Clc06G06410 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCACACATGTTTATCCAAGCGCGTTATCTCTTGCCCATTTTCCTATATATAATGCTACTCCTTCTCCCCCCCTTCTTCGCTCTCTCTGTTTTTCTATTGCTCCTTCTTCCTCTCTGTTTTCCTCATTTTCTCTCTGTTTTCATCCATGGCTTCTTCTTTCGACTGCCTCATTTTCGGTATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCATTTCCAAGATTTGAAGGTTCAAGATTTTGTGACTCTGTTTTTTTTTTTTCTTTTTCATACAGACTTAGATGATACTCTGTACCCATTCAACACTGGAATTGCTGCTGCTTGCAAGAAAAACATTGAAGGTCTCAAACAACCGTTTAATTTTCACTTGAAGACTGTATTATTAGTGTGTAATCAATAGGATTTTTAGGGTTTAATTTGAGTAGTGAAATTGGGTTTTTGACAGATTTTCTCATCGAGAAATGTGGATTCCCAAAAACCCAAGCTCCCATTCTTCGAACAGAGCTTTTTAAAACATACGGCAGCACCCTGGCTGGTTTGCGAGTAATTTCCTCATCATTAACAAATTAAAATCTTGATTACAAAATCCGTAGTTCTAAAACTATGTGCTAATTTTTCCTTTTGTAACAGGCATTGGGCTATGACATCAAAGCCGATGATTACCATGGGTAAGCTTTTATTAAATTAATAATTATTTAAATTGGAAAAAAGACAAGCGATGACTCGACAATTGTCCAATAGAAACGTAAAGTTTTGTTATTTATGGTTTGTTAGTTTCGTGCACGGGAGGTTGCCGTACGATCGGATCAAACAAGACTTTCAGCTCCGGCGCCTCTTACTCACCATTCCTCAAAGAAAAATCGTAAGTTCAAGTCACGACTTATAGATCAAACTTTTTCTTTCCTCTTTTATACATTTTTTCAAAAAGAATAATAAATTTAGACACTTCACCGTTGTTTATTTTTGAAAATAACGAACGCATCAATTCTGAAAACTTTGCCAAATATGAGTTTATAAAATGAACTATTAGAATTGATACATGGTCACACTCTAAATGAAATATAAACTAAAAATTTAAACTAATAATTTATAAAAATTTAGAGACTCAATTGATATAATTATAAGTCTTACATAACGTTATACTGAGCATAAATAGATACATTTATAAAAATTTAGAGTTTAATTTAATATGATGATTAGTTTAAACCAAAATTTAGAAATATAAATTCGTGTTATTGTAAGTGTTAATTACTTGTTGGATGGATGGGTAGATATTCACAAACTCCGATATGAATCACGCAACTGAAGTGCTGGGCCGACTCGGTTTAGAGGATTGTTTTGAGAAGATCATATGTTTCGAGACGATGAACCCAAATCTCCCAAAGGCGACTCGGCTGAACGAGTTTCCGATCCTTTTGAAGCCATCAATGGACGCCATGAGAATCGCTCTTGACGTCGCCGATGTTGACCCCCGTCGCACTGTAAGTCGTCGCATAGTAAAATTTGTGATTTTTTTTTTTTTTTCTTTTGTGAGGAAAGTCAGTTTCAACCACAGAGGTTTGTTTAGTTGTTTGTTGACTTTGTGTTGTCGTTGTTTGCAGTTGTTTCTTGACGACAACGTCCGCAACATCGCTGCCGGAAAAGCCCTCGGCCTCCGTACCGTTTTGGTAAGAAATTTCCTTTCCCCTGTCTTTTAAACGTGTTAAATTCCTATTTCCATACCTGCCCCGATTTTATTTTGTTGTGATGCTTAATTTCTATTTTACCAATTAATTTTTCTTCAAATATTTTTTTTTTAGTTTTTTTGCTTTTAAAATTGCCAAAATCATTAACTTAAAGCGTCTGTGTTTAGTAATAATTTAATATGTAATTAAAACAAAAAAGTCGTGTACTTAAAACTCTTCTCATGTAAATTTCTATCCAATTAATTCAAATTTATTGTAACCTTTTAGGGTTAATACTAATTTAACAAAAATATCTAATAAAACTTTCAACTTTTAATAAATTATCTTTTGAAAGCTTCTAACATATAAATTTTTTTTTTGGAGTTCATAAGTTCACTAAGATGCTTCATATACTCATTTCAAGGATCTCATTATTAAAAAATAAATAAATTTGATATTTGAAAGATCAATACAAAAAAAAAATTTCTTGTGAGACTTCTATCGTCTATCGTAGTTTATTACTCAGTGATAAAAGTCTATCACGATCTATCATTAATAGATAGTGACATTTTGTTATATTTATAAACATTTTCAACAATTTCTATCATTTAAAATAATTATCTTATAATTTATCTATATTTATGCCTTTTCCTATAAGCTACTTTGGAGTAGTTATTAACATTTTGTCTTTTTGAGAATAAGATAAAAAATTGATAAGTTATTTAAATAATGAAGATGCTAAATTATTACATTGATATGCAAGTAATTTTGATATTATAAGTGATCAAGAAGTTGTCTAACAGCTTTCCTTCCTTTAATTTGTGTGTAGTGGAAAGTGAATTTATTACAATTAATGAAAAAAAAAAAAGAAAAAGCCATTTTTGAAACGACACGTGGCATCTACTCGTTTGTTATTCCAAAAGTACGGCTTATCCTAAATATTTTTTACGGATCTCAATCCAAATAGTGGAGCCACGTCATCTATATCCACTCGAAAGATAATTTTAAATTAAATTTAAATTACAAAAGGATTTTCTTCTTCTTATGGGAAAAAATTAAAATTTTATAACAAAAAAAAAAAAAAAATCATCATATCAAACCAAAATTAAATGGTTAAATAAAACACTATTAGGTTGATGAACTTTAAGAATGTAAAATATATTCTTCATTTTTTGAAATTTTTATCTAATAATTATTTACGTGTTCAAAATTTTTAAATATCAACTAAGTGAATAAATATAAAATTAGATTATATGTTTAATTTAAAGTTTGAACTTTCATTATTCTTTTTTCCTTTTATACATCCTTAGATTTTTTTAAAAAATGTTGAATTTGTTGCCGATTTGTAAAACATAAAATTGAAGGTTAATTAAAAACTTATTAAATGTTTTTTAAAATTCGATTTGACTTGTTGAATACTAAGTTGGAACTTTTGAACCAAATAAGTAGACAATTGTAATATAATATAAACTAATAATATTTAGTGAAAAATTTTAAATTGTTGGAAATGTAATTTATATGGTGTTGTGTTTTTTATATAAATGAAAGGTGGGGAAGACAGTGAAAAGTAAGGAGGCAGATTACGTGGTGGAGACTGTGCATAATCTGGTACAAGCAATTCCAGAGATATGGGTGAACAAAGAATCGAACGGTAATGATGAAATGATCAATCGAAGCCGAAATGACGTAGATTCCGTTCTCATGGCAACACCCGTGGGCGCTTAAATTATTTTTGATGAAATCCGGTTTTGTACATAAGTGATCGATTTGATCAAATGTATAAACCCTTAGTAGTACTAATAAGTAAGTAGGGTGTTAATGAATGTACAAAATCCTTTTCCCCAATACAACGGTGGCATACGGAAATAAGTATATACAAATATATTTTCAATAATTTTTTTTCTCTGCCAATAAGAATTAATTTTAAATTTCTTTGCATCGTCCCAAAAAAGAATCTTGTGGTATTATTTTGTTGTTCAACTTTCAAGTAGATGCTATTGTTTTTATTTGATTTTCCTTTTTCTAGTGATTTAAGTTTTACAAATATTTGAAAATAAAGTATGTATGAGAATAATATATTTGAGAATAAAAAATGATTGTAATTGGTTGAACATGAGAATGATAAACTAATCATTTTATAACCATTTGAAAACTAAAC TGTCACACATGTTTATCCAAGCGCGTTATCTCTTGCCCATTTTCCTATATATAATGCTACTCCTTCTCCCCCCCTTCTTCGCTCTCTCTGTTTTTCTATTGCTCCTTCTTCCTCTCTGTTTTCCTCATTTTCTCTCTGTTTTCATCCATGGCTTCTTCTTTCGACTGCCTCATTTTCGACTTAGATGATACTCTGTACCCATTCAACACTGGAATTGCTGCTGCTTGCAAGAAAAACATTGAAGATTTTCTCATCGAGAAATGTGGATTCCCAAAAACCCAAGCTCCCATTCTTCGAACAGAGCTTTTTAAAACATACGGCAGCACCCTGGCTGGTTTGCGAGCATTGGGCTATGACATCAAAGCCGATGATTACCATGGTTTCGTGCACGGGAGGTTGCCGTACGATCGGATCAAACAAGACTTTCAGCTCCGGCGCCTCTTACTCACCATTCCTCAAAGAAAAATCATATTCACAAACTCCGATATGAATCACGCAACTGAAGTGCTGGGCCGACTCGGTTTAGAGGATTGTTTTGAGAAGATCATATGTTTCGAGACGATGAACCCAAATCTCCCAAAGGCGACTCGGCTGAACGAGTTTCCGATCCTTTTGAAGCCATCAATGGACGCCATGAGAATCGCTCTTGACGTCGCCGATGTTGACCCCCGTCGCACTTTGTTTCTTGACGACAACGTCCGCAACATCGCTGCCGGAAAAGCCCTCGGCCTCCGTACCGTTTTGGTGGGGAAGACAGTGAAAAGTAAGGAGGCAGATTACGTGGTGGAGACTGTGCATAATCTGGTACAAGCAATTCCAGAGATATGGGTGAACAAAGAATCGAACGGTAATGATGAAATGATCAATCGAAGCCGAAATGACGTAGATTCCGTTCTCATGGCAACACCCGTGGGCGCTTAAATTATTTTTGATGAAATCCGGTTTTGTACATAAGTGATCGATTTGATCAAATGTATAAACCCTTAGTAGTACTAATAAGTAAGTAGGGTGTTAATGAATGTACAAAATCCTTTTCCCCAATACAACGGTGGCATACGGAAATAAGTATATACAAATATATTTTCAATAATTTTTTTTCTCTGCCAATAAGAATTAATTTTAAATTTCTTTGCATCGTCCCAAAAAAGAATCTTGTGGTATTATTTTGTTGTTCAACTTTCAAGTAGATGCTATTGTTTTTATTTGATTTTCCTTTTTCTAGTGATTTAAGTTTTACAAATATTTGAAAATAAAGTATGTATGAGAATAATATATTTGAGAATAAAAAATGATTGTAATTGGTTGAACATGAGAATGATAAACTAATCATTTTATAACCATTTGAAAACTAAAC