Clc05G22170 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G22170
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	THO complex subunit 5B
Location	ClcChr05: 30505867 .. 30513208 (-)
RNA-Seq Expression	Clc05G22170
Synteny	Clc05G22170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCGTGGATTTTTCTATGATACAATGGAAATATTGATTCACTCCTCATATCAATGTAAAACTCATGAAAACATGAAAATATCGACATGATGATAGAAATTTAATACTATGATGAAAACTCATGTGTTGAACTTATGTAATTAACGAAATGTATATATGTATAAAGCTTCAAAAAATATATATAAAAAATAAAAAATAATAAAAAAAAGTAGTGAGAATAAGATAATAGAATGTGTATACAAAATATAACAGTGACATAGATATATTTTGCATTAAAACCTTAGAACTTGTTTTTTTTGTTTAAAAAAATAGAACGTTCAATGACCTCCATTGGCATCTTGAATTTTAGTTTAGTACGTTCCAAAAACATTTTTTTCACCCTCTCTCCCCCTTCCCAACATTTTTTAGCCATTTTGTTCGTGCAAAATAAATAAAAATAATAATAATTACACCCAAGGGAAGAACACACAAATCATAAAACATACGAAATCTATACCCGGATAATAATTTAGGTATGGATGATTTTCAAATATAATCTAATAAAGGTTCTTGAAATTTTATTCTTTAACTTCTATAAACCAATTTACTTATTTAAATTCAGTATATCGTACAATTTGGAGGTTCAATGAATATTTATAGGCGTAATTTTTAAAAATTAAAAATAAATGAAATAGTTATCAAAAGAGACTATATTTTAAAAACTAAGTTTTGAATGTCACTACTAATACATCTAAATTTGCAATCTCGTCAGAGAACATAAATCTTTTATACGAAATTGGTTAAATAATAATAATAATTTTCATGCAATTGAGTTTTCAATATATTTTTATTTTAATTATTTAATTTGCATTTTGGTAATGATTTTATTTTTTGTTTTTTTTTTAATTGAAATTTATGCTTGCTATCTCTTAAACGTGGTTTTCATGTGAAGAAAAAAATTGAATTTCAAGTCAAATTCTAAAAACAAAAACAAGATGTTACCGTAATTTTTAATTGTGTTTACATTATGTTAAAGGTATATAAGTGATCTTTCTTAAAAATAAATAAAAAAGTATATAAACGAAATGGTTCAACTTTAATTTTTTAAATTGACCTATTGATTTAATAACATATAAATTTTGTCACCGAAATCTTTTTTTTTCCAACAAAAGGAAATAAATTTAAAACCGACTATCATTCCCTATCATAAAAACAAATTGAAATTAGAATTTCCAATAAATTTAATCTCTTGTATCAAATAAATATAACACAACTAAGTTCATATTTAATAGATCTCTTAATTCTATAAAGTATCAAATAAATTTATAAAATTTAATTTTTGTGTTTAATAAGTTTTTTTATAATTTATCTAAAAAATATTTAATATTTTTTTACATCTATACTATCTAAAAGAGTTGCTGAGAGAAACATTTAATTTCCACTTTTACCCTTTTTAGTTGATATTTATAATTCACCTAAATTTAATTTAGTTTAAAATTAGGTTATTTCTAATATTTGATATAAAGTCCAAGAATTATCATTAAAAAAACAAAAAAAAAATTATCCTTCACTTCAAAATCAAATTCAGTTGAATTTTATTTTATTTTCTATAAATCGGTTAAACTGAACTCCCAATTAATAATTTAAAACTAATATTTCATTTTGATTATGGTTGATAATCAAGATATAAGAGTTGACCATAGTGTTGAAGATTTACCAACTATGAAGCATACGTAGAGCTAGCCTGGTGATGCTAGTTCATTCGCCCCGATGATGACGATGTCTACATTTGGTTCCGAATATTATGATTCTCAAGTTGGTCCATCATCTTCATACATTTATAGACATGGACGTGGTTATGGGGAGTATAACGAATATTTACACTAAAGCGCTTGCAGAGGAATTGAAGGAACCAAAGCAAAAGCAACTTAGATTTCAAAGTCAACGACAACAACCAACCCAAAATCGGCGACGTCCACCCTTTGGGATACAATGAGTTTAATTTTTAATTTTTAAATTTATGGAAAACATTAAATTATTGTATTGATATTGACATTTTAATTTATATTTTATTATTTCTCCACTATGAACAATAGTTTTAATGAAGTTTTATGTTCTTTGTTGGAGTTGGCTTGGATCCTTTCTTTGTAAAACCATTGGTTTGATTTAATTTTTAGTTGACCCCAAAACCGATAAAATCGAACCAACTATTACCCCTATCTTATTATTAATAAAATACATTTTTTTATTATTAAAAAATAGAATTGTTAATTTTTAATAAAGTACGTTTTTTCTTTGAAAAAAGAAAGAAAAAGATTATGTTATAAAAAATGATGTTTCTTTTTTTACAAATAGAAAAAAAAAGATGTTCTCAAACATAATAAAATTAACCAAAATATTTACAAATATAACAAAATTTTATTGTATATTTGATATAGACTATTTTATGTGTCTTTGATTTTGACACAAATAGTAGTCTATTGCTGTCTATTGCGGATATACTATCATATTTTACTATTATGCATGAATATTAAAAAATGGAAAAGGATTATGTTATTAAAAGAAAAAAAAGAGATCAGTCAAGTGTTGATCACTCGCTAAAAAATCATTCCCATTACATAAATAAGTTTTCGACCGATCGTATATTTAAAACTACAATATTTTTAAAAATAAATTCAAACTATAATATTTGTCTAAATATTTTCTAAATTTACAATTTTTCTACAATATATCCCCGGAAGTTGGGGCCAACCACCGTGGGAGTTGGAAATTTCAACTCTGTAAAACTATGATTTTATTTCGTTATATGTATATTTCCCTCTCCCTTCATTTTCTTGTCAGATTTATTATTATTATTATTATTATTTTTCATTTTTTTGAGTACAACGTTTAAGAGATATTAAACTTTTCTTTAACTTTGACTCTTTAGAACTCAAACTAATTTTCGTATAAATCAAAGCATAATTATATATATTTTTAATTTGATTCTTTTAATTTTAAACCCAAATTTTTCTTCAAAATAAATTGTAATTTTGGTAAAAACAAAATATAATCGACCGGCCGGAAGCCGATCGTCCCGTCGTGCCATTCCTTACTAGGTCGATAACTGCGCCGTTTTCTTATTGTGTCGCTACAAATTTGGCTTCAGCCTCCATCGAAGCTTGGACCAGAGCATAGCGGGTGACTGAATCAGGCGGGCAACAATCTACAGAGATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAGCCCGAGCCCCTGCCGTCAGACAGCGATACTGGCAAAATGTCTCCCTACGAAATGCTCCGAGAAAGCAAAAGTTCTGTGGAGGAGATCGTCACCAAGATGCTCTCCATCAAGAAACATGGCGAGCCTAAAACTCAGCTCAGAGAACTCGTTACCCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGTTCTTGTTTCTATACGCTCTCTCTTTTAGGGTTTTAGGCTATTTCCGAGATTCATTGGTTCGAAATGGCAATTTTTATTTTATTTTGCCTTGCTAATTTGCCATGCGGCACGATGAACTTCAATTGTGCCATAGTAGATTTCAATTTCAAATTGCACCCATTCATGACTCTCCTGGGATAATGTTTGCTACAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAAGCCTGCAAAGACTTCAAATCGAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAATTTTTCCGGGATGCACCCCAAGACATTAAGAACTCTACAAGGTCAAAGGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGGTGACCTTGAATTGTTGTTTATTATTGTCTCTTTGAATTAATTCACGGGTGCAGAATGTTTCTGGTAACTGGAGATACTAATAACTTGGTTAGGACGGATGAAAGCAATAGCTCCATGTTATATACAAAAATTTGAGGATGCATCACCTTCCTTTTGGTCGATTATGTGGTTCTAAGAAAAATATATTTTGGCCACTCCATAGGCTAAACTACTATTTTAAAAAATTATGGACAATCTAACTTGCTTGTATGCCCTTGACTACTTCTAAAAGACATCCTAAACATTAGATTTTGAATTATGACTGCAAACTTACGTCATACCTAAGCTTAAATCTTTCCCTCTTCAGAATGGGTGCATGTATGATGTTTTCCATGTTTTTGGTTTTTATTTGAAAGTTCCAGTTTTCCACCTTTATCGATGTGGATGTACATTGTCGATTTTTCCTTTTTAGTGAAAATGTTTTTTTTTCATTGTTGCTATTGAGTCTATTGATATATCCATCATTTTATCAGCGCAAAGAACTTTGCAAACGTCGAGATGAACTTGAACAGCATAAGAAAAGCCTACTAGAAGTCATTGCTAATAGAAAGAAATTCTTGTCAAGTCTTCCCTCACATCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAATTAGCAGAGCTACTTCCACCTCCTCTCTATGTAATCTACTCGCAATTCTTGGCACAGAAGGAAGCATTTGGCGAAAACATTGAATTGGAGATAGTAGGAAGTGTGAAAGATGCCCAAGCTTTTGCACGCCATCAAGCAAATAAGGAAACTGGTACCTGGGTGTTTATTTTCTGTCAGACCTTTAGTTGAATAGTTATATCTAACGTCACATATGATAAGTTTTGTATTGTCAGAATTGTTTTAATTTTATATAGTTCAATTGGATACATATGCTACTAAATAACTTCTTTTTGAATCATCTTGTCATGTAATGTATAGCCTATACGTACAAATTGAATTGATTATTCATTGAAATCATCGCATGAATCTAAATTGCAGATCATATTTACTTTTTTAGAAACATCAATTTTGAGATAACTGGATTTCCACAGAATTTCCACAGATAACTCTTTCTTCATGTTTTTTTAAGAGAATAATATTGCCATTGCAAATATTCTAGGTGCATCAACCAATGCTGAGAGCAACAAGTTGGAGGATGATGCCCCTGATGAAGATGATGATGGACAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCCCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAATGAAATTACTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACGTTATTTGTGTTGGGATTGAAGGATCTCATGAAGGTCCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGATACTGGCCTTGAGCTGCCTCACCAGGTATGAATTCAGAAATTTCCATTTATGTTTGGATTGTTCTGCACCCTGCCCCACTCCAACTTACATTTTCAAGGAAAAAAAAGGTGAAATCCTTGATCGTATATTATTTTGTTTTAAATGTTGCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGATAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGGATTGATTTTTTGCCAGAATTGCCACCGTTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAGAACCGAATACAGACAGTTGTGCAAAGATTACGCTCTCGGAAGAAGGCTCAGCTGGCTCTTGTGTGAGTCATTGATTTGTATTCAAAGCTTTAGATTATGAATGACTTTGAAGAATGAATGATAGAAGATGGATTTGTAGCTTAGAGATCAATTGACCTTCTGCTGTCATTGTTGCTTTGATCACTTGCAATTTCATGCATTATGCTTCTGTGACTGACACTGTATTTTCTCAAGAAAACTATATTTTCCATGTTTACTTATACTTCTGCTGCATTTTGTACAATGGAATTCTTTTCGGTTGGTGGAAGGATCACTAGTTCAGCCAAGTATGGTTTGTGGTTTGTAGTTTGTGTTGAGAAATTGGGATTTTTGTATTGACTAACAGGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCTGTTCTGACATGCGATGATGTCCCATGGGTTTCGCATAAACCTTCATGCTGTTTGCAAGGTTGGTCGCTCATAGGTTACTCTACAAGGCAGGCATCATCTTTGACTACAATAGAGAAAGAGAAAGTTCAGGATCCTGTAGATGTTGATATGGTTGGAAAATCTGGTATTTCAAGAGAAGAGACTGACAGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAAATAATGCTCAAGTTACTCCCTTAAGAACACCCAATCTTGAGCATTCCAAGCAGTTGACTCTAATTTCCAAGAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAATAAACATGATGAAGATTATGAGTTGATGCTAGATCTTGACAGCGATCAGGATGAGCCAGTGCAAACTGAGGTTGCAGCAGATGATGTAGTGTCTATTCCTTCCAACGACATAACACGAAAGACATGGGTGGATTACGGGTCCAAGGAATATTGCCTTGTTATTACCAGAAACACTGAGCCACCTGCCCAAAATCTTAAATTGCAAGCCAAGGTAACAATTTATTTTTTTTTTTCTTATCAAAATTCTATTTTATTGATTTCCTGATTCTTGACATCAATAATGTTACGGCAGGTTAAAATCAGCATGGAGTACCCTCTGAGGCCTCCTGTCTTCACCTTGAATCTTTACACAATGAATTCTGAAGAAAACCGTGATGAGAGTGACGACTCTAATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTAAGGAGGAAAGTTTGTTTTAATCTCCGACCTCTTCAGAGCTTGAGTACTGGTTGTTGACTTGGTAATTTTTCACTTAATAGATCTGCGTCCTTGGTTTTGTAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAAGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGCTATGTTGTTTAACTACTGCATTGGCGAGGCATCCCTATCCTCTGAAAGAAGAAAGAGTAGTTCTGTCATTGATGTTGGATTGTGCAAACCTGTTAGTGGTAGTTTACATGCCAGATCATTTAGAGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGATATTGAATGCACCCCTGGCTATCCTTGCTAA

mRNA sequence

ATGTTTCGCGGGCAACAATCTACAGAGATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAGCCCGAGCCCCTGCCGTCAGACAGCGATACTGGCAAAATGTCTCCCTACGAAATGCTCCGAGAAAGCAAAAGTTCTGTGGAGGAGATCGTCACCAAGATGCTCTCCATCAAGAAACATGGCGAGCCTAAAACTCAGCTCAGAGAACTCGTTACCCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAAGCCTGCAAAGACTTCAAATCGAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAATTTTTCCGGGATGCACCCCAAGACATTAAGAACTCTACAAGGTCAAAGGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGATTTTGAATTATGACTGCAAACTTACGTCATACCTAAGCTTAAATCTTTCCCTCTTCAGAATGGGTGCATGTATGATGTTTTCCATGTTTTTGTTTTCCACCTTTATCGATGTGGATGTACATTGTCGATTTTTCCTTTTTAGTGAAAATGTTTTTTTTTCATTGTTGCTATTGAGTCTATTGATATATCCATCATTTTATCAGCGCAAAGAACTTTGCAAACGTCGAGATGAACTTGAACAGCATAAGAAAAGCCTACTAGAAGTCATTGCTAATAGAAAGAAATTCTTGTCAAGTCTTCCCTCACATCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAATTAGCAGAGCTACTTCCACCTCCTCTCTATGTAATCTACTCGCAATTCTTGGCACAGAAGGAAGCATTTGGCGAAAACATTGAATTGGAGATAGTAGGAAGTGTGAAAGATGCCCAAGCTTTTGCACGCCATCAAGCAAATAAGGAAACTGAGAATAATATTGCCATTGCAAATATTCTAGGTGCATCAACCAATGCTGAGAGCAACAAGTTGGAGGATGATGCCCCTGATGAAGATGATGATGGACAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCCCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAATGAAATTACTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACGTTATTTGTGTTGGGATTGAAGGATCTCATGAAGGTCCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGATACTGGCCTTGAGCTGCCTCACCAGATTGTTCTGCACCCTGCCCCACTCCAACTTACATTTTCAAGGAAAAAAAAGGTGAAATCCTTGATCTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGATAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGGATTGATTTTTTGCCAGAATTGCCACCGTTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAGAACCGAATACAGACAGTTGTGCAAAGATTACGCTCTCGGAAGAAGGCTCAGCTGGCTCTTGTGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCTGTTCTGACATGCGATGATGTCCCATGGGTTTCGCATAAACCTTCATGCTGTTTGCAAGGTTGGTCGCTCATAGGTTACTCTACAAGGCAGGCATCATCTTTGACTACAATAGAGAAAGAGAAAGTTCAGGATCCTGTAGATGTTGATATGGTTGGAAAATCTGGTATTTCAAGAGAAGAGACTGACAGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAAATAATGCTCAAGTTACTCCCTTAAGAACACCCAATCTTGAGCATTCCAAGCAGTTGACTCTAATTTCCAAGAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAATAAACATGATGAAGATTATGAGTTGATGCTAGATCTTGACAGCGATCAGGATGAGCCAGTGCAAACTGAGGTTGCAGCAGATGATGTAGTGTCTATTCCTTCCAACGACATAACACGAAAGACATGGGTGGATTACGGGTCCAAGGAATATTGCCTTGTTATTACCAGAAACACTGAGCCACCTGCCCAAAATCTTAAATTGCAAGCCAAGGTTAAAATCAGCATGGAGTACCCTCTGAGGCCTCCTGTCTTCACCTTGAATCTTTACACAATGAATTCTGAAGAAAACCGTGATGAGAGTGACGACTCTAATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAAGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGCTATGTTGTTTAACTACTGCATTGGCGAGGCATCCCTATCCTCTGAAAGAAGAAAGAGTAGTTCTGTCATTGATGTTGGATTGTGCAAACCTGTTAGTGGTAGTTTACATGCCAGATCATTTAGAGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGATATTGAATGCACCCCTGGCTATCCTTGCTAA

Coding sequence (CDS)

ATGTTTCGCGGGCAACAATCTACAGAGATGGACGAGGAGATAGAGGAGGGAATGCTCATAGAAGACGAGCCCGAGCCCCTGCCGTCAGACAGCGATACTGGCAAAATGTCTCCCTACGAAATGCTCCGAGAAAGCAAAAGTTCTGTGGAGGAGATCGTCACCAAGATGCTCTCCATCAAGAAACATGGCGAGCCTAAAACTCAGCTCAGAGAACTCGTTACCCAGATGTTCCTTCACTTCGTAACCCTTCGCCAGGCCAACCGCTCTATTTTGCTGGAAGAGGACCGAGTGAAAGCTGAAACAGAGCGAGCAAAAGCTCCAGTTGACTTCACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTATGTTAAAGCAATAAAAGCCTGCAAAGACTTCAAATCGAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAATTTTTCCGGGATGCACCCCAAGACATTAAGAACTCTACAAGGTCAAAGGACAGCGCGCACAATCTGATGCTGCAGAGGCTTGACTATGAGCTTTTCCAGATTTTGAATTATGACTGCAAACTTACGTCATACCTAAGCTTAAATCTTTCCCTCTTCAGAATGGGTGCATGTATGATGTTTTCCATGTTTTTGTTTTCCACCTTTATCGATGTGGATGTACATTGTCGATTTTTCCTTTTTAGTGAAAATGTTTTTTTTTCATTGTTGCTATTGAGTCTATTGATATATCCATCATTTTATCAGCGCAAAGAACTTTGCAAACGTCGAGATGAACTTGAACAGCATAAGAAAAGCCTACTAGAAGTCATTGCTAATAGAAAGAAATTCTTGTCAAGTCTTCCCTCACATCTCAAGTCCTTGAAAAAGGCATCCTTGCCCGTACAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAATTAGCAGAGCTACTTCCACCTCCTCTCTATGTAATCTACTCGCAATTCTTGGCACAGAAGGAAGCATTTGGCGAAAACATTGAATTGGAGATAGTAGGAAGTGTGAAAGATGCCCAAGCTTTTGCACGCCATCAAGCAAATAAGGAAACTGAGAATAATATTGCCATTGCAAATATTCTAGGTGCATCAACCAATGCTGAGAGCAACAAGTTGGAGGATGATGCCCCTGATGAAGATGATGATGGACAAAGGAGGAGAAAACGGCCAAAGAAGATTCCAGCTAAGGTGAACATTGAGCATGCAGGGATATATCAAGTTCATCCCCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAATGAAATTACTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACGTTATTTGTGTTGGGATTGAAGGATCTCATGAAGGTCCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGATACTGGCCTTGAGCTGCCTCACCAGATTGTTCTGCACCCTGCCCCACTCCAACTTACATTTTCAAGGAAAAAAAAGGTGAAATCCTTGATCTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTGATAAGAGAACCTCTCGACCATATAAGTGGGCCCAACATTTGGCTGGGATTGATTTTTTGCCAGAATTGCCACCGTTGGTGAGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCAGGCCTCTCAATGTATCGTCAGCAGAACCGAATACAGACAGTTGTGCAAAGATTACGCTCTCGGAAGAAGGCTCAGCTGGCTCTTGTGGAACAGCTTGATTCACTTGAAAAACTCAAATGGCCTGTTCTGACATGCGATGATGTCCCATGGGTTTCGCATAAACCTTCATGCTGTTTGCAAGGTTGGTCGCTCATAGGTTACTCTACAAGGCAGGCATCATCTTTGACTACAATAGAGAAAGAGAAAGTTCAGGATCCTGTAGATGTTGATATGGTTGGAAAATCTGGTATTTCAAGAGAAGAGACTGACAGTGCTAGGGAAGATGGGGAACTTCCTGCTCTAGTTTCATCTACATCTATCTTAAATAATGCTCAAGTTACTCCCTTAAGAACACCCAATCTTGAGCATTCCAAGCAGTTGACTCTAATTTCCAAGAGCATTACACCTCAAACCAATTACTCTAGGATGCTAAGTTTCAATAAACATGATGAAGATTATGAGTTGATGCTAGATCTTGACAGCGATCAGGATGAGCCAGTGCAAACTGAGGTTGCAGCAGATGATGTAGTGTCTATTCCTTCCAACGACATAACACGAAAGACATGGGTGGATTACGGGTCCAAGGAATATTGCCTTGTTATTACCAGAAACACTGAGCCACCTGCCCAAAATCTTAAATTGCAAGCCAAGGTTAAAATCAGCATGGAGTACCCTCTGAGGCCTCCTGTCTTCACCTTGAATCTTTACACAATGAATTCTGAAGAAAACCGTGATGAGAGTGACGACTCTAATTGGTATAATGAACTTCGGGCCATGGAAGCTGAGGTGAATCTCCATATACTTAAGATGCTGCCTTTGGATCAAGAGAACTATATATTGTCTCATCAAATTTGTTGTCTTGCTATGTTGTTTAACTACTGCATTGGCGAGGCATCCCTATCCTCTGAAAGAAGAAAGAGTAGTTCTGTCATTGATGTTGGATTGTGCAAACCTGTTAGTGGTAGTTTACATGCCAGATCATTTAGAGGAAGGGATCGTAGGAAGATGATATCCTGGAAAGATATTGAATGCACCCCTGGCTATCCTTGCTAA

Protein sequence

MFRGQQSTEMDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLHPAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTCDDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSAREDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDEDYELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNLKLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLPLDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC

Homology

[Close]

BLAST of Clc05G22170 vs. NCBI nr
Match: XP_008452557.1 (PREDICTED: THO complex subunit 5B [Cucumis melo] >KAA0064387.1 THO complex subunit 5B [Cucumis melo var. makuwa])

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 771/918 (83.99%), Postives = 798/918 (86.93%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE  PLP DS+TGK+SP+EMLRESKS VE+IVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP++IKNSTRSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              G+S NAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GSSNNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NE CEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NEICEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPWVSHKPSCCLQGWSL+GYST+QASSLTT+EKEKVQDPVDVDMVGKSGISREE DSA
Sbjct: 601 DEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDSA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSST ILNN +VT LRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED
Sbjct: 661 REDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELM+D+DSD+D+PVQ E+AADDV S+PSNDITRK W+DYGSKEYCL++TRNTE PA+NL
Sbjct: 721 YELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDYGSKEYCLILTRNTEQPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEEN +ESDDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDWYNELRAMEAEVNLHILKMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQI CLAMLFNYCI EASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 818

[Close]

BLAST of Clc05G22170 vs. NCBI nr
Match: XP_038897136.1 (THO complex subunit 5B [Benincasa hispida])

HSP 1 Score: 1474.1 bits (3815), Expect = 0.0e+00
Identity = 777/918 (84.64%), Postives = 795/918 (86.60%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE +P P D DTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETDPPPPDGDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP+DIKNSTRSKDSAHNLMLQRLDYE+F        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSTRSKDSAHNLMLQRLDYEVF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GASTN ESNKLEDDA DEDDDGQRRRKRPKKIPAKV+IEHAGIYQVHPLKIILHIY 
Sbjct: 361 ---GASTNTESNKLEDDALDEDDDGQRRRKRPKKIPAKVDIEHAGIYQVHPLKIILHIYG 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NETCEPKSMKLLSLKFE LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NETCEPKSMKLLSLKFEWLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGET+AFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETIAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QESA GETVR+DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESAGGETVRNDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           DDVPWV HKP CCLQ WSL+GYSTRQASSLTT+EKEKVQDPVDVDMVGKSGISREE D A
Sbjct: 601 DDVPWVLHKPLCCLQDWSLVGYSTRQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDGA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSSTSILNNAQVTPL+T NLEHSKQLTLISKSITPQTNYSR+LSFNKHDED
Sbjct: 661 REDGELPALVSSTSILNNAQVTPLKTSNLEHSKQLTLISKSITPQTNYSRVLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELMLD+DSDQDEPVQTE+AADD+ S+PSNDIT KTW+DYGSKEYCLVITRNTEPPA+NL
Sbjct: 721 YELMLDVDSDQDEPVQTELAADDLASVPSNDITTKTWMDYGSKEYCLVITRNTEPPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEEN   S DS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEEN---SPDSDWYNELRAMEAEVNLHILKMLP 815

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCLAMLFNYCIGE SL SERRKSSSVIDVGLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQICCLAMLFNYCIGEESLFSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 815

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 815

[Close]

BLAST of Clc05G22170 vs. NCBI nr
Match: XP_004141378.1 (THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_012617 [Cucumis sativus])

HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 765/918 (83.33%), Postives = 793/918 (86.38%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EPLP DS+TGK+SP+EMLRESKS VE+IVTKMLSIKKHGE KTQL
Sbjct: 1   MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP++IKNS RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKK LLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GAS NAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASNNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           +ETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 SETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPWVSHKPSCCLQGWSL+GYST+QASSLTT+EKEKVQDPVDVDMVGKSGISREE DSA
Sbjct: 601 DEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDSA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSST ILNN +V   RTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED
Sbjct: 661 REDGELPALVSSTPILNNPEV---RTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELM+D+DSDQD+PVQ E+AADDV S+PSN+IT K W+DYGSKEYCL++TRNTE P +NL
Sbjct: 721 YELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDYGSKEYCLILTRNTERPTKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEENR+E DDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEENREECDDSDWYNELRAMEAEVNLHILKMLP 815

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCLAMLFNYCI EASL SERRKSSSVID+GLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQICCLAMLFNYCISEASLFSERRKSSSVIDIGLCKPVSGSLHARSFRGRD 815

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 815

[Close]

BLAST of Clc05G22170 vs. NCBI nr
Match: XP_022982205.1 (THO complex subunit 5B [Cucurbita maxima])

HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 761/918 (82.90%), Postives = 792/918 (86.27%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EP P +S+TGK+SPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP+DIKNS RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANK+        
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDA------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GASTN ES+KLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NETCEPKSMKLLSLKFECL KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVV ETL+FSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPW SHKPSC LQGWSL+GY+T Q SSL  +EKEKV+DP+DVDM+GKSGISRE+ D A
Sbjct: 601 DNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRDPLDVDMLGKSGISREDIDGA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSSTSIL+NAQ TPLRTPNLEHSKQLTLISKSITPQTNYSRMLSF+KHDED
Sbjct: 661 REDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFSKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELMLD+DSDQDEP+QTE+AADDV SIPSNDITRKTW+DYGSKEYCLV+TRNT+ PA+NL
Sbjct: 721 YELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPP FTLNLYT+NSEENRDESDDS+WYNELRAMEAEVNLHIL MLP
Sbjct: 781 KLQAKIKISMEYPLRPPFFTLNLYTINSEENRDESDDSDWYNELRAMEAEVNLHILNMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCL MLFNYCI EAS SSER+KSS VIDVGLCKPVSGS+HARSFRGRD
Sbjct: 841 LDQENYILSHQICCLEMLFNYCINEASRSSERKKSSFVIDVGLCKPVSGSIHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIEC PGYPC
Sbjct: 901 RRKMISWKDIECAPGYPC 818

[Close]

BLAST of Clc05G22170 vs. NCBI nr
Match: KAG7037799.1 (THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 761/918 (82.90%), Postives = 793/918 (86.38%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EP P +S+TGK+SPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEF RDAP+DIKNS RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANK+        
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDA------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GASTN ES+KLEDDAPDEDDDGQRRRKRPKKIPA+VNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NETCEPKSMKLLSLKFECL KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVV ETL+FSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPW SHKPSC LQGWSL+GY+T Q SSLT +EKEKV+DP+DVDM+GKSGISRE+ D A
Sbjct: 601 DNVPWASHKPSCSLQGWSLVGYATSQESSLTIMEKEKVRDPLDVDMLGKSGISREDIDGA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSSTSIL+NAQ TPLRTPNLEHSKQLTLISKSITPQTNYSRMLSF+KHDED
Sbjct: 661 REDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFSKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELMLD+DSDQDEP+QTE+AADDV SIPSNDITRKTW+DYGSKEYCLV+TRNT+ PA+NL
Sbjct: 721 YELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLR P FTLNLYT+NSEENRDESDDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDWYNELRAMEAEVNLHILKMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCL MLFNYCI EAS SSER+KSSSVIDVGLCKPVSGS+HARSFRGRD
Sbjct: 841 LDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVIDVGLCKPVSGSIHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIEC PGYPC
Sbjct: 901 RRKMISWKDIECAPGYPC 818

[Close]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot
Match: F4K4J0 (THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 1.1e-255
Identity = 495/927 (53.40%), Postives = 632/927 (68.18%), Query Frame = 0


Query: 11  DEEIEEGMLIEDE-PEPLPSDSDT-------GKMSPYEMLRESKSSVEEIVTKMLSIKKH 70
           D EIEEGM+  DE P P  +  +T       GK SP E+LRESK+SVEEIV KMLS+KK 
Sbjct: 3   DGEIEEGMVTADEFPTPEVTTIETIQPPREPGK-SPLELLRESKTSVEEIVAKMLSMKKQ 62

Query: 71  GEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEK 130
           G  K+++REL+TQMFL+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMYEK
Sbjct: 63  GNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEK 122

Query: 131 SHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQ 190
           SHYVKAIKAC+DFKSKYPDI+LV E +FFR AP+ IK+ + S DS+H LM +RL++EL  
Sbjct: 123 SHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFEL-- 182

Query: 191 ILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSL 250
                                                                       
Sbjct: 183 ------------------------------------------------------------ 242

Query: 251 LIYPSFYQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGI 310
                 +QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN LGI
Sbjct: 243 ------HQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGI 302

Query: 311 LQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKET 370
             TKKLKQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+ K++
Sbjct: 303 QHTKKLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDS 362

Query: 371 ENNIAIANILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLK 430
                     G S+N ES++LEDD PD+DDDGQRRRKRPKK+ +K   + AG+YQVHPLK
Sbjct: 363 ----------GMSSNTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLK 422

Query: 431 IILHIYDNETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLEL 490
           I+LHIYD+E  + KS+KL+ LKFE LLKLNV+CVG EGS +GPE NI CNLFPDD GLE 
Sbjct: 423 IVLHIYDDEIPDTKSLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEP 482

Query: 491 PHQIVLHPAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPE 550
           PHQ                      S KL++G+   F + RTSRPYKW QHLAGID    
Sbjct: 483 PHQ----------------------STKLILGDGQTFDENRTSRPYKWVQHLAGID---- 542

Query: 551 LPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEK 610
           + P++  QE+ + +  +SD  V  LS+YRQQ+R+QTV++R+R RKKA LAL EQLD L K
Sbjct: 543 ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKKAHLALAEQLDLLMK 602

Query: 611 LKWPVLTCDDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGI 670
            + PV+ C+D PW  HK  C L  W  I  S  ++ SLT    E+V +P+++D+ G+S  
Sbjct: 603 HELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQVPEPMEIDVDGRSIS 662

Query: 671 SREETDSAREDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRML 730
            +E+ +S REDGELP+LV++ + L ++  TP +  N   S+QL L++K++    +  +  
Sbjct: 663 GKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQARSRQLALMTKNLDSPISKGKSP 722

Query: 731 SFNKHDEDYELMLDLDSDQDEPV-QTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITR 790
           SF K+++D +L+LD DS+ DEP  +TE   +++    +++    +WVDYGS+E+ LV +R
Sbjct: 723 SFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKADN----SWVDYGSREFALVFSR 782

Query: 791 NTEPPAQNLKLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEV 850
            T+   +  KL+A V+ISMEYPLRPP+F+L+L+  +S  N + +++S+ YNELRAMEAEV
Sbjct: 783 KTD-GGKLWKLEAMVQISMEYPLRPPLFSLSLHASSSSGNENGTNESDHYNELRAMEAEV 819

Query: 851 NLHILKMLPLDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSL 910
           NLH+LK++P DQENY+LSHQI CLAMLF+Y + + S  S+R  +++V+DVGLCKPV G L
Sbjct: 843 NLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPDSKRGTATTVVDVGLCKPVDGKL 819

Query: 911 HARSFRGRDRRKMISWKDIECTPGYPC 928
             RSFRGRD RKMISWK   C  GYPC
Sbjct: 903 LVRSFRGRDHRKMISWKGRGCASGYPC 819

[Close]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot
Match: F4HRC1 (THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.3e-134
Identity = 280/561 (49.91%), Postives = 353/561 (62.92%), Query Frame = 0


Query: 33  TGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILL 92
           T + SP E+L+++K+SVE I+ KMLSIK+ G PK++ REL+TQMFL+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 93  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFR 152
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+YP+I+L+SE +FF 
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 153 DAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMF 212
           DAP+ IK+ T S DS+H+LML+RL++EL                                
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFEL-------------------------------- 191

Query: 213 LFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVI 272
                                               +QRKELCK R  LEQ KKSLLE  
Sbjct: 192 ------------------------------------HQRKELCKLRVRLEQQKKSLLESN 251

Query: 273 ANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQK 332
           A R KFLSSLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A K
Sbjct: 252 AERNKFLSSLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALK 311

Query: 333 EAFGENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDD 392
           EAF ENI++E+ GS+KDAQ +AR QA +                N+ES +LE        
Sbjct: 312 EAFEENIDVEVSGSLKDAQTYARQQAEQ----------------NSESLRLEVGV----- 371

Query: 393 DGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLLKLN 452
           D +R+RKR K    KV  +  G+YQVHPLK++LH+YD+E  +PKS +L+ LKFE LLKLN
Sbjct: 372 DEERQRKRLK----KVGSDEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLN 431

Query: 453 VICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLHPAPLQLTFSRKKKVKSLISAKLV 512
           V+CVGIE S +G E NILCNLFPDD+GLE PHQ                      SAKL+
Sbjct: 432 VVCVGIEESEDGLEKNILCNLFPDDSGLEPPHQ----------------------SAKLI 452

Query: 513 VGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQ 572
           +G    F   RTSRPYKWAQHLAGI+ LPE+ P  + +     +   SD   G +     
Sbjct: 492 LGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-----DIQYSDTAKGYASASDH 452

Query: 573 NRIQTVVQRLRSRKKAQLALV 594
             +QTV+QR+RS+KK +L LV
Sbjct: 552 RNVQTVLQRIRSQKKTKLTLV 452

[Close]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot
Match: Q5ZJK1 (THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-31
Identity = 150/596 (25.17%), Postives = 251/596 (42.11%), Query Frame = 0


Query: 39  YEMLRESKSSVEEIVTKMLSIKKHG--EPKTQLRELVTQMFLHFVTLRQANRSILLEEDR 98
           YE+ +E+   ++ ++ ++  +K  G  +  +++ E   Q  +HF+TL++ NR   +   +
Sbjct: 51  YELYKETCQELQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKK 110

Query: 99  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQ 158
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ +IELVS +EF+ +AP 
Sbjct: 111 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPT 170

Query: 159 DIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFST 218
           +I     +    H   L RLD+EL                                    
Sbjct: 171 EISRPDITLTEPHQQTLARLDWEL------------------------------------ 230

Query: 219 FIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVIANRK 278
                                            QRK L +R  E +  K+ +L+ I  +K
Sbjct: 231 --------------------------------EQRKRLAERYKECQTIKEKILKEIEVKK 290

Query: 279 KFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFG 338
           ++LSSL   L S+ +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A  
Sbjct: 291 EYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACD 350

Query: 339 ENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDDDGQR 398
           + + + I GSV++A+A  +   + +                      +D++  + ++ Q 
Sbjct: 351 KKLVVAIEGSVEEAKALYKPPEDSQ----------------------DDESDSDMEEEQT 410

Query: 399 RRKRPKKIPAKVNIEHAGIYQVHPLKI----------ILHIYDNETCEPKSMKLLSLKFE 458
            ++R   +  +++ +   + + HPL +          +LH+          M +L L F 
Sbjct: 411 TKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVLHLTFYYLMNLNIMTVLHLTFY 470

Query: 459 CLLKLNVICVGIE-------------GSHEGPENNILCNLFPDDTGLELPHQIVLHPAPL 518
            L+ LN++ V  +             G    P++ + C L+P D G + P     +PA  
Sbjct: 471 YLMNLNIMTVKTKVTTAAELTTAISAGDLLSPDSLLSC-LYPGDHGKKTP-----NPAN- 518

Query: 519 QLTFSRKKKVKSLISAKLVVGETLAFSDKRT--SRPYKWAQHLAGIDFLPELPP-LVSAQ 578
           Q  F +             VG  L  SD  T    PY W Q L G+ F  + P   V+A 
Sbjct: 531 QFQFDK-------------VG-ILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTAD 518

Query: 579 ESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPV 607
            S S                  + ++  ++ LR+R +++LAL +Q  SLE    PV
Sbjct: 591 NSLSA-----------------SHMEMTMKLLRTRLQSRLALHKQFASLEHGVVPV 518

[Close]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot
Match: Q13769 (THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-31
Identity = 145/577 (25.13%), Postives = 251/577 (43.50%), Query Frame = 0


Query: 39  YEMLRESKSSVEEIVTKMLSIKKHG--EPKTQLRELVTQMFLHFVTLRQANRSILLEEDR 98
           YE+ + +   ++ ++ ++  +K  G  +   ++ E   Q  +HF+TL++ NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 99  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQ 158
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ +I+LVS +EF+++AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171

Query: 159 DIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFST 218
           DI  +  +    H   L RLD+EL                                    
Sbjct: 172 DISKAEVTMGDPHQQTLARLDWEL------------------------------------ 231

Query: 219 FIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVIANRK 278
                                            QRK L ++  E   +K+ +L+ I  +K
Sbjct: 232 --------------------------------EQRKRLAEKYRECLSNKEKILKEIEVKK 291

Query: 279 KFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFG 338
           ++LSSL   L S+ +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A  
Sbjct: 292 EYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACD 351

Query: 339 ENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDDDGQR 398
           + + + I GSV +A+A  +   + +                      +D++  + ++ Q 
Sbjct: 352 KTLSVAIEGSVDEAKALFKPPEDSQ----------------------DDESDSDAEEEQT 411

Query: 399 RRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLLKLNVICV 458
            ++R   +  +++ +   + + HPL ++L +      + K   +L L F  L+ LN++ V
Sbjct: 412 TKRRRPTLGVQLDDKRKEMLKRHPLSVMLDL------KCKDDSVLHLTFYYLMNLNIMTV 471

Query: 459 GIE-------------GSHEGPENNILCNLFPDDTGLELPHQIVLHPAPLQLTFSRKKKV 518
             +             G    P++ + C L+P D G + P     +PA  Q  F  K  +
Sbjct: 472 KAKVTTAMELITPISAGDLLSPDSVLSC-LYPGDHGKKTP-----NPAN-QYQFD-KVGI 497

Query: 519 KSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIV 578
            +L    L +G            PY W Q L G+ F  E P           +TV +D  
Sbjct: 532 LTLSDYVLELG-----------HPYLWVQKLGGLHFPKEQPQ----------QTVIAD-- 497

Query: 579 SGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLE 601
             LS     + ++T ++ L++R +++LAL +Q  SLE
Sbjct: 592 HSLS----ASHMETTMKLLKTRVQSRLALHKQFASLE 497

[Close]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot
Match: Q68FX7 (THO complex subunit 5 homolog OS=Rattus norvegicus OX=10116 GN=Thoc5 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-30
Identity = 147/577 (25.48%), Postives = 247/577 (42.81%), Query Frame = 0


Query: 39  YEMLRESKSSVEEIVTKMLSIKKHG--EPKTQLRELVTQMFLHFVTLRQANRSILLEEDR 98
           YE+ + +   ++ ++ ++  +K  G  +   ++ E   Q  +HF+TL++ NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 99  VKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQ 158
            + +T  AK  VD   LQL NL+YE  H  K I  C +FKSK+ +I+LVS +EF+ +AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPP 171

Query: 159 DIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFST 218
           +I  +  +    H   L RLD+EL                                    
Sbjct: 172 NISKAEITMGDPHQQTLARLDWEL------------------------------------ 231

Query: 219 FIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVIANRK 278
                                            QRK L ++  E   +K+ +L+ I  +K
Sbjct: 232 --------------------------------EQRKRLAEKYRECLSNKEKILKEIEVKK 291

Query: 279 KFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFG 338
           ++LSSL   L S+ +ASLPVQ  L +   +  KQ++ A  LPPPLYV++ Q  A  +A  
Sbjct: 292 EYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACD 351

Query: 339 ENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDDDGQR 398
           + + + I GSV +A+A       K  E++                  +DD  D D + ++
Sbjct: 352 KTLSVAIEGSVDEAKALF-----KPPEDS------------------QDDESDSDAEEEQ 411

Query: 399 RRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLLKLNVICV 458
             +R   +  +++ +   + + HPL ++L +      + K   +L L F  L+ LN++ V
Sbjct: 412 TTRRRPTLGVQLDDKRKEMLKRHPLSVLLDL------KCKDNSVLHLTFFYLMNLNIMTV 471

Query: 459 GIE-------------GSHEGPENNILCNLFPDDTGLELPHQIVLHPAPLQLTFSRKKKV 518
             +             G    P++ + C L+P D G + P     +PA  Q  F  K  +
Sbjct: 472 KAKVTTAMELITPISAGDLLSPDSVLSC-LYPGDHGKKTP-----NPAN-QYQFD-KVGI 496

Query: 519 KSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIV 578
            +L    L +G            PY W Q L G+ F  E P            TV +D  
Sbjct: 532 LTLRDYVLELG-----------HPYLWVQKLGGLHFPKEQPQ----------HTVMADHS 496

Query: 579 SGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLE 601
              S       ++T ++ L++R +++LAL +Q  SLE
Sbjct: 592 QSAS------HMETTMKLLKTRVQSRLALHKQFASLE 496

[Close]

BLAST of Clc05G22170 vs. ExPASy TrEMBL
Match: A0A5A7VBI1 (THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00890 PE=3 SV=1)

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 771/918 (83.99%), Postives = 798/918 (86.93%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE  PLP DS+TGK+SP+EMLRESKS VE+IVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP++IKNSTRSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              G+S NAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GSSNNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NE CEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NEICEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPWVSHKPSCCLQGWSL+GYST+QASSLTT+EKEKVQDPVDVDMVGKSGISREE DSA
Sbjct: 601 DEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDSA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSST ILNN +VT LRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED
Sbjct: 661 REDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELM+D+DSD+D+PVQ E+AADDV S+PSNDITRK W+DYGSKEYCL++TRNTE PA+NL
Sbjct: 721 YELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDYGSKEYCLILTRNTEQPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEEN +ESDDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDWYNELRAMEAEVNLHILKMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQI CLAMLFNYCI EASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 818

[Close]

BLAST of Clc05G22170 vs. ExPASy TrEMBL
Match: A0A1S3BTI6 (THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1)

HSP 1 Score: 1477.2 bits (3823), Expect = 0.0e+00
Identity = 771/918 (83.99%), Postives = 798/918 (86.93%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE  PLP DS+TGK+SP+EMLRESKS VE+IVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP++IKNSTRSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              G+S NAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GSSNNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NE CEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NEICEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPWVSHKPSCCLQGWSL+GYST+QASSLTT+EKEKVQDPVDVDMVGKSGISREE DSA
Sbjct: 601 DEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDSA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSST ILNN +VT LRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED
Sbjct: 661 REDGELPALVSSTPILNNTEVTSLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELM+D+DSD+D+PVQ E+AADDV S+PSNDITRK W+DYGSKEYCL++TRNTE PA+NL
Sbjct: 721 YELMIDVDSDRDDPVQAELAADDVASVPSNDITRKKWIDYGSKEYCLILTRNTEQPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEEN +ESDDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEENCEESDDSDWYNELRAMEAEVNLHILKMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQI CLAMLFNYCI EASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQIRCLAMLFNYCISEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 818

[Close]

BLAST of Clc05G22170 vs. ExPASy TrEMBL
Match: A0A0A0KZS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1)

HSP 1 Score: 1464.1 bits (3789), Expect = 0.0e+00
Identity = 765/918 (83.33%), Postives = 793/918 (86.38%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EPLP DS+TGK+SP+EMLRESKS VE+IVTKMLSIKKHGE KTQL
Sbjct: 1   MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVK+ETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP++IKNS RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKK LLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGS+KDAQAFARHQANKET       
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKET------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GAS NAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASNNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           +ETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 SETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QES SGE VR DIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPWVSHKPSCCLQGWSL+GYST+QASSLTT+EKEKVQDPVDVDMVGKSGISREE DSA
Sbjct: 601 DEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQDPVDVDMVGKSGISREEIDSA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSST ILNN +V   RTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED
Sbjct: 661 REDGELPALVSSTPILNNPEV---RTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELM+D+DSDQD+PVQ E+AADDV S+PSN+IT K W+DYGSKEYCL++TRNTE P +NL
Sbjct: 721 YELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDYGSKEYCLILTRNTERPTKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPPVFTLNLYTMNSEENR+E DDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRPPVFTLNLYTMNSEENREECDDSDWYNELRAMEAEVNLHILKMLP 815

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCLAMLFNYCI EASL SERRKSSSVID+GLCKPVSGSLHARSFRGRD
Sbjct: 841 LDQENYILSHQICCLAMLFNYCISEASLFSERRKSSSVIDIGLCKPVSGSLHARSFRGRD 815

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIECTPGYPC
Sbjct: 901 RRKMISWKDIECTPGYPC 815

[Close]

BLAST of Clc05G22170 vs. ExPASy TrEMBL
Match: A0A6J1J206 (THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1)

HSP 1 Score: 1456.8 bits (3770), Expect = 0.0e+00
Identity = 761/918 (82.90%), Postives = 792/918 (86.27%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EP P +S+TGK+SPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFFRDAP+DIKNS RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANK+        
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDA------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GASTN ES+KLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NETCEPKSMKLLSLKFECL KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                             SAKLVV ETL+FSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------SAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPW SHKPSC LQGWSL+GY+T Q SSL  +EKEKV+DP+DVDM+GKSGISRE+ D A
Sbjct: 601 DNVPWASHKPSCSLQGWSLVGYATSQESSLNIMEKEKVRDPLDVDMLGKSGISREDIDGA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSSTSIL+NAQ TPLRTPNLEHSKQLTLISKSITPQTNYSRMLSF+KHDED
Sbjct: 661 REDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFSKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELMLD+DSDQDEP+QTE+AADDV SIPSNDITRKTW+DYGSKEYCLV+TRNT+ PA+NL
Sbjct: 721 YELMLDVDSDQDEPMQTELAADDVASIPSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLRPP FTLNLYT+NSEENRDESDDS+WYNELRAMEAEVNLHIL MLP
Sbjct: 781 KLQAKIKISMEYPLRPPFFTLNLYTINSEENRDESDDSDWYNELRAMEAEVNLHILNMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCL MLFNYCI EAS SSER+KSS VIDVGLCKPVSGS+HARSFRGRD
Sbjct: 841 LDQENYILSHQICCLEMLFNYCINEASRSSERKKSSFVIDVGLCKPVSGSIHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIEC PGYPC
Sbjct: 901 RRKMISWKDIECAPGYPC 818

[Close]

BLAST of Clc05G22170 vs. ExPASy TrEMBL
Match: A0A6J1FJR5 (THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1)

HSP 1 Score: 1450.3 bits (3753), Expect = 0.0e+00
Identity = 758/918 (82.57%), Postives = 790/918 (86.06%), Query Frame = 0


Query: 10  MDEEIEEGMLIEDEPEPLPSDSDTGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 69
           MDEEIEEGMLIEDE EP P +S+TGK+SPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL
Sbjct: 1   MDEEIEEGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQL 60

Query: 70  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 129
           RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI
Sbjct: 61  RELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAI 120

Query: 130 KACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCK 189
           KACKDFKSKYPDIELVSEDEFF+DAP+DIK S RSKDSAHNLMLQRLDYELF        
Sbjct: 121 KACKDFKSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELF-------- 180

Query: 190 LTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFY 249
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 250 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLK 309
           QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLG+LQTKKLK
Sbjct: 241 QRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLK 300

Query: 310 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKETENNIAIA 369
           QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANK+        
Sbjct: 301 QHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDA------- 360

Query: 370 NILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 429
              GASTN ES+KLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD
Sbjct: 361 ---GASTNVESSKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYD 420

Query: 430 NETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLH 489
           NETCEPKSMKLLSLKFECL KLN+ICVGIEGSHEGPENNILCNLFPDDTGLELPHQ    
Sbjct: 421 NETCEPKSMKLLSLKFECLSKLNIICVGIEGSHEGPENNILCNLFPDDTGLELPHQ---- 480

Query: 490 PAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 549
                              AKLVV ETL+FSDKRTSRPYKWAQHLAGIDFLPELPPLVSA
Sbjct: 481 ------------------PAKLVVRETLSFSDKRTSRPYKWAQHLAGIDFLPELPPLVSA 540

Query: 550 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 609
           QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC
Sbjct: 541 QESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEKLKWPVLTC 600

Query: 610 DDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGISREETDSA 669
           D+VPW SHKPSC LQGWSL+GY+  Q SSLT +EKEKV+DP+DVDM+GKSGISRE+ D A
Sbjct: 601 DNVPWASHKPSCSLQGWSLVGYAASQESSLTIMEKEKVRDPLDVDMLGKSGISREDIDGA 660

Query: 670 REDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFNKHDED 729
           REDGELPALVSSTSIL+NAQ TPLRTPNLEHSKQLTLISKSITPQTNYSRMLSF+KHDED
Sbjct: 661 REDGELPALVSSTSILDNAQPTPLRTPNLEHSKQLTLISKSITPQTNYSRMLSFSKHDED 720

Query: 730 YELMLDLDSDQDEPVQTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITRNTEPPAQNL 789
           YELMLD+DSDQDEP+QTE+AADDV S PSNDITRKTW+DYGSKEYCLV+TRNT+ PA+NL
Sbjct: 721 YELMLDVDSDQDEPMQTELAADDVASTPSNDITRKTWMDYGSKEYCLVMTRNTDSPAKNL 780

Query: 790 KLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEVNLHILKMLP 849
           KLQAK+KISMEYPLR P FTLNLYT+NSEENRDESDDS+WYNELRAMEAEVNLHILKMLP
Sbjct: 781 KLQAKIKISMEYPLRSPFFTLNLYTINSEENRDESDDSDWYNELRAMEAEVNLHILKMLP 818

Query: 850 LDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSLHARSFRGRD 909
           LDQENYILSHQICCL MLFNYCI EAS SSER+KSSSVIDVGLCKPVSGS+HARSFRGRD
Sbjct: 841 LDQENYILSHQICCLEMLFNYCISEASRSSERKKSSSVIDVGLCKPVSGSIHARSFRGRD 818

Query: 910 RRKMISWKDIECTPGYPC 928
           RRKMISWKDIEC PGYPC
Sbjct: 901 RRKMISWKDIECAPGYPC 818

[Close]

BLAST of Clc05G22170 vs. TAIR 10
Match: AT5G42920.2 (THO complex, subunit 5 )

HSP 1 Score: 884.4 bits (2284), Expect = 7.9e-257
Identity = 495/927 (53.40%), Postives = 632/927 (68.18%), Query Frame = 0


Query: 11  DEEIEEGMLIEDE-PEPLPSDSDT-------GKMSPYEMLRESKSSVEEIVTKMLSIKKH 70
           D EIEEGM+  DE P P  +  +T       GK SP E+LRESK+SVEEIV KMLS+KK 
Sbjct: 3   DGEIEEGMVTADEFPTPEVTTIETIQPPREPGK-SPLELLRESKTSVEEIVAKMLSMKKQ 62

Query: 71  GEPKTQLRELVTQMFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEK 130
           G  K+++REL+TQMFL+FV LRQANR+IL EED+VKAETERAKAPVDFTTLQL+NLMYEK
Sbjct: 63  GNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEK 122

Query: 131 SHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDYELFQ 190
           SHYVKAIKAC+DFKSKYPDI+LV E +FFR AP+ IK+ + S DS+H LM +RL++EL  
Sbjct: 123 SHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFEL-- 182

Query: 191 ILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLLLLSL 250
                                                                       
Sbjct: 183 ------------------------------------------------------------ 242

Query: 251 LIYPSFYQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGI 310
                 +QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN LGI
Sbjct: 243 ------HQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGI 302

Query: 311 LQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKET 370
             TKKLKQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+ K++
Sbjct: 303 QHTKKLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDS 362

Query: 371 ENNIAIANILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLK 430
                     G S+N ES++LEDD PD+DDDGQRRRKRPKK+ +K   + AG+YQVHPLK
Sbjct: 363 ----------GMSSNTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLK 422

Query: 431 IILHIYDNETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDTGLEL 490
           I+LHIYD+E  + KS+KL+ LKFE LLKLNV+CVG EGS +GPE NI CNLFPDD GLE 
Sbjct: 423 IVLHIYDDEIPDTKSLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEP 482

Query: 491 PHQIVLHPAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGIDFLPE 550
           PHQ                      S KL++G+   F + RTSRPYKW QHLAGID    
Sbjct: 483 PHQ----------------------STKLILGDGQTFDENRTSRPYKWVQHLAGID---- 542

Query: 551 LPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLDSLEK 610
           + P++  QE+ + +  +SD  V  LS+YRQQ+R+QTV++R+R RKKA LAL EQLD L K
Sbjct: 543 ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKKAHLALAEQLDLLMK 602

Query: 611 LKWPVLTCDDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVGKSGI 670
            + PV+ C+D PW  HK  C L  W  I  S  ++ SLT    E+V +P+++D+ G+S  
Sbjct: 603 HELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQVPEPMEIDVDGRSIS 662

Query: 671 SREETDSAREDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNYSRML 730
            +E+ +S REDGELP+LV++ + L ++  TP +  N   S+QL L++K++    +  +  
Sbjct: 663 GKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQARSRQLALMTKNLDSPISKGKSP 722

Query: 731 SFNKHDEDYELMLDLDSDQDEPV-QTEVAADDVVSIPSNDITRKTWVDYGSKEYCLVITR 790
           SF K+++D +L+LD DS+ DEP  +TE   +++    +++    +WVDYGS+E+ LV +R
Sbjct: 723 SFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKADN----SWVDYGSREFALVFSR 782

Query: 791 NTEPPAQNLKLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAMEAEV 850
            T+   +  KL+A V+ISMEYPLRPP+F+L+L+  +S  N + +++S+ YNELRAMEAEV
Sbjct: 783 KTD-GGKLWKLEAMVQISMEYPLRPPLFSLSLHASSSSGNENGTNESDHYNELRAMEAEV 819

Query: 851 NLHILKMLPLDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPVSGSL 910
           NLH+LK++P DQENY+LSHQI CLAMLF+Y + + S  S+R  +++V+DVGLCKPV G L
Sbjct: 843 NLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPDSKRGTATTVVDVGLCKPVDGKL 819

Query: 911 HARSFRGRDRRKMISWKDIECTPGYPC 928
             RSFRGRD RKMISWK   C  GYPC
Sbjct: 903 LVRSFRGRDHRKMISWKGRGCASGYPC 819

[Close]

BLAST of Clc05G22170 vs. TAIR 10
Match: AT5G42920.1 (THO complex, subunit 5 )

HSP 1 Score: 759.2 bits (1959), Expect = 3.8e-219
Identity = 417/811 (51.42%), Postives = 540/811 (66.58%), Query Frame = 0


Query: 119 MYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFRDAPQDIKNSTRSKDSAHNLMLQRLDY 178
           MYEKSHYVKAIKAC+DFKSKYPDI+LV E +FFR AP+ IK+ + S DS+H LM +RL++
Sbjct: 1   MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60

Query: 179 ELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMFLFSTFIDVDVHCRFFLFSENVFFSLL 238
           EL                                                          
Sbjct: 61  EL---------------------------------------------------------- 120

Query: 239 LLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQN 298
                     +QRKELCK R  LEQ KKSLLE IA RKKFLSSLP HLKSLKKASLPVQN
Sbjct: 121 ----------HQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQN 180

Query: 299 QLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQA 358
            LGI  TKKLKQH LAELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+AR Q+
Sbjct: 181 HLGIQHTKKLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQS 240

Query: 359 NKETENNIAIANILGASTNAESNKLEDDAPDEDDDGQRRRKRPKKIPAKVNIEHAGIYQV 418
            K++          G S+N ES++LEDD PD+DDDGQRRRKRPKK+ +K   + AG+YQV
Sbjct: 241 RKDS----------GMSSNTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQV 300

Query: 419 HPLKIILHIYDNETCEPKSMKLLSLKFECLLKLNVICVGIEGSHEGPENNILCNLFPDDT 478
           HPLKI+LHIYD+E  + KS+KL+ LKFE LLKLNV+CVG EGS +GPE NI CNLFPDD 
Sbjct: 301 HPLKIVLHIYDDEIPDTKSLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDA 360

Query: 479 GLELPHQIVLHPAPLQLTFSRKKKVKSLISAKLVVGETLAFSDKRTSRPYKWAQHLAGID 538
           GLE PHQ                      S KL++G+   F + RTSRPYKW QHLAGID
Sbjct: 361 GLEPPHQ----------------------STKLILGDGQTFDENRTSRPYKWVQHLAGID 420

Query: 539 FLPELPPLVSAQESASGETVRSD-IVSGLSMYRQQNRIQTVVQRLRSRKKAQLALVEQLD 598
               + P++  QE+ + +  +SD  V  LS+YRQQ+R+QTV++R+R RKKA LAL EQLD
Sbjct: 421 ----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKKAHLALAEQLD 480

Query: 599 SLEKLKWPVLTCDDVPWVSHKPSCCLQGWSLIGYSTRQASSLTTIEKEKVQDPVDVDMVG 658
            L K + PV+ C+D PW  HK  C L  W  I  S  ++ SLT    E+V +P+++D+ G
Sbjct: 481 LLMKHELPVVNCEDAPWALHKVLCALDSWLHIQSSASKSCSLTLNSVEQVPEPMEIDVDG 540

Query: 659 KSGISREETDSAREDGELPALVSSTSILNNAQVTPLRTPNLEHSKQLTLISKSITPQTNY 718
           +S   +E+ +S REDGELP+LV++ + L ++  TP +  N   S+QL L++K++    + 
Sbjct: 541 RSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSNQARSRQLALMTKNLDSPISK 600

Query: 719 SRMLSFNKHDEDYELMLDLDSDQDEPV-QTEVAADDVVSIPSNDITRKTWVDYGSKEYCL 778
            +  SF K+++D +L+LD DS+ DEP  +TE   +++    +++    +WVDYGS+E+ L
Sbjct: 601 GKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAHVEELCPEKADN----SWVDYGSREFAL 660

Query: 779 VITRNTEPPAQNLKLQAKVKISMEYPLRPPVFTLNLYTMNSEENRDESDDSNWYNELRAM 838
           V +R T+   +  KL+A V+ISMEYPLRPP+F+L+L+  +S  N + +++S+ YNELRAM
Sbjct: 661 VFSRKTD-GGKLWKLEAMVQISMEYPLRPPLFSLSLHASSSSGNENGTNESDHYNELRAM 702

Query: 839 EAEVNLHILKMLPLDQENYILSHQICCLAMLFNYCIGEASLSSERRKSSSVIDVGLCKPV 898
           EAEVNLH+LK++P DQENY+LSHQI CLAMLF+Y + + S  S+R  +++V+DVGLCKPV
Sbjct: 721 EAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPDSKRGTATTVVDVGLCKPV 702

Query: 899 SGSLHARSFRGRDRRKMISWKDIECTPGYPC 928
            G L  RSFRGRD RKMISWK   C  GYPC
Sbjct: 781 DGKLLVRSFRGRDHRKMISWKGRGCASGYPC 702

[Close]

BLAST of Clc05G22170 vs. TAIR 10
Match: AT1G45233.2 (THO complex, subunit 5 )

HSP 1 Score: 479.9 bits (1234), Expect = 4.5e-135
Identity = 280/561 (49.91%), Postives = 353/561 (62.92%), Query Frame = 0


Query: 33  TGKMSPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQMFLHFVTLRQANRSILL 92
           T + SP E+L+++K+SVE I+ KMLSIK+ G PK++ REL+TQMFL+F+ LRQANRSIL+
Sbjct: 12  TAEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILI 71

Query: 93  EEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDFKSKYPDIELVSEDEFFR 152
           EE++V+ ETE AK+PVDFTTL+L+NLMYEKSHY+KA KA +DFKS+YP+I+L+SE +FF 
Sbjct: 72  EEEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFS 131

Query: 153 DAPQDIKNSTRSKDSAHNLMLQRLDYELFQILNYDCKLTSYLSLNLSLFRMGACMMFSMF 212
           DAP+ IK+ T S DS+H+LML+RL++EL                                
Sbjct: 132 DAPEAIKSQTLSNDSSHDLMLKRLNFEL-------------------------------- 191

Query: 213 LFSTFIDVDVHCRFFLFSENVFFSLLLLSLLIYPSFYQRKELCKRRDELEQHKKSLLEVI 272
                                               +QRKELCK R  LEQ KKSLLE  
Sbjct: 192 ------------------------------------HQRKELCKLRVRLEQQKKSLLESN 251

Query: 273 ANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYVIYSQFLAQK 332
           A R KFLSSLP HLKSLKKASLPVQ+QL +   KKLK H LAELLPPPLYVIYSQF+A K
Sbjct: 252 AERNKFLSSLPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALK 311

Query: 333 EAFGENIELEIVGSVKDAQAFARHQANKETENNIAIANILGASTNAESNKLEDDAPDEDD 392
           EAF ENI++E+ GS+KDAQ +AR QA +                N+ES +LE        
Sbjct: 312 EAFEENIDVEVSGSLKDAQTYARQQAEQ----------------NSESLRLEVGV----- 371

Query: 393 DGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLLKLN 452
           D +R+RKR K    KV  +  G+YQVHPLK++LH+YD+E  +PKS +L+ LKFE LLKLN
Sbjct: 372 DEERQRKRLK----KVGSDEGGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLN 431

Query: 453 VICVGIEGSHEGPENNILCNLFPDDTGLELPHQIVLHPAPLQLTFSRKKKVKSLISAKLV 512
           V+CVGIE S +G E NILCNLFPDD+GLE PHQ                      SAKL+
Sbjct: 432 VVCVGIEESEDGLEKNILCNLFPDDSGLEPPHQ----------------------SAKLI 452

Query: 513 VGETLAFSDKRTSRPYKWAQHLAGIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQ 572
           +G    F   RTSRPYKWAQHLAGI+ LPE+ P  + +     +   SD   G +     
Sbjct: 492 LGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDK-----DIQYSDTAKGYASASDH 452

Query: 573 NRIQTVVQRLRSRKKAQLALV 594
             +QTV+QR+RS+KK +L LV
Sbjct: 552 RNVQTVLQRIRSQKKTKLTLV 452

The following BLAST results are available for this feature:

BLAST of Clc05G22170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452557.1	0.0e+00	83.99	PREDICTED: THO complex subunit 5B [Cucumis melo] >KAA0064387.1 THO complex subun...	[more]
XP_038897136.1	0.0e+00	84.64	THO complex subunit 5B [Benincasa hispida]	[more]
XP_004141378.1	0.0e+00	83.33	THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_01...	[more]
XP_022982205.1	0.0e+00	82.90	THO complex subunit 5B [Cucurbita maxima]	[more]
KAG7037799.1	0.0e+00	82.90	THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc05G22170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4J0	1.1e-255	53.40	THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1	[more]
F4HRC1	6.3e-134	49.91	THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1	[more]
Q5ZJK1	1.2e-31	25.17	THO complex subunit 5 homolog OS=Gallus gallus OX=9031 GN=THOC5 PE=2 SV=1	[more]
Q13769	2.6e-31	25.13	THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2	[more]
Q68FX7	1.0e-30	25.48	THO complex subunit 5 homolog OS=Rattus norvegicus OX=10116 GN=Thoc5 PE=2 SV=1	[more]

BLAST of Clc05G22170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBI1	0.0e+00	83.99	THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3BTI6	0.0e+00	83.99	THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1	[more]
A0A0A0KZS2	0.0e+00	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1	[more]
A0A6J1J206	0.0e+00	82.90	THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1	[more]
A0A6J1FJR5	0.0e+00	82.57	THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1	[more]

BLAST of Clc05G22170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42920.2	7.9e-257	53.40	THO complex, subunit 5	[more]
AT5G42920.1	3.8e-219	51.42	THO complex, subunit 5	[more]
AT1G45233.2	4.5e-135	49.91	THO complex, subunit 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..403
IPR019163	THO complex, subunit 5	PFAM	PF09766	FmiP_Thoc5	coord: 82..182 e-value: 5.6E-33 score: 114.7 coord: 249..539 e-value: 2.8E-64 score: 217.7
IPR019163	THO complex, subunit 5	PANTHER	PTHR13375	FMS INTERACTING PROTEIN	coord: 31..182 coord: 248..925

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G22170.2	Clc05G22170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
cellular_component	GO:0000445	THO complex part of transcription export complex
molecular_function	GO:0003729	mRNA binding