Clc06G02890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G02890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Dof zinc finger protein like
Location	ClcChr06: 2881130 .. 2882302 (+)
RNA-Seq Expression	Clc06G02890
Synteny	Clc06G02890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCTAGAGCTAGGCACACTTTCACCCTTTTTCTTTCTCTTTCCCACCATTTTTAAAGCAAAGCTGAAACCCAAATTGAAACCAACCCAAGAACATTCTTTGTCTTTCTTGTTTAAATAGAATGAAAAAGAAGGGAAAAATAAAATTCTCTCTCTCAACTCATCTTTTGAGCTTCTTTCTTTCACTCTTCATGGAGATTGCTGATCACTGAGCATATAGGTGAGATGAATCAATAGTCTTTATCTTTTCCATTTCTCTTTTTGTTTATTTTTTTAAGTTTATTATTGATATATATATGGTAGGATTGTTTTGGATGTAGGGTTTGTGTGAGACACAAAATATGGAAGACATAAACCCTAATTCAAGCACAAGATCATCACCATCATCATCATCCATATTGGAGATCAAGAAATCAACAAAGCCTCCTAAAGATCAATTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTACAGCCTTACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGATATTGGACTGAAGGTGGGTCCCTCAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAACAGATCAAAATCAACAACAACAATAACAATAATGTCTAATTCTTCAGCTCCTTCTTCTTCATCTTCATCTTCATCTGATCATTTCAACAACAACAACCCAAAATTACCAAATTACCCTGCATCTCAATTTTCTTCACAGAACCCAGTTGGAAAGGATCTTAACCTTGCTTTCCCTTGTGCCATGTCTCATTATGCTGATCATCAGCTCTCTAAGGTTGAAAATGTCAACAATAGTAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCCAAATCTAATGCCAAATTCCAATAACAATAATACTAATTTGGGGATTAATAGTCATGGCCAATACCCAACTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGAAGAAATTTGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATGAGAGGCAACAAGGGAATAACATTTCAACTGGATATTGGAGTGGGATGCTTGAGGATGAATCATTTTAAGGAAGTCAGTTTT

mRNA sequence

CAAGCTAGAGCTAGGCACACTTTCACCCTTTTTCTTTCTCTTTCCCACCATTTTTAAAGCAAAGCTGAAACCCAAATTGAAACCAACCCAAGAACATTCTTTGTCTTTCTTGTTTAAATAGAATGAAAAAGAAGGGAAAAATAAAATTCTCTCTCTCAACTCATCTTTTGAGCTTCTTTCTTTCACTCTTCATGGAGATTGCTGATCACTGAGCATATAGGATTGTTTTGGATGTAGGGTTTGTGTGAGACACAAAATATGGAAGACATAAACCCTAATTCAAGCACAAGATCATCACCATCATCATCATCCATATTGGAGATCAAGAAATCAACAAAGCCTCCTAAAGATCAATTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTACAGCCTTACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGATATTGGACTGAAGGTGGGTCCCTCAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAACAGATCAAAATCAACAACAACAATAACAATAATGTCTAATTCTTCAGCTCCTTCTTCTTCATCTTCATCTTCATCTGATCATTTCAACAACAACAACCCAAAATTACCAAATTACCCTGCATCTCAATTTTCTTCACAGAACCCAGTTGGAAAGGATCTTAACCTTGCTTTCCCTTGTGCCATGTCTCATTATGCTGATCATCAGCTCTCTAAGGTTGAAAATGTCAACAATAGTAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCCAAATCTAATGCCAAATTCCAATAACAATAATACTAATTTGGGGATTAATAGTCATGGCCAATACCCAACTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGAAGAAATTTGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATGAGAGGCAACAAGGGAATAACATTTCAACTGGATATTGGAGTGGGATGCTTGAGGATGAATCATTTTAAGGAAGTCAGTTTT

Coding sequence (CDS)

ATGGAAGACATAAACCCTAATTCAAGCACAAGATCATCACCATCATCATCATCCATATTGGAGATCAAGAAATCAACAAAGCCTCCTAAAGATCAATTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTACAGCCTTACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGATATTGGACTGAAGGTGGGTCCCTCAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAACAGATCAAAATCAACAACAACAATAACAATAATGTCTAATTCTTCAGCTCCTTCTTCTTCATCTTCATCTTCATCTGATCATTTCAACAACAACAACCCAAAATTACCAAATTACCCTGCATCTCAATTTTCTTCACAGAACCCAGTTGGAAAGGATCTTAACCTTGCTTTCCCTTGTGCCATGTCTCATTATGCTGATCATCAGCTCTCTAAGGTTGAAAATGTCAACAATAGTAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCCAAATCTAATGCCAAATTCCAATAACAATAATACTAATTTGGGGATTAATAGTCATGGCCAATACCCAACTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGAAGAAATTTGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATGAGAGGCAACAAGGGAATAACATTTCAACTGGATATTGGAGTGGGATGCTTGAGGATGAATCATTTTAA