ATGGCTTCTTCTTTCGACTGCCTCATTTTCGACTTAGATGATACTCTGTACCCATTCAACACTGGAATTGCTGCTGCTTGCAAGAAAAACATTGAAGATTTTCTCATCGAGAAATGTGGATTCCCAAAAACCCAAGCTCCCATTCTTCGAACAGAGCTTTTTAAAACATACGGCAGCACCCTGGCTGGTTTGCGAGCATTGGGCTATGACATCAAAGCCGATGATTACCATGGTTTCGTGCACGGGAGGTTGCCGTACGATCGGATCAAACAAGACTTTCAGCTCCGGCGCCTCTTACTCACCATTCCTCAAAGAAAAATCATATTCACAAACTCCGATATGAATCACGCAACTGAAGTGCTGGGCCGACTCGGTTTAGAGGATTGTTTTGAGAAGATCATATGTTTCGAGACGATGAACCCAAATCTCCCAAAGGCGACTCGGCTGAACGAGTTTCCGATCCTTTTGAAGCCATCAATGGACGCCATGAGAATCGCTCTTGACGTCGCCGATGTTGACCCCCGTCGCACTTTGTTTCTTGACGACAACGTCCGCAACATCGCTGCCGGAAAAGCCCTCGGCCTCCGTACCGTTTTGGTGGGGAAGACAGTGAAAAGTAAGGAGGCAGATTACGTGGTGGAGACTGTGCATAATCTGGTACAAGCAATTCCAGAGATATGGGTGAACAAAGAATCGAACGGTAATGATGAAATGATCAATCGAAGCCGAAATGACGTAGATTCCGTTCTCATGGCAACACCCGTGGGCGCTTAA MASSFDCLIFDLDDTLYPFNTGIAAACKKNIEDFLIEKCGFPKTQAPILRTELFKTYGSTLAGLRALGYDIKADDYHGFVHGRLPYDRIKQDFQLRRLLLTIPQRKIIFTNSDMNHATEVLGRLGLEDCFEKIICFETMNPNLPKATRLNEFPILLKPSMDAMRIALDVADVDPRRTLFLDDNVRNIAAGKALGLRTVLVGKTVKSKEADYVVETVHNLVQAIPEIWVNKESNGNDEMINRSRNDVDSVLMATPVGA Homology
BLAST of Clc06G06410 vs. NCBI nr
Match: XP_038906989.1 (uncharacterized protein LOC120092836 [Benincasa hispida]) HSP 1 Score: 478.8 bits (1231), Expect = 3.0e-131 Identity = 235/257 (91.44%), Postives = 243/257 (94.55%), Query Frame = 0
BLAST of Clc06G06410 vs. NCBI nr
Match: XP_004140145.1 (uncharacterized protein LOC101214793 [Cucumis sativus] >KGN48008.1 hypothetical protein Csa_003887 [Cucumis sativus]) HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130 Identity = 233/257 (90.66%), Postives = 244/257 (94.94%), Query Frame = 0
BLAST of Clc06G06410 vs. NCBI nr
Match: XP_008449552.1 (PREDICTED: uncharacterized protein LOC103491402 [Cucumis melo]) HSP 1 Score: 463.8 bits (1192), Expect = 9.9e-127 Identity = 231/260 (88.85%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of Clc06G06410 vs. NCBI nr
Match: XP_022958953.1 (uncharacterized protein LOC111460088 [Cucurbita moschata]) HSP 1 Score: 452.6 bits (1163), Expect = 2.3e-123 Identity = 223/257 (86.77%), Postives = 237/257 (92.22%), Query Frame = 0
BLAST of Clc06G06410 vs. NCBI nr
Match: KAG7013559.1 (SPAC24B11.05 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-122 Identity = 223/257 (86.77%), Postives = 236/257 (91.83%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy Swiss-Prot
Match: Q09893 (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16 Identity = 68/228 (29.82%), Postives = 108/228 (47.37%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy TrEMBL
Match: A0A0A0KEU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G423990 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 7.1e-131 Identity = 233/257 (90.66%), Postives = 244/257 (94.94%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy TrEMBL
Match: A0A1S3BLM9 (uncharacterized protein LOC103491402 OS=Cucumis melo OX=3656 GN=LOC103491402 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 4.8e-127 Identity = 231/260 (88.85%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy TrEMBL
Match: A0A6J1H4J5 (uncharacterized protein LOC111460088 OS=Cucurbita moschata OX=3662 GN=LOC111460088 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123 Identity = 223/257 (86.77%), Postives = 237/257 (92.22%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy TrEMBL
Match: A0A6J1L438 (uncharacterized protein LOC111498970 OS=Cucurbita maxima OX=3661 GN=LOC111498970 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 222/257 (86.38%), Postives = 235/257 (91.44%), Query Frame = 0
BLAST of Clc06G06410 vs. ExPASy TrEMBL
Match: A0A6J1EVA9 (uncharacterized protein LOC111436918 OS=Cucurbita moschata OX=3662 GN=LOC111436918 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122 Identity = 215/257 (83.66%), Postives = 234/257 (91.05%), Query Frame = 0
BLAST of Clc06G06410 vs. TAIR 10
Match: AT2G32150.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 321.6 bits (823), Expect = 5.6e-88 Identity = 158/260 (60.77%), Postives = 198/260 (76.15%), Query Frame = 0
BLAST of Clc06G06410 vs. TAIR 10
Match: AT5G02230.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71 Identity = 127/246 (51.63%), Postives = 167/246 (67.89%), Query Frame = 0
BLAST of Clc06G06410 vs. TAIR 10
Match: AT5G02230.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71 Identity = 127/246 (51.63%), Postives = 167/246 (67.89%), Query Frame = 0
BLAST of Clc06G06410 vs. TAIR 10
Match: AT3G62040.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 258.1 bits (658), Expect = 7.7e-69 Identity = 116/241 (48.13%), Postives = 176/241 (73.03%), Query Frame = 0
BLAST of Clc06G06410 vs. TAIR 10
Match: AT5G59490.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 241.9 bits (616), Expect = 5.7e-64 Identity = 111/238 (46.64%), Postives = 163/238 (68.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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