Clc06G07800 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G07800
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit B
LocationClcChr06: 8503140 .. 8507044 (+)
RNA-Seq ExpressionClc06G07800
SyntenyClc06G07800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAGAACAACCAAAGCTGAAGAGAAGAAGAGGAGCAGCAGTTGAATTGAGTTGAAGAATTTCCCTTGAAACATAAATACGTCTTCTTGACTTTCGATTTCAGAGAGAAGAGTTTCTACACGAATCTCCTCCCATTTTCCCCAATTACCCACTAACTTATTTTCTTCATTTTTTGAAAAGCATCGCCATCATCAGCTCCAGAATTCTCTGGTGTTGCTTCTAATTTCTTCAGCTTCGATGTAAACAGCTGAATGGGTATTTGGGAAACCAAAGGGAATATCGATTGAGAGTTTCGGTAGAAGAAGAAAATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATAGTTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACTCTCCTCAACAAATCCCAATTTGGGTTTGTCTTCTCACCTCCTCTTTACTTTTCCCAATTTCTTTTGTAAATTCATTATGAAGTAATCCAAGTATTTGTTGGGGGATTAATGGAATTATGTGGGATTTTCCTTAGCTTTGAGTTTTGTTTCCATGAGATGATAAAGTGATTGTTTGAACTGCATATTGCTTGTTGGCGATTGATTAGTTGAGGATTAAGGTGTCATATATGTACCACCAGGAAACAAGAAATTGCATCTTTGATATCTTAAAATGGTAATCGTTGAACCCAGTTCCCAACATTTACTTTCCACTGTTGTGATCAAATCACTTTGACCTCTCCTAGCTGTCATTGTAAATCGCCAAGGGTCTGTATTAGAGATGGACTGGATATATCATTATTGCAATTTTGGATATCCTGGAAAGTCCAGACTCTATCAAATATCATAAGCACCTGAAATTTTCTGTTGGCAATGGCAACTGTTGTTTTGATTATCAATAGTCCAGAATTGGTGTCTAAGACTTGTTTTTCTTCTTGTAACAAGAAACAACTTTGATGATAATATGAAAAGCAAATGTTCAGGAAACAAACTCCCAAGTGAGTGAGATGAAAAAGAAAAACCTTGGTGTCAACCTCTGTTATTTGCATTATTTGGCTTTCCTGAAAATTCCGACTCTATCAATTGGCATTTGTACCTGGGATTTTCTGTTCTTAAATATTGTATTTTTGGATTAAATTTTCTTGCAGAGATTTCCTGTAAAGTTGAGTGAAGATGATTTTATTTGGGAAAGAACAATTGTAACATCAAGTTTCAGTGTTTTCTCCCATTTCTTCTGTTATAAAATGGGTTGCTATTGGAATGGAACATTATTTTTATGTATTCTTAGTAGTCCAAATTTTTAGAGTGTCGTATTGTATTGCCTTTCTTTACTTGAGATAACAGGTAGAGACCTCAGAAGATTGTGACGGGAACTAATATCTTCTTTCACAAAAAAAAAAGAGAGAAAGAAAGTGGGGAACATAGTTAGTCCGTTACTTGTATGCTTCCAAACTGATTGAAACCTTACTCAAAGGTGAGAGGGAGACAATGATCTAAAACTGACCCCCCTACAAAAAAAGAGTTGGAAATGAAATAGGATTCCCTCCTTTCATGCTTTAAGCAATCAATTGAGGTTCTTAAAAGGTACAAGTTTAGTTCTCATGGTGGACCATTATCTTGCCATGTGCGGAAGCTTAAACTTTCGAACTTTTCCTACCATTGTTATGCCTTTACATTTCACATCAAGTCTTATAACTTGCCATTATGTGATGCAATAGATACTTTGTTTTCTGTATAATTGGATCATTTTTGATTTCATCACATATTCTTGGAAAATCTAAAGAATTCACAATAGTTTAAGCAATTCTGCAGCTCTTGCTGTTCCTCCCCATTTGAGTTCTGAAAAGCTTGAAGGAAAGAACAAGCATAATTTTTGCCCTGATTGTTTGGTATCACTCTTGACCTGGTAATAAATTTATGTAGTACTCCAGGCATTATTTAGATTAATGTTTTAACATTTGAAACATTACTAAGCTTCTAATGGACTTATTCTCTGAACTTTGCTGTGGGAAAAAATTGTTGTCTGAATTTGGTGTTCGGCCCTCCTTTGATTATGCTCTCTACTTTCTGGCTGTTGCTGGTTGTGTGACTCAACTAGATTGCTAACTCAGATAGTGTGTGAAAATTCATACTGCAGATCAACTCAAATATATCAGGGAATCTGAAGAGATTCGACTTTCCATGCAGCCTTTGGAACTGATTAAAAGGGTAAGCACTTCATCAAGTATATCCTACAACCCATCAAAACATAAGACAGAAGGACATGTTTGAGTGTGATTTTGAAATAGTTAAAATCACTTTTGTCATTTTCAAAATCACTATAAAATACGATTTTAATGATTTAAAACCAATGTTGATTATATAAAAATTGCATTTAAAAGTGTAAAATTAAATATTAACTTAATTTTCGGTGATTAAAGATGGATTTTGAAGTGATTTTGAACATGACAAAAGTGGTTTTAACAATCCCAAAATCATTCTCATAGATGCACTAAGTCTCATGAGTAAATGTCAATTCTACATGGTAGTTCCAAGAAAATAAAAACCAAACCTCTCAAGAAAAAGGACAAAATAAAGAAACAACGACTGAAAAATAGACTAAGCAAACTTAATAACTTGAATTAACTGGCTGAGATGATTTGGTTTAATCAGTTTGTTTTGTTTTAGTTTCCACCCTGGTGTCAATGCACAGTTGAAATTTTCTTTTGCATTGAAGTTCAAACTTTCATAAGTGTCTTCACTCTTCAGGTAAGGGAAATTCAGCAGGAAGCATATTATGGAACACAAGATGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAACGATGCTTCCAGCTTAAAGGGTACCATTTTTCTGCTCCGAAATCTTCTCCCTCCCAGCCCCACCATCCTTCCTATGTACCAGCCATAATCAAAACCACTGAATTGGTTTAGTTTATCTTAATCTCCTACACTCTGAGGTTTATGTCTATTTGATTTCCATACTTTCAATTTTCAAACTTAATCCCTCTAAGCAGTTCAATTTTTTTAAAAATTTGTGCATTTAATTTTCCAATTAGTTTTTTAAAAATTTCAAATGGTCAAAGACTTATTAGACACAAAAGTGAAAGGTTAGAAACCTGTTAAACACTTTTAAAGTTATCTCAAAGTTCAAGGGCTAAACTTGCAATTTAACCAATATAAAATCAAACACTATCAATTTAGTTTGATAGCTTTTTCAACCCTGATTTGGTGGATGGTTTTGTTGGCTTCTACCAGTTTAATCAGTTCAGCAATTGGGGTAGGAGGATTCCAACCATAGATCATGTAGTTACTAACACACTCGTATGTCAATTGAGCTCTGCTCGGTTAGGCTAATTAGTTCAGTAATTCCATTTCAACTTTGGATATATATATTTTTTTCTCCTTAAACCAATAATCAGTTTGATGTTGATTCAAACCAAAAAAAACCAAGTTGAATCGACTTGCTTACAATCGAACCATCGTCCTGAGTCTCATCTAATATAATGTGAATGGTTTGTGACACAGCTATTGAGGAATGGCGCAAACGAAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTTCTTCTCAGCCTCGAAAACACAACTTCTAAATCTGTATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTGATTCTAAAGTGAAAAGCATCATATCTCTTCTTTTTACATATGACTACCCTTTTATAAAAACAGAGTTTGAGTGACTCAGAAGCTCAAAGTTTATTATATATATTAAATTTGTACAACAAATGTCTATGGACAACATGTGAT

mRNA sequence

ATAAGAACAACCAAAGCTGAAGAGAAGAAGAGGAGCAGCAGTTGAATTGAGTTGAAGAATTTCCCTTGAAACATAAATACGTCTTCTTGACTTTCGATTTCAGAGAGAAGAGTTTCTACACGAATCTCCTCCCATTTTCCCCAATTACCCACTAACTTATTTTCTTCATTTTTTGAAAAGCATCGCCATCATCAGCTCCAGAATTCTCTGGTGTTGCTTCTAATTTCTTCAGCTTCGATGTAAACAGCTGAATGGGTATTTGGGAAACCAAAGGGAATATCGATTGAGAGTTTCGGTAGAAGAAGAAAATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATAGTTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACTCTCCTCAACAAATCCCAATTTGGCTCTTGCTGTTCCTCCCCATTTGAGTTCTGAAAAGCTTGAAGGAAAGAACAAGCATAATTTTTGCCCTGATTGTTTGGTAAGGGAAATTCAGCAGGAAGCATATTATGGAACACAAGATGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAACGATGCTTCCAGCTTAAAGGCTATTGAGGAATGGCGCAAACGAAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTTCTTCTCAGCCTCGAAAACACAACTTCTAAATCTGTATGAACTTTCTTTGTACCTTGTATAACAAACTTGTCTATGTGATTCTAAAGTGAAAAGCATCATATCTCTTCTTTTTACATATGACTACCCTTTTATAAAAACAGAGTTTGAGTGACTCAGAAGCTCAAAGTTTATTATATATATTAAATTTGTACAACAAATGTCTATGGACAACATGTGAT

Coding sequence (CDS)

ATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTTAGGAATGCGACCATAGTTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGCTGCTTCTTCCCGCAACAGACTCTCCTCAACAAATCCCAATTTGGCTCTTGCTGTTCCTCCCCATTTGAGTTCTGAAAAGCTTGAAGGAAAGAACAAGCATAATTTTTGCCCTGATTGTTTGGTAAGGGAAATTCAGCAGGAAGCATATTATGGAACACAAGATGTACAAGAAAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAACGATGCTTCCAGCTTAAAGGCTATTGAGGAATGGCGCAAACGAAAGATGGAAAGAGCAAGACTGCGTGAAATGGAGAAAAATGGGACACTGAGTTCTTCTTCTCAGCCTCGAAAACACAACTTCTAA

Protein sequence

MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFRSLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF
Homology
[Close]
BLAST of Clc06G07800 vs. NCBI nr
Match: XP_038874445.1 (uncharacterized protein LOC120067104 [Benincasa hispida] >XP_038874446.1 uncharacterized protein LOC120067104 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 6.4e-52
Identity = 126/164 (76.83%), Postives = 133/164 (81.10%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LCLLNLVA FLLLQGFLSAASSRNR SSTN NL        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAVFLLLQGFLSAASSRNRPSSTNLNLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           +    LS + LE   +        VREIQQEA+Y T+DVQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  SEEIRLSMQPLELIKR--------VREIQQEAHYETEDVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF 159
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTLSSS QPRKHNF
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLSSSYQPRKHNF 156

[Close]
BLAST of Clc06G07800 vs. NCBI nr
Match: XP_022138362.1 (uncharacterized protein LOC111009555 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 3.9e-49
Identity = 118/162 (72.84%), Postives = 129/162 (79.63%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHL 60
           MEVQQ WRLRFSF+NATI +CLLNLVAAF LLQGFLSAASSRNR SSTNP+L        
Sbjct: 1   MEVQQPWRLRFSFKNATIAMCLLNLVAAFFLLQGFLSAASSRNRPSSTNPSLG------- 60

Query: 61  SSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFRS 120
             + +    +  F    L     VREI++EA+Y T+ VQEKDSKQNAAIDLSKRLKDFRS
Sbjct: 61  QLKYIRESEEIRFAMQPLELIKRVREIEREAHYETEVVQEKDSKQNAAIDLSKRLKDFRS 120

Query: 121 LNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           LNDASSLKA+EEWRKRKMERARLREMEKNGTLSS SQPRKHN
Sbjct: 121 LNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN 155

[Close]
BLAST of Clc06G07800 vs. NCBI nr
Match: TYK16764.1 (uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 3.3e-48
Identity = 121/163 (74.23%), Postives = 129/163 (79.14%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLSAASSR+R  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of Clc06G07800 vs. NCBI nr
Match: XP_004147168.1 (uncharacterized protein LOC101209470 [Cucumis sativus] >KGN61556.1 hypothetical protein Csa_006544 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 4.3e-48
Identity = 120/164 (73.17%), Postives = 129/164 (78.66%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLS ASSRNR  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAA+DLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF 159
           SLNDASSLKA+EEWRKRKMERARLRE+EKNGTL+S SQ RKHNF
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]
BLAST of Clc06G07800 vs. NCBI nr
Match: XP_008460696.1 (PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo] >KAA0031943.1 uncharacterized protein E6C27_scaffold134G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 9.6e-48
Identity = 120/163 (73.62%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match: A0A6J1CAW5 (uncharacterized protein LOC111009555 OS=Momordica charantia OX=3673 GN=LOC111009555 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.9e-49
Identity = 118/162 (72.84%), Postives = 129/162 (79.63%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHL 60
           MEVQQ WRLRFSF+NATI +CLLNLVAAF LLQGFLSAASSRNR SSTNP+L        
Sbjct: 1   MEVQQPWRLRFSFKNATIAMCLLNLVAAFFLLQGFLSAASSRNRPSSTNPSLG------- 60

Query: 61  SSEKLEGKNKHNFCPDCL-----VREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFRS 120
             + +    +  F    L     VREI++EA+Y T+ VQEKDSKQNAAIDLSKRLKDFRS
Sbjct: 61  QLKYIRESEEIRFAMQPLELIKRVREIEREAHYETEVVQEKDSKQNAAIDLSKRLKDFRS 120

Query: 121 LNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           LNDASSLKA+EEWRKRKMERARLREMEKNGTLSS SQPRKHN
Sbjct: 121 LNDASSLKALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN 155

[Close]
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match: A0A5D3D0K8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00180 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 121/163 (74.23%), Postives = 129/163 (79.14%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLSAASSR+R  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match: A0A0A0LNL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169800 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48
Identity = 120/164 (73.17%), Postives = 129/164 (78.66%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LCLLNLVAAFLLLQGFLS ASSRNR  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAA+DLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHNF 159
           SLNDASSLKA+EEWRKRKMERARLRE+EKNGTL+S SQ RKHNF
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match: A0A5A7SNT0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00220 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.6e-48
Identity = 120/163 (73.62%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match: A0A1S3CD43 (uncharacterized protein LOC103499464 OS=Cucumis melo OX=3656 GN=LOC103499464 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.6e-48
Identity = 120/163 (73.62%), Postives = 128/163 (78.53%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNL------AL 60
           MEVQQSWRLRFSFRNATI LC LNLVAAFLLLQGFLSAASSR+R  STN  L        
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AVPPHLSSEKLEGKNKHNFCPDCLVREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFR 120
           A    LS + LE   +        VREIQ+EAYY T+ VQ+KDSKQNAAIDLSKRLKDFR
Sbjct: 61  AQEIRLSMQPLELIKR--------VREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFR 120

Query: 121 SLNDASSLKAIEEWRKRKMERARLREMEKNGTLSSSSQPRKHN 158
           SLNDASSLKA+EEWRKRKMERARLREMEKNGTL+S SQ RKHN
Sbjct: 121 SLNDASSLKALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of Clc06G07800 vs. TAIR 10
Match: AT1G04555.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33380.1); Has 84 Blast hits to 83 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30
Identity = 78/153 (50.98%), Postives = 107/153 (69.93%), Query Frame = 0 

Query: 3   VQQSWRLRFSFRNATIVLCLLNLVAAFLLLQGFLSAASSRNRLSSTNPNLALAVPPHLSS 62
           +   WR+RFSF+NATI L ++N++    LLQGF +++SS +  SS+   ++  +     +
Sbjct: 1   MDHQWRMRFSFKNATIALTVINVLIFLFLLQGFFTSSSSPSSSSSSRRLISAQLRYIKEA 60

Query: 63  EKLEGKNKHNFCPDCL---VREIQQEAYYGTQDVQEKDSKQNAAIDLSKRLKDFRSLNDA 122
           E+L  K +    P  L   VREI+QEA  G +  Q+KD KQ  A+DLSKRLKDFR+LNDA
Sbjct: 61  EELRLKMQ----PLELIRRVREIEQEASAGQETEQQKDVKQTTAVDLSKRLKDFRALNDA 120

Query: 123 SSLKAIEEWRKRKMERARLREMEKNGTLSSSSQ 153
           SSLKA+EEWRKRKMERAR R++EK G +SSS++
Sbjct: 121 SSLKALEEWRKRKMERARQRDLEKTGGVSSSTK 149

The following BLAST results are available for this feature:
BLAST of Clc06G07800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038874445.16.4e-5276.83uncharacterized protein LOC120067104 [Benincasa hispida] >XP_038874446.1 unchara... [more]
XP_022138362.13.9e-4972.84uncharacterized protein LOC111009555 [Momordica charantia][more]
TYK16764.13.3e-4874.23uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa][more]
XP_004147168.14.3e-4873.17uncharacterized protein LOC101209470 [Cucumis sativus] >KGN61556.1 hypothetical ... [more]
XP_008460696.19.6e-4873.62PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo] >KAA0031943.1 unc... [more]
BLAST of Clc06G07800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc06G07800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CAW51.9e-4972.84uncharacterized protein LOC111009555 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A5D3D0K81.6e-4874.23Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LNL12.1e-4873.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169800 PE=4 SV=1[more]
A0A5A7SNT04.6e-4873.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CD434.6e-4873.62uncharacterized protein LOC103499464 OS=Cucumis melo OX=3656 GN=LOC103499464 PE=... [more]
BLAST of Clc06G07800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04555.13.3e-3050.98unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33344:SF7TRANSMEMBRANE PROTEINcoord: 6..149
NoneNo IPR availablePANTHERPTHR33344OS02G0761600 PROTEINcoord: 6..149

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G07800.2Clc06G07800.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane