Clc05G25490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G25490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Nudix hydrolase
Location	ClcChr05: 33234254 .. 33235090 (-)
RNA-Seq Expression	Clc05G25490
Synteny	Clc05G25490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGCCCTATAAATAGACCATCTTCCATAGTCTTTTAACTTCAAACTCAAAAGAGAAAGCCTTCTTTTCCATTTTTATTCTCTCCCCTAACATCTGAGATTCTACGGTTTGAACAACTTCAAACATGGTGTCTGCGGCTGAACAGAGTAACGGTTCAAAATTAGATCATACGGCGGCGCCGTCCCCCCAAGTAGCCGTGGCCATTTGTTTGTTGCGTGGTAAATGGATTCTTATGGGACGTCGACTTGTGTCCATTGGCAACTCCAAATATTCTCTCCCAAGTGGCCATCTCGAATTTGGTTCGTTCATTCTCCTTTCGGTTCAAGATAATACGTTTAAATATTGACCGTTAACCGTAATATCTATCTTTTGTCAGGAGAGAAATTTGAAGAATGTGCAGCAAGAGAAATTAAAGAAGAGACGGGTCTAGATATCCACAAGATCGAGTTCTTAACAGTGACTAATAATTTGTTTATGAACCAACCATGTCCAGCCCATTATGTGGTGGTGTTTATGCGAGCAGTACTCACAGATCCCACACAAACTCCCCTCAATCTTGAGCCTGAGAAATGTGATGGGTGGGATTGGTATGAATGGGACAATCTGCCCCAACCTCTCTTTAGTCCCATCAAGAAAATGGTGATGGATGGCTTTAATCCTTTCCCACAATAATCTAAGCTATCCATTCTTGGGTTTGAGAAGGAAAGAATGTTATGTTCCAGCTCTACTTTAACTCTAAGATTGCATTTTTATTTAATATTAACGTGTTGCACATTTTAAGGAATTTGGCCTCCATGTTGTCGTGTGATTGAAATTGAAATTCAAACTATAGATGT

mRNA sequence

TGTGGCCCTATAAATAGACCATCTTCCATAGTCTTTTAACTTCAAACTCAAAAGAGAAAGCCTTCTTTTCCATTTTTATTCTCTCCCCTAACATCTGAGATTCTACGGTTTGAACAACTTCAAACATGGTGTCTGCGGCTGAACAGAGTAACGGTTCAAAATTAGATCATACGGCGGCGCCGTCCCCCCAAGTAGCCGTGGCCATTTGTTTGTTGCGTGGTAAATGGATTCTTATGGGACGTCGACTTGTGTCCATTGGCAACTCCAAATATTCTCTCCCAAGTGGCCATCTCGAATTTGGAGAGAAATTTGAAGAATGTGCAGCAAGAGAAATTAAAGAAGAGACGGGTCTAGATATCCACAAGATCGAGTTCTTAACAGTGACTAATAATTTGTTTATGAACCAACCATGTCCAGCCCATTATGTGGTGGTGTTTATGCGAGCAGTACTCACAGATCCCACACAAACTCCCCTCAATCTTGAGCCTGAGAAATGTGATGGGTGGGATTGGTATGAATGGGACAATCTGCCCCAACCTCTCTTTAGTCCCATCAAGAAAATGGTGATGGATGGCTTTAATCCTTTCCCACAATAATCTAAGCTATCCATTCTTGGGTTTGAGAAGGAAAGAATGTTATGTTCCAGCTCTACTTTAACTCTAAGATTGCATTTTTATTTAATATTAACGTGTTGCACATTTTAAGGAATTTGGCCTCCATGTTGTCGTGTGATTGAAATTGAAATTCAAACTATAGATGT

Coding sequence (CDS)

ATGGTGTCTGCGGCTGAACAGAGTAACGGTTCAAAATTAGATCATACGGCGGCGCCGTCCCCCCAAGTAGCCGTGGCCATTTGTTTGTTGCGTGGTAAATGGATTCTTATGGGACGTCGACTTGTGTCCATTGGCAACTCCAAATATTCTCTCCCAAGTGGCCATCTCGAATTTGGAGAGAAATTTGAAGAATGTGCAGCAAGAGAAATTAAAGAAGAGACGGGTCTAGATATCCACAAGATCGAGTTCTTAACAGTGACTAATAATTTGTTTATGAACCAACCATGTCCAGCCCATTATGTGGTGGTGTTTATGCGAGCAGTACTCACAGATCCCACACAAACTCCCCTCAATCTTGAGCCTGAGAAATGTGATGGGTGGGATTGGTATGAATGGGACAATCTGCCCCAACCTCTCTTTAGTCCCATCAAGAAAATGGTGATGGATGGCTTTAATCCTTTCCCACAATAA

Protein sequence

MVSAAEQSNGSKLDHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ

Homology

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BLAST of Clc05G25490 vs. NCBI nr
Match: XP_038892917.1 (geranyl diphosphate phosphohydrolase [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 5.9e-74
Identity = 139/162 (85.80%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL------DHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSG 60
           MVSAAEQ+NGSKL         AAP+PQVAVAICLLRGK ILMGRRLVSIGNSKYSLPSG
Sbjct: 1   MVSAAEQNNGSKLVEAKEDQAAAAPTPQVAVAICLLRGKRILMGRRLVSIGNSKYSLPSG 60

Query: 61  HLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQ 120
           HLEFGE FEECAARE+KEETGLDI KIEFL VTNNLF++QP  AHYVVVF+RAVL DPTQ
Sbjct: 61  HLEFGENFEECAARELKEETGLDIEKIEFLKVTNNLFLDQPRQAHYVVVFVRAVLADPTQ 120

Query: 121 TPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ 157
           TPLNLEPEKCDGWDWYEWDNLPQPLF PIKKMVMDGFNPFPQ
Sbjct: 121 TPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFPQ 162

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BLAST of Clc05G25490 vs. NCBI nr
Match: XP_008446534.1 (PREDICTED: nudix hydrolase 1-like [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL------DHTAA-PSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPS 60
           MVSAAEQ N   L      DH AA PSPQVAVAICLLR K ILMGRRLVSIGNSKYSLPS
Sbjct: 48  MVSAAEQINSPTLAKANEDDHVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLPS 107

Query: 61  GHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPT 120
           GHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDPT
Sbjct: 108 GHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPT 167

Query: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ 157
           QTPLNLEPEKCDGWDWYEWDNLPQPLF PIKKMVMDGFNPFPQ
Sbjct: 168 QTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFPQ 210

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BLAST of Clc05G25490 vs. NCBI nr
Match: KAA0034516.1 (nudix hydrolase 1-like [Cucumis melo var. makuwa] >TYK09070.1 nudix hydrolase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL------DHTAA-PSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPS 60
           MVSAAEQ N   L      DH AA PSPQVAVAICLLR K ILMGRRLVSIGNSKYSLPS
Sbjct: 1   MVSAAEQINSPTLAKANEDDHVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLPS 60

Query: 61  GHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPT 120
           GHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDPT
Sbjct: 61  GHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPT 120

Query: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ 157
           QTPLNLEPEKCDGWDWYEWDNLPQPLF PIKKMVMDGFNPFPQ
Sbjct: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFPQ 163

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BLAST of Clc05G25490 vs. NCBI nr
Match: XP_004135122.1 (geranyl diphosphate phosphohydrolase [Cucumis sativus] >KGN52033.1 hypothetical protein Csa_008820 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 133/163 (81.60%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL--------DHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLP 60
           MVSAA+Q+N  KL         H A+PSPQVAVAICLL+ K ILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDP 120
           SGHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFP 156
           TQTP+NLEPEKCDGWDWYEWD LP PLF PIKKMV DGFNPFP
Sbjct: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163

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BLAST of Clc05G25490 vs. NCBI nr
Match: XP_023541815.1 (geranyl diphosphate phosphohydrolase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 5.3e-67
Identity = 125/158 (79.11%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MVSAAEQSNGSK---LDHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLE 60
           MVS  +Q NG+K   L     PSPQVAVAICLLRGK +LMGRRLVSIGNSKYSLPSGHLE
Sbjct: 1   MVSEVQQINGTKTKTLVVAPPPSPQVAVAICLLRGKSVLMGRRLVSIGNSKYSLPSGHLE 60

Query: 61  FGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPL 120
           FGE FEECAARE+KEETGLDI K+EFL VTNNLF++QP PAHYVVVF+RAVL DP QTPL
Sbjct: 61  FGENFEECAAREMKEETGLDIEKVEFLKVTNNLFLDQPTPAHYVVVFVRAVLADPMQTPL 120

Query: 121 NLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFP 156
           NLEP+KC GWDWYEWD+LP+PLF PIK MVM+GFNPFP
Sbjct: 121 NLEPDKCGGWDWYEWDSLPKPLFGPIKAMVMEGFNPFP 158

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BLAST of Clc05G25490 vs. ExPASy Swiss-Prot
Match: M4I1C6 (Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.4e-54
Identity = 96/138 (69.57%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 18  APSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETGLD 77
           A S +VAV +CLLRG+ +L+GRR  S+G+S +SLPSGHLEFGE FEECAARE+KEET LD
Sbjct: 12  AGSIKVAVVVCLLRGQNVLLGRRRSSLGDSTFSLPSGHLEFGESFEECAARELKEETDLD 71

Query: 78  IHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPLNLEPEKCDGWDWYEWDNLPQ 137
           I KIE LTVTNNLF+++  P+ YV VFMRAVL DP Q P N+EPE CDGW WYEWDNLP+
Sbjct: 72  IGKIELLTVTNNLFLDEAKPSQYVAVFMRAVLADPRQEPQNIEPEFCDGWGWYEWDNLPK 131

Query: 138 PLFSPIKKMVMDGFNPFP 156
           PLF P+  +V DGFNPFP
Sbjct: 132 PLFWPLDNVVQDGFNPFP 149

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BLAST of Clc05G25490 vs. ExPASy Swiss-Prot
Match: Q9CA40 (Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.2e-50
Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 16  TAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETG 75
           T    P+VAV + +L G  IL+GRR  SIGNS ++LP GHLEFGE FEECAARE+ EETG
Sbjct: 3   TGEAIPRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETG 62

Query: 76  LDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPLNLEPEKCDGWDWYEWDNL 135
           L I K++ LTVTNN+F   P P+HYV V +RAVL DP+Q P N+EPEKC+GWDWY+W+NL
Sbjct: 63  LKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENL 122

Query: 136 PQPLFSPIKKMVMDGFNPF 155
           P+PLF P++K+   GFNPF
Sbjct: 123 PKPLFWPLEKLFGSGFNPF 141

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BLAST of Clc05G25490 vs. ExPASy Swiss-Prot
Match: Q9NV35 (Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 35  ILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQ 94
           +L+G+R  S+G   + LP GHLEFGE +EECA RE  EE  L +  + F +V N+    +
Sbjct: 29  VLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKE 88

Query: 95  PCPAHYVVVFMRA-VLTDPTQTPLNLEPEKCDGWDWYEWDNLP--QPLFSPIKKMVMDGF 154
               HYV + M+  V       P N+EPEK + W+W  W+ LP    LF  ++ +   G+
Sbjct: 89  --NYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQLFWGLRCLKEQGY 148

Query: 155 NPFPQ 157
           +PF +
Sbjct: 149 DPFKE 151

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BLAST of Clc05G25490 vs. ExPASy Swiss-Prot
Match: Q8BG93 (Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 21  PQVAVAICLL---RGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETGLD 80
           P V V + +L     + +L+G+R  S G   + LP GHLEFGE +EECA RE  EE GL 
Sbjct: 11  PGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGLH 70

Query: 81  IHKIEFLTVTNNLFMNQPCPAHYVVVFMRA-VLTDPTQTPLNLEPEKCDGWDWYEWDNLP 140
           +  + F +V N+    +    HYV + M+  V       P N+EPEK + W+W  W+  P
Sbjct: 71  LKNVCFASVVNSFVEKE--NYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFP 130

Query: 141 --QPLFSPIKKMVMDGFNPFPQ 157
               LF  ++ +   G++PF +
Sbjct: 131 PLDQLFWALRCLKEQGYDPFKE 150

[Close]

BLAST of Clc05G25490 vs. ExPASy Swiss-Prot
Match: C5BHE7 (NAD-capped RNA hydrolase NudC OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=nudC PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 21  PQVA--VAICLLRGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETGLDI 80
           PQ+A  + + + R   IL+ R      N  Y++ +G +E GE  E+ AAREI EE+ L +
Sbjct: 125 PQIAPCIIVAIRRDDHILLARH-NRHRNGIYTVLAGFVEVGETLEQAAAREIFEESRLQV 184

Query: 81  HKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPLNLEPEKCDGWDWYEWDNLPQ- 140
             + ++T       +QP P  + +  M A L D     L  +P++    DWY +D LPQ 
Sbjct: 185 KNLRYVT-------SQPWPFPHSL--MMAFLADYAAGDLCHDPKELQEADWYRYDRLPQL 244

Query: 141 -PLFSPIKKMVMD 150
            P+ +  ++++ D
Sbjct: 245 PPVGTVARRLIED 247

[Close]

BLAST of Clc05G25490 vs. ExPASy TrEMBL
Match: A0A5D3CCL5 (Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00600 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL------DHTAA-PSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPS 60
           MVSAAEQ N   L      DH AA PSPQVAVAICLLR K ILMGRRLVSIGNSKYSLPS
Sbjct: 1   MVSAAEQINSPTLAKANEDDHVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLPS 60

Query: 61  GHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPT 120
           GHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDPT
Sbjct: 61  GHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPT 120

Query: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ 157
           QTPLNLEPEKCDGWDWYEWDNLPQPLF PIKKMVMDGFNPFPQ
Sbjct: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFPQ 163

[Close]

BLAST of Clc05G25490 vs. ExPASy TrEMBL
Match: A0A1S3BFY2 (nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103489236 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL------DHTAA-PSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPS 60
           MVSAAEQ N   L      DH AA PSPQVAVAICLLR K ILMGRRLVSIGNSKYSLPS
Sbjct: 48  MVSAAEQINSPTLAKANEDDHVAAPPSPQVAVAICLLRDKRILMGRRLVSIGNSKYSLPS 107

Query: 61  GHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPT 120
           GHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDPT
Sbjct: 108 GHLEFGENFEECAIREIKEETGLDIGKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDPT 167

Query: 121 QTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFPQ 157
           QTPLNLEPEKCDGWDWYEWDNLPQPLF PIKKMVMDGFNPFPQ
Sbjct: 168 QTPLNLEPEKCDGWDWYEWDNLPQPLFGPIKKMVMDGFNPFPQ 210

[Close]

BLAST of Clc05G25490 vs. ExPASy TrEMBL
Match: A0A0A0KR28 (Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608210 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.6e-71
Identity = 133/163 (81.60%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MVSAAEQSNGSKL--------DHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLP 60
           MVSAA+Q+N  KL         H A+PSPQVAVAICLL+ K ILMGRRLVSIGNSKYSLP
Sbjct: 1   MVSAAQQNNSPKLVKANEDDDHHMASPSPQVAVAICLLKDKRILMGRRLVSIGNSKYSLP 60

Query: 61  SGHLEFGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDP 120
           SGHLEFGE FEECA REIKEETGLDI KIEFL VTNNLFM+QP PAHYVVVF+RAVLTDP
Sbjct: 61  SGHLEFGENFEECAIREIKEETGLDIEKIEFLKVTNNLFMDQPKPAHYVVVFVRAVLTDP 120

Query: 121 TQTPLNLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFP 156
           TQTP+NLEPEKCDGWDWYEWD LP PLF PIKKMV DGFNPFP
Sbjct: 121 TQTPINLEPEKCDGWDWYEWDKLPHPLFGPIKKMVTDGFNPFP 163

[Close]

BLAST of Clc05G25490 vs. ExPASy TrEMBL
Match: A0A6J1HTH5 (geranyl diphosphate phosphohydrolase-like OS=Cucurbita maxima OX=3661 GN=LOC111467679 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.9e-66
Identity = 124/158 (78.48%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MVSAAEQSNGSK---LDHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLE 60
           M+S  +Q NG+K   L     PSPQVAVAICLLRGK +LMGRRLVSIGNSKYSLPSGHLE
Sbjct: 1   MMSEVQQINGTKTKTLVVAPPPSPQVAVAICLLRGKSVLMGRRLVSIGNSKYSLPSGHLE 60

Query: 61  FGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPL 120
           FGE FEECAARE+KEETGLDI K+EFL VTNNLF++QP PAHYVVVF+RAVL  P QTPL
Sbjct: 61  FGETFEECAAREMKEETGLDIEKVEFLKVTNNLFLDQPTPAHYVVVFVRAVLAVPMQTPL 120

Query: 121 NLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPFP 156
           NLEP+KC GWDWYEWD+LPQPLF PIK MVM+GFNPFP
Sbjct: 121 NLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPFP 158

[Close]

BLAST of Clc05G25490 vs. ExPASy TrEMBL
Match: A0A6J1G1K2 (geranyl diphosphate phosphohydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC111449830 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.3e-66
Identity = 124/157 (78.98%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MVSAAEQSNGSK---LDHTAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLE 60
           M S  +Q NG+K   L     PSPQVAVAICLLR K +LMGRRLVSIGNSKYSLPSGHLE
Sbjct: 1   MGSEVQQINGTKTKTLVVAPPPSPQVAVAICLLRDKSVLMGRRLVSIGNSKYSLPSGHLE 60

Query: 61  FGEKFEECAAREIKEETGLDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPL 120
           FGE FEECAARE+KEETGLDI K+EFL VTNNLFM+QP PAHYVVVF+RAVL DP QTPL
Sbjct: 61  FGENFEECAAREMKEETGLDIEKVEFLKVTNNLFMDQPTPAHYVVVFVRAVLADPMQTPL 120

Query: 121 NLEPEKCDGWDWYEWDNLPQPLFSPIKKMVMDGFNPF 155
           NLEP+KC GWDWYEWD+LPQPLF PIK MVM+GFNPF
Sbjct: 121 NLEPDKCGGWDWYEWDSLPQPLFGPIKAMVMEGFNPF 157

[Close]

BLAST of Clc05G25490 vs. TAIR 10
Match: AT1G68760.1 (nudix hydrolase 1 )

HSP 1 Score: 198.4 bits (503), Expect = 4.4e-51
Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 16  TAAPSPQVAVAICLLRGKWILMGRRLVSIGNSKYSLPSGHLEFGEKFEECAAREIKEETG 75
           T    P+VAV + +L G  IL+GRR  SIGNS ++LP GHLEFGE FEECAARE+ EETG
Sbjct: 3   TGEAIPRVAVVVFILNGNSILLGRRRSSIGNSTFALPGGHLEFGESFEECAAREVMEETG 62

Query: 76  LDIHKIEFLTVTNNLFMNQPCPAHYVVVFMRAVLTDPTQTPLNLEPEKCDGWDWYEWDNL 135
           L I K++ LTVTNN+F   P P+HYV V +RAVL DP+Q P N+EPEKC+GWDWY+W+NL
Sbjct: 63  LKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENL 122

Query: 136 PQPLFSPIKKMVMDGFNPF 155
           P+PLF P++K+   GFNPF
Sbjct: 123 PKPLFWPLEKLFGSGFNPF 141

The following BLAST results are available for this feature:

BLAST of Clc05G25490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892917.1	5.9e-74	85.80	geranyl diphosphate phosphohydrolase [Benincasa hispida]	[more]
XP_008446534.1	6.5e-73	86.50	PREDICTED: nudix hydrolase 1-like [Cucumis melo]	[more]
KAA0034516.1	6.5e-73	86.50	nudix hydrolase 1-like [Cucumis melo var. makuwa] >TYK09070.1 nudix hydrolase 1-...	[more]
XP_004135122.1	1.8e-70	81.60	geranyl diphosphate phosphohydrolase [Cucumis sativus] >KGN52033.1 hypothetical ...	[more]
XP_023541815.1	5.3e-67	79.11	geranyl diphosphate phosphohydrolase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc05G25490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M4I1C6	5.4e-54	69.57	Geranyl diphosphate phosphohydrolase OS=Rosa hybrid cultivar OX=128735 GN=NUDIX1...	[more]
Q9CA40	6.2e-50	62.59	Nudix hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=NUDT1 PE=1 SV=1	[more]
Q9NV35	1.5e-19	37.60	Nucleotide triphosphate diphosphatase NUDT15 OS=Homo sapiens OX=9606 GN=NUDT15 P...	[more]
Q8BG93	1.5e-19	35.92	Nucleotide triphosphate diphosphatase NUDT15 OS=Mus musculus OX=10090 GN=Nudt15 ...	[more]
C5BHE7	1.2e-08	30.83	NAD-capped RNA hydrolase NudC OS=Edwardsiella ictaluri (strain 93-146) OX=634503...	[more]

BLAST of Clc05G25490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCL5	3.1e-73	86.50	Nudix hydrolase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3BFY2	3.1e-73	86.50	nudix hydrolase 1-like OS=Cucumis melo OX=3656 GN=LOC103489236 PE=3 SV=1	[more]
A0A0A0KR28	8.6e-71	81.60	Nudix hydrolase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G60...	[more]
A0A6J1HTH5	2.9e-66	78.48	geranyl diphosphate phosphohydrolase-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1G1K2	8.3e-66	78.98	geranyl diphosphate phosphohydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Clc05G25490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68760.1	4.4e-51	62.59	nudix hydrolase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 63..78 score: 48.98 coord: 49..63 score: 38.83
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 22..144 e-value: 3.7E-18 score: 65.8
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 20..152 score: 15.002676
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 14..156 e-value: 8.8E-45 score: 153.9
None	No IPR available	PANTHER	PTHR16099:SF6	NUDIX HYDROLASE DOMAIN-LIKE PROTEIN-RELATED	coord: 19..155
None	No IPR available	PANTHER	PTHR16099	8-OXO-DGTP DIPHOSPHATES NUDT15	coord: 19..155
None	No IPR available	CDD	cd04678	Nudix_Hydrolase_19	coord: 21..145 e-value: 5.78902E-56 score: 169.75
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 54..75
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 16..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G25490.1	Clc05G25490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006203	dGTP catabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0035539	8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0016787	hydrolase activity