Clc06G05170 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G05170
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	glycine-rich protein
Location	ClcChr06: 5340195 .. 5341219 (+)
RNA-Seq Expression	Clc06G05170
Synteny	Clc06G05170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCGCGTTACGAACACGCGGCGTTTTCGGATTCCAGTGTCGTGGAGTAACTCGTCCGCCATCTCGTTTTCCTCGTTGATTTTTCTTCAACTTCCCCAAATTTCTTAAAGCCCTAGATTTCTCTTCTACGAAATCCCAATTCTTTTTCCAATTCGACATCCTTCCATTGCAATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGATTGGTACAAATTCTCTTCTCAACAAACATCCTTTAGAATGGAAATCTGGTTATAAAAATCTCTTGTATTCAATTGAAAATTGGTATGTATATATTTTGTAAATAATTCACATTGTTTTATCTTAGTAAATTACATATTGAAATCTGTGCAATCTGATGATCTCATTCCTTGCTTCCCGTGGCTGGTGTTTATCATTCTTATAATGGATAAATATGTGTCTCTTTCTTTCTCAACCTGTGAGAGAAATCTGTGGGCGG

mRNA sequence

CCTCGCGTTACGAACACGCGGCGTTTTCGGATTCCAGTGTCGTGGAGTAACTCGTCCGCCATCTCGTTTTCCTCGTTGATTTTTCTTCAACTTCCCCAAATTTCTTAAAGCCCTAGATTTCTCTTCTACGAAATCCCAATTCTTTTTCCAATTCGACATCCTTCCATTGCAATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGATTGGTACAAATTCTCTTCTCAACAAACATCCTTTAGAATGGAAATCTGGTTATAAAAATCTCTTGTATTCAATTGAAAATTGGTATGTATATATTTTGTAAATAATTCACATTGTTTTATCTTAGTAAATTACATATTGAAATCTGTGCAATCTGATGATCTCATTCCTTGCTTCCCGTGGCTGGTGTTTATCATTCTTATAATGGATAAATATGTGTCTCTTTCTTTCTCAACCTGTGAGAGAAATCTGTGGGCGG

Coding sequence (CDS)

ATGGATTCCTCTCTGGTTGCTGGAACGCTTTCAATGGTTGCCAACAACGGCATCGGCTTCGCTAAATTCCTCAACCGCCTCGATTTCGTTTCCAATTACTGTATCTCAGCCACCGATTCAATCACTGACCAGATCCCACCATCTTCCGCCCCTGGAGCTCTTCAATTATCTGCCGCACTTTTCCCCGTCGCAACCATTGCTCCACCGCCTGTCAAATCCGTTTCGTACCGATCGGCCTCGCGGACGTTTCTCCGTAGAAAGCGACGCACGAAGCGTAGATTGTACAGCGATGATTCCGAAGGCCGCGAAAACGATGGATTCGGTGGCGGCGATTTTGACGGACCGTATGGCGGCGGCGGCGGCGGCGGCGGTAGAGGTTGGAATTTCGATAGATTTGGGGGAAATGATTGGGATGAATCATCCTCTTCTTCTTCCTCTTCCAATCCTGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTGTCAAATTGTGTTCATTTTGCGTTCAAGAAGGTTGTTAGATTTGCAGCTGAAGCAATTGGGAATTCCGAAAGGGGAAAATTATCCATGAGATTTATCTCCGTTTGTTGA

Protein sequence

MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGGGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC

Homology

[Close]

BLAST of Clc06G05170 vs. NCBI nr
Match: XP_038874866.1 (uncharacterized protein LOC120067363 [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.2e-93
Identity = 185/199 (92.96%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDS+TDQI PSSA GALQLSAAL
Sbjct: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSVTDQISPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGG-G 120
           FP+ATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS DSEGRE+DGF GGDFDGPYGG G
Sbjct: 61  FPIATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSGDSEGREDDGFAGGDFDGPYGGDG 120

Query: 121 GGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA 180
             GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 
Sbjct: 121 SSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAT 180

Query: 181 EAIGNSERGKLSMRFISVC 199
           EA+GNSERGK+SMR ISVC
Sbjct: 181 EAMGNSERGKMSMRLISVC 199

[Close]

BLAST of Clc06G05170 vs. NCBI nr
Match: XP_011657286.1 (uncharacterized protein LOC105435841 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]

BLAST of Clc06G05170 vs. NCBI nr
Match: XP_022138602.1 (uncharacterized protein LOC111009719 [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 6.1e-92
Identity = 181/198 (91.41%), Postives = 189/198 (95.45%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSA GALQLSAAL
Sbjct: 1   MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGGG 120
           FPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSEG E+DGFGG +FDG YGGGG
Sbjct: 61  FPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEDDGFGGDNFDGSYGGGG 120

Query: 121 GGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAE 180
           GG GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+
Sbjct: 121 GGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAD 180