Protein sequence

MEDINPNSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLMPNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYWSGMLEDESF

Homology

[Close]

BLAST of Clc06G02890 vs. NCBI nr
Match: XP_038875469.1 (dof zinc finger protein DOF1.8-like [Benincasa hispida])

HSP 1 Score: 401.0 bits (1029), Expect = 8.3e-108
Identity = 220/272 (80.88%), Postives = 234/272 (86.03%), Query Frame = 0


Query: 1   MEDINPNSSTRSSPSSSSILEI-KKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYF 60
           ME+INPN           ILE+ KKSTKPPK+ LNCPRCKSNNTKFCYYNNYSLTQPRYF
Sbjct: 1   MEEINPN---------PCILEMKKKSTKPPKEPLNCPRCKSNNTKFCYYNNYSLTQPRYF 60

Query: 61  CKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF-NNNNP 120
           CKSCRRYWTEGGSLRNVPIGGGSRKNRSKS+TTI+I   SSAP SSSSSSSDHF NNNNP
Sbjct: 61  CKSCRRYWTEGGSLRNVPIGGGSRKNRSKSSTTISI---SSAP-SSSSSSSDHFNNNNNP 120

Query: 121 KLPNYPASQFSSQNPVG-KDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIG-FRGLSS 180
           KLPNYP+SQFS+QNP+G +D NLAFP            KVENVNNS YNCGIG FRGLS+
Sbjct: 121 KLPNYPSSQFSTQNPIGLRDFNLAFP------------KVENVNNS-YNCGIGNFRGLST 180

Query: 181 FIPNLMPNSNNNNTNLGINSHG-QYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQE 240
           FIPNLMPNSNNNN NLGINS+  QYPTGFSLPD+DEFKPSLGI+SVDGFGDGRNLLPFQE
Sbjct: 181 FIPNLMPNSNNNNANLGINSNSDQYPTGFSLPDIDEFKPSLGIHSVDGFGDGRNLLPFQE 240

Query: 241 LNQQSAAPNEGDHQNERQQGNNISTGYWSGML 268
           LNQQ+AAPNEGDHQNERQQG NISTGYWSGML
Sbjct: 241 LNQQTAAPNEGDHQNERQQGINISTGYWSGML 246

[Close]

BLAST of Clc06G02890 vs. NCBI nr
Match: KAG6592928.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-74
Identity = 170/267 (63.67%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  T S+PSS S   +  S + PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY
Sbjct: 2   NQKTNSNPSSRSSSSLSSSREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 61

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF----NNNNPKLPN 126
           WTEGGSLRNVP+GGGSRK+R KSTTT T MS      SSSSSSSDHF    NNNN +LPN
Sbjct: 62  WTEGGSLRNVPVGGGSRKSR-KSTTTTTTMS-----CSSSSSSSDHFKNKNNNNNARLPN 121

Query: 127 YPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLM 186
           YP+SQ         DLN+AFPCAM+H+ +     VEN+NN       G+RGLSSFIPNLM
Sbjct: 122 YPSSQ---------DLNVAFPCAMTHFVEVP-KVVENMNND------GYRGLSSFIPNLM 181

Query: 187 PNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQQSAA 246
           PNSNN + +LG +         SLP + EFKPSLGIN VDGFG G NL+ FQ+LNQ S  
Sbjct: 182 PNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGSGPNLVGFQQLNQSSCG 236

Query: 247 -PNE-GDHQNERQQGNNISTGYWSGML 268
            PNE  DHQ ERQQGNNIS+G+WSGML
Sbjct: 242 EPNECDDHQKERQQGNNISSGFWSGML 236

[Close]

BLAST of Clc06G02890 vs. NCBI nr
Match: XP_022960172.1 (dof zinc finger protein DOF3.7-like [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-72
Identity = 168/271 (61.99%), Postives = 194/271 (71.59%), Query Frame = 0


Query: 2   EDINPNSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCK 61
           + INPN S+RSS  SS       S + PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCK
Sbjct: 3   QKINPNPSSRSSSLSS-------SREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCK 62

Query: 62  SCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF---NNNNP 121
           SCRRYWTEGGSLRNVP+GGGSRK+R  +TTT       +   SSSSSSSDHF   NNNN 
Sbjct: 63  SCRRYWTEGGSLRNVPVGGGSRKSRKSATTT-------TVSCSSSSSSSDHFKNNNNNNA 122

Query: 122 KLPNYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFI 181
           +LPNYP+SQ         DLN+AFPCAM+H+ +     VEN+NN       G+RGLSSFI
Sbjct: 123 RLPNYPSSQ---------DLNVAFPCAMTHFVEVP-KVVENMNN-------GYRGLSSFI 182

Query: 182 PNLMPNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQ 241
           PNLMPNSNN + +LG +         SLP + EFKPSLGIN VDGFG+G NL+ FQ+LNQ
Sbjct: 183 PNLMPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGNGPNLVGFQQLNQ 232

Query: 242 QSAA-PNE-GDHQNERQQGNNISTGYWSGML 268
            S   PNE  DHQ ERQQGNNIS+G+WSGML
Sbjct: 243 SSCGEPNECDDHQKERQQGNNISSGFWSGML 232

[Close]

BLAST of Clc06G02890 vs. NCBI nr
Match: XP_004140519.1 (dof zinc finger protein DOF3.7 [Cucumis sativus] >XP_011656836.1 dof zinc finger protein DOF3.7 [Cucumis sativus] >KGN46493.1 hypothetical protein Csa_005274 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-72
Identity = 174/254 (68.50%), Postives = 194/254 (76.38%), Query Frame = 0


Query: 13  SPSSSSILEIK----KSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWT 72
           +P+    LE+K     +TK PK+QL+CPRCKSNNTKFCYYNNYSL QPRYFCKSCRRYWT
Sbjct: 5   NPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWT 64

Query: 73  EGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF---NNNNPKLPNYP- 132
           EGGSLRNVPIGG SRKNRSKS++T TI       ++S+SSSSD+F   NN N KLPNYP 
Sbjct: 65  EGGSLRNVPIGGASRKNRSKSSSTTTI------TTTSTSSSSDYFCSNNNKNQKLPNYPS 124

Query: 133 ASQFSSQNPVG-KDLNLAFPCAMSHYADH-QLSKVENVNNSNYNCGIGFRGLSSFIPNLM 192
           +SQ S+Q PVG +DLNL         ADH  L KVENVN +N+    GFRGLSSFIPNLM
Sbjct: 125 SSQISTQIPVGLRDLNL---------ADHDHLPKVENVNYNNF--AFGFRGLSSFIPNLM 184

Query: 193 PNSN--NNNTNLGINSHGQYP-TGFSLPD-LDEFKPSLGINSVDGFGDGRNL--LPFQEL 251
           PNSN  NNN NLGINS+ QYP +GFSL D +DEFKPS GINSV    DGRNL  LPFQEL
Sbjct: 185 PNSNHINNNGNLGINSNSQYPSSGFSLGDHVDEFKPSFGINSV----DGRNLLQLPFQEL 237

[Close]

BLAST of Clc06G02890 vs. NCBI nr
Match: XP_023514890.1 (dof zinc finger protein DOF3.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-72
Identity = 170/273 (62.27%), Postives = 193/273 (70.70%), Query Frame = 0


Query: 2   EDINPNSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCK 61
           + INPN S+RSS      L +  S + PK+  +CPRCKSNNTKFCYYNNYSL QPRYFCK
Sbjct: 3   QKINPNPSSRSSS-----LSLSSSREAPKELRSCPRCKSNNTKFCYYNNYSLMQPRYFCK 62

Query: 62  SCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLP 121
           SCRRYWTEGGSLRNVP+GGGSRK+R KSTTT T+        SSSSSSSDHF  N P+LP
Sbjct: 63  SCRRYWTEGGSLRNVPVGGGSRKSR-KSTTTTTM------SCSSSSSSSDHF-KNKPRLP 122

Query: 122 NYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNL 181
           NYP+SQ         DLN+AFPCAM+H+ +     VEN+ N       GFRGLSSFIPNL
Sbjct: 123 NYPSSQ---------DLNVAFPCAMTHFVEVP-KVVENMKND------GFRGLSSFIPNL 182

Query: 182 MPNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQQSA 241
           MPNSNN + +LG +         SLP L EFKPSLGIN VDGFG G NL+ FQ+LNQ S 
Sbjct: 183 MPNSNNIDADLGYH---------SLP-LHEFKPSLGINCVDGFGSGPNLVGFQQLNQNSC 236

Query: 242 A-PNE-GDHQNERQQGNNISTGYWSGMLEDESF 273
             PNE  DHQ ERQQGNNIS+G+WSGML   SF
Sbjct: 243 GEPNECDDHQKERQQGNNISSGFWSGMLGGGSF 236

[Close]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 8.3e-34
Identity = 110/285 (38.60%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  +  + ++++ +E +K+   P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRY
Sbjct: 50  NGGSGGNTNNTATMETRKAR--PQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRY 109

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PA 126
           WTEGGSLRNVP+GG SRKN+            SS P +S S         NPKLP+  P 
Sbjct: 110 WTEGGSLRNVPVGGSSRKNK-----------RSSTPLASPS---------NPKLPDLNPP 169

Query: 127 SQFSSQ--NPVGKDLN-LAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLM 186
             FSSQ  N   KDLN L+FP    H+  H L  +     SN   G+  RG+++F+P  M
Sbjct: 170 ILFSSQIPNKSNKDLNLLSFPVMQDHH-HHALELL----RSN---GVSSRGMNTFLPGQM 229

