Clc05G27260 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G27260
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein 5
Location	ClcChr05: 34608315 .. 34609375 (+)
RNA-Seq Expression	Clc05G27260
Synteny	Clc05G27260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACACTATTTTCAATATTGCATTTTGTTGTAAACCATTTCCAAATCTCAGTATAAAACAAACACCAATCTCTCCAAATTCCCTCAATTCAAATTCATTATATTTATTAAAAAAAAAATCTATTTTTTTTCTCTTTCTCTCTTCGCCATGATGGGAAAGGACTCATTGGTTTGTAATCTTGAAGAAGGGGAAAGTGGGTTATTTTCAGGAGGTTCTTGCATGGAGAAAAAAGTAAAACTTTTTGGAATTGAGCTCAACCCAGCAAAAAATTACAAGGAGGAAGAATTAGGCAGAAATTACAAAGGTTGTTGTAATATCGGTGAAGGAGATCATGAAAGTGTAAATTCTTCAACAACAGTGTGTTTTGAAAGATCATCAGAACAACAAGCTGCCATTGTAAAACAACCAAAATTTGAGTGTCAATATTGTTTGAAAGAGTTCACAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCTCACAAGAAAGAGAGATTGAAGAAGAAGAAGATGCAACTTCAAGCAAGAAAAGCTACTCTTAGTTACTATCTTCAGCCTTCTTTTCAAACTACTTCTAATAATTTTCTTTATGATTATCCTTCTTCTCCTCCTTGTTTCTTTTCCGATGATTCTTCTTCACAGATTAGTTTCAACCAAAACGACGCCCAACTCATCCATTTTGATGCTTCTCTCTCCTTTTTACCTCAACAACAACGGTCCTTCTTCACTTTGACACCGCCCGACATGTCGTCCGGAACCCCCAACCCTGTCGTTTTTCATTCTTTTTCTTCTTCTTCTTCTTCTTCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTCAATTAATTTTGCCTTACTTCATTAATTTTCCTCCTAATCTTGTACCAATCCAGACATTTTCATAAGCACATCAATACAAATATATCAATCTATAATTTTTTTATTATTATTTTTTTTTTCAGCAATATATACTTGTTTGTTTGTTGGTCTGCACCAGTTTTTAACTTTAAGCTAAACTCCCTCACATAACAGAAAATATGTCAAAATATTAAAAAAA

mRNA sequence

CACACACTATTTTCAATATTGCATTTTGTTGTAAACCATTTCCAAATCTCAGTATAAAACAAACACCAATCTCTCCAAATTCCCTCAATTCAAATTCATTATATTTATTAAAAAAAAAATCTATTTTTTTTCTCTTTCTCTCTTCGCCATGATGGGAAAGGACTCATTGGTTTGTAATCTTGAAGAAGGGGAAAGTGGGTTATTTTCAGGAGGTTCTTGCATGGAGAAAAAAGTAAAACTTTTTGGAATTGAGCTCAACCCAGCAAAAAATTACAAGGAGGAAGAATTAGGCAGAAATTACAAAGGTTGTTGTAATATCGGTGAAGGAGATCATGAAAGTGTAAATTCTTCAACAACAGTGTGTTTTGAAAGATCATCAGAACAACAAGCTGCCATTGTAAAACAACCAAAATTTGAGTGTCAATATTGTTTGAAAGAGTTCACAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCTCACAAGAAAGAGAGATTGAAGAAGAAGAAGATGCAACTTCAAGCAAGAAAAGCTACTCTTAGTTACTATCTTCAGCCTTCTTTTCAAACTACTTCTAATAATTTTCTTTATGATTATCCTTCTTCTCCTCCTTGTTTCTTTTCCGATGATTCTTCTTCACAGATTAGTTTCAACCAAAACGACGCCCAACTCATCCATTTTGATGCTTCTCTCTCCTTTTTACCTCAACAACAACGGTCCTTCTTCACTTTGACACCGCCCGACATGTCGTCCGGAACCCCCAACCCTGTCGTTTTTCATTCTTTTTCTTCTTCTTCTTCTTCTTCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTCAATTAATTTTGCCTTACTTCATTAATTTTCCTCCTAATCTTGTACCAATCCAGACATTTTCATAAGCACATCAATACAAATATATCAATCTATAATTTTTTTATTATTATTTTTTTTTTCAGCAATATATACTTGTTTGTTTGTTGGTCTGCACCAGTTTTTAACTTTAAGCTAAACTCCCTCACATAACAGAAAATATGTCAAAATATTAAAAAAA

Coding sequence (CDS)

ATGATGGGAAAGGACTCATTGGTTTGTAATCTTGAAGAAGGGGAAAGTGGGTTATTTTCAGGAGGTTCTTGCATGGAGAAAAAAGTAAAACTTTTTGGAATTGAGCTCAACCCAGCAAAAAATTACAAGGAGGAAGAATTAGGCAGAAATTACAAAGGTTGTTGTAATATCGGTGAAGGAGATCATGAAAGTGTAAATTCTTCAACAACAGTGTGTTTTGAAAGATCATCAGAACAACAAGCTGCCATTGTAAAACAACCAAAATTTGAGTGTCAATATTGTTTGAAAGAGTTCACAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCTCACAAGAAAGAGAGATTGAAGAAGAAGAAGATGCAACTTCAAGCAAGAAAAGCTACTCTTAGTTACTATCTTCAGCCTTCTTTTCAAACTACTTCTAATAATTTTCTTTATGATTATCCTTCTTCTCCTCCTTGTTTCTTTTCCGATGATTCTTCTTCACAGATTAGTTTCAACCAAAACGACGCCCAACTCATCCATTTTGATGCTTCTCTCTCCTTTTTACCTCAACAACAACGGTCCTTCTTCACTTTGACACCGCCCGACATGTCGTCCGGAACCCCCAACCCTGTCGTTTTTCATTCTTTTTCTTCTTCTTCTTCTTCTTCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTCAATTAA

Protein sequence

MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGDHESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQPSFQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDASLSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQLGLN

Homology

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BLAST of Clc05G27260 vs. NCBI nr
Match: XP_038893064.1 (zinc finger protein 5-like [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-95
Identity = 196/244 (80.33%), Postives = 208/244 (85.25%), Query Frame = 0


Query: 1   MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKN---YKEEELGRNYKGCCNI 60
           MMGKDSL CN EE ESGLFS GSCMEKKVKLFGIELNP+ N   +K++        C NI
Sbjct: 1   MMGKDSLSCNFEERESGLFSRGSCMEKKVKLFGIELNPSNNSYCFKDQ-------SCNNI 60

Query: 61  GEGDHESVNSS-TTVCFERSSEQQ------AAIVKQPKFECQYCLKEFTNSQALGGHQNA 120
           GEGDHESVNSS TTVCFE+  +QQ      A +VKQPKFECQYC KEFTNSQALGGHQNA
Sbjct: 61  GEGDHESVNSSTTTVCFEQQQQQQQQQQQEAILVKQPKFECQYCFKEFTNSQALGGHQNA 120

Query: 121 HKKERLKKKKMQLQARKATLSYYLQPS-FQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQ 180
           HKKERLKKKKMQLQARKATLSYYLQPS FQTT+NNFLY YPSSPPCFFSDDSSSQISFNQ
Sbjct: 121 HKKERLKKKKMQLQARKATLSYYLQPSNFQTTTNNFLYHYPSSPPCFFSDDSSSQISFNQ 180

Query: 181 NDAQLIHFDASLSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQ 234
           NDA+ IHFD+SLSFLPQ +RSFFTLTP DMSSG+PNPVVFH   SSSSSSSPSCKSLDLQ
Sbjct: 181 NDAEFIHFDSSLSFLPQPRRSFFTLTPADMSSGSPNPVVFH---SSSSSSSPSCKSLDLQ 234

[Close]

BLAST of Clc05G27260 vs. NCBI nr
Match: KGN51841.1 (hypothetical protein Csa_008039 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 5.5e-68
Identity = 175/271 (64.58%), Postives = 187/271 (69.00%), Query Frame = 0


Query: 1   MMGKDSLVCNLE-EGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNI-G 60
           MMGKDS  CN + E E GLF GG CMEKKVKLFGIELNP+ N+           C N   
Sbjct: 1   MMGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNF-----------CNNFHD 60

Query: 61  EGDHESVNSS----TTVCFERSS------------EQQAAIV---------KQPKFECQY 120
           +GDHESVNSS    TTVCF++ S            E+ A IV         K  KFECQY
Sbjct: 61  QGDHESVNSSTTTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQY 120

Query: 121 CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQPSFQTTSNNFLYDY---P 180
           CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATL+YYLQ S    +N+FLYDY    
Sbjct: 121 CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLTYYLQ-SNSNNNNHFLYDYDPNS 180

Query: 181 SSP--PCFFSDD---SSSQISFNQNDAQLIHFDASLSFLPQQQRS-FFTLTPPDMSSGTP 234
           SSP    F SDD   +SSQISFNQNDA LIHFD+SL FLPQQQR  FFT TPPDMSS  P
Sbjct: 181 SSPNSSFFISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRQPFFTFTPPDMSSRRP 240

[Close]

BLAST of Clc05G27260 vs. NCBI nr
Match: XP_008446260.1 (PREDICTED: zinc finger protein 5 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-66
Identity = 174/272 (63.97%), Postives = 189/272 (69.49%), Query Frame = 0


Query: 2   MGKDSLVCNL-EEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCN--IG 61
           MGKDS  C+  +E ESGLF+G  CMEKKVKLFGIELNP+ N             CN    
Sbjct: 1   MGKDSFCCDFDQEKESGLFAGSCCMEKKVKLFGIELNPSNN------------SCNKFHD 60

Query: 62  EGDHESVNSS----TTVCFERSS------------EQQAAIV-------KQPKFECQYCL 121
           +GDHESVNSS    TTVCF++ S            E+ A IV       K  KFECQYCL
Sbjct: 61  QGDHESVNSSTTTTTTVCFDQRSSSNQQEQEEDDQEEAANIVIINNNNRKATKFECQYCL 120

Query: 122 KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQPSFQTTSNNFLYDY------ 181
           KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATL+YYLQ +  +T+N+FLYDY      
Sbjct: 121 KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLTYYLQSN--STNNHFLYDYDNPNSS 180

Query: 182 PSSP--PCFFSDD---SSSQISFNQNDAQLIHFDASLSFLPQQQ-RSFFTLTPPDMSSGT 234
            SSP    F SDD   +SSQISFNQNDA LIHFD+SL FLPQQQ R FFT TPPDMSS  
Sbjct: 181 SSSPNSSFFISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRRPFFTFTPPDMSSRQ 240

[Close]

BLAST of Clc05G27260 vs. NCBI nr
Match: XP_022997670.1 (zinc finger protein 5-like [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-65
Identity = 158/236 (66.95%), Postives = 175/236 (74.15%), Query Frame = 0


Query: 1   MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEG 60
           MMGK SL CN E+ ESGL S GSCMEKK+KLFG ELNP+     EEL  N++   ++GE 
Sbjct: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFELNPS-----EELATNWRLKGSVGEA 60

Query: 61  DHESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKK 120
            +ESV+SSTTV F   SEQ  AI K PKFECQYC KEFTNSQALGGHQNAHKKERLKKKK
Sbjct: 61  -NESVSSSTTVSFGERSEQAMAINK-PKFECQYCFKEFTNSQALGGHQNAHKKERLKKKK 120

Query: 121 MQLQARKATLSYYLQPSFQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDAS 180
           MQLQARKATLSYY    FQT SNNFLY +PSS    ++ D SS ISFNQNDA+ IHF+  
Sbjct: 121 MQLQARKATLSYYYLHPFQTASNNFLYHFPSS----YTHDDSSLISFNQNDAEFIHFE-- 180

Query: 181 LSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSS---SPSCKSLDLQLGLN 234
            SFLP ++R  F+LTP D SS    PVVF S SSSSS     SPSCKSLDLQLGLN
Sbjct: 181 -SFLPPERR-LFSLTPADSSSAAAKPVVFQSSSSSSSLPPVVSPSCKSLDLQLGLN 221

[Close]

BLAST of Clc05G27260 vs. NCBI nr
Match: KAG7032161.1 (Zinc finger protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 9.7e-65
Identity = 152/233 (65.24%), Postives = 171/233 (73.39%), Query Frame = 0


Query: 1   MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEG 60
           MMGK SL CN E+ ESGL S GSCMEKK+KLFG ELNP+     EEL  N++   ++GE 
Sbjct: 1   MMGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPS-----EELATNWRLKGSVGEA 60

Query: 61  DHESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKK 120
            +ESV+SSTTV       +QA  + +PKFECQYC KEFTNSQALGGHQNAHKKERLKKKK
Sbjct: 61  -NESVSSSTTV------SEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKK 120

Query: 121 MQLQARKATLSYYLQPSFQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDAS 180
           MQLQARKATLSYY    FQT SNNFLY +PSS   +   D SSQISFNQNDA+ IHF+  
Sbjct: 121 MQLQARKATLSYYYLHPFQTASNNFLYHFPSS---YTHHDDSSQISFNQNDAEFIHFE-- 180

Query: 181 LSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQLGLN 234
            SFLP ++R  FTLTP D SS    PVVF S SS    +SPSCKSLDLQLGLN
Sbjct: 181 -SFLPPERR-LFTLTPADSSSAAAKPVVFQSSSSLPPVASPSCKSLDLQLGLN 214

[Close]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19
Identity = 84/232 (36.21%), Postives = 103/232 (44.40%), Query Frame = 0


Query: 16  SGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGDHESVNSSTTVCFER 75
           +G  S GS  +K +KLFG EL       E                  ESV+SST      
Sbjct: 10  TGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------------ESVSSSTNT---- 69

Query: 76  SSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQ 135
                 ++    + ECQYC KEF NSQALGGHQNAHKKERLKKK++QLQAR+A++ YYL 
Sbjct: 70  -----TSLTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLT 129

Query: 136 PSFQTTSNNFLYDYPSSPPCFFS----------------DDSSSQISFNQNDAQLIHFDA 195
              Q  + +F   Y +   C FS                   SSQI+F  ND        
Sbjct: 130 NHQQPITTSFQRQYKTPSYCAFSSMHVNNDQMGVYNEDWSSRSSQINFGNND-------- 189

Query: 196 SLSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQLG 232
           +   L +Q      L         PN + F    SS S    S  SLDL LG
Sbjct: 190 TCQDLNEQSGEMGKL-----YGVRPNMIQFQRDLSSRSDQMRSINSLDLHLG 205

[Close]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.1e-08
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 28  KVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGDHESVNSSTTVCFERSSEQQAAIVKQP 87
           ++KLFG  ++  +++ ++ +  N     +   G+  + +S  +    RS         + 
Sbjct: 14  RLKLFGFSVDGEEDFSDQSVKTNLSS-VSPERGEFPAGSSGRSGGGVRSRGGGGG-GGER 73

Query: 88  KFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQA-RKATLSYYLQPSFQTTSNNFL 147
           K+ECQYC +EF NSQALGGHQNAHKKER + K+ QLQA R A  ++    S      N +
Sbjct: 74  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 133

Query: 148 YDYPSSPPCFFSDDSSSQ 165
               + PP   S  +  Q
Sbjct: 134 VSAFAPPPHLLSSSAVPQ 149

[Close]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 37/82 (45.12%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 88  KFECQYCLKEFTNSQALGGHQNAHKKER-LKKKKMQLQARKATLSYYLQPSFQTTSNNF- 147
           K+ECQYC +EF NSQALGGHQNAHKKER L K+   L  R     +   P      + F 
Sbjct: 40  KYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFA 99

Query: 148 ----LYDYPSSPPCFFSDDSSS 164
               L   P  PP      SSS
Sbjct: 100 PLPHLLSQPHPPPHMMLSPSSS 121

[Close]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 76  SSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQ 135
           +S    +I    +FEC YC + F  SQALGGHQNAHK+ER      QL A++   SY+  
Sbjct: 78  NSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRER------QL-AKRGVSSYFYH 137

Query: 136 PSFQTTSNNFLY-DYPS 152
           P     +N + Y  YPS
Sbjct: 138 PD----NNPYSYRHYPS 143

[Close]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 74  ERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKER-LKKKKMQL 124
           E+  +QQ ++ K+  F C YC ++F +SQALGGHQNAHK+ER L K+ M++
Sbjct: 71  EQQQQQQPSVSKR-VFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]

BLAST of Clc05G27260 vs. ExPASy TrEMBL
Match: A0A0A0KVQ6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G603380 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.7e-68
Identity = 175/271 (64.58%), Postives = 187/271 (69.00%), Query Frame = 0


Query: 1   MMGKDSLVCNLE-EGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNI-G 60
           MMGKDS  CN + E E GLF GG CMEKKVKLFGIELNP+ N+           C N   
Sbjct: 1   MMGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNF-----------CNNFHD 60

Query: 61  EGDHESVNSS----TTVCFERSS------------EQQAAIV---------KQPKFECQY 120
           +GDHESVNSS    TTVCF++ S            E+ A IV         K  KFECQY
Sbjct: 61  QGDHESVNSSTTTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQY 120

Query: 121 CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQPSFQTTSNNFLYDY---P 180
           CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATL+YYLQ S    +N+FLYDY    
Sbjct: 121 CLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLTYYLQ-SNSNNNNHFLYDYDPNS 180

Query: 181 SSP--PCFFSDD---SSSQISFNQNDAQLIHFDASLSFLPQQQRS-FFTLTPPDMSSGTP 234
           SSP    F SDD   +SSQISFNQNDA LIHFD+SL FLPQQQR  FFT TPPDMSS  P
Sbjct: 181 SSPNSSFFISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRQPFFTFTPPDMSSRRP 240

[Close]

BLAST of Clc05G27260 vs. ExPASy TrEMBL
Match: A0A1S3BEM4 (zinc finger protein 5 OS=Cucumis melo OX=3656 GN=LOC103489043 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.0e-67
Identity = 174/272 (63.97%), Postives = 189/272 (69.49%), Query Frame = 0


Query: 2   MGKDSLVCNL-EEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCN--IG 61
           MGKDS  C+  +E ESGLF+G  CMEKKVKLFGIELNP+ N             CN    
Sbjct: 1   MGKDSFCCDFDQEKESGLFAGSCCMEKKVKLFGIELNPSNN------------SCNKFHD 60

Query: 62  EGDHESVNSS----TTVCFERSS------------EQQAAIV-------KQPKFECQYCL 121
           +GDHESVNSS    TTVCF++ S            E+ A IV       K  KFECQYCL
Sbjct: 61  QGDHESVNSSTTTTTTVCFDQRSSSNQQEQEEDDQEEAANIVIINNNNRKATKFECQYCL 120

Query: 122 KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQPSFQTTSNNFLYDY------ 181
           KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATL+YYLQ +  +T+N+FLYDY      
Sbjct: 121 KEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLTYYLQSN--STNNHFLYDYDNPNSS 180

Query: 182 PSSP--PCFFSDD---SSSQISFNQNDAQLIHFDASLSFLPQQQ-RSFFTLTPPDMSSGT 234
            SSP    F SDD   +SSQISFNQNDA LIHFD+SL FLPQQQ R FFT TPPDMSS  
Sbjct: 181 SSSPNSSFFISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRRPFFTFTPPDMSSRQ 240

[Close]

BLAST of Clc05G27260 vs. ExPASy TrEMBL
Match: A0A6J1KAH9 (zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 7.3e-66
Identity = 158/236 (66.95%), Postives = 175/236 (74.15%), Query Frame = 0


Query: 1   MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEG 60
           MMGK SL CN E+ ESGL S GSCMEKK+KLFG ELNP+     EEL  N++   ++GE 
Sbjct: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFELNPS-----EELATNWRLKGSVGEA 60

Query: 61  DHESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKK 120
            +ESV+SSTTV F   SEQ  AI K PKFECQYC KEFTNSQALGGHQNAHKKERLKKKK
Sbjct: 61  -NESVSSSTTVSFGERSEQAMAINK-PKFECQYCFKEFTNSQALGGHQNAHKKERLKKKK 120

Query: 121 MQLQARKATLSYYLQPSFQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDAS 180
           MQLQARKATLSYY    FQT SNNFLY +PSS    ++ D SS ISFNQNDA+ IHF+  
Sbjct: 121 MQLQARKATLSYYYLHPFQTASNNFLYHFPSS----YTHDDSSLISFNQNDAEFIHFE-- 180

Query: 181 LSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSS---SPSCKSLDLQLGLN 234
            SFLP ++R  F+LTP D SS    PVVF S SSSSS     SPSCKSLDLQLGLN
Sbjct: 181 -SFLPPERR-LFSLTPADSSSAAAKPVVFQSSSSSSSLPPVVSPSCKSLDLQLGLN 221

[Close]

BLAST of Clc05G27260 vs. ExPASy TrEMBL
Match: A0A6J1GY76 (zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 152/233 (65.24%), Postives = 170/233 (72.96%), Query Frame = 0


Query: 1   MMGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEG 60
           MMGK SL CN E+ ESGL S GSCMEKK+KLFG ELNP+     EEL  N++   ++GE 
Sbjct: 1   MMGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPS-----EELATNWRLKGSVGEA 60

Query: 61  DHESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKK 120
            +ESV+SSTTV       +QA  + +PKFECQYC KEFTNSQALGGHQNAHKKERLKKKK
Sbjct: 61  -NESVSSSTTV------SEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKK 120

Query: 121 MQLQARKATLSYYLQPSFQTTSNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDAS 180
           MQLQARKATLSYY    FQT SNNFLY +PSS       D SSQISFNQNDA+ IHF+  
Sbjct: 121 MQLQARKATLSYYYLHPFQTASNNFLYHFPSS---HTHHDDSSQISFNQNDAEFIHFE-- 180

Query: 181 LSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQLGLN 234
            SFLP ++R  FTLTP D SS    PVVF S SS    +SPSCKSLDLQLGLN
Sbjct: 181 -SFLPPERR-LFTLTPADSSSAAAKPVVFQSSSSLPPVASPSCKSLDLQLGLN 214

[Close]

BLAST of Clc05G27260 vs. ExPASy TrEMBL
Match: A0A6J1DBL2 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.4e-61
Identity = 149/239 (62.34%), Postives = 164/239 (68.62%), Query Frame = 0


Query: 2   MGKDSLVCNLEEGESGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGD 61
           MG +S  CNLEEGESGLFS G C EKKVKLFG EL P+KN                GEGD
Sbjct: 1   MGNESWGCNLEEGESGLFSSGGCGEKKVKLFGFELKPSKN-----------DMSGSGEGD 60

Query: 62  HESVNSSTTVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKM 121
            ESVNSSTTV     SE    ++K+PKFECQYC KEFTNSQALGGHQNAHKKERLKKK+M
Sbjct: 61  -ESVNSSTTV---ERSEAAIVVIKRPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKRM 120

Query: 122 QLQARKATLSYYLQP-SFQTT-SNNFLYDYPSSPPCFFSDDSSSQISFNQNDAQLIHFDA 181
           QLQARKATLSYYL P  FQT+ +NNFLY +            SSQISF+ NDA+ IHFD 
Sbjct: 121 QLQARKATLSYYLHPFQFQTSNNNNFLYSH-----------DSSQISFSPNDAEFIHFD- 180

Query: 182 SLSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSS-----SSPSCKSLDLQLGLN 234
                  Q+R  FTLT PD SSG PNP+VF+S SSSSSS      +PSCKSLDL LGLN
Sbjct: 181 ------PQERRLFTLTQPDTSSGPPNPLVFYSSSSSSSSLPLSKQNPSCKSLDLHLGLN 206

[Close]

BLAST of Clc05G27260 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-20
Identity = 84/232 (36.21%), Postives = 103/232 (44.40%), Query Frame = 0


Query: 16  SGLFSGGSCMEKKVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGDHESVNSSTTVCFER 75
           +G  S GS  +K +KLFG EL       E                  ESV+SST      
Sbjct: 10  TGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------------ESVSSSTNT---- 69

Query: 76  SSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQ 135
                 ++    + ECQYC KEF NSQALGGHQNAHKKERLKKK++QLQAR+A++ YYL 
Sbjct: 70  -----TSLTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLT 129

Query: 136 PSFQTTSNNFLYDYPSSPPCFFS----------------DDSSSQISFNQNDAQLIHFDA 195
              Q  + +F   Y +   C FS                   SSQI+F  ND        
Sbjct: 130 NHQQPITTSFQRQYKTPSYCAFSSMHVNNDQMGVYNEDWSSRSSQINFGNND-------- 189

Query: 196 SLSFLPQQQRSFFTLTPPDMSSGTPNPVVFHSFSSSSSSSSPSCKSLDLQLG 232
           +   L +Q      L         PN + F    SS S    S  SLDL LG
Sbjct: 190 TCQDLNEQSGEMGKL-----YGVRPNMIQFQRDLSSRSDQMRSINSLDLHLG 205

[Close]

BLAST of Clc05G27260 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-09
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 28  KVKLFGIELNPAKNYKEEELGRNYKGCCNIGEGDHESVNSSTTVCFERSSEQQAAIVKQP 87
           ++KLFG  ++  +++ ++ +  N     +   G+  + +S  +    RS         + 
Sbjct: 14  RLKLFGFSVDGEEDFSDQSVKTNLSS-VSPERGEFPAGSSGRSGGGVRSRGGGGG-GGER 73

Query: 88  KFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQA-RKATLSYYLQPSFQTTSNNFL 147
           K+ECQYC +EF NSQALGGHQNAHKKER + K+ QLQA R A  ++    S      N +
Sbjct: 74  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 133

Query: 148 YDYPSSPPCFFSDDSSSQ 165
               + PP   S  +  Q
Sbjct: 134 VSAFAPPPHLLSSSAVPQ 149

[Close]

BLAST of Clc05G27260 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 37/82 (45.12%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 88  KFECQYCLKEFTNSQALGGHQNAHKKER-LKKKKMQLQARKATLSYYLQPSFQTTSNNF- 147
           K+ECQYC +EF NSQALGGHQNAHKKER L K+   L  R     +   P      + F 
Sbjct: 40  KYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFA 99

Query: 148 ----LYDYPSSPPCFFSDDSSS 164
               L   P  PP      SSS
Sbjct: 100 PLPHLLSQPHPPPHMMLSPSSS 121

[Close]

BLAST of Clc05G27260 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-07
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 59  EGDHESVNSST-TVCFERSSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLK 118
           E    S +S T  V   R+S    + V +  +EC +C + FTN+QALGGH N H+++RL 
Sbjct: 4   ERSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLN 63

Query: 119 KKKMQLQA 126
           K K+Q  A
Sbjct: 64  KAKVQNDA 71

[Close]

BLAST of Clc05G27260 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07
Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 76  SSEQQAAIVKQPKFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYLQ 135
           +S    +I    +FEC YC + F  SQALGGHQNAHK+ER      QL A++   SY+  
Sbjct: 78  NSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRER------QL-AKRGVSSYFYH 137

Query: 136 PSFQTTSNNFLY-DYPS 152
           P     +N + Y  YPS
Sbjct: 138 PD----NNPYSYRHYPS 143

The following BLAST results are available for this feature:

BLAST of Clc05G27260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893064.1	1.4e-95	80.33	zinc finger protein 5-like [Benincasa hispida]	[more]
KGN51841.1	5.5e-68	64.58	hypothetical protein Csa_008039 [Cucumis sativus]	[more]
XP_008446260.1	1.0e-66	63.97	PREDICTED: zinc finger protein 5 [Cucumis melo]	[more]
XP_022997670.1	1.5e-65	66.95	zinc finger protein 5-like [Cucurbita maxima]	[more]
KAG7032161.1	9.7e-65	65.24	Zinc finger protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc05G27260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39264	2.2e-19	36.21	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9C9H1	5.1e-08	33.33	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	3.3e-07	45.12	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q84WI0	1.1e-05	42.86	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]
Q39263	1.8e-05	50.98	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]

BLAST of Clc05G27260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVQ6	2.7e-68	64.58	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G603380 P...	[more]
A0A1S3BEM4	5.0e-67	63.97	zinc finger protein 5 OS=Cucumis melo OX=3656 GN=LOC103489043 PE=4 SV=1	[more]
A0A6J1KAH9	7.3e-66	66.95	zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1	[more]
A0A6J1GY76	1.4e-64	65.24	zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV...	[more]
A0A6J1DBL2	5.4e-61	62.34	zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 S...	[more]

BLAST of Clc05G27260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10480.1	1.6e-20	36.21	zinc finger protein 5	[more]
AT1G68360.1	3.6e-09	33.33	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	2.3e-08	45.12	zinc finger protein 6	[more]
AT5G43540.1	4.4e-07	41.18	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	7.6e-07	42.86	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 89..114 e-value: 3.5E-6 score: 26.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 66..143 e-value: 6.3E-7 score: 31.1
None	No IPR available	PANTHER	PTHR46353:SF5	ZINC FINGER PROTEIN 5	coord: 12..233
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 12..233
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 91..111
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 89..116 score: 11.406082
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 86..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G27260.1	Clc05G27260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding