGAGAATGTTCTCAAAAAGTGGATGCCAGAACTTAGACGATTTGCCCCTAGTGTTCCTATTGTTCTAGTTGGCACAAAGTTGGATCTTCGTGACAATGGAGCTTATTCTACGGATCACATGGGATCAAACACAGTGACATATTCTCAGGGAGAAGAGCTTAGGAAACAAATTGGTGCTGCTGCATACATTGAATGTAGCTCTAAGACTCAACAGAATGTCAAAGCTGTTTTTGACACTGCAATCAAGGTTGTTCTACAACCTCCAAGGAGGATCGAGATGACTAAGAAGAGGAGCCGAAGGTCTGGTTGCTCAATTGTCAGGTGCATTGTGTGTGGTGGCTGTGCTGTGTAA MRATKSEKTSNSKGFYKQLPLETWRLPSVTYSPRYPHSNFSLFSSLLFVNFFFKPYFELLGIFFFCYRKMSASRFVKCVTVGDGAVGKTCMLICYTSNKFPTVSFVYTHLPKSLIFQVFFFLLCYEIAFVLFLQDYIPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISKASYENVLKKWMPELRRFAPSVPIVLVGTKLDLRDNGAYSTDHMGSNTVTYSQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRIEMTKKRSRRSGCSIVRCIVCGGCAV Homology
BLAST of Clc06G09550 vs. NCBI nr
Match: XP_038879458.1 (rac-like GTP-binding protein ARAC7 [Benincasa hispida]) HSP 1 Score: 392.5 bits (1007), Expect = 3.4e-105 Identity = 203/242 (83.88%), Postives = 206/242 (85.12%), Query Frame = 0
BLAST of Clc06G09550 vs. NCBI nr
Match: XP_023530838.1 (rac-like GTP-binding protein ARAC7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 388.7 bits (997), Expect = 4.9e-104 Identity = 202/242 (83.47%), Postives = 203/242 (83.88%), Query Frame = 0
BLAST of Clc06G09550 vs. NCBI nr
Match: XP_004142514.2 (rac-like GTP-binding protein ARAC7 isoform X1 [Cucumis sativus] >KAE8653634.1 hypothetical protein Csa_007217 [Cucumis sativus]) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103 Identity = 200/242 (82.64%), Postives = 204/242 (84.30%), Query Frame = 0
BLAST of Clc06G09550 vs. NCBI nr
Match: XP_008462739.1 (PREDICTED: rac-like GTP-binding protein ARAC7 [Cucumis melo]) HSP 1 Score: 386.7 bits (992), Expect = 1.8e-103 Identity = 199/242 (82.23%), Postives = 204/242 (84.30%), Query Frame = 0
BLAST of Clc06G09550 vs. NCBI nr
Match: XP_023005619.1 (rac-like GTP-binding protein ARAC7 [Cucurbita maxima]) HSP 1 Score: 386.0 bits (990), Expect = 3.2e-103 Identity = 200/242 (82.64%), Postives = 203/242 (83.88%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy Swiss-Prot
Match: O82480 (Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana OX=3702 GN=ARAC7 PE=1 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 3.1e-93 Identity = 181/241 (75.10%), Postives = 192/241 (79.67%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy Swiss-Prot
Match: Q68Y52 (Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC2 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 4.6e-89 Identity = 171/243 (70.37%), Postives = 192/243 (79.01%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy Swiss-Prot
Match: Q9SSX0 (Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC1 PE=1 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.5e-84 Identity = 159/236 (67.37%), Postives = 180/236 (76.27%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy Swiss-Prot
Match: Q6Z808 (Rac-like GTP-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC3 PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-82 Identity = 155/230 (67.39%), Postives = 172/230 (74.78%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2) HSP 1 Score: 302.4 bits (773), Expect = 6.0e-81 Identity = 154/231 (66.67%), Postives = 175/231 (75.76%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy TrEMBL
Match: A0A1S3CHP6 (rac-like GTP-binding protein ARAC7 OS=Cucumis melo OX=3656 GN=LOC103501028 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 8.9e-104 Identity = 199/242 (82.23%), Postives = 204/242 (84.30%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy TrEMBL
Match: A0A6J1KZS1 (rac-like GTP-binding protein ARAC7 OS=Cucurbita maxima OX=3661 GN=LOC111498552 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.5e-103 Identity = 200/242 (82.64%), Postives = 203/242 (83.88%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy TrEMBL
Match: A0A6J1F5W0 (rac-like GTP-binding protein ARAC7 OS=Cucurbita moschata OX=3662 GN=LOC111441118 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 2.6e-103 Identity = 200/242 (82.64%), Postives = 202/242 (83.47%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy TrEMBL
Match: A0A5A7V4U4 (Rac-like GTP-binding protein ARAC7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001070 PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 8.4e-102 Identity = 198/242 (81.82%), Postives = 203/242 (83.88%), Query Frame = 0
BLAST of Clc06G09550 vs. ExPASy TrEMBL
Match: A0A6J1CUR2 (rac-like GTP-binding protein ARAC7 OS=Momordica charantia OX=3673 GN=LOC111014457 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.7e-99 Identity = 194/242 (80.17%), Postives = 198/242 (81.82%), Query Frame = 0
BLAST of Clc06G09550 vs. TAIR 10
Match: AT4G28950.1 (RHO-related protein from plants 9 ) HSP 1 Score: 343.2 bits (879), Expect = 2.2e-94 Identity = 181/241 (75.10%), Postives = 192/241 (79.67%), Query Frame = 0
BLAST of Clc06G09550 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 ) HSP 1 Score: 298.9 bits (764), Expect = 4.7e-81 Identity = 151/231 (65.37%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Clc06G09550 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 ) HSP 1 Score: 298.9 bits (764), Expect = 4.7e-81 Identity = 151/231 (65.37%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Clc06G09550 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 ) HSP 1 Score: 298.9 bits (764), Expect = 4.7e-81 Identity = 151/231 (65.37%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Clc06G09550 vs. TAIR 10
Match: AT3G48040.1 (RHO-related protein from plants 10 ) HSP 1 Score: 297.7 bits (761), Expect = 1.1e-80 Identity = 157/237 (66.24%), Postives = 176/237 (74.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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