Query: 187 PNSN------------------NNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGF 246
            +SN                  NNN +  I+ H     G     ++  + +   N+ D  
Sbjct: 230 MDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHH----QGIGHNTINSNQRAQD-NNDDMN 289

Query: 247 GDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYWSGMLED 270
           G  R L PF ++ + S+   E  H      GNN    YW+GM  +
Sbjct: 290 GASRVLFPFSDMKELSSTTQEKSH------GNNT---YWNGMFSN 290

[Close]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 110/302 (36.42%), Postives = 155/302 (51.32%), Query Frame = 0


Query: 23  KKSTKPPKDQ-LNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGG 82
           ++  +P KDQ +NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+P+GGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 83  SRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNYPASQFSSQNP-----VGK 142
           SRKN+   +++  I +N S   S+  ++  H ++++  L +      + QNP       +
Sbjct: 102 SRKNKRSHSSSSDISNNHS--DSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQ 161

Query: 143 DLNLAF-PCAM--SHYAD--HQLSKVENVNNSNYN------CGIGFRGLSSFIPNLMPNS 202
           DLNL F P  M  +++ D  H +    N +N+N N      C          I N   N 
Sbjct: 162 DLNLGFSPHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNG 221

Query: 203 NNNNTN-LGINSHGQYPTGFSLPDLDEFKP----------SLGINSVDGF---------- 262
           N++N++ +G   H Q P        D +KP          SL  +  +GF          
Sbjct: 222 NSSNSSFMGFPVHNQDPASGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEG 281

Query: 263 ---GD---GRNLLPFQELN---QQSAAPNEGDHQNERQQGNN-----ISTGYWSGMLEDE 273
              GD   GR+L PF++L      S+A    D    +++G+       S GYW+GML   
Sbjct: 282 GEGGDDVNGRHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGG 341

[Close]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-33
Identity = 122/333 (36.64%), Postives = 164/333 (49.25%), Query Frame = 0


Query: 1   MEDINPNSSTR-SSPSSSSILEIKKSTKPPKDQ-LNCPRCKSNNTKFCYYNNYSLTQPRY 60
           M +I  N+  +  S   S    +++  +P KDQ LNCPRC S NTKFCYYNNYSLTQPRY
Sbjct: 15  MNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRY 74

Query: 61  FCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNP 120
           FCK CRRYWT GGSLRN+P+GGG RKN+  S+      S+SS+PSSSSSS    F NNN 
Sbjct: 75  FCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSN-----SSSSSPSSSSSSKKPLFANNNT 134

Query: 121 KLPNYP-------------------ASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVEN 180
             P  P                   +  F + + V KDLNLAF        +H  S  E 
Sbjct: 135 PTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEV-KDLNLAFSQGFGIGHNHHSSIPEF 194

Query: 181 V----NNSNYNCGIGFRGLSSFIPNLMPNSNNNNTNLGINSHGQYPT------------G 240
           +    ++S  N  +     S  +  +  +S ++N+     S   YP             G
Sbjct: 195 LQVVPSSSMKNNPLVSTSSSLELLGISSSSASSNSRPAFMS---YPNVHDSSVYTASGFG 254

Query: 241 FSLPDLDEF-KPSLGIN-----------SVDGFGDGRNLLPFQELNQ---QSAAPNEG-- 268
            S P   EF +P+LG +              G  +GR LLPF+ L +    S++ N G  
Sbjct: 255 LSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPLLPFESLLKLPVSSSSTNSGGN 314

[Close]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 111/327 (33.94%), Postives = 151/327 (46.18%), Query Frame = 0


Query: 8   SSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYW 67
           S   ++ ++++++  +K+   P+++LNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYW
Sbjct: 57  SGVSNNNNNTAVVAERKAR--PQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYW 116

Query: 68  TEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PAS 127
           TEGGSLRNVP+GG SRKN+                 SSSSSSS+        LP+  P  
Sbjct: 117 TEGGSLRNVPVGGSSRKNK----------------RSSSSSSSNILQTIPSSLPDLNPPI 176

Query: 128 QFSSQ-----NPVGKDLN-LAFPCAMSHYADH-------QLSKVENVNNSNY-------- 187
            FS+Q         +DLN L+FP     +  H       Q+ K+E   N  +        
Sbjct: 177 LFSNQIHNKSKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSS 236

Query: 188 ----------------NCGIGFRGLSSFIPNLMPNSNNNNTNLGINSHGQYPTGFSLPDL 247
                             G+     S    + MP+ +  ++N  + +   +PT      +
Sbjct: 237 SVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPT------M 296

Query: 248 DEFKPS----------LGINS--------VDGFGDGRNLLPF--QELNQQSAAPNEGDHQ 267
            ++KPS          LG NS         D    GR L PF  Q     S+   E DH 
Sbjct: 297 VDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQGRVLFPFGDQMKELSSSITQEVDHD 356

[Close]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 8.3e-26
Identity = 83/204 (40.69%), Postives = 115/204 (56.37%), Query Frame = 0