Query: 181 AIGNSERGKLSMRFISVC 199
           AIGNSERGKLSMR ISVC
Sbjct: 181 AIGNSERGKLSMRLISVC 198

[Close]

BLAST of Clc06G05170 vs. NCBI nr
Match: XP_008458406.1 (PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS   +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYG  G
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEA GNSERGKLSMR ISVC
Sbjct: 181 AEAFGNSERGKLSMRLISVC 200

[Close]

BLAST of Clc06G05170 vs. NCBI nr
Match: XP_023548774.1 (uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86
Identity = 177/200 (88.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSA GALQLSAAL
Sbjct: 1   MDTSLVAGTLSMVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDSEGRENDGFGGGDFDGPYGG- 120
           FPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDSEG E++GF GGDFDGPYGG 
Sbjct: 61  FPVATIAPPPVKSISCRSSSRTFLRRKRRTKRRLYSSDDSEGGEDNGFDGGDFDGPYGGD 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGG+DWDESSSSS+S NPAYYFVYEV+CWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGSDWDESSSSSTSLNPAYYFVYEVICWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSER KL  R ISVC
Sbjct: 181 AEAIGNSERVKLFTRLISVC 200

[Close]

BLAST of Clc06G05170 vs. ExPASy TrEMBL
Match: A0A0A0KG90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.9e-93
Identity = 186/200 (93.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCIS TDSITDQIPPSS   AL+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISVTDSITDQIPPSSTAAALRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGP G  G
Sbjct: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPIGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GG GGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGSGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSERGKL+MR ISVC
Sbjct: 181 AEAIGNSERGKLAMRLISVC 200

[Close]

BLAST of Clc06G05170 vs. ExPASy TrEMBL
Match: A0A6J1CBL0 (uncharacterized protein LOC111009719 OS=Momordica charantia OX=3673 GN=LOC111009719 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.9e-92
Identity = 181/198 (91.41%), Postives = 189/198 (95.45%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSM ANNG+GFAKFLNRLDFVSNYC+SA+DSIT+QIPPSSA GALQLSAAL
Sbjct: 1   MDSSLVAGTLSMAANNGLGFAKFLNRLDFVSNYCVSASDSITEQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYGGGG 120
           FPVATIAPPPVKS+S RSASRTFLRRKRRTKRRLYSDDSEG E+DGFGG +FDG YGGGG
Sbjct: 61  FPVATIAPPPVKSISRRSASRTFLRRKRRTKRRLYSDDSEGGEDDGFGGDNFDGSYGGGG 120

Query: 121 GGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAE 180
           GG GRGWNFDRFGGNDWDESSSSSS SNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAA+
Sbjct: 121 GGSGRGWNFDRFGGNDWDESSSSSSPSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFAAD 180

Query: 181 AIGNSERGKLSMRFISVC 199
           AIGNSERGKLSMR ISVC
Sbjct: 181 AIGNSERGKLSMRLISVC 198

[Close]

BLAST of Clc06G05170 vs. ExPASy TrEMBL
Match: A0A1S3C7S8 (uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.6e-92
Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MDSSLVAGTLSMVANN IGFAK LNRLDFVSNYCISATDSITDQIP SS   +L+LSAAL
Sbjct: 1   MDSSLVAGTLSMVANNSIGFAKLLNRLDFVSNYCISATDSITDQIPSSSTAASLRLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDGFGGGDFDGPYG--G 120
           FPVATIAPPPVKSVS RSASRTFLRRKRRTKRRLYSDDSEGRE+DGFGGGDFDGPYG  G
Sbjct: 61  FPVATIAPPPVKSVSNRSASRTFLRRKRRTKRRLYSDDSEGREDDGFGGGDFDGPYGGDG 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGGNDWDESS SSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGNDWDESSFSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEA GNSERGKLSMR ISVC
Sbjct: 181 AEAFGNSERGKLSMRLISVC 200

[Close]

BLAST of Clc06G05170 vs. ExPASy TrEMBL
Match: A0A6J1KZI4 (uncharacterized protein LOC111499005 OS=Cucurbita maxima OX=3661 GN=LOC111499005 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.4e-86
Identity = 177/200 (88.50%), Postives = 186/200 (93.00%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MD+SLVAGTLS+VANNG+GFAKFLNRLD +SNY ISATDSITDQIPPSSA GALQLS AL
Sbjct: 1   MDTSLVAGTLSIVANNGVGFAKFLNRLDILSNYSISATDSITDQIPPSSAAGALQLSVAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLY-SDDSEGRENDGFGGGDFDGPYGG- 120
           FPVATIAPPPVKS+S RS+SRTFLRRKRRTKRRLY SDDSEG E++GF  GDFDGPYGG 
Sbjct: 61  FPVATIAPPPVKSISCRSSSRTFLRRKRRTKRRLYSSDDSEGGEDNGFDCGDFDGPYGGD 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRFGGNDWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFGGNDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSER KL MR ISVC
Sbjct: 181 AEAIGNSERVKLFMRLISVC 200

[Close]

BLAST of Clc06G05170 vs. ExPASy TrEMBL
Match: A0A6J1H560 (uncharacterized protein LOC111460236 OS=Cucurbita moschata OX=3662 GN=LOC111460236 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.9e-85
Identity = 175/200 (87.50%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MDSSLVAGTLSMVANNGIGFAKFLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSAAL 60
           MD+SLVAGTLSMVANNG+GFAKFLNRLD +SNY  SATDSITDQIPPSSA GALQLSAAL
Sbjct: 1   MDTSLVAGTLSMVANNGVGFAKFLNRLDILSNYSFSATDSITDQIPPSSAAGALQLSAAL 60

Query: 61  FPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYS-DDSEGRENDGFGGGDFDGPYGG- 120
           FPVATIAPPPVKS+S RS+SR FLRRKRRTKRRLYS DDSEG E++GF GGDFDGPYGG 
Sbjct: 61  FPVATIAPPPVKSISCRSSSRMFLRRKRRTKRRLYSGDDSEGGEDNGFDGGDFDGPYGGD 120

Query: 121 GGGGGGRGWNFDRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180
           GGGGGGRGWNFDRF G+DWDESSSSS+S NPAYYFVYEVVCWIALSNCVHFAFKKVVRFA
Sbjct: 121 GGGGGGRGWNFDRFEGSDWDESSSSSTSLNPAYYFVYEVVCWIALSNCVHFAFKKVVRFA 180

Query: 181 AEAIGNSERGKLSMRFISVC 199
           AEAIGNSER KL +R ISVC
Sbjct: 181 AEAIGNSERVKLFLRLISVC 200

[Close]

BLAST of Clc06G05170 vs. TAIR 10
Match: AT3G06780.1 (glycine-rich protein )

HSP 1 Score: 131.3 bits (329), Expect = 8.3e-31
Identity = 99/214 (46.26%), Postives = 131/214 (61.21%), Query Frame = 0


Query: 1   MDSSLVAGTLSM-VANNGIGFAK-FLNRLDFVSNYCISATDSITDQIPPSSAPGALQLSA 60
           M+ SL+A T+++  A  GI F K  L RLD  ++  IS  DS+ D   P    G +Q SA
Sbjct: 1   MEFSLIADTVTVCTAKQGIAFGKSLLQRLDLANH--ISFADSVVDHQSPGG--GIVQASA 60

Query: 61  ALFPVATIAPPPVKSVSYRSASRTFLRRKRRTKRRLYSDDSEGRENDG-------FGGGD 120
            +FPV  IAPPPV+S SY++  R  +R+KRRT+R  +  D +   + G       FGG  
Sbjct: 61  IIFPVDAIAPPPVRSSSYKTIRR--IRKKRRTRRVSFGGDGDDAGDFGRFLLEGDFGGS- 120

Query: 121 FDGPYGGGGG---GGGRGWNF----DRFGGNDWDESSSSSSSSNPAYYFVYEVVCWIALS 180
            DGP+G GGG   GGG+GWN+      FG ++WD  SS SS S+PA  FVYEV+CWIALS
Sbjct: 121 -DGPFGFGGGGNDGGGKGWNYGGGGGGFGRDNWD-GSSFSSWSDPAMEFVYEVICWIALS 180

Query: 181 NCVHFAFKKVVRFAAEAIGNSERGKLSMRFISVC 199
           NCVHFAFK++VR     + + ER KL++    VC
Sbjct: 181 NCVHFAFKRIVRI----VTDGEREKLNIALSPVC 201

The following BLAST results are available for this feature:

BLAST of Clc06G05170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874866.1	4.2e-93	92.96	uncharacterized protein LOC120067363 [Benincasa hispida]	[more]
XP_011657286.1	1.2e-92	93.00	uncharacterized protein LOC105435841 [Cucumis sativus]	[more]
XP_022138602.1	6.1e-92	91.41	uncharacterized protein LOC111009719 [Momordica charantia]	[more]
XP_008458406.1	1.4e-91	92.50	PREDICTED: uncharacterized protein LOC103497828 [Cucumis melo]	[more]
XP_023548774.1	2.9e-86	88.50	uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc06G05170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc06G05170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG90	5.9e-93	93.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318150 PE=4 SV=1	[more]
A0A6J1CBL0	2.9e-92	91.41	uncharacterized protein LOC111009719 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A1S3C7S8	6.6e-92	92.50	uncharacterized protein LOC103497828 OS=Cucumis melo OX=3656 GN=LOC103497828 PE=...	[more]
A0A6J1KZI4	5.4e-86	88.50	uncharacterized protein LOC111499005 OS=Cucurbita maxima OX=3661 GN=LOC111499005...	[more]
A0A6J1H560	5.9e-85	87.50	uncharacterized protein LOC111460236 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]

BLAST of Clc06G05170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06780.1	8.3e-31	46.26	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..115
None	No IPR available	PANTHER	PTHR36751	F3E22.8 PROTEIN	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G05170.1	Clc06G05170.1	mRNA