Clc06G00610 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G00610
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	chromo domain-containing protein LHP1-like
Location	ClcChr06: 536040 .. 540577 (-)
RNA-Seq Expression	Clc06G00610
Synteny	Clc06G00610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGCCAAGTAATTTCCCCTTTCAATTCACGCTATATCATCTACGATTTGCTCCACCAAGAAGATCAAACAAAAAGGATATCACGCCTTCAACCCCAAGAAGGAAAGGCCGGAAATTTGGAAAGAAAGAAAGAAACCCACATTCGATTTTGGCAGAAAAATGGGGGAAATCAATATATGATTCATATAGAAAAGGGGAAAGTTCAATAAATGCGGCAGCTCAGTCTCTTCAGTCTCAGTCTCAGCTCCCTTTGTAGTGACATTTGTCTTTGTTTTGGAAAAAAATTCTGAGAGCATGTGTAGAGAGAAAGAGGGAAGTAATAGAGAAAGAGGGTTTTAGGATGAAAATCAAAGGGGGAGGAGGGAGGAAGAAAAGTGCGAGCGCTTCGATGGAGGTTGTAGTGGGTTCAATTCAGGACGCCATGGATGCTGGTGAAGTTCATGGAGGCAGCTCGGATTACGCTAATGTGAAAACCAACAACAACCCCGTTAATGGCTCTGAGCCTTCGACTTCCCATTTGTCGGAGACCCATCAAGACCAAAACCTAGAAGACCCTGACGACGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGATAGCTTTTGCTGCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCCATTCGTCGGAAAAGGGTTCGCAAGGTATTCAATTTTCCTTCTGCTTTGGTCTTCTGGTTTCTTTGTTTATAGTTTGGCTTTTTCCCCTTTGGATTGTGAGAATGATGGGTTTATGAATGCTTGTACATTTACTGATTTTGGGGATTGTTGCTTTGCTATGGGAATGATTGATTCGAAAAACAGGGTCAGCTTCAGTACTTGATCAAATGGTAAGTGTCCCCTTCTGATGTTTGTTTACCTTGGTTTCTTAGAGCTTGAATGTGATAACTCAGATCACTAACCGAACCGAGCTTTTCTGAAGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACGTGCTCTGATTTCATCGAGGCGTTCGAACAGAGGTATTCTCTTCTATTTACTTCAGCATTATTTTGTTGGTAGCCGGAGGAAGCATTCTTTGGCATGTTATGCTGATTATAATATAAAGCTGTTGAACTTTGGCTTCCTTTATGAAGTTTAATGACGGGAAAGCAGCGGAAGCGGAAGCGAAAACATGGGATTGTTCATACTCAAACCAAGAAGAGGCAACACCTGCAGCGAGCCAGTTTTTCAACTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTTATGCTCATTCGCAATCCCTAGTTTATAATCACGAAGGAGAAAATAATGGAGATATAACTGCTCTTGAAAGAGGCAAGCAAACCGATATTGATAATGTGGGCAGGAATCCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGATCCCAAACTCAGTGAGCTTAAGGCAACAGTATTAACGAACATAGCCATTGGTGATAAGCTTGCAATCAATTTTCAAGATGCCAGGACAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGGCTATGTGGAACCAGTTACTGATAATCGGTGCATTGGGGCTAGAAGAAGGAAGTCTGGTTCGGTTAAAAGGTTTAGACAAGATTCAACTTTATCGGAACTGCCTATGTCTCAAAATGCAGACTTGACATTAGCTGTTGTAGAATCTGGTGTCAGAGTGGAACCAATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGCAATAACAAGGCTGATGACGGCAGGAATGAAACCAGCATCATCAAGATTATTAAACCTTTAGGCTATTCAGCTTCTGTGTCAAACAATATTCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTATGTCAGCTTTGTCTATCCTCTTCATTTATGGTGGATCTACTTCTCCCCATTTTTTCTGAGTATGAATGTAAAGTTTAAAAAGTTAAAATGTCAACCTATTGTATGAGCCTATGAGATCTAGGATGAACACAAGTCTCCATTTCATGCATTGTCAAGTATCTTGAACCTCATTTAATAAACAAATAAAACCAAGTTGAGAAGTTTTGTTCTCCTTCAAAAGTAAAGGATAGGGGCGTAAGCAGGTCATTTTTGGCCAAAGCTAACATATTGGTTTGAGAAAATTTAAAGACCAGTGCTGAAACTGACACTAAAAAATTCAAACCGAGGTCATCTTAGCCTTGGTTTTCCCCCTTAAATCCCTGTAGTTTAAAGTGGGCATCCTCAATTAAGAATGCAATTTACTAACTCTGAGGGGTGTTTTGGAATTGATTTTAAAACAGTTTAAAAGAGTGTTGTGATTTAGAATACAGCTGCCCCTGTGAATGTCTAACAGAGGTTGGTTTCTGCTTTTGTATTTCTTTGAAAAAATAGTAGTTATTATATAGTTTAAGAAGTTAATGGGATTATTGATTCCAGCCACCTAACTAGGGTATTAAAGTCACCAACTATGGGTTTCTTCTGCAACAAGGTCGAATGGTTGTCTTGTATTGTTGTAGTAACTTGTTTATCTTACATTCTTATGTGGTTCCTCACCCTGCCCCCCCCCCCCCCCCCCCCCTCAAATTACTTCTTTATCATCAGTTTTGAGGTTTTTCTTGCATGTTATATGTTTTAATTTTGGACATGTTTCTGAAGTCATGTATTATCTCTTAACCAGAAGACATATTTTCTTGTGTCTTGTTTCCTATATGTGGTGTGTGGATTATTTGATTGGAAACTTGGTGACTTTGCATTTTAAACGTGGAAATTGACCATTTTTCACATTTTGCTGGAATGTTTTTTTCTTTTCTTTTCTTTTCTTTTTGGGTAAATGTAGAGGTTTAGGATGGCATGCCAATGGCACATCTTGATTAATCTCATAGGACAAAACAAACACCTATACCTACAAAATAAGTGTTAAGACTGTTAGGAAACACTATTGTTTGAACGTATGGGGTTATTTCTTATTTCTTATTTATTTAAAACTATTTTCAGACATTAGACTCTTGCTGATTTTTGCTGGATAAGAAACACTTCATTGATGAATGAAATAAGCCTTCGAGTACAATAGACTCCTTGCTGATTAATCCTTTGAAATTTTTTCTAGTCTTAAGAAACATTTAACATTTTTTTGTGCATAATGTTTGTCTTGCATAGATGTTATTTAGCAATTAGCCAAATGTAAAATATGCATTAGGTCCTAAAGATTCTAGGTTAAACAACAAATTTAGTCCTTTAACGTTGAAGTTTGTGTCTCTTTGGTCCCTGAATTTGATATTTTTAAAATACACATATTTATTACACATAATTGGAAATTTCGGAGACCCATGGACATAAACTCAAATTTATATCTAATAGATCAATTAACTTTTAAAATTTCAAATTTGTTAAAGACCTATTAGCTACAAAAGCGAAAGTTCTAGGATTTATCAGATACAAAATTAGAAGTTTATGGACGTATTAGACACTTTCGAAAGTTCAAGGACCAAGTAGACAATAGACACAAACTACAATGTTAAGGGACTAAACTTGTACTTTAATCAAAATTCTAACTAAAGAACATTCATCTTCTAAATCACCTGGTCAAAATATTTCTTTCGTGCCATATTGGAGATGACAGTCTATAAGAACACATATACACTGTCAAGCTCTTTTATAAATAGTAAATACCATCTTTTCTGATTGAATCTTCTGTGTTTTCTTCTGAAATAAAAATAAACATTTTTATAACTTTTGAACTAAATATTCATGCTACTGTATATTTACTACTCTGGTACTTGGAAATTGAAATCCATCATTTGTGTCCAGAAACTGATTTGTGATTACTATGGAAACTAAAAACATGAAAGTATCATTCCTTCGAAATATTTGCACTCAAGATTGTTACAGAGATAAACCCGCCAGCCATTGGAGCCCTGTGTTTCTAACGTTTATGGATGAAAACGAATCTCATGTCAGTCTCCTCATGTTCTGAAATGACATTTTTTCTTGGTTTCGTTTTTTTAGGTCTGATGGAACAGAAGTGATGGTTGATAACAAGTTCCTCAAGGCTAACAATCCCCTGCTGGTAATTGGTTTTGTTCTTCACTGTATTATGCTTTTGAACTGCCTTAATCAATGCACAATTGTTTTTCCTTCAATTCTTACTGTCGTGATATCTAATATCAGTTGATCAACTTCTACGAGCAACATCTCCGCTATACTACCAGATCATCATAAATTGCAGATCTATGAAAGGTACGACTTATCGGGATCCCTGTTTAGTTAATTTTTCACATTTTAGTGCATTTGTACTGCCTCTTGGCGCTCAAGATCGAGCAGTAAGGAGATAGTTAAGCAAGGTCTGCAAATATTTAGCCAAAACAGTCTCCTTTCATCTACCTCAGGCTGTTCTGAACAGAGATTAGAAGTCAGAGGCTTACAATTATGA

mRNA sequence

AAAAAAAAAAAGCCAAGTAATTTCCCCTTTCAATTCACGCTATATCATCTACGATTTGCTCCACCAAGAAGATCAAACAAAAAGGATATCACGCCTTCAACCCCAAGAAGGAAAGGCCGGAAATTTGGAAAGAAAGAAAGAAACCCACATTCGATTTTGGCAGAAAAATGGGGGAAATCAATATATGATTCATATAGAAAAGGGGAAAGTTCAATAAATGCGGCAGCTCAGTCTCTTCAGTCTCAGTCTCAGCTCCCTTTGTAGTGACATTTGTCTTTGTTTTGGAAAAAAATTCTGAGAGCATGTGTAGAGAGAAAGAGGGAAGTAATAGAGAAAGAGGGTTTTAGGATGAAAATCAAAGGGGGAGGAGGGAGGAAGAAAAGTGCGAGCGCTTCGATGGAGGTTGTAGTGGGTTCAATTCAGGACGCCATGGATGCTGGTGAAGTTCATGGAGGCAGCTCGGATTACGCTAATGTGAAAACCAACAACAACCCCGTTAATGGCTCTGAGCCTTCGACTTCCCATTTGTCGGAGACCCATCAAGACCAAAACCTAGAAGACCCTGACGACGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGATAGCTTTTGCTGCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCCATTCGTCGGAAAAGGGTTCGCAAGGGTCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACGTGCTCTGATTTCATCGAGGCGTTCGAACAGAGTTTAATGACGGGAAAGCAGCGGAAGCGGAAGCGAAAACATGGGATTGTTCATACTCAAACCAAGAAGAGGCAACACCTGCAGCGAGCCAGTTTTTCAACTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTTATGCTCATTCGCAATCCCTAGTTTATAATCACGAAGGAGAAAATAATGGAGATATAACTGCTCTTGAAAGAGGCAAGCAAACCGATATTGATAATGTGGGCAGGAATCCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGATCCCAAACTCAGTGAGCTTAAGGCAACAGTATTAACGAACATAGCCATTGGTGATAAGCTTGCAATCAATTTTCAAGATGCCAGGACAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGGCTATGTGGAACCAGTTACTGATAATCGGTGCATTGGGGCTAGAAGAAGGAAGTCTGGTTCGGTTAAAAGGTTTAGACAAGATTCAACTTTATCGGAACTGCCTATGTCTCAAAATGCAGACTTGACATTAGCTGTTGTAGAATCTGGTGTCAGAGTGGAACCAATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGCAATAACAAGGCTGATGACGGCAGGAATGAAACCAGCATCATCAAGATTATTAAACCTTTAGGCTATTCAGCTTCTGTGTCAAACAATATTCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTCTGATGGAACAGAAGTGATGGTTGATAACAAGTTCCTCAAGGCTAACAATCCCCTGCTGTGCATTTGTACTGCCTCTTGGCGCTCAAGATCGAGCAGTAAGGAGATAGTTAAGCAAGGTCTGCAAATATTTAGCCAAAACAGTCTCCTTTCATCTACCTCAGGCTGTTCTGAACAGAGATTAGAAGTCAGAGGCTTACAATTATGA

Coding sequence (CDS)

ATGAAAATCAAAGGGGGAGGAGGGAGGAAGAAAAGTGCGAGCGCTTCGATGGAGGTTGTAGTGGGTTCAATTCAGGACGCCATGGATGCTGGTGAAGTTCATGGAGGCAGCTCGGATTACGCTAATGTGAAAACCAACAACAACCCCGTTAATGGCTCTGAGCCTTCGACTTCCCATTTGTCGGAGACCCATCAAGACCAAAACCTAGAAGACCCTGACGACGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGATAGCTTTTGCTGCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCCATTCGTCGGAAAAGGGTTCGCAAGGGTCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACGTGCTCTGATTTCATCGAGGCGTTCGAACAGAGTTTAATGACGGGAAAGCAGCGGAAGCGGAAGCGAAAACATGGGATTGTTCATACTCAAACCAAGAAGAGGCAACACCTGCAGCGAGCCAGTTTTTCAACTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTTATGCTCATTCGCAATCCCTAGTTTATAATCACGAAGGAGAAAATAATGGAGATATAACTGCTCTTGAAAGAGGCAAGCAAACCGATATTGATAATGTGGGCAGGAATCCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGATCCCAAACTCAGTGAGCTTAAGGCAACAGTATTAACGAACATAGCCATTGGTGATAAGCTTGCAATCAATTTTCAAGATGCCAGGACAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGGCTATGTGGAACCAGTTACTGATAATCGGTGCATTGGGGCTAGAAGAAGGAAGTCTGGTTCGGTTAAAAGGTTTAGACAAGATTCAACTTTATCGGAACTGCCTATGTCTCAAAATGCAGACTTGACATTAGCTGTTGTAGAATCTGGTGTCAGAGTGGAACCAATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGCAATAACAAGGCTGATGACGGCAGGAATGAAACCAGCATCATCAAGATTATTAAACCTTTAGGCTATTCAGCTTCTGTGTCAAACAATATTCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTCTGATGGAACAGAAGTGATGGTTGATAACAAGTTCCTCAAGGCTAACAATCCCCTGCTGTGCATTTGTACTGCCTCTTGGCGCTCAAGATCGAGCAGTAAGGAGATAGTTAAGCAAGGTCTGCAAATATTTAGCCAAAACAGTCTCCTTTCATCTACCTCAGGCTGTTCTGAACAGAGATTAGAAGTCAGAGGCTTACAATTATGA

Protein sequence

MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHLSETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHLQRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNGSAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVRVEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLCICTASWRSRSSSKEIVKQGLQIFSQNSLLSSTSGCSEQRLEVRGLQL

Homology

[Close]

BLAST of Clc06G00610 vs. NCBI nr
Match: XP_038874378.1 (chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo domain-containing protein LHP1 [Benincasa hispida])

HSP 1 Score: 788.9 bits (2036), Expect = 2.5e-224
Identity = 405/440 (92.05%), Postives = 418/440 (95.00%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MKIK GGGRKKSASASMEVVVGS QDAMD GEVHGG SDYANV TNNNP+N SEPSTSHL
Sbjct: 1   MKIK-GGGRKKSASASMEVVVGSAQDAMDGGEVHGGDSDYANVNTNNNPINVSEPSTSHL 60

Query: 61  SETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY 120
            ET QDQNLE+PDDDGEGDEEDEQDGD+ AFAAQRTNLDDGFYEIEAIRR+RVRKGQLQY
Sbjct: 61  LETDQDQNLEEPDDDGEGDEEDEQDGDDAAFAAQRTNLDDGFYEIEAIRRRRVRKGQLQY 120

Query: 121 LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHLQ 180
           LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLM GKQRKRKRKHG+VHTQTKKRQH Q
Sbjct: 121 LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMMGKQRKRKRKHGVVHTQTKKRQHQQ 180

Query: 181 RASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERGK 240
           RASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGE NGD+T +ERGK
Sbjct: 181 RASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTTIERGK 240

Query: 241 QTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNGS 300
           Q DIDN+GRN TQRSEWKKDEHEYDPKLSELK TVLTNIAIGDKLAINFQDARTTENNGS
Sbjct: 241 QADIDNIGRNATQRSEWKKDEHEYDPKLSELKTTVLTNIAIGDKLAINFQDARTTENNGS 300

Query: 301 AAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVRV 360
           AAGL KGG VEPVTDNRC GARRRKSGSVKRFRQDSTLS++PMSQNA+LTLAVVESGVRV
Sbjct: 301 AAGLYKGGSVEPVTDNRCTGARRRKSGSVKRFRQDSTLSDMPMSQNAELTLAVVESGVRV 360

Query: 361 EPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSD 420
           EPIGVENSGYHGESLSRNN+ DD RNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSD
Sbjct: 361 EPIGVENSGYHGESLSRNNRTDDARNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSD 420

Query: 421 GTEVMVDNKFLKANNPLLCI 441
           GTEV+VDNKFLKANNPLL I
Sbjct: 421 GTEVVVDNKFLKANNPLLLI 439

[Close]

BLAST of Clc06G00610 vs. NCBI nr
Match: XP_008460094.1 (PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo])

HSP 1 Score: 772.3 bits (1993), Expect = 2.5e-219
Identity = 396/441 (89.80%), Postives = 414/441 (93.88%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYAN   NNNP+NGSEPS SHL
Sbjct: 1   MKCKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANANINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLN+SSLTNPYAHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  IN QDARTTENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A+LTLAVVESGVR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVMVDNKFLKANNPLLCI 441
           DGTEV+VDNKFLKA NPLL I
Sbjct: 421 DGTEVVVDNKFLKAINPLLLI 441

[Close]

BLAST of Clc06G00610 vs. NCBI nr
Match: XP_004145010.1 (chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >XP_031743413.1 chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >KGN46259.1 hypothetical protein Csa_005559 [Cucumis sativus])

HSP 1 Score: 758.8 bits (1958), Expect = 2.8e-215
Identity = 390/441 (88.44%), Postives = 408/441 (92.52%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKS+S SMEV VGSIQDAMD+GEVHGG+SDYANV  NN P+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60

Query: 61  SETHQDQNLED-PDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+  DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GR  TQRSEWKKDEHEYDPKLSELKATVLTNIAI DK  INFQD+R TENNG
Sbjct: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLS LP SQNA+LTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNK DD RNE SI KIIKPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVMVDNKFLKANNPLLCI 441
           DGTEV+VDNKFLKA NPLL I
Sbjct: 421 DGTEVVVDNKFLKAINPLLLI 441

[Close]

BLAST of Clc06G00610 vs. NCBI nr
Match: TYK24517.1 (chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 739.2 bits (1907), Expect = 2.3e-209
Identity = 379/419 (90.45%), Postives = 395/419 (94.27%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYANV  NNNP+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  IN QDARTTENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A+LTLAVVESGVR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMR 419
           VEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+QDVLVTFVAMR
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMR 419

[Close]

BLAST of Clc06G00610 vs. NCBI nr
Match: KAA0039985.1 (chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 728.4 bits (1879), Expect = 4.1e-206
Identity = 378/431 (87.70%), Postives = 394/431 (91.42%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYANV  NNNP+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQ------------SLMTGKQRKRKRKHG 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQ             LMTGKQRKRKRKHG
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQRYSLLFTSALFCCLMTGKQRKRKRKHG 180

Query: 181 IVHTQTKKRQHLQRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG 240
           +VHTQTKKRQH QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG
Sbjct: 181 VVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG 240

Query: 241 ENNGDITALERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAI 300
           E NGD+TA+ERGKQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  I
Sbjct: 241 EKNGDVTAIERGKQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVI 300

Query: 301 NFQDARTTENNGSAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNA 360
           N QDARTTENNGSAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A
Sbjct: 301 NVQDARTTENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSA 360

Query: 361 DLTLAVVESGVRVEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNI 419
           +LTLAVVESGVRVEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+
Sbjct: 361 ELTLAVVESGVRVEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNM 420

[Close]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot
Match: Q946J8 (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-63
Identity = 172/407 (42.26%), Postives = 227/407 (55.77%), Query Frame = 0


Query: 61  SETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY 120
           +E   ++  ED D+D  GDEEDE +G+      +R  LD+GFYEIEAIRRKRVRKG++QY
Sbjct: 67  TEDGDEEEEEDEDEDDGGDEEDE-EGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQY 126

Query: 121 LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQ-RKRKRKHGIVHTQTKKRQHL 180
           LIKWRGWPETANTWEPLENL + +D I+AFE SL  GK  RKRKRK+   H+Q KK+Q L
Sbjct: 127 LIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQRL 186

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAP----LNMSSLTNPYAHSQSLVYNHEGENNGDITA 240
              S      +D   S+ +  LP  P    L+ SSL N    +++   +++ E N     
Sbjct: 187 TSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRDVEAKNAYVSNQVEANSGSVG 246

Query: 241 LERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTT 300
           + R  +  IDN              E EYDP L+EL+  V                    
Sbjct: 247 MARQVRL-IDN--------------EKEYDPTLNELRGPV-------------------- 306

Query: 301 ENNGSAAGLSKGGYVEPVTDN------------------RCIGARRRKSGSVKRFRQDST 360
            NN + AG S+GG +    DN                  R IGA+RRKSGSVKRF+QD +
Sbjct: 307 -NNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQDGS 366

Query: 361 LSE---LPMSQNADLTLAVVESGVRVEPIGVENSG-YHGESLSRNNKADDGRNETSIIKI 420
            S     P  QN    L  ++S  R+  +G E  G     +LS+  K +    E  I KI
Sbjct: 367 TSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIE----ELDITKI 426

Query: 421 IKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLCI 441
           +KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA+NP L I
Sbjct: 427 LKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLI 432

[Close]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot
Match: Q944N1 (Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-51
Identity = 141/379 (37.20%), Postives = 208/379 (54.88%), Query Frame = 0


Query: 73  DDDGEGDEEDEQ---------DGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQYLIK 132
           + +GEG+E+DE          DGD +A    +  L +GFYEIE +RR+R  KG++ YLIK
Sbjct: 55  EGEGEGEEKDEAPEVVRVEKGDGDGVA-KKVKPKLAEGFYEIETVRRRRTVKGKVYYLIK 114

Query: 133 WRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTK-KRQHLQRA 192
           WRGWPE+ANTWEP  NL +C+D I+A+E+SL +GK R+RKRK G   T    K+Q    A
Sbjct: 115 WRGWPESANTWEPETNLSSCTDIIDAYEESLKSGKLRRRKRKFGATQTHPMIKQQRRFSA 174

Query: 193 SFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERGKQT 252
             +TYN   V++ ++++  PS PLN+   T+       LV ++  E N  +  +  G   
Sbjct: 175 PVATYNGPAVKVRIIEEPTPSPPLNVLKATD-------LVDSNGSELNSKVDEVVNGNGL 234

Query: 253 DIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNGSAA 312
            +              ++++E + KLSELK    TN   G+ + I+         NG   
Sbjct: 235 RL--------------REQNELNLKLSELKGATSTN---GNPVDIS--------GNGLTN 294

Query: 313 GLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVRVEP 372
           G  K    E    +RC GA++RKSG V+RF++++T +    +Q+A          +   P
Sbjct: 295 GFPKVNGAEFYQSDRCTGAKKRKSGCVRRFKRETTSAVKDDTQDA----------LAGGP 354

Query: 373 IGV-ENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSDG 432
           +      G H   +     ADD ++  +I +++ P+ Y AS SN++ DV VTFVA R+DG
Sbjct: 355 LATFMQDGSHNHVM----VADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADG 386

Query: 433 TEVMVDNKFLKANNPLLCI 441
             V+VDNKFLK NNPLL I
Sbjct: 415 NLVLVDNKFLKMNNPLLLI 386

[Close]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot
Match: Q339W7 (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-33
Identity = 122/399 (30.58%), Postives = 181/399 (45.36%), Query Frame = 0


Query: 52  GSEPSTSHLSETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRT---------NLDDGF 111
           G E       E  +D    +  ++ E    +E+D   +   A+            L +G+
Sbjct: 47  GEERDEGEEEEEWEDAEEVEGGEESEQAAAEEEDSPLVVVEAEAAAPVVDGSPPKLAEGY 106

Query: 112 YEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQ-RK 171
           YEIE IRR+R+RKG+LQYL+KWRGWPE+ANTWEPLENL  CSD I+AFE  L + +  RK
Sbjct: 107 YEIEDIRRRRLRKGKLQYLVKWRGWPESANTWEPLENLSACSDIIDAFEMRLQSPRPGRK 166

Query: 172 RKRKHGIVHTQTKKRQHLQRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSL 231
           RKRK            H +R        +       + +      +    TN        
Sbjct: 167 RKRKITTTPVAGSNPSHGKRGRPRLDAKSHTRAPAPEPKQLPCRTSCRRATNC------- 226

Query: 232 VYNHEGENNGDITALERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAI 291
                  ++  +  L+       + + +N  Q           +   S +  T    + +
Sbjct: 227 -------SSKTVAGLDASGSVVRNQLAQNIVQ-----------EGSSSVISRTPCQELPL 286

Query: 292 GDKLAINFQDARTTENNGSAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSEL 351
             +L     +      + ++  L K   V P    +  GA++RKSG+V+RF Q+      
Sbjct: 287 SIRLTDQQNEHHLVNGSSNSENLVK---VPPSQGGQVTGAKKRKSGNVRRFEQNK----- 346

Query: 352 PMSQNADLTLAVVESGVRVEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSA 411
           P     +    VV      E +G    G  G+      K +   N   I KIIKP+ ++A
Sbjct: 347 PTQGQGECGALVV-----AEDVG-STEGETGD----KKKTEGCPNRVHITKIIKPVRFAA 402

Query: 412 SVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLCI 441
           +V+N++Q V +TF A+RSDG EVMVD+K LKANNPLL I
Sbjct: 407 AVNNDVQQVSITFKALRSDGQEVMVDDKELKANNPLLLI 402

[Close]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot
Match: P05205 (Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 9.6e-09
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 103 YEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKR 162
           Y +E I  +RVRKG+++Y +KW+G+PET NTWEP  NL  C D I+ +E S    +++  
Sbjct: 24  YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNL-DCQDLIQQYEAS-RKDEEKSA 83

Query: 163 KRKHGIVHTQTKKRQHLQRASFST 187
             K     +  K ++   RAS ST
Sbjct: 84  ASKKDRPSSSAKAKETQGRASSST 105

[Close]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot
Match: Q9DBY5 (Chromobox protein homolog 6 OS=Mus musculus OX=10090 GN=Cbx6 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-07
Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 103 YEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKR 162
           +  E+I ++R+RKG+++YL+KW+GW    +TWEP EN+   S  I AFEQ     K+R+R
Sbjct: 11  FAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENI-LDSRLIAAFEQ-----KERER 70

Query: 163 KRKHGIVHTQTKKRQHL--QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQS 222
           +  +G      K +  L   RA      ++DV  SV     PSA     S ++P  HS +
Sbjct: 71  E-LYGPKKRGPKPKTFLLKARAQAEALRISDVHFSV----KPSA-----SASSPKLHSSA 117

Query: 223 LVY 224
            V+
Sbjct: 131 AVH 117

[Close]

BLAST of Clc06G00610 vs. ExPASy TrEMBL
Match: A0A1S3CBU8 (chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC103499007 PE=4 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 1.2e-219
Identity = 396/441 (89.80%), Postives = 414/441 (93.88%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYAN   NNNP+NGSEPS SHL
Sbjct: 1   MKCKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANANINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLN+SSLTNPYAHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  IN QDARTTENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A+LTLAVVESGVR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVMVDNKFLKANNPLLCI 441
           DGTEV+VDNKFLKA NPLL I
Sbjct: 421 DGTEVVVDNKFLKAINPLLLI 441

[Close]

BLAST of Clc06G00610 vs. ExPASy TrEMBL
Match: A0A0A0KBN0 (Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.4e-215
Identity = 390/441 (88.44%), Postives = 408/441 (92.52%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKS+S SMEV VGSIQDAMD+GEVHGG+SDYANV  NN P+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60

Query: 61  SETHQDQNLED-PDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+  DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GR  TQRSEWKKDEHEYDPKLSELKATVLTNIAI DK  INFQD+R TENNG
Sbjct: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLS LP SQNA+LTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNK DD RNE SI KIIKPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVMVDNKFLKANNPLLCI 441
           DGTEV+VDNKFLKA NPLL I
Sbjct: 421 DGTEVVVDNKFLKAINPLLLI 441

[Close]

BLAST of Clc06G00610 vs. ExPASy TrEMBL
Match: A0A5D3DLL0 (Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00590 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 1.1e-209
Identity = 379/419 (90.45%), Postives = 395/419 (94.27%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYANV  NNNP+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHL 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHG+VHTQTKKRQH 
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGE NGD+TA+ERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNG 300
           KQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  IN QDARTTENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVR 360
           SAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A+LTLAVVESGVR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMR 419
           VEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+QDVLVTFVAMR
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMR 419

[Close]

BLAST of Clc06G00610 vs. ExPASy TrEMBL
Match: A0A5A7TEU9 (Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002670 PE=4 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 2.0e-206
Identity = 378/431 (87.70%), Postives = 394/431 (91.42%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MK KGG GRKKSAS SMEVVVGSIQDAMD+GEVHGG+SDYANV  NNNP+NGSEPS SHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  SETHQDQNLEDP-DDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQDQNLE+P DDDGEGDEEDEQDGDE AFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQ------------SLMTGKQRKRKRKHG 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQ             LMTGKQRKRKRKHG
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQRYSLLFTSALFCCLMTGKQRKRKRKHG 180

Query: 181 IVHTQTKKRQHLQRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG 240
           +VHTQTKKRQH QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG
Sbjct: 181 VVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG 240

Query: 241 ENNGDITALERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAI 300
           E NGD+TA+ERGKQTDIDN+GRN TQRSEWKKDEHEYDPKLSELKATVLTNIA+ DK  I
Sbjct: 241 EKNGDVTAIERGKQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVI 300

Query: 301 NFQDARTTENNGSAAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNA 360
           N QDARTTENNGSAAGLSKG +VEPVTDNRC GARRRKSGSV+RFR DSTLSELP SQ+A
Sbjct: 301 NVQDARTTENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSA 360

Query: 361 DLTLAVVESGVRVEPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNI 419
           +LTLAVVESGVRVEPIGVENSGYHGESLSRNNK DD RNETSIIKIIKPLGYSASVSNN+
Sbjct: 361 ELTLAVVESGVRVEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNM 420

[Close]

BLAST of Clc06G00610 vs. ExPASy TrEMBL
Match: A0A6J1KVS2 (chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111499147 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 4.4e-198
Identity = 368/440 (83.64%), Postives = 395/440 (89.77%), Query Frame = 0


Query: 1   MKIKGGGGRKKSASASMEVVVGSIQDAMDAGEVHGGSSDYANVKTNNNPVNGSEPSTSHL 60
           MKIK GG RKKSAS S EVV+G IQDAMD GEVHGG SDY ++ TNNNP+NG EPSTSHL
Sbjct: 1   MKIK-GGRRKKSASGSTEVVMGPIQDAMDGGEVHGGDSDYVDMNTNNNPINGGEPSTSHL 60

Query: 61  SETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY 120
           SETHQ+QNL++PD   E DE+DEQDG E AFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY
Sbjct: 61  SETHQEQNLDEPD---EQDEQDEQDGTEAAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY 120

Query: 121 LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGIVHTQTKKRQHLQ 180
           LIKWRGWPETANTWEPLENLHTCS+FIEAFEQSL++GKQRKRKRKHG+VH QTKKRQ  Q
Sbjct: 121 LIKWRGWPETANTWEPLENLHTCSEFIEAFEQSLISGKQRKRKRKHGVVHVQTKKRQ--Q 180

Query: 181 RASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGENNGDITALERGK 240
           RA+FSTYNVTDVEISVVDQRLPSAP+NM SLTNPYA S+S+VYNHEGE NGD+TA+ERG+
Sbjct: 181 RANFSTYNVTDVEISVVDQRLPSAPINMPSLTNPYARSRSVVYNHEGEKNGDVTAIERGR 240

Query: 241 QTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTTENNGS 300
             DIDNVGRN TQR E KK EHEYDPKLSELKAT LTNIAIGDKLAI+F DARTTENN  
Sbjct: 241 LADIDNVGRNATQRFEQKKAEHEYDPKLSELKATGLTNIAIGDKLAIDFHDARTTENNVL 300

Query: 301 AAGLSKGGYVEPVTDNRCIGARRRKSGSVKRFRQDSTLSELPMSQNADLTLAVVESGVRV 360
           AAGLSK G VE VT+NRC GA+RRKSGSVKRFRQDSTLSELP+ QN +LTLAVVES V V
Sbjct: 301 AAGLSKTGSVELVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESSVGV 360

Query: 361 EPIGVENSGYHGESLSRNNKADDGRNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRSD 420
           EPIGVENSGYHGE LSRNN+ D+ RNE SIIKI+KPLGYSASVSNNIQDVLVTFVAMRSD
Sbjct: 361 EPIGVENSGYHGERLSRNNRTDEARNEPSIIKIVKPLGYSASVSNNIQDVLVTFVAMRSD 420

Query: 421 GTEVMVDNKFLKANNPLLCI 441
           GTEVMVDNKFLKANNPLL I
Sbjct: 421 GTEVMVDNKFLKANNPLLLI 434

[Close]

BLAST of Clc06G00610 vs. TAIR 10
Match: AT5G17690.1 (like heterochromatin protein (LHP1) )

HSP 1 Score: 245.4 bits (625), Expect = 9.7e-65
Identity = 172/407 (42.26%), Postives = 227/407 (55.77%), Query Frame = 0


Query: 61  SETHQDQNLEDPDDDGEGDEEDEQDGDEIAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQY 120
           +E   ++  ED D+D  GDEEDE +G+      +R  LD+GFYEIEAIRRKRVRKG++QY
Sbjct: 67  TEDGDEEEEEDEDEDDGGDEEDE-EGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQY 126

Query: 121 LIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQ-RKRKRKHGIVHTQTKKRQHL 180
           LIKWRGWPETANTWEPLENL + +D I+AFE SL  GK  RKRKRK+   H+Q KK+Q L
Sbjct: 127 LIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQRL 186

Query: 181 QRASFSTYNVTDVEISVVDQRLPSAP----LNMSSLTNPYAHSQSLVYNHEGENNGDITA 240
              S      +D   S+ +  LP  P    L+ SSL N    +++   +++ E N     
Sbjct: 187 TSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRDVEAKNAYVSNQVEANSGSVG 246

Query: 241 LERGKQTDIDNVGRNPTQRSEWKKDEHEYDPKLSELKATVLTNIAIGDKLAINFQDARTT 300
           + R  +  IDN              E EYDP L+EL+  V                    
Sbjct: 247 MARQVRL-IDN--------------EKEYDPTLNELRGPV-------------------- 306

Query: 301 ENNGSAAGLSKGGYVEPVTDN------------------RCIGARRRKSGSVKRFRQDST 360
            NN + AG S+GG +    DN                  R IGA+RRKSGSVKRF+QD +
Sbjct: 307 -NNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQDGS 366

Query: 361 LSE---LPMSQNADLTLAVVESGVRVEPIGVENSG-YHGESLSRNNKADDGRNETSIIKI 420
            S     P  QN    L  ++S  R+  +G E  G     +LS+  K +    E  I KI
Sbjct: 367 TSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIE----ELDITKI 426

Query: 421 IKPLGYSASVSNNIQDVLVTFVAMRSDGTEVMVDNKFLKANNPLLCI 441
           +KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA+NP L I
Sbjct: 427 LKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLI 432

The following BLAST results are available for this feature:

BLAST of Clc06G00610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874378.1	2.5e-224	92.05	chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo...	[more]
XP_008460094.1	2.5e-219	89.80	PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo]	[more]
XP_004145010.1	2.8e-215	88.44	chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >XP_031743413...	[more]
TYK24517.1	2.3e-209	90.45	chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa]	[more]
KAA0039985.1	4.1e-206	87.70	chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa]	[more]

BLAST of Clc06G00610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946J8	1.4e-63	42.26	Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE...	[more]
Q944N1	1.6e-51	37.20	Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2	[more]
Q339W7	2.5e-33	30.58	Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica O...	[more]
P05205	9.6e-09	40.48	Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 ...	[more]
Q9DBY5	1.4e-07	35.77	Chromobox protein homolog 6 OS=Mus musculus OX=10090 GN=Cbx6 PE=1 SV=2	[more]

BLAST of Clc06G00610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBU8	1.2e-219	89.80	chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A0A0KBN0	1.4e-215	88.44	Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4...	[more]
A0A5D3DLL0	1.1e-209	90.45	Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7TEU9	2.0e-206	87.70	Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1KVS2	4.4e-198	83.64	chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Clc06G00610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17690.1	9.7e-65	42.26	like heterochromatin protein (LHP1)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 102..155 e-value: 7.2E-16 score: 68.7
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 103..162 score: 17.951302
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 103..152 e-value: 1.9E-15 score: 56.5
None	No IPR available	GENE3D	2.40.50.40		coord: 75..153 e-value: 4.0E-22 score: 79.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	PANTHER	PTHR47240:SF2	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 8..440
None	No IPR available	CDD	cd00024	CD_CSD	coord: 103..152 e-value: 4.24255E-22 score: 87.1472
IPR044251	Chromo domain-containing protein LHP1	PANTHER	PTHR47240	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 8..440
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 120..140
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 97..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G00610.2	Clc06G00610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
biological_process	GO:0006325	chromatin organization
cellular_component	GO:0000792	heterochromatin
cellular_component	GO:0005634	nucleus