Query: 8   SSTRSSPSSSSILEIKKSTKPPKDQL-----NCPRCKSNNTKFCYYNNYSLTQPRYFCKS 67
           SST+ S +++  +E +   K  + +L     NCPRC+S NTKFCYYNNYSL+QPRYFCKS
Sbjct: 18  SSTKGSNNNNKKMEEEMKKKVSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKS 77

Query: 68  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNN---NPK 127
           CRRYWT+GG+LRNVP+GGG R+N+          S+SSA S ++++ S +F+ +   NP 
Sbjct: 78  CRRYWTKGGTLRNVPVGGGCRRNK---------RSSSSAFSKNNNNKSINFHTDPLQNPL 137

Query: 128 LPNYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLS--------KVENVNNSNYNCGI-- 187
           +   P S F   + +  DLNLAF     H+   Q +         +    NS  + GI  
Sbjct: 138 ITGMPPSSFGYDHSI--DLNLAFATLQKHHLSSQATTPSFGFGGDLSIYGNSTNDVGIFG 197

Query: 188 GFRGL--SSFIPNLMPNSNNNNTN 192
           G  G   +S     M  + NNN N
Sbjct: 198 GQNGTYNNSLCYGFMSGNGNNNQN 210

[Close]

BLAST of Clc06G02890 vs. ExPASy TrEMBL
Match: A0A6J1H6N0 (dof zinc finger protein DOF3.7-like OS=Cucurbita moschata OX=3662 GN=LOC111460991 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 7.2e-73
Identity = 168/271 (61.99%), Postives = 194/271 (71.59%), Query Frame = 0


Query: 2   EDINPNSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCK 61
           + INPN S+RSS  SS       S + PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCK
Sbjct: 3   QKINPNPSSRSSSLSS-------SREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCK 62

Query: 62  SCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF---NNNNP 121
           SCRRYWTEGGSLRNVP+GGGSRK+R  +TTT       +   SSSSSSSDHF   NNNN 
Sbjct: 63  SCRRYWTEGGSLRNVPVGGGSRKSRKSATTT-------TVSCSSSSSSSDHFKNNNNNNA 122

Query: 122 KLPNYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFI 181
           +LPNYP+SQ         DLN+AFPCAM+H+ +     VEN+NN       G+RGLSSFI
Sbjct: 123 RLPNYPSSQ---------DLNVAFPCAMTHFVEVP-KVVENMNN-------GYRGLSSFI 182

Query: 182 PNLMPNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQ 241
           PNLMPNSNN + +LG +         SLP + EFKPSLGIN VDGFG+G NL+ FQ+LNQ
Sbjct: 183 PNLMPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGNGPNLVGFQQLNQ 232

Query: 242 QSAA-PNE-GDHQNERQQGNNISTGYWSGML 268
            S   PNE  DHQ ERQQGNNIS+G+WSGML
Sbjct: 243 SSCGEPNECDDHQKERQQGNNISSGFWSGML 232

[Close]

BLAST of Clc06G02890 vs. ExPASy TrEMBL
Match: A0A0A0KAL6 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G103520 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 9.4e-73
Identity = 174/254 (68.50%), Postives = 194/254 (76.38%), Query Frame = 0


Query: 13  SPSSSSILEIK----KSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWT 72
           +P+    LE+K     +TK PK+QL+CPRCKSNNTKFCYYNNYSL QPRYFCKSCRRYWT
Sbjct: 5   NPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWT 64

Query: 73  EGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF---NNNNPKLPNYP- 132
           EGGSLRNVPIGG SRKNRSKS++T TI       ++S+SSSSD+F   NN N KLPNYP 
Sbjct: 65  EGGSLRNVPIGGASRKNRSKSSSTTTI------TTTSTSSSSDYFCSNNNKNQKLPNYPS 124

Query: 133 ASQFSSQNPVG-KDLNLAFPCAMSHYADH-QLSKVENVNNSNYNCGIGFRGLSSFIPNLM 192
           +SQ S+Q PVG +DLNL         ADH  L KVENVN +N+    GFRGLSSFIPNLM
Sbjct: 125 SSQISTQIPVGLRDLNL---------ADHDHLPKVENVNYNNF--AFGFRGLSSFIPNLM 184

Query: 193 PNSN--NNNTNLGINSHGQYP-TGFSLPD-LDEFKPSLGINSVDGFGDGRNL--LPFQEL 251
           PNSN  NNN NLGINS+ QYP +GFSL D +DEFKPS GINSV    DGRNL  LPFQEL
Sbjct: 185 PNSNHINNNGNLGINSNSQYPSSGFSLGDHVDEFKPSFGINSV----DGRNLLQLPFQEL 237

[Close]

BLAST of Clc06G02890 vs. ExPASy TrEMBL
Match: A0A6J1KS65 (dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111498170 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 7.9e-72
Identity = 169/269 (62.83%), Postives = 190/269 (70.63%), Query Frame = 0


Query: 7   NSSTRSSPSS--SSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCR 66
           N    S PSS  SS L +  S + PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKSCR
Sbjct: 2   NQKINSKPSSRLSSSL-LSSSREAPKEPRSCPRCKSNNTKFCYYNNYSLTQPRYFCKSCR 61

Query: 67  RYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF----NNNNPKL 126
           RYWTEGGSLRNVP+GGGSRK+R  +TTT           SSSSSSSDHF    NN+N +L
Sbjct: 62  RYWTEGGSLRNVPVGGGSRKSRKSTTTT---------SCSSSSSSSDHFKNKNNNSNARL 121

Query: 127 PNYPASQFSSQNPVGKDLNLAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPN 186
           PNYP+SQ         DLN+AFPCAM+H+ +     VEN+NN       GFRGLSSFIPN
Sbjct: 122 PNYPSSQ---------DLNVAFPCAMTHFVEVP-KVVENMNN-------GFRGLSSFIPN 181

Query: 187 LMPNSNNNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQQS 246
           LMPNSNN + +LG +         SLP LDEFKPSLGIN VDGFG G NL+ FQELNQ S
Sbjct: 182 LMPNSNNIDADLGYH---------SLP-LDEFKPSLGINCVDGFGGGPNLVGFQELNQNS 233

Query: 247 AA-PNE-GDHQNERQQGNNISTGYWSGML 268
              PNE  DHQ ERQQGNNIS+G+WSGML
Sbjct: 242 CGEPNECDDHQKERQQGNNISSGFWSGML 233

[Close]

BLAST of Clc06G02890 vs. ExPASy TrEMBL
Match: A0A1S3CC55 (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103498802 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.3e-69
Identity = 181/285 (63.51%), Postives = 199/285 (69.82%), Query Frame = 0


Query: 1   MEDINPNSSTRSSPSSSSILEIK----KSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQP 60
           ME+ NPN   +        LE+K     +TK PK+QLNCPRCKSNNTKFCYYNNYSL QP
Sbjct: 1   MEEKNPNYPCK--------LEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQP 60

Query: 61  RYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF--- 120
           RYFCKSCRRYWTEGGSLRNVPIGG SRKNRSK+         SS+ ++S+SSSSD+F   
Sbjct: 61  RYFCKSCRRYWTEGGSLRNVPIGGASRKNRSKA---------SSSTTTSTSSSSDYFCSN 120

Query: 121 NNNNPKLPNYP-ASQFSSQNPVG-KDLNLAFPCAMSHYADH-QLSKVENVNNSNYNCGIG 180
           NN N KLPNYP +SQ S+Q PVG +DLNL         ADH  L KVENVNN N N   G
Sbjct: 121 NNKNKKLPNYPSSSQISTQIPVGLRDLNL---------ADHDHLPKVENVNNYN-NFAFG 180

Query: 181 FRGLSSFIPNLMPNSN--NNNTNLGINS--HGQY-PTGFSLPD-LDEFKPSLGINSVDGF 240
           FRGLSSFIPNLMP+SN  NNN NLGINS  + QY  +GFSL D +DEFKPS GINSV   
Sbjct: 181 FRGLSSFIPNLMPDSNNINNNGNLGINSSHYSQYSSSGFSLGDHVDEFKPSFGINSV--- 240

Query: 241 GDGRN-LLPFQELNQQSAAPNEG-DHQNERQQGNNISTGYWSGML 268
            D RN LLPFQELNQQSAAPNEG DHQN            WSGML
Sbjct: 241 -DRRNLLLPFQELNQQSAAPNEGDDHQN------------WSGML 242

[Close]

BLAST of Clc06G02890 vs. ExPASy TrEMBL
Match: E5GCN0 (F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.3e-69
Identity = 181/285 (63.51%), Postives = 199/285 (69.82%), Query Frame = 0


Query: 1   MEDINPNSSTRSSPSSSSILEIK----KSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQP 60
           ME+ NPN   +        LE+K     +TK PK+QLNCPRCKSNNTKFCYYNNYSL QP
Sbjct: 1   MEEKNPNYPCK--------LEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQP 60

Query: 61  RYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHF--- 120
           RYFCKSCRRYWTEGGSLRNVPIGG SRKNRSK+         SS+ ++S+SSSSD+F   
Sbjct: 61  RYFCKSCRRYWTEGGSLRNVPIGGASRKNRSKA---------SSSTTTSTSSSSDYFCSN 120

Query: 121 NNNNPKLPNYP-ASQFSSQNPVG-KDLNLAFPCAMSHYADH-QLSKVENVNNSNYNCGIG 180
           NN N KLPNYP +SQ S+Q PVG +DLNL         ADH  L KVENVNN N N   G
Sbjct: 121 NNKNKKLPNYPSSSQISTQIPVGLRDLNL---------ADHDHLPKVENVNNYN-NFAFG 180

Query: 181 FRGLSSFIPNLMPNSN--NNNTNLGINS--HGQY-PTGFSLPD-LDEFKPSLGINSVDGF 240
           FRGLSSFIPNLMP+SN  NNN NLGINS  + QY  +GFSL D +DEFKPS GINSV   
Sbjct: 181 FRGLSSFIPNLMPDSNNINNNGNLGINSSHYSQYSSSGFSLGDHVDEFKPSFGINSV--- 240

Query: 241 GDGRN-LLPFQELNQQSAAPNEG-DHQNERQQGNNISTGYWSGML 268
            D RN LLPFQELNQQSAAPNEG DHQN            WSGML
Sbjct: 241 -DRRNLLLPFQELNQQSAAPNEGDDHQN------------WSGML 242

[Close]

BLAST of Clc06G02890 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-35
Identity = 110/285 (38.60%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  +  + ++++ +E +K+   P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRY
Sbjct: 50  NGGSGGNTNNTATMETRKAR--PQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRY 109

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PA 126
           WTEGGSLRNVP+GG SRKN+            SS P +S S         NPKLP+  P 
Sbjct: 110 WTEGGSLRNVPVGGSSRKNK-----------RSSTPLASPS---------NPKLPDLNPP 169

Query: 127 SQFSSQ--NPVGKDLN-LAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLM 186
             FSSQ  N   KDLN L+FP    H+  H L  +     SN   G+  RG+++F+P  M
Sbjct: 170 ILFSSQIPNKSNKDLNLLSFPVMQDHH-HHALELL----RSN---GVSSRGMNTFLPGQM 229

Query: 187 PNSN------------------NNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGF 246
            +SN                  NNN +  I+ H     G     ++  + +   N+ D  
Sbjct: 230 MDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHH----QGIGHNTINSNQRAQD-NNDDMN 289

Query: 247 GDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYWSGMLED 270
           G  R L PF ++ + S+   E  H      GNN    YW+GM  +
Sbjct: 290 GASRVLFPFSDMKELSSTTQEKSH------GNNT---YWNGMFSN 290

[Close]

BLAST of Clc06G02890 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-35
Identity = 110/285 (38.60%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  +  + ++++ +E +K+   P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRY
Sbjct: 38  NGGSGGNTNNTATMETRKAR--PQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRY 97

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PA 126
           WTEGGSLRNVP+GG SRKN+            SS P +S S         NPKLP+  P 
Sbjct: 98  WTEGGSLRNVPVGGSSRKNK-----------RSSTPLASPS---------NPKLPDLNPP 157

Query: 127 SQFSSQ--NPVGKDLN-LAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLM 186
             FSSQ  N   KDLN L+FP    H+  H L  +     SN   G+  RG+++F+P  M
Sbjct: 158 ILFSSQIPNKSNKDLNLLSFPVMQDHH-HHALELL----RSN---GVSSRGMNTFLPGQM 217

Query: 187 PNSN------------------NNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGF 246
            +SN                  NNN +  I+ H     G     ++  + +   N+ D  
Sbjct: 218 MDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHH----QGIGHNTINSNQRAQD-NNDDMN 277

Query: 247 GDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYWSGMLED 270
           G  R L PF ++ + S+   E  H      GNN    YW+GM  +
Sbjct: 278 GASRVLFPFSDMKELSSTTQEKSH------GNNT---YWNGMFSN 278

[Close]

BLAST of Clc06G02890 vs. TAIR 10
Match: AT3G61850.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-35
Identity = 110/285 (38.60%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  +  + ++++ +E +K+   P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRY
Sbjct: 38  NGGSGGNTNNTATMETRKAR--PQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRY 97

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PA 126
           WTEGGSLRNVP+GG SRKN+            SS P +S S         NPKLP+  P 
Sbjct: 98  WTEGGSLRNVPVGGSSRKNK-----------RSSTPLASPS---------NPKLPDLNPP 157

Query: 127 SQFSSQ--NPVGKDLN-LAFPCAMSHYADHQLSKVENVNNSNYNCGIGFRGLSSFIPNLM 186
             FSSQ  N   KDLN L+FP    H+  H L  +     SN   G+  RG+++F+P  M
Sbjct: 158 ILFSSQIPNKSNKDLNLLSFPVMQDHH-HHALELL----RSN---GVSSRGMNTFLPGQM 217

Query: 187 PNSN------------------NNNTNLGINSHGQYPTGFSLPDLDEFKPSLGINSVDGF 246
            +SN                  NNN +  I+ H     G     ++  + +   N+ D  
Sbjct: 218 MDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHH----QGIGHNTINSNQRAQD-NNDDMN 277

Query: 247 GDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYWSGMLED 270
           G  R L PF ++ + S+   E  H      GNN    YW+GM  +
Sbjct: 278 GASRVLFPFSDMKELSSTTQEKSH------GNNT---YWNGMFSN 278

[Close]

BLAST of Clc06G02890 vs. TAIR 10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.9e-35
Identity = 113/306 (36.93%), Postives = 155/306 (50.65%), Query Frame = 0


Query: 7   NSSTRSSPSSSSILEIKKSTKPPKDQLNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRY 66
           N  +  + ++++ +E +K+   P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRY
Sbjct: 50  NGGSGGNTNNTATMETRKAR--PQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRY 109

Query: 67  WTEGGSLRNVPIGGGSRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNY-PA 126
           WTEGGSLRNVP+GG SRKN+            SS P +S S         NPKLP+  P 
Sbjct: 110 WTEGGSLRNVPVGGSSRKNK-----------RSSTPLASPS---------NPKLPDLNPP 169

Query: 127 SQFSSQ--NPVGKDLN-LAFPCAMSHYADHQLS------KVENVNNSN------------ 186
             FSSQ  N   KDLN L+FP    H+  H +S      K+EN N S+            
Sbjct: 170 ILFSSQIPNKSNKDLNLLSFPVMQDHH-HHGMSHFFHMPKIENNNTSSSIYASSSPVSAL 229

Query: 187 ---YNCGIGFRGLSSFIPNLMPNSN------------------NNNTNLGINSHGQYPTG 246
               + G+  RG+++F+P  M +SN                  NNN +  I+ H     G
Sbjct: 230 ELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHH----QG 289

Query: 247 FSLPDLDEFKPSLGINSVDGFGDGRNLLPFQELNQQSAAPNEGDHQNERQQGNNISTGYW 270
                ++  + +   N+ D  G  R L PF ++ + S+   E  H      GNN    YW
Sbjct: 290 IGHNTINSNQRAQD-NNDDMNGASRVLFPFSDMKELSSTTQEKSH------GNNT---YW 318

[Close]

BLAST of Clc06G02890 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-34
Identity = 110/302 (36.42%), Postives = 155/302 (51.32%), Query Frame = 0


Query: 23  KKSTKPPKDQ-LNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGG 82
           ++  +P KDQ +NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+P+GGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 83  SRKNRSKSTTTITIMSNSSAPSSSSSSSSDHFNNNNPKLPNYPASQFSSQNP-----VGK 142
           SRKN+   +++  I +N S   S+  ++  H ++++  L +      + QNP       +
Sbjct: 102 SRKNKRSHSSSSDISNNHS--DSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQ 161

Query: 143 DLNLAF-PCAM--SHYAD--HQLSKVENVNNSNYN------CGIGFRGLSSFIPNLMPNS 202
           DLNL F P  M  +++ D  H +    N +N+N N      C          I N   N 
Sbjct: 162 DLNLGFSPHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNG 221

Query: 203 NNNNTN-LGINSHGQYPTGFSLPDLDEFKP----------SLGINSVDGF---------- 262
           N++N++ +G   H Q P        D +KP          SL  +  +GF          
Sbjct: 222 NSSNSSFMGFPVHNQDPASGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEG 281

Query: 263 ---GD---GRNLLPFQELN---QQSAAPNEGDHQNERQQGNN-----ISTGYWSGMLEDE 273
              GD   GR+L PF++L      S+A    D    +++G+       S GYW+GML   
Sbjct: 282 GEGGDDVNGRHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGG 341

The following BLAST results are available for this feature:

BLAST of Clc06G02890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875469.1	8.3e-108	80.88	dof zinc finger protein DOF1.8-like [Benincasa hispida]	[more]
KAG6592928.1	2.1e-74	63.67	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960172.1	1.5e-72	61.99	dof zinc finger protein DOF3.7-like [Cucurbita moschata]	[more]
XP_004140519.1	1.9e-72	68.50	dof zinc finger protein DOF3.7 [Cucumis sativus] >XP_011656836.1 dof zinc finger...	[more]
XP_023514890.1	1.9e-72	62.27	dof zinc finger protein DOF3.7-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc06G02890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43385	8.3e-34	38.60	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
Q8LAP8	4.1e-33	36.42	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q84JQ8	7.0e-33	36.64	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q9ZPY0	1.2e-27	33.94	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
Q8LE43	8.3e-26	40.69	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]

BLAST of Clc06G02890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6N0	7.2e-73	61.99	dof zinc finger protein DOF3.7-like OS=Cucurbita moschata OX=3662 GN=LOC11146099...	[more]
A0A0A0KAL6	9.4e-73	68.50	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G103520 PE...	[more]
A0A6J1KS65	7.9e-72	62.83	dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111498170 ...	[more]
A0A1S3CC55	6.3e-69	63.51	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103498802 PE=4 SV=1	[more]
E5GCN0	6.3e-69	63.51	F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Clc06G02890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61850.1	5.9e-35	38.60	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	5.9e-35	38.60	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.3	5.9e-35	38.60	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	5.9e-35	36.93	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	2.9e-34	36.42	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 32..87 e-value: 3.1E-32 score: 110.5
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 35..71
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 33..87 score: 28.714176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..131
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 16..268
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 16..268
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 23..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G02890.1	Clc06G02890